AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27963

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27963.t1 MTR_8g089260 94.928 1045 47 1 1 1039 1 1045 0.0 1982
MS.gene27963.t1 MTR_2g047130 60.539 1039 348 14 2 1036 18 998 0.0 1165
MS.gene27963.t1 MTR_2g047130 60.539 1039 348 14 2 1036 21 1001 0.0 1165
MS.gene27963.t1 MTR_1g078070 56.738 564 237 2 14 574 131 690 0.0 669
MS.gene27963.t1 MTR_1g078070 33.824 136 69 4 732 855 941 1067 1.73e-14 79.0
MS.gene27963.t1 MTR_1g078070 56.738 564 237 2 14 574 131 690 0.0 669
MS.gene27963.t1 MTR_1g078070 30.696 316 179 5 732 1036 941 1227 3.25e-40 162
MS.gene27963.t1 MTR_7g097070 42.957 575 312 7 15 575 99 671 7.18e-149 464
MS.gene27963.t1 MTR_5g010300 38.739 444 227 5 136 568 288 697 3.26e-86 306
MS.gene27963.t1 MTR_5g010300 50.000 74 33 1 28 101 23 92 3.77e-14 78.2
MS.gene27963.t1 MTR_5g010300 38.739 444 227 5 136 568 288 697 4.68e-86 305
MS.gene27963.t1 MTR_5g010300 50.000 74 33 1 28 101 23 92 3.47e-14 78.2
MS.gene27963.t1 MTR_5g010300 38.739 444 227 5 136 568 288 697 5.18e-86 305
MS.gene27963.t1 MTR_5g010300 50.000 74 33 1 28 101 23 92 3.49e-14 78.2
MS.gene27963.t1 MTR_5g010300 40.050 397 194 4 136 521 288 651 5.82e-80 287
MS.gene27963.t1 MTR_5g010300 50.000 74 33 1 28 101 23 92 4.18e-14 77.8
MS.gene27963.t1 MTR_5g029370 37.376 404 172 11 30 421 86 420 8.65e-61 224
MS.gene27963.t1 MTR_5g029370 37.376 404 172 11 30 421 86 420 8.65e-61 224
MS.gene27963.t1 MTR_1g038400 36.693 387 172 9 29 407 24 345 1.09e-55 204
MS.gene27963.t1 MTR_3g075210 34.988 403 191 10 33 425 18 359 1.22e-52 202
MS.gene27963.t1 MTR_1g038370 38.538 301 145 8 119 407 33 305 8.50e-47 177
MS.gene27963.t1 MTR_1g094740 39.367 221 124 3 229 439 272 492 7.01e-41 164
MS.gene27963.t1 MTR_7g407000 44.928 138 51 4 275 404 33 153 3.01e-27 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27963.t1 AT1G08620 44.144 999 481 15 14 936 127 1124 0.0 775
MS.gene27963.t1 AT1G08620 44.144 999 481 15 14 936 127 1124 0.0 775
MS.gene27963.t1 AT1G08620 44.144 999 481 15 14 936 127 1124 0.0 775
MS.gene27963.t1 AT1G08620 44.044 999 482 15 14 936 141 1138 0.0 774
MS.gene27963.t1 AT4G20400 59.612 567 224 3 2 566 25 588 0.0 718
MS.gene27963.t1 AT4G20400 41.772 237 106 3 803 1035 743 951 6.55e-46 179
MS.gene27963.t1 AT1G30810 62.413 572 205 5 2 570 28 592 0.0 706
MS.gene27963.t1 AT1G30810 51.351 185 77 3 790 974 648 819 2.05e-49 189
MS.gene27963.t1 AT1G30810 62.413 572 205 5 2 570 28 592 0.0 706
MS.gene27963.t1 AT1G30810 51.351 185 77 3 790 974 648 819 2.05e-49 189
MS.gene27963.t1 AT1G30810 62.413 572 205 5 2 570 28 592 0.0 706
MS.gene27963.t1 AT1G30810 51.351 185 77 3 790 974 648 819 2.05e-49 189
MS.gene27963.t1 AT2G34880 59.825 570 202 10 5 566 33 583 0.0 687
MS.gene27963.t1 AT2G34880 46.734 199 95 3 775 973 618 805 2.68e-43 170
MS.gene27963.t1 AT4G20400 60.227 528 205 3 41 566 7 531 0.0 669
MS.gene27963.t1 AT4G20400 41.772 237 106 3 803 1035 686 894 8.29e-46 179
MS.gene27963.t1 AT2G38950 41.856 528 279 4 29 556 104 603 5.33e-135 424
MS.gene27963.t1 AT1G63490 40.898 423 206 6 142 554 38 426 2.09e-90 315
MS.gene27963.t1 AT1G63490 40.898 423 206 6 142 554 291 679 1.41e-89 315
MS.gene27963.t1 AT1G63490 54.412 68 27 1 34 101 32 95 1.35e-13 76.3
MS.gene27963.t1 AT1G63490 40.898 423 206 6 142 554 291 679 1.51e-89 315
MS.gene27963.t1 AT1G63490 54.412 68 27 1 34 101 32 95 1.35e-13 76.3
MS.gene27963.t1 AT5G46910 34.592 503 239 16 32 523 102 525 2.03e-62 225
MS.gene27963.t1 AT5G46910 34.394 503 240 15 32 523 102 525 4.50e-62 227
MS.gene27963.t1 AT5G04240 31.746 441 237 11 33 422 16 443 3.14e-46 181
MS.gene27963.t1 AT3G48430 32.126 414 208 11 33 422 20 384 6.31e-42 168
MS.gene27963.t1 AT1G63490 38.655 238 123 4 322 554 1 220 7.16e-41 164

Find 230 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATGATAAGTTGTTATT+TGG 0.119436 4.4:+11959720 MS.gene27963:CDS
TATCGCACTGTCCAGCATTC+TGG 0.177670 4.4:+11959543 MS.gene27963:CDS
GTCATTCCTGCTGGATTTCT+TGG 0.180288 4.4:+11961242 MS.gene27963:CDS
AAAATCTAAAATGTTTAAAT+TGG 0.189270 4.4:+11959796 MS.gene27963:CDS
TCTAGAAAGATTCCTGAAAA+AGG 0.206821 4.4:+11961968 MS.gene27963:CDS
ATCACTACCTTTACCATCTT+TGG 0.219822 4.4:-11958167 None:intergenic
CTGCAAATGCACTCAGATTT+AGG 0.254376 4.4:+11960876 MS.gene27963:CDS
CGATTTCTGTAGGTGTATTA+TGG 0.257794 4.4:+11958351 MS.gene27963:intron
ACACTTATTGTGACGGATTT+CGG 0.268838 4.4:-11960688 None:intergenic
TTCGGTTGAGCTTGTTAGTT+TGG 0.273455 4.4:+11960998 MS.gene27963:CDS
AGTTCTTTGTATTTGAATAT+TGG 0.274068 4.4:+11960624 MS.gene27963:CDS
CCTTTCGCCATCCATTATTC+AGG 0.275215 4.4:+11961593 MS.gene27963:CDS
TCTGAATCTGATGATAAGTT+TGG 0.276549 4.4:+11958058 MS.gene27963:CDS
CTCAAAGAATTTCAGCAATA+TGG 0.283663 4.4:+11958106 MS.gene27963:CDS
GGTACACCATACCATACTTT+TGG 0.284346 4.4:-11959122 None:intergenic
CAAGTTAATTCTGGATCTTC+AGG 0.284422 4.4:+11961795 MS.gene27963:CDS
AATAACTTTGCGCGACTTCC+AGG 0.284607 4.4:+11958474 MS.gene27963:CDS
AAATTGTCCCTCCAGCTTGC+TGG 0.294266 4.4:+11957834 MS.gene27963:CDS
ATCAATGGTCATAAAATGTT+TGG 0.302237 4.4:+11961567 MS.gene27963:CDS
CATATCTCTTTCTCCTTAAG+AGG 0.303958 4.4:-11957869 None:intergenic
CATCAATCCACAACACAAAA+AGG 0.310969 4.4:+11957404 MS.gene27963:CDS
ACCAACTCGTTGAGTAGATT+TGG 0.312207 4.4:-11959212 None:intergenic
AATCACAAACAAGTTAATTC+TGG 0.322127 4.4:+11961786 MS.gene27963:CDS
TGTGGATCTGACTGGTGATA+TGG 0.338493 4.4:+11960545 MS.gene27963:CDS
CCAACTAATGTTCGAAATTC+CGG 0.341000 4.4:+11960819 MS.gene27963:CDS
ACAGGTGTTTCACCGATTAT+AGG 0.342856 4.4:-11957634 None:intergenic
CGAGAGACGTCAACCGTCTT+TGG 0.347777 4.4:+11958201 MS.gene27963:CDS
AATGGATAAAAGATTTGTTC+TGG 0.348982 4.4:+11960215 MS.gene27963:CDS
AGTTTGCATTACCTGAATAA+TGG 0.351329 4.4:-11961604 None:intergenic
CGAAATTCCGGTACACTTGA+TGG 0.353346 4.4:+11960831 MS.gene27963:CDS
CCGGAATTTCGAACATTAGT+TGG 0.354395 4.4:-11960819 None:intergenic
CAAAGATGGGAACGTGTAAT+AGG 0.357690 4.4:+11957999 MS.gene27963:CDS
GATAAGTTTGGATTCCAATC+AGG 0.359070 4.4:+11958070 MS.gene27963:CDS
GGCTCCACCTTGCCCTCTTA+AGG 0.362816 4.4:+11957856 MS.gene27963:CDS
TGCTGGTGGTATTTCTGTCT+TGG 0.365569 4.4:+11960776 MS.gene27963:CDS
CTAAGACAAGAATAGTTATC+AGG 0.379211 4.4:-11960165 None:intergenic
TATGGAGCTGACTTGGAAAC+TGG 0.379640 4.4:+11958369 MS.gene27963:CDS
GGTTGCTCTTCAAACAAATC+AGG 0.381453 4.4:-11959191 None:intergenic
CAATAAAGTTAAGGAGGATA+AGG 0.382232 4.4:+11960599 MS.gene27963:CDS
TGTCAAAGATATATTTGTAT+TGG 0.383264 4.4:-11960943 None:intergenic
TCAGTTAAGGATGATGTCTT+AGG 0.384378 4.4:-11958411 None:intergenic
CTTTCAGAGACAACTCTTCA+TGG 0.388357 4.4:+11959768 MS.gene27963:CDS
TCGGTTGAGCTTGTTAGTTT+GGG 0.393615 4.4:+11960999 MS.gene27963:CDS
TTCAGCATCTTTAAATGATC+CGG 0.400591 4.4:-11960051 None:intergenic
ATCGCACTGTCCAGCATTCT+GGG 0.402356 4.4:+11959544 MS.gene27963:CDS
GCAAATCAACTTGCTGAATA+CGG 0.404788 4.4:-11957913 None:intergenic
ACTGGGGTGACCCAAAAGTA+TGG 0.405240 4.4:+11959111 MS.gene27963:CDS
TCCTCAGACTTAAGTATTGA+AGG 0.408574 4.4:-11959510 None:intergenic
CTCTTAAGGAGAAAGAGATA+TGG 0.410495 4.4:+11957870 MS.gene27963:CDS
ATTCACTTAATTATCTGCAC+TGG 0.413564 4.4:+11959093 MS.gene27963:CDS
TGTTCTTACCAATGCAGTTA+AGG 0.414403 4.4:+11959842 MS.gene27963:CDS
ATCCAAATAACAACTTATCA+TGG 0.414820 4.4:-11959722 None:intergenic
ACATTGGTTGAAGCATTAGA+AGG 0.417317 4.4:+11960264 MS.gene27963:CDS
CTTGATGGTTGTAAATTGTT+TGG 0.418077 4.4:+11960846 MS.gene27963:CDS
ACTGGGATCTTGAGCTTCAA+TGG 0.419115 4.4:-11961742 None:intergenic
AAATATATTCCAGGTTACTT+TGG 0.419381 4.4:+11961404 MS.gene27963:intron
CAAAGATATATTTGTATTGG+AGG 0.424188 4.4:-11960940 None:intergenic
GAAGCATGTCGGCCTATAAT+CGG 0.425042 4.4:+11957622 MS.gene27963:CDS
CTTCGATTCGGTTGAGGAAA+GGG 0.427057 4.4:+11960086 MS.gene27963:CDS
TCAGATTTGTATGCTATGTC+TGG 0.427067 4.4:+11958441 MS.gene27963:CDS
AGAGAGGCTTGAATGGCTTC+CGG 0.431090 4.4:+11960032 MS.gene27963:CDS
ACATAGTTACAGATGCTTGA+TGG 0.431354 4.4:-11961212 None:intergenic
ATCTGAATCACTCTCAGTTA+AGG 0.431446 4.4:-11958424 None:intergenic
AATTGTCCCTCCAGCTTGCT+GGG 0.433006 4.4:+11957835 MS.gene27963:CDS
ATATTTAGCAAAGAATTTGC+AGG 0.436457 4.4:-11960663 None:intergenic
GTTTGTGAAGTCATTCCTGC+TGG 0.436870 4.4:+11961233 MS.gene27963:CDS
TGCTTCGACTGGATCCCATC+TGG 0.438506 4.4:-11957605 None:intergenic
CTTAATAGTATGCTTGAAAC+GGG 0.448898 4.4:+11960906 MS.gene27963:CDS
GACTTGGAAACTGGAGCACT+TGG 0.449548 4.4:+11958378 MS.gene27963:CDS
AGTTTGGGATCTGTTGTGTA+TGG 0.451056 4.4:+11961014 MS.gene27963:CDS
TTGCATGCACGAACAAGATA+TGG 0.452082 4.4:+11960356 MS.gene27963:CDS
GGTCATGGACAATAAAGTTA+AGG 0.453833 4.4:+11960590 MS.gene27963:CDS
GGAACGTGTAATAGGAGAAC+TGG 0.458459 4.4:+11958007 MS.gene27963:CDS
GTGTTTGTGAAAACCTCGTT+GGG 0.459982 4.4:-11961435 None:intergenic
AATAAAGTTAAGGAGGATAA+GGG 0.464006 4.4:+11960600 MS.gene27963:CDS
CAAGGTGGAGCCCAGCAAGC+TGG 0.465917 4.4:-11957845 None:intergenic
GACTTGCACCTCTCTGCTGT+TGG 0.469090 4.4:+11960129 MS.gene27963:CDS
AATCATTACCTTAACTGCAT+TGG 0.469539 4.4:-11959850 None:intergenic
GTCATGAATGTGTAGGGTAC+TGG 0.470928 4.4:+11961763 MS.gene27963:CDS
TGGTGTCGATTTGATAAAGC+TGG 0.472194 4.4:+11961893 MS.gene27963:CDS
AAAAGATCGCCTTCTTGTAC+AGG 0.472566 4.4:+11960417 MS.gene27963:CDS
AATTCTTTGAGTGTGAAGTC+TGG 0.473727 4.4:-11958094 None:intergenic
CGCATTGCTCGTAACTCGTC+AGG 0.474777 4.4:-11961996 None:intergenic
GAAACTGGAGCACTTGGAAG+TGG 0.475135 4.4:+11958384 MS.gene27963:CDS
AGGATATTGAAGGTGAATAC+TGG 0.475212 4.4:+11958224 MS.gene27963:CDS
AAAGTATGGTATGGTGTACC+TGG 0.475229 4.4:+11959125 MS.gene27963:CDS
CCATGCATAAACCAATCATA+TGG 0.479121 4.4:-11959648 None:intergenic
TCTTAAGGAGAAAGAGATAT+GGG 0.479506 4.4:+11957871 MS.gene27963:CDS
ACTTAATAGTATGCTTGAAA+CGG 0.483422 4.4:+11960905 MS.gene27963:CDS
TTTGAAGGAAGTGACATCTC+AGG 0.484096 4.4:+11958510 MS.gene27963:CDS
CAATGACTTCGATTCGGTTG+AGG 0.485568 4.4:+11960080 MS.gene27963:CDS
ACACTTCAGCAGATAAGTGC+TGG 0.487268 4.4:+11961454 MS.gene27963:CDS
TTCACTTAATTATCTGCACT+GGG 0.487394 4.4:+11959094 MS.gene27963:CDS
TGAATGTGGCTCCATATGAT+TGG 0.492536 4.4:+11959637 MS.gene27963:CDS
CCGTCTTTGGAGGATATTGA+AGG 0.497427 4.4:+11958214 MS.gene27963:CDS
AGCCGATGAGGAAGAAAAGT+AGG 0.498687 4.4:+11957948 MS.gene27963:CDS
CAGTCACATTTCTTCAGAGT+TGG 0.502183 4.4:+11960482 MS.gene27963:CDS
TTGACAGACAAGGATAATGA+TGG 0.505126 4.4:+11960005 MS.gene27963:intron
AATTTGTTATCACGTTTCCA+AGG 0.505646 4.4:+11959568 MS.gene27963:CDS
TAACAAATTCCCCAGAATGC+TGG 0.506467 4.4:-11959554 None:intergenic
TGAACTAGACATGCCTCCCT+TGG 0.507459 4.4:+11961530 MS.gene27963:CDS
ACGTGGGAAGCAGTCAAAGA+TGG 0.508809 4.4:+11957985 MS.gene27963:CDS
CAAATCAACTTGCTGAATAC+GGG 0.511163 4.4:-11957912 None:intergenic
TTAGTTCCATGGCTGTATGT+TGG 0.515006 4.4:+11958537 MS.gene27963:CDS
TTGAAGGAAGTGACATCTCA+GGG 0.515084 4.4:+11958511 MS.gene27963:CDS
AACTTCTCGTACACCTTATG+TGG 0.516226 4.4:+11960527 MS.gene27963:CDS
GTTGTTATTTGGATCTGCTA+AGG 0.517525 4.4:+11959731 MS.gene27963:CDS
ATAAATAAGCGCAAGAGTCT+CGG 0.517683 4.4:+11961507 MS.gene27963:CDS
GATGGACAATGACTTCGATT+CGG 0.519329 4.4:+11960074 MS.gene27963:CDS
AAGCCACAGTGGTATGCCCT+TGG 0.519658 4.4:-11959585 None:intergenic
TCATTTAAAGATGCTGAAGA+TGG 0.519800 4.4:+11960056 MS.gene27963:CDS
AAACTGAGAATTACAAAGAA+GGG 0.521718 4.4:+11960394 MS.gene27963:CDS
ATTTGTATGCTATGTCTGGC+TGG 0.521950 4.4:+11958445 MS.gene27963:CDS
GAGACGTCAACCGTCTTTGG+AGG 0.526011 4.4:+11958204 MS.gene27963:CDS
AAGCATGCAATATATCCAAA+AGG 0.529982 4.4:+11961053 MS.gene27963:CDS
CTAAGGGACGTATCTTAGCT+AGG 0.531048 4.4:-11957790 None:intergenic
ACTTCGATTCGGTTGAGGAA+AGG 0.531289 4.4:+11960085 MS.gene27963:CDS
CGTGGGAAGCAGTCAAAGAT+GGG 0.533229 4.4:+11957986 MS.gene27963:CDS
GAGCTACTGCACAACATCAA+TGG 0.533625 4.4:+11961552 MS.gene27963:CDS
ATAGGCCGACATGCTTCGAC+TGG 0.534634 4.4:-11957616 None:intergenic
ATAGCTGAAGCATGGCTCCC+AGG 0.534934 4.4:-11959143 None:intergenic
GTGTGAAGTCTGGCCCTGAT+TGG 0.535187 4.4:-11958084 None:intergenic
TCTATCAGCACTTTCAGCGC+AGG 0.535328 4.4:-11962059 None:intergenic
TAAATTGGAGAAATGCTTGT+GGG 0.535780 4.4:+11959811 MS.gene27963:CDS
GGTTCAAGTAATAGCTCTCT+AGG 0.535894 4.4:+11961849 MS.gene27963:CDS
TTAAGAGGTACCTCAAATGT+TGG 0.536321 4.4:-11957664 None:intergenic
GATGACTCTAAGTTAACTTG+TGG 0.541352 4.4:+11961828 MS.gene27963:CDS
TACCACTGTGGCTTCAGCAG+TGG 0.544420 4.4:+11959594 MS.gene27963:CDS
GGTGTATTATGGAGCTGACT+TGG 0.544686 4.4:+11958362 MS.gene27963:intron
TCAAAACATAATGCAGAACC+TGG 0.546610 4.4:-11958492 None:intergenic
TTTCATGATGAGACTCTGAA+TGG 0.546643 4.4:-11960506 None:intergenic
AGTTAACTTAGAGTCATCAA+TGG 0.547322 4.4:-11961823 None:intergenic
GCAGATAATTAAGTGAATAG+AGG 0.549173 4.4:-11959088 None:intergenic
TCTTTCTCCTTAAGAGGGCA+AGG 0.549473 4.4:-11957863 None:intergenic
AAAACTGAGAATTACAAAGA+AGG 0.549929 4.4:+11960393 MS.gene27963:CDS
GTACCCTACACATTCATGAC+TGG 0.551735 4.4:-11961760 None:intergenic
TATGCCGTACGGTTCAGCTA+AGG 0.552075 4.4:-11957807 None:intergenic
TCCAAATAACAACTTATCAT+GGG 0.552438 4.4:-11959721 None:intergenic
ATGCCGTACGGTTCAGCTAA+GGG 0.552755 4.4:-11957806 None:intergenic
ATAAGTTTGGATTCCAATCA+GGG 0.554076 4.4:+11958071 MS.gene27963:CDS
ATGTGACTGTGAGGACTGCT+AGG 0.556875 4.4:-11960468 None:intergenic
TCACCAGTCAGATCCACATA+AGG 0.560398 4.4:-11960540 None:intergenic
CCATATGATTGGTTTATGCA+TGG 0.561009 4.4:+11959648 MS.gene27963:CDS
ATCCCAGTCATGAATGTGTA+GGG 0.562524 4.4:+11961757 MS.gene27963:CDS
ACATTAGTTGGACATGGTGA+AGG 0.562740 4.4:-11960807 None:intergenic
TGCCGCAGATATCATCCAGA+TGG 0.562975 4.4:+11957590 MS.gene27963:intron
TAGGAGTTTGAAGACACGCT+TGG 0.563769 4.4:+11957764 MS.gene27963:intron
ATGGAACACACTTATTGTGA+CGG 0.563827 4.4:-11960695 None:intergenic
AGTGATGCCAAAGATGGTAA+AGG 0.565685 4.4:+11958160 MS.gene27963:CDS
CATGAAGAGTTGTCTCTGAA+AGG 0.565752 4.4:-11959767 None:intergenic
TGCATTACCTGAATAATGGA+TGG 0.567093 4.4:-11961600 None:intergenic
ATATCTCTTTCTCCTTAAGA+GGG 0.572645 4.4:-11957868 None:intergenic
AGTTGTTTCTGCTAGTGTTG+AGG 0.574329 4.4:+11960329 MS.gene27963:CDS
AGAAATGCTTGTGGGAAAGA+TGG 0.574345 4.4:+11959819 MS.gene27963:CDS
TGCTGGACAGTGCGATACAC+AGG 0.576053 4.4:-11959537 None:intergenic
ACTACATACCCAGCAAAATG+AGG 0.576860 4.4:-11958571 None:intergenic
TACCCTACACATTCATGACT+GGG 0.577744 4.4:-11961759 None:intergenic
GGGTTGAGTGATGCCAAAGA+TGG 0.578033 4.4:+11958154 MS.gene27963:CDS
TTTACAACCATCAAGTGTAC+CGG 0.580118 4.4:-11960838 None:intergenic
TCTGCTAAGGAAGCTGTACA+TGG 0.580656 4.4:+11959744 MS.gene27963:CDS
GATGTTGTGCAGTAGCTCCA+AGG 0.582324 4.4:-11961547 None:intergenic
CGATTTGATAAAGCTGGAGG+AGG 0.582351 4.4:+11961899 MS.gene27963:CDS
CACTTCAGCAGATAAGTGCT+GGG 0.582503 4.4:+11961455 MS.gene27963:CDS
CCTGAATAATGGATGGCGAA+AGG 0.582584 4.4:-11961593 None:intergenic
ACCAAATCTACTCAACGAGT+TGG 0.584203 4.4:+11959211 MS.gene27963:CDS
CAATAAGTGTGTTCCATATG+CGG 0.587501 4.4:+11960701 MS.gene27963:CDS
ATTTGTTATCACGTTTCCAA+GGG 0.587884 4.4:+11959569 MS.gene27963:CDS
CATGGGACAAGGATGTCTTA+CGG 0.588015 4.4:-11959704 None:intergenic
TTTCGAACATTAGTTGGACA+TGG 0.589138 4.4:-11960813 None:intergenic
GGTGGAGCCCAGCAAGCTGG+AGG 0.590956 4.4:-11957842 None:intergenic
ACCACGTGCAATAGAAGCGT+GGG 0.592481 4.4:+11960290 MS.gene27963:CDS
TCATTAGTTCCTGTACAAGA+AGG 0.593267 4.4:-11960426 None:intergenic
TTCAATACTTAAGTCTGAGG+AGG 0.593936 4.4:+11959512 MS.gene27963:CDS
ACACCTTATGTGGATCTGAC+TGG 0.594288 4.4:+11960537 MS.gene27963:CDS
GCGTGGGAAACTAGAAACAT+TGG 0.596035 4.4:+11960306 MS.gene27963:CDS
CATGGACAATAAAGTTAAGG+AGG 0.596567 4.4:+11960593 MS.gene27963:CDS
CAACTTGAATGATACTATGT+TGG 0.596879 4.4:+11960569 MS.gene27963:CDS
AATAGATGAGCTAAGTACAT+TGG 0.598739 4.4:+11960248 MS.gene27963:CDS
GATCCCAGTCATGAATGTGT+AGG 0.603075 4.4:+11961756 MS.gene27963:CDS
ATGTTGTGCAGTAGCTCCAA+GGG 0.604106 4.4:-11961546 None:intergenic
GCCGATGAGGAAGAAAAGTA+GGG 0.604404 4.4:+11957949 MS.gene27963:CDS
GAATGATACTATGTTGGTCA+TGG 0.604927 4.4:+11960575 MS.gene27963:CDS
AACATAGAACTTAGTGCTGG+TGG 0.608237 4.4:+11960762 MS.gene27963:CDS
AGTGTTTGTGAAAACCTCGT+TGG 0.608940 4.4:-11961436 None:intergenic
GACAACATAGAACTTAGTGC+TGG 0.610680 4.4:+11960759 MS.gene27963:CDS
CACATTCCAACATACAGCCA+TGG 0.611126 4.4:-11958543 None:intergenic
TCCTTCAATACTTAAGTCTG+AGG 0.614807 4.4:+11959509 MS.gene27963:CDS
CCTTCAATATCCTCCAAAGA+CGG 0.614825 4.4:-11958214 None:intergenic
GCCGCAGATATCATCCAGAT+GGG 0.615605 4.4:+11957591 MS.gene27963:intron
AAAGGGCCAAGAAATCCAGC+AGG 0.615665 4.4:-11961248 None:intergenic
GAAACCGACTGATGAGGTCG+AGG 0.617162 4.4:+11958258 MS.gene27963:CDS
TTCAGAACCGAGAGCCGATG+AGG 0.624951 4.4:+11957936 MS.gene27963:CDS
GTGGAGCCCAGCAAGCTGGA+GGG 0.625471 4.4:-11957841 None:intergenic
AATAGAGAAACCGACTGATG+AGG 0.625485 4.4:+11958252 MS.gene27963:CDS
TTGTGCAGAGGCTGTGAATG+TGG 0.627642 4.4:+11959623 MS.gene27963:CDS
CTTGTACAGGAACTAATGAG+AGG 0.627759 4.4:+11960430 MS.gene27963:CDS
AACCACGTGCAATAGAAGCG+TGG 0.632059 4.4:+11960289 MS.gene27963:CDS
TTCTCCTTAAGAGGGCAAGG+TGG 0.634638 4.4:-11957860 None:intergenic
ATTACCTCGACCTCATCAGT+CGG 0.637187 4.4:-11958262 None:intergenic
TGAGGAAGAAAAGTAGGGCA+AGG 0.637571 4.4:+11957954 MS.gene27963:CDS
CATCTTCTATAGCTGAAGCA+TGG 0.639567 4.4:-11959151 None:intergenic
AAGACGGTTGACGTCTCTCG+TGG 0.641018 4.4:-11958198 None:intergenic
CAGTGGCTTCAATTGTGCAG+AGG 0.641990 4.4:+11959611 MS.gene27963:CDS
TTAAATTGGAGAAATGCTTG+TGG 0.644063 4.4:+11959810 MS.gene27963:CDS
TCAAATGTTGGATAAAACAC+AGG 0.645267 4.4:-11957652 None:intergenic
GGGATCCAGTCGAAGCATGT+CGG 0.647902 4.4:+11957611 MS.gene27963:CDS
AAGCTGGAGGAGGATGACAT+AGG 0.648499 4.4:+11961909 MS.gene27963:CDS
TCAACTTGCTGAATACGGGT+CGG 0.649157 4.4:-11957908 None:intergenic
TCCCACGCTTCTATTGCACG+TGG 0.656740 4.4:-11960291 None:intergenic
AAGTATGGTATGGTGTACCT+GGG 0.658392 4.4:+11959126 MS.gene27963:CDS
CAGCTATAGAAGATGCAATG+AGG 0.660862 4.4:+11959159 MS.gene27963:CDS
CGTCCCTTAGCTGAACCGTA+CGG 0.660944 4.4:+11957803 MS.gene27963:CDS
TAACAACTTATCATGGGACA+AGG 0.661705 4.4:-11959715 None:intergenic
TCGCACTGTCCAGCATTCTG+GGG 0.664789 4.4:+11959545 MS.gene27963:CDS
GGTGACCCAAAAGTATGGTA+TGG 0.666509 4.4:+11959116 MS.gene27963:CDS
TGTCGATTTGATAAAGCTGG+AGG 0.667838 4.4:+11961896 MS.gene27963:CDS
CTGATGCACAATTGACTCAG+TGG 0.670313 4.4:+11962033 MS.gene27963:CDS
AGGGCAAGGAAACGAAAACG+TGG 0.674251 4.4:+11957968 MS.gene27963:CDS
ATAGCTCTCTAGGTGACTCG+AGG 0.683160 4.4:+11961859 MS.gene27963:CDS
TTGTGCAGTAGCTCCAAGGG+AGG 0.695431 4.4:-11961543 None:intergenic
CTGTTGTGTATGGAAAACAT+TGG 0.709730 4.4:+11961024 MS.gene27963:CDS
TGAAGGAAGTGACATCTCAG+GGG 0.710950 4.4:+11958512 MS.gene27963:CDS
GGGCAAGGAAACGAAAACGT+GGG 0.715860 4.4:+11957969 MS.gene27963:CDS
AGCCACTGCTGAAGCCACAG+TGG 0.722140 4.4:-11959596 None:intergenic
TCTGAAGAAATGTGACTGTG+AGG 0.731640 4.4:-11960477 None:intergenic
TTTCCAAGGGCATACCACTG+TGG 0.743487 4.4:+11959582 MS.gene27963:CDS
ACTCGCAACCAACAGCAGAG+AGG 0.744115 4.4:-11960137 None:intergenic
TTTGGAAGAACACCCCAACG+AGG 0.753244 4.4:+11961422 MS.gene27963:CDS
TCACTTAATTATCTGCACTG+GGG 0.758613 4.4:+11959095 MS.gene27963:CDS
TGTTTGTGAAAACCTCGTTG+GGG 0.761413 4.4:-11961434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTATAATCTAATTGA+AGG + chr4.4:11958776-11958795 MS.gene27963:intron 10.0%
!! ATATCTAAACATATATTTAT+AGG - chr4.4:11957515-11957534 None:intergenic 10.0%
!!! AAAATCTAAAATGTTTAAAT+TGG + chr4.4:11959796-11959815 MS.gene27963:CDS 10.0%
!!! ATTTTTCTAAATATATGAAA+GGG - chr4.4:11959906-11959925 None:intergenic 10.0%
!! AATGAAAAAGTTTAGTATTT+CGG + chr4.4:11960980-11960999 MS.gene27963:CDS 15.0%
!! ATCAGAAGATATATAAAATA+AGG - chr4.4:11959445-11959464 None:intergenic 15.0%
!! CACAAAAATATAAACAAAAA+AGG - chr4.4:11959970-11959989 None:intergenic 15.0%
!! TTCAATAAAAAATATATTCC+AGG + chr4.4:11961395-11961414 MS.gene27963:intron 15.0%
!!! AAATACTAAACTTTTTCATT+GGG - chr4.4:11960980-11960999 None:intergenic 15.0%
!!! GATTTTTCTAAATATATGAA+AGG - chr4.4:11959907-11959926 None:intergenic 15.0%
!!! TTAATTTTATTCTTCTCATT+AGG + chr4.4:11957745-11957764 MS.gene27963:intron 15.0%
!!! TTTAACTTTTCTTTTTCTTT+TGG + chr4.4:11961138-11961157 MS.gene27963:intron 15.0%
!!! TTTTTCTAAATATATGAAAG+GGG - chr4.4:11959905-11959924 None:intergenic 15.0%
!! AAAAAAACATATAACTCTAC+AGG - chr4.4:11958701-11958720 None:intergenic 20.0%
!! ACTTATAATATATACGTCTA+TGG - chr4.4:11961684-11961703 None:intergenic 20.0%
!! AGTTCTTTGTATTTGAATAT+TGG + chr4.4:11960624-11960643 MS.gene27963:CDS 20.0%
!! ATAATCTAATTGAAGGTTAA+TGG + chr4.4:11958783-11958802 MS.gene27963:intron 20.0%
!! TATGAATGAAGAAAAGTTTA+AGG + chr4.4:11958623-11958642 MS.gene27963:intron 20.0%
!! TGTCAAAGATATATTTGTAT+TGG - chr4.4:11960946-11960965 None:intergenic 20.0%
!!! AATACTAAACTTTTTCATTG+GGG - chr4.4:11960979-11960998 None:intergenic 20.0%
!!! ATGCATAATGTATATTTTGT+AGG + chr4.4:11959333-11959352 MS.gene27963:intron 20.0%
!!! GAAATACTAAACTTTTTCAT+TGG - chr4.4:11960981-11961000 None:intergenic 20.0%
!!! TTTTGAAATTGAATGTAACA+TGG + chr4.4:11957549-11957568 MS.gene27963:intron 20.0%
! AAAACTGAGAATTACAAAGA+AGG + chr4.4:11960393-11960412 MS.gene27963:CDS 25.0%
! AAACTGAGAATTACAAAGAA+GGG + chr4.4:11960394-11960413 MS.gene27963:CDS 25.0%
! AAATATATTCCAGGTTACTT+TGG + chr4.4:11961404-11961423 MS.gene27963:intron 25.0%
! AATAAAGTTAAGGAGGATAA+GGG + chr4.4:11960600-11960619 MS.gene27963:CDS 25.0%
! AATATTGTTGACAACATTGT+TGG + chr4.4:11958282-11958301 MS.gene27963:intron 25.0%
! AATCACAAACAAGTTAATTC+TGG + chr4.4:11961786-11961805 MS.gene27963:CDS 25.0%
! ACTGAAACAGTTTATCATAA+TGG - chr4.4:11961722-11961741 None:intergenic 25.0%
! ACTTAATAGTATGCTTGAAA+CGG + chr4.4:11960905-11960924 MS.gene27963:CDS 25.0%
! ATATTTAGCAAAGAATTTGC+AGG - chr4.4:11960666-11960685 None:intergenic 25.0%
! ATCAATGGTCATAAAATGTT+TGG + chr4.4:11961567-11961586 MS.gene27963:CDS 25.0%
! ATCCAAATAACAACTTATCA+TGG - chr4.4:11959725-11959744 None:intergenic 25.0%
! CAAAGATATATTTGTATTGG+AGG - chr4.4:11960943-11960962 None:intergenic 25.0%
! GTAAGCACTCATAATATTTA+AGG + chr4.4:11958899-11958918 MS.gene27963:intron 25.0%
! TAGAAAAATCCGTAAAACTT+TGG + chr4.4:11959917-11959936 MS.gene27963:intron 25.0%
! TATATATCTTCTGATTGTAG+TGG + chr4.4:11959450-11959469 MS.gene27963:intron 25.0%
! TATTACTATACGATTTCTGT+AGG + chr4.4:11958341-11958360 MS.gene27963:intron 25.0%
! TCCAAATAACAACTTATCAT+GGG - chr4.4:11959724-11959743 None:intergenic 25.0%
!! AAATACCATCCAAAGTTTTA+CGG - chr4.4:11959929-11959948 None:intergenic 25.0%
!! AAGCTAAGTTGACAAATTTA+AGG + chr4.4:11958731-11958750 MS.gene27963:intron 25.0%
!! AATGGATAAAAGATTTGTTC+TGG + chr4.4:11960215-11960234 MS.gene27963:CDS 25.0%
!! ACATGATAGTGATAATTAAG+AGG - chr4.4:11957682-11957701 None:intergenic 25.0%
!! ATAAAAGAACAATCTAAGAC+CGG - chr4.4:11961101-11961120 None:intergenic 25.0%
!! CTATCATGTACTATAGATTT+TGG + chr4.4:11957693-11957712 MS.gene27963:intron 25.0%
!! TTCTTTTGGTGAAATTATGA+AGG + chr4.4:11961152-11961171 MS.gene27963:intron 25.0%
!!! TCTTTTAAAGATTGCTACTT+CGG + chr4.4:11958133-11958152 MS.gene27963:CDS 25.0%
AAAATCCGTAAAACTTTGGA+TGG + chr4.4:11959921-11959940 MS.gene27963:intron 30.0%
AAGCATGCAATATATCCAAA+AGG + chr4.4:11961053-11961072 MS.gene27963:CDS 30.0%
AATAGATGAGCTAAGTACAT+TGG + chr4.4:11960248-11960267 MS.gene27963:CDS 30.0%
AATCATTACCTTAACTGCAT+TGG - chr4.4:11959853-11959872 None:intergenic 30.0%
AGTTAACTTAGAGTCATCAA+TGG - chr4.4:11961826-11961845 None:intergenic 30.0%
AGTTTGCATTACCTGAATAA+TGG - chr4.4:11961607-11961626 None:intergenic 30.0%
ATAAGTTTGGATTCCAATCA+GGG + chr4.4:11958071-11958090 MS.gene27963:CDS 30.0%
ATATCTCTTTCTCCTTAAGA+GGG - chr4.4:11957871-11957890 None:intergenic 30.0%
ATTCACTTAATTATCTGCAC+TGG + chr4.4:11959093-11959112 MS.gene27963:CDS 30.0%
CAACTTGAATGATACTATGT+TGG + chr4.4:11960569-11960588 MS.gene27963:CDS 30.0%
CAATAAAGTTAAGGAGGATA+AGG + chr4.4:11960599-11960618 MS.gene27963:CDS 30.0%
CTAAGACAAGAATAGTTATC+AGG - chr4.4:11960168-11960187 None:intergenic 30.0%
CTAGAAAGATTCCTGAAAAA+GGG + chr4.4:11961969-11961988 MS.gene27963:CDS 30.0%
CTCAAAGAATTTCAGCAATA+TGG + chr4.4:11958106-11958125 MS.gene27963:CDS 30.0%
CTTAATAGTATGCTTGAAAC+GGG + chr4.4:11960906-11960925 MS.gene27963:CDS 30.0%
GCAGATAATTAAGTGAATAG+AGG - chr4.4:11959091-11959110 None:intergenic 30.0%
TAAATTGGAGAAATGCTTGT+GGG + chr4.4:11959811-11959830 MS.gene27963:CDS 30.0%
TCAAATGTTGGATAAAACAC+AGG - chr4.4:11957655-11957674 None:intergenic 30.0%
TCATTTAAAGATGCTGAAGA+TGG + chr4.4:11960056-11960075 MS.gene27963:CDS 30.0%
TCTAGAAAGATTCCTGAAAA+AGG + chr4.4:11961968-11961987 MS.gene27963:CDS 30.0%
TCTGAATCTGATGATAAGTT+TGG + chr4.4:11958058-11958077 MS.gene27963:CDS 30.0%
TCTTAAGGAGAAAGAGATAT+GGG + chr4.4:11957871-11957890 MS.gene27963:CDS 30.0%
TGTTAGGTGTAAGCTAAAAA+AGG - chr4.4:11961655-11961674 None:intergenic 30.0%
TTAAATTGGAGAAATGCTTG+TGG + chr4.4:11959810-11959829 MS.gene27963:CDS 30.0%
TTCACTTAATTATCTGCACT+GGG + chr4.4:11959094-11959113 MS.gene27963:CDS 30.0%
TTCAGCATCTTTAAATGATC+CGG - chr4.4:11960054-11960073 None:intergenic 30.0%
TTGAGCTTAAAACAGAAACA+AGG - chr4.4:11961294-11961313 None:intergenic 30.0%
TTGTTCACGAATTATGTACA+TGG - chr4.4:11959300-11959319 None:intergenic 30.0%
! AAATCATTTGATGATCGCAT+TGG - chr4.4:11958855-11958874 None:intergenic 30.0%
! ACAATTTTACATATGCCGTA+CGG - chr4.4:11957821-11957840 None:intergenic 30.0%
! ATTTGTCAACTTAGCTTTCA+TGG - chr4.4:11958728-11958747 None:intergenic 30.0%
! CGGTGTTAATTACTCTTTAT+AGG - chr4.4:11959023-11959042 None:intergenic 30.0%
! CTTGATGGTTGTAAATTGTT+TGG + chr4.4:11960846-11960865 MS.gene27963:CDS 30.0%
! GTAAATACCTTTTTGTGTTG+TGG - chr4.4:11957414-11957433 None:intergenic 30.0%
! TCATGTACTATAGATTTTGG+CGG + chr4.4:11957696-11957715 MS.gene27963:intron 30.0%
! TCCCATGATAAGTTGTTATT+TGG + chr4.4:11959720-11959739 MS.gene27963:CDS 30.0%
! TGTGTTTTATCCAACATTTG+AGG + chr4.4:11957654-11957673 MS.gene27963:CDS 30.0%
!! AATTTGTTATCACGTTTCCA+AGG + chr4.4:11959568-11959587 MS.gene27963:CDS 30.0%
!! ATTTGTTATCACGTTTCCAA+GGG + chr4.4:11959569-11959588 MS.gene27963:CDS 30.0%
!! CTTTTAAAGATTGCTACTTC+GGG + chr4.4:11958134-11958153 MS.gene27963:CDS 30.0%
AATTCTTTGAGTGTGAAGTC+TGG - chr4.4:11958097-11958116 None:intergenic 35.0%
ACATAGTTACAGATGCTTGA+TGG - chr4.4:11961215-11961234 None:intergenic 35.0%
ACCAAAAAATAGCAGCAATG+AGG - chr4.4:11959254-11959273 None:intergenic 35.0%
ACCAAAATCACGATGACATT+TGG + chr4.4:11959385-11959404 MS.gene27963:intron 35.0%
ACGTCTATGGTACTAATGTT+AGG - chr4.4:11961671-11961690 None:intergenic 35.0%
AGGAATGATACCCTGAAAAA+AGG - chr4.4:11961269-11961288 None:intergenic 35.0%
AGGATATTGAAGGTGAATAC+TGG + chr4.4:11958224-11958243 MS.gene27963:CDS 35.0%
ATAAATAAGCGCAAGAGTCT+CGG + chr4.4:11961507-11961526 MS.gene27963:CDS 35.0%
ATCACTACCTTTACCATCTT+TGG - chr4.4:11958170-11958189 None:intergenic 35.0%
ATCCTTGTCTGTCAAAAGTA+AGG - chr4.4:11960000-11960019 None:intergenic 35.0%
ATCTGAATCACTCTCAGTTA+AGG - chr4.4:11958427-11958446 None:intergenic 35.0%
ATGGAACACACTTATTGTGA+CGG - chr4.4:11960698-11960717 None:intergenic 35.0%
CAAATCGACACCAAAAAGTT+TGG - chr4.4:11961886-11961905 None:intergenic 35.0%
CAAGTTAATTCTGGATCTTC+AGG + chr4.4:11961795-11961814 MS.gene27963:CDS 35.0%
CAATAAGTGTGTTCCATATG+CGG + chr4.4:11960701-11960720 MS.gene27963:CDS 35.0%
CATATCTCTTTCTCCTTAAG+AGG - chr4.4:11957872-11957891 None:intergenic 35.0%
CATCAATCCACAACACAAAA+AGG + chr4.4:11957404-11957423 MS.gene27963:CDS 35.0%
CATGGACAATAAAGTTAAGG+AGG + chr4.4:11960593-11960612 MS.gene27963:CDS 35.0%
CCAACTAATGTTCGAAATTC+CGG + chr4.4:11960819-11960838 MS.gene27963:CDS 35.0%
CCATGCATAAACCAATCATA+TGG - chr4.4:11959651-11959670 None:intergenic 35.0%
CGATTTCTGTAGGTGTATTA+TGG + chr4.4:11958351-11958370 MS.gene27963:intron 35.0%
CTCTTAAGGAGAAAGAGATA+TGG + chr4.4:11957870-11957889 MS.gene27963:CDS 35.0%
CTGTTGTGTATGGAAAACAT+TGG + chr4.4:11961024-11961043 MS.gene27963:CDS 35.0%
CTTAAAACAGAAACAAGGTC+AGG - chr4.4:11961289-11961308 None:intergenic 35.0%
GAATGATACTATGTTGGTCA+TGG + chr4.4:11960575-11960594 MS.gene27963:CDS 35.0%
GATAAGTTTGGATTCCAATC+AGG + chr4.4:11958070-11958089 MS.gene27963:CDS 35.0%
GGAATGATACCCTGAAAAAA+GGG - chr4.4:11961268-11961287 None:intergenic 35.0%
GGTCATGGACAATAAAGTTA+AGG + chr4.4:11960590-11960609 MS.gene27963:CDS 35.0%
TAACAACTTATCATGGGACA+AGG - chr4.4:11959718-11959737 None:intergenic 35.0%
TCAAAACATAATGCAGAACC+TGG - chr4.4:11958495-11958514 None:intergenic 35.0%
TCACTTAATTATCTGCACTG+GGG + chr4.4:11959095-11959114 MS.gene27963:CDS 35.0%
TCAGATTTGTATGCTATGTC+TGG + chr4.4:11958441-11958460 MS.gene27963:CDS 35.0%
TCAGTTAAGGATGATGTCTT+AGG - chr4.4:11958414-11958433 None:intergenic 35.0%
TCATTAGTTCCTGTACAAGA+AGG - chr4.4:11960429-11960448 None:intergenic 35.0%
TCCTTCAATACTTAAGTCTG+AGG + chr4.4:11959509-11959528 MS.gene27963:CDS 35.0%
TGTTCTTACCAATGCAGTTA+AGG + chr4.4:11959842-11959861 MS.gene27963:CDS 35.0%
TTCAATACTTAAGTCTGAGG+AGG + chr4.4:11959512-11959531 MS.gene27963:CDS 35.0%
TTGACAGACAAGGATAATGA+TGG + chr4.4:11960005-11960024 MS.gene27963:intron 35.0%
TTTACAACCATCAAGTGTAC+CGG - chr4.4:11960841-11960860 None:intergenic 35.0%
TTTCATGATGAGACTCTGAA+TGG - chr4.4:11960509-11960528 None:intergenic 35.0%
TTTCGAACATTAGTTGGACA+TGG - chr4.4:11960816-11960835 None:intergenic 35.0%
! ACATTGGTTGAAGCATTAGA+AGG + chr4.4:11960264-11960283 MS.gene27963:CDS 35.0%
! GATGACTCTAAGTTAACTTG+TGG + chr4.4:11961828-11961847 MS.gene27963:CDS 35.0%
! GCTTTCTGTAACATCTTTTC+CGG + chr4.4:11961079-11961098 MS.gene27963:intron 35.0%
! GGATAATGATGGAAAAAGAG+AGG + chr4.4:11960016-11960035 MS.gene27963:CDS 35.0%
! GTACACCATACCATACTTTT+GGG - chr4.4:11959124-11959143 None:intergenic 35.0%
! TCCAAATGTCATCGTGATTT+TGG - chr4.4:11959389-11959408 None:intergenic 35.0%
! TGCATTACCTGAATAATGGA+TGG - chr4.4:11961603-11961622 None:intergenic 35.0%
!! ACACTTATTGTGACGGATTT+CGG - chr4.4:11960691-11960710 None:intergenic 35.0%
!! ACTGCTTGTGTTGATTTGTT+TGG + chr4.4:11958926-11958945 MS.gene27963:intron 35.0%
!! ATCCTTACTTTTGACAGACA+AGG + chr4.4:11959995-11960014 MS.gene27963:intron 35.0%
!! CAAATCAACTTGCTGAATAC+GGG - chr4.4:11957915-11957934 None:intergenic 35.0%
!! CCATATGATTGGTTTATGCA+TGG + chr4.4:11959648-11959667 MS.gene27963:CDS 35.0%
!! CTAGTAACTTTTTCCGCATA+TGG - chr4.4:11960717-11960736 None:intergenic 35.0%
!! CTTTTTGTGTTGTGGATTGA+TGG - chr4.4:11957406-11957425 None:intergenic 35.0%
!! GCAAATCAACTTGCTGAATA+CGG - chr4.4:11957916-11957935 None:intergenic 35.0%
!! GGTTCTGCATTATGTTTTGA+AGG + chr4.4:11958495-11958514 MS.gene27963:CDS 35.0%
!! GTTGTTATTTGGATCTGCTA+AGG + chr4.4:11959731-11959750 MS.gene27963:CDS 35.0%
!! GTTGTTTTGCTCATGTGAAA+TGG + chr4.4:11960197-11960216 MS.gene27963:CDS 35.0%
!! TCCTCAGACTTAAGTATTGA+AGG - chr4.4:11959513-11959532 None:intergenic 35.0%
!! TTAAGAGGTACCTCAAATGT+TGG - chr4.4:11957667-11957686 None:intergenic 35.0%
!!! ATTTCTTGGCCCTTTTTTCA+GGG + chr4.4:11961256-11961275 MS.gene27963:CDS 35.0%
!!! TCCTCATTGCTGCTATTTTT+TGG + chr4.4:11959250-11959269 MS.gene27963:intron 35.0%
AAAAGATCGCCTTCTTGTAC+AGG + chr4.4:11960417-11960436 MS.gene27963:CDS 40.0%
AAAGTATGGTATGGTGTACC+TGG + chr4.4:11959125-11959144 MS.gene27963:CDS 40.0%
AACTTCTCGTACACCTTATG+TGG + chr4.4:11960527-11960546 MS.gene27963:CDS 40.0%
AAGTATGGTATGGTGTACCT+GGG + chr4.4:11959126-11959145 MS.gene27963:CDS 40.0%
AATAGAGAAACCGACTGATG+AGG + chr4.4:11958252-11958271 MS.gene27963:CDS 40.0%
ACATTAGTTGGACATGGTGA+AGG - chr4.4:11960810-11960829 None:intergenic 40.0%
ACCAAATCTACTCAACGAGT+TGG + chr4.4:11959211-11959230 MS.gene27963:CDS 40.0%
ACCAACTCGTTGAGTAGATT+TGG - chr4.4:11959215-11959234 None:intergenic 40.0%
ACTACATACCCAGCAAAATG+AGG - chr4.4:11958574-11958593 None:intergenic 40.0%
AGAAATGCTTGTGGGAAAGA+TGG + chr4.4:11959819-11959838 MS.gene27963:CDS 40.0%
AGTGATGCCAAAGATGGTAA+AGG + chr4.4:11958160-11958179 MS.gene27963:CDS 40.0%
AGTGTTTGTGAAAACCTCGT+TGG - chr4.4:11961439-11961458 None:intergenic 40.0%
ATCCCAGTCATGAATGTGTA+GGG + chr4.4:11961757-11961776 MS.gene27963:CDS 40.0%
ATCTTCAACATGCTGTTCCA+AGG - chr4.4:11959063-11959082 None:intergenic 40.0%
ATTTGTATGCTATGTCTGGC+TGG + chr4.4:11958445-11958464 MS.gene27963:CDS 40.0%
CAAAGATGGGAACGTGTAAT+AGG + chr4.4:11957999-11958018 MS.gene27963:CDS 40.0%
CAGCTATAGAAGATGCAATG+AGG + chr4.4:11959159-11959178 MS.gene27963:CDS 40.0%
CAGTCACATTTCTTCAGAGT+TGG + chr4.4:11960482-11960501 MS.gene27963:CDS 40.0%
CATCTTCTATAGCTGAAGCA+TGG - chr4.4:11959154-11959173 None:intergenic 40.0%
CATGAAGAGTTGTCTCTGAA+AGG - chr4.4:11959770-11959789 None:intergenic 40.0%
CCGGAATTTCGAACATTAGT+TGG - chr4.4:11960822-11960841 None:intergenic 40.0%
CCTTCAATATCCTCCAAAGA+CGG - chr4.4:11958217-11958236 None:intergenic 40.0%
CTGCAAATGCACTCAGATTT+AGG + chr4.4:11960876-11960895 MS.gene27963:CDS 40.0%
CTTGTACAGGAACTAATGAG+AGG + chr4.4:11960430-11960449 MS.gene27963:CDS 40.0%
CTTTCAGAGACAACTCTTCA+TGG + chr4.4:11959768-11959787 MS.gene27963:CDS 40.0%
GAAAGGGGTTCAAATCAAAG+AGG - chr4.4:11959890-11959909 None:intergenic 40.0%
GACAACATAGAACTTAGTGC+TGG + chr4.4:11960759-11960778 MS.gene27963:CDS 40.0%
GATGGACAATGACTTCGATT+CGG + chr4.4:11960074-11960093 MS.gene27963:CDS 40.0%
GGTTCAAATCAAAGAGGAGA+GGG - chr4.4:11959884-11959903 None:intergenic 40.0%
GGTTCAAGTAATAGCTCTCT+AGG + chr4.4:11961849-11961868 MS.gene27963:CDS 40.0%
GGTTGCTCTTCAAACAAATC+AGG - chr4.4:11959194-11959213 None:intergenic 40.0%
GTGTTTGTGAAAACCTCGTT+GGG - chr4.4:11961438-11961457 None:intergenic 40.0%
TAACAAATTCCCCAGAATGC+TGG - chr4.4:11959557-11959576 None:intergenic 40.0%
TACCCTACACATTCATGACT+GGG - chr4.4:11961762-11961781 None:intergenic 40.0%
TCTGAAGAAATGTGACTGTG+AGG - chr4.4:11960480-11960499 None:intergenic 40.0%
TGAATGTGGCTCCATATGAT+TGG + chr4.4:11959637-11959656 MS.gene27963:CDS 40.0%
TGGAAAAAGAGAGGCTTGAA+TGG + chr4.4:11960025-11960044 MS.gene27963:CDS 40.0%
TGTTTGTGAAAACCTCGTTG+GGG - chr4.4:11961437-11961456 None:intergenic 40.0%
TTAGTTCCATGGCTGTATGT+TGG + chr4.4:11958537-11958556 MS.gene27963:CDS 40.0%
TTCTGATCGCATCTTTGTAC+AGG + chr4.4:11959473-11959492 MS.gene27963:intron 40.0%
TTGAAGGAAGTGACATCTCA+GGG + chr4.4:11958511-11958530 MS.gene27963:CDS 40.0%
TTGCATGCACGAACAAGATA+TGG + chr4.4:11960356-11960375 MS.gene27963:CDS 40.0%
TTTGAAGGAAGTGACATCTC+AGG + chr4.4:11958510-11958529 MS.gene27963:CDS 40.0%
! AACATAGAACTTAGTGCTGG+TGG + chr4.4:11960762-11960781 MS.gene27963:CDS 40.0%
! ACAGGTGTTTCACCGATTAT+AGG - chr4.4:11957637-11957656 None:intergenic 40.0%
! AGTTTGGGATCTGTTGTGTA+TGG + chr4.4:11961014-11961033 MS.gene27963:CDS 40.0%
! GGTACACCATACCATACTTT+TGG - chr4.4:11959125-11959144 None:intergenic 40.0%
! GTGCTTTTCCTCATTTTGCT+GGG + chr4.4:11958563-11958582 MS.gene27963:CDS 40.0%
! TGTGCTTTTCCTCATTTTGC+TGG + chr4.4:11958562-11958581 MS.gene27963:CDS 40.0%
!! AGTTGTTTCTGCTAGTGTTG+AGG + chr4.4:11960329-11960348 MS.gene27963:CDS 40.0%
!! GTTACAGAAAGCGTACCTTT+TGG - chr4.4:11961071-11961090 None:intergenic 40.0%
!! TCGGTTGAGCTTGTTAGTTT+GGG + chr4.4:11960999-11961018 MS.gene27963:CDS 40.0%
!! TGGTGTCGATTTGATAAAGC+TGG + chr4.4:11961893-11961912 MS.gene27963:CDS 40.0%
!! TGTACTATAGATTTTGGCGG+TGG + chr4.4:11957699-11957718 MS.gene27963:intron 40.0%
!! TGTCGATTTGATAAAGCTGG+AGG + chr4.4:11961896-11961915 MS.gene27963:CDS 40.0%
!! TTCGGTTGAGCTTGTTAGTT+TGG + chr4.4:11960998-11961017 MS.gene27963:CDS 40.0%
!!! ACTTTTTCATTGGGGAGCTT+TGG - chr4.4:11960971-11960990 None:intergenic 40.0%
!!! GATTTCTTGGCCCTTTTTTC+AGG + chr4.4:11961255-11961274 MS.gene27963:CDS 40.0%
AACAAGACACGTGCTCAACA+CGG - chr4.4:11957446-11957465 None:intergenic 45.0%
AATAACTTTGCGCGACTTCC+AGG + chr4.4:11958474-11958493 MS.gene27963:CDS 45.0%
ACACCTTATGTGGATCTGAC+TGG + chr4.4:11960537-11960556 MS.gene27963:CDS 45.0%
ACACTTCAGCAGATAAGTGC+TGG + chr4.4:11961454-11961473 MS.gene27963:CDS 45.0%
ACTGGGATCTTGAGCTTCAA+TGG - chr4.4:11961745-11961764 None:intergenic 45.0%
AGCCGATGAGGAAGAAAAGT+AGG + chr4.4:11957948-11957967 MS.gene27963:CDS 45.0%
ATGTTGTGCAGTAGCTCCAA+GGG - chr4.4:11961549-11961568 None:intergenic 45.0%
ATTACCTCGACCTCATCAGT+CGG - chr4.4:11958265-11958284 None:intergenic 45.0%
CACATTCCAACATACAGCCA+TGG - chr4.4:11958546-11958565 None:intergenic 45.0%
CACTTCAGCAGATAAGTGCT+GGG + chr4.4:11961455-11961474 MS.gene27963:CDS 45.0%
CATGGGACAAGGATGTCTTA+CGG - chr4.4:11959707-11959726 None:intergenic 45.0%
CCTTTCGCCATCCATTATTC+AGG + chr4.4:11961593-11961612 MS.gene27963:CDS 45.0%
CGAAATTCCGGTACACTTGA+TGG + chr4.4:11960831-11960850 MS.gene27963:CDS 45.0%
CGATTTGATAAAGCTGGAGG+AGG + chr4.4:11961899-11961918 MS.gene27963:CDS 45.0%
CTAAGGGACGTATCTTAGCT+AGG - chr4.4:11957793-11957812 None:intergenic 45.0%
GAAGCATGTCGGCCTATAAT+CGG + chr4.4:11957622-11957641 MS.gene27963:CDS 45.0%
GAGCTACTGCACAACATCAA+TGG + chr4.4:11961552-11961571 MS.gene27963:CDS 45.0%
GATCCCAGTCATGAATGTGT+AGG + chr4.4:11961756-11961775 MS.gene27963:CDS 45.0%
GCCGATGAGGAAGAAAAGTA+GGG + chr4.4:11957949-11957968 MS.gene27963:CDS 45.0%
GCGTGGGAAACTAGAAACAT+TGG + chr4.4:11960306-11960325 MS.gene27963:CDS 45.0%
GGAACGTGTAATAGGAGAAC+TGG + chr4.4:11958007-11958026 MS.gene27963:CDS 45.0%
GGGTTCAAATCAAAGAGGAG+AGG - chr4.4:11959885-11959904 None:intergenic 45.0%
GGTGTATTATGGAGCTGACT+TGG + chr4.4:11958362-11958381 MS.gene27963:intron 45.0%
GGTGTTCTTCCAAAGTAACC+TGG - chr4.4:11961416-11961435 None:intergenic 45.0%
GTACCCTACACATTCATGAC+TGG - chr4.4:11961763-11961782 None:intergenic 45.0%
GTCATGAATGTGTAGGGTAC+TGG + chr4.4:11961763-11961782 MS.gene27963:CDS 45.0%
GTCATTCCTGCTGGATTTCT+TGG + chr4.4:11961242-11961261 MS.gene27963:CDS 45.0%
GTTTGTGAAGTCATTCCTGC+TGG + chr4.4:11961233-11961252 MS.gene27963:CDS 45.0%
TAGGAGTTTGAAGACACGCT+TGG + chr4.4:11957764-11957783 MS.gene27963:intron 45.0%
TCACCAGTCAGATCCACATA+AGG - chr4.4:11960543-11960562 None:intergenic 45.0%
TCCCATCTGGATGATATCTG+CGG - chr4.4:11957595-11957614 None:intergenic 45.0%
TCTGCTAAGGAAGCTGTACA+TGG + chr4.4:11959744-11959763 MS.gene27963:CDS 45.0%
TCTTTCTCCTTAAGAGGGCA+AGG - chr4.4:11957866-11957885 None:intergenic 45.0%
TGAAGGAAGTGACATCTCAG+GGG + chr4.4:11958512-11958531 MS.gene27963:CDS 45.0%
TGAGGAAGAAAAGTAGGGCA+AGG + chr4.4:11957954-11957973 MS.gene27963:CDS 45.0%
TGTGGATCTGACTGGTGATA+TGG + chr4.4:11960545-11960564 MS.gene27963:CDS 45.0%
! CCGTCTTTGGAGGATATTGA+AGG + chr4.4:11958214-11958233 MS.gene27963:CDS 45.0%
! CTGATGCACAATTGACTCAG+TGG + chr4.4:11962033-11962052 MS.gene27963:CDS 45.0%
! GACTCGAGGACCAAACTTTT+TGG + chr4.4:11961873-11961892 MS.gene27963:CDS 45.0%
! GCAGCAATGAGGAAAGTACA+AGG - chr4.4:11959243-11959262 None:intergenic 45.0%
! GGTGACCCAAAAGTATGGTA+TGG + chr4.4:11959116-11959135 MS.gene27963:CDS 45.0%
! TGCTGGTGGTATTTCTGTCT+TGG + chr4.4:11960776-11960795 MS.gene27963:CDS 45.0%
!! ACTTCGATTCGGTTGAGGAA+AGG + chr4.4:11960085-11960104 MS.gene27963:CDS 45.0%
!! CAATGACTTCGATTCGGTTG+AGG + chr4.4:11960080-11960099 MS.gene27963:CDS 45.0%
!! CCTGAATAATGGATGGCGAA+AGG - chr4.4:11961596-11961615 None:intergenic 45.0%
!! CTTCGATTCGGTTGAGGAAA+GGG + chr4.4:11960086-11960105 MS.gene27963:CDS 45.0%
!! GCCCTACTTTTCTTCCTCAT+CGG - chr4.4:11957953-11957972 None:intergenic 45.0%
!! TATGGAGCTGACTTGGAAAC+TGG + chr4.4:11958369-11958388 MS.gene27963:CDS 45.0%
!! TCAACTTGCTGAATACGGGT+CGG - chr4.4:11957911-11957930 None:intergenic 45.0%
!!! TCTCAGGGGTTTTAGTTCCA+TGG + chr4.4:11958526-11958545 MS.gene27963:CDS 45.0%
!!! TTTTCTTCCTCATCGGCTCT+CGG - chr4.4:11957946-11957965 None:intergenic 45.0%
AAAGGGCCAAGAAATCCAGC+AGG - chr4.4:11961251-11961270 None:intergenic 50.0%
AAATTGTCCCTCCAGCTTGC+TGG + chr4.4:11957834-11957853 MS.gene27963:CDS 50.0%
AACATGCTGTTCCAAGGAGC+AGG - chr4.4:11959057-11959076 None:intergenic 50.0%
AACCACGTGCAATAGAAGCG+TGG + chr4.4:11960289-11960308 MS.gene27963:CDS 50.0%
AAGCTGGAGGAGGATGACAT+AGG + chr4.4:11961909-11961928 MS.gene27963:CDS 50.0%
ACATGCTGTTCCAAGGAGCA+GGG - chr4.4:11959056-11959075 None:intergenic 50.0%
ACGTGGGAAGCAGTCAAAGA+TGG + chr4.4:11957985-11958004 MS.gene27963:CDS 50.0%
ACTGGGGTGACCCAAAAGTA+TGG + chr4.4:11959111-11959130 MS.gene27963:CDS 50.0%
AGAGAGGCTTGAATGGCTTC+CGG + chr4.4:11960032-11960051 MS.gene27963:CDS 50.0%
AGGGCAAGGAAACGAAAACG+TGG + chr4.4:11957968-11957987 MS.gene27963:CDS 50.0%
ATAGCTCTCTAGGTGACTCG+AGG + chr4.4:11961859-11961878 MS.gene27963:CDS 50.0%
ATCGCACTGTCCAGCATTCT+GGG + chr4.4:11959544-11959563 MS.gene27963:CDS 50.0%
ATGCCGTACGGTTCAGCTAA+GGG - chr4.4:11957809-11957828 None:intergenic 50.0%
ATGTGACTGTGAGGACTGCT+AGG - chr4.4:11960471-11960490 None:intergenic 50.0%
CAGTGGCTTCAATTGTGCAG+AGG + chr4.4:11959611-11959630 MS.gene27963:CDS 50.0%
CGTGGGAAGCAGTCAAAGAT+GGG + chr4.4:11957986-11958005 MS.gene27963:CDS 50.0%
GATGTTGTGCAGTAGCTCCA+AGG - chr4.4:11961550-11961569 None:intergenic 50.0%
GCCGCAGATATCATCCAGAT+GGG + chr4.4:11957591-11957610 MS.gene27963:intron 50.0%
GGGCAAGGAAACGAAAACGT+GGG + chr4.4:11957969-11957988 MS.gene27963:CDS 50.0%
GGGTTGAGTGATGCCAAAGA+TGG + chr4.4:11958154-11958173 MS.gene27963:CDS 50.0%
TATCGCACTGTCCAGCATTC+TGG + chr4.4:11959543-11959562 MS.gene27963:CDS 50.0%
TATGCCGTACGGTTCAGCTA+AGG - chr4.4:11957810-11957829 None:intergenic 50.0%
TCTATCAGCACTTTCAGCGC+AGG - chr4.4:11962062-11962081 None:intergenic 50.0%
TCTGGATGATATCTGCGGCA+TGG - chr4.4:11957590-11957609 None:intergenic 50.0%
TGAACTAGACATGCCTCCCT+TGG + chr4.4:11961530-11961549 MS.gene27963:CDS 50.0%
TGCCGCAGATATCATCCAGA+TGG + chr4.4:11957590-11957609 MS.gene27963:intron 50.0%
TTCTCCTTAAGAGGGCAAGG+TGG - chr4.4:11957863-11957882 None:intergenic 50.0%
TTGTGCAGAGGCTGTGAATG+TGG + chr4.4:11959623-11959642 MS.gene27963:CDS 50.0%
TTTGGAAGAACACCCCAACG+AGG + chr4.4:11961422-11961441 MS.gene27963:CDS 50.0%
! AATTGTCCCTCCAGCTTGCT+GGG + chr4.4:11957835-11957854 MS.gene27963:CDS 50.0%
! ACCACGTGCAATAGAAGCGT+GGG + chr4.4:11960290-11960309 MS.gene27963:CDS 50.0%
! CGTCAGGACTTCCCTTTTTC+AGG - chr4.4:11961983-11962002 None:intergenic 50.0%
! GAAACTGGAGCACTTGGAAG+TGG + chr4.4:11958384-11958403 MS.gene27963:CDS 50.0%
! GACTTGGAAACTGGAGCACT+TGG + chr4.4:11958378-11958397 MS.gene27963:CDS 50.0%
! TTTCCAAGGGCATACCACTG+TGG + chr4.4:11959582-11959601 MS.gene27963:CDS 50.0%
AAGACGGTTGACGTCTCTCG+TGG - chr4.4:11958201-11958220 None:intergenic 55.0%
AAGCCACAGTGGTATGCCCT+TGG - chr4.4:11959588-11959607 None:intergenic 55.0%
ACTCGCAACCAACAGCAGAG+AGG - chr4.4:11960140-11960159 None:intergenic 55.0%
AGGAGCAGGGAATGAGAACG+CGG - chr4.4:11959043-11959062 None:intergenic 55.0%
ATAGCTGAAGCATGGCTCCC+AGG - chr4.4:11959146-11959165 None:intergenic 55.0%
ATAGGCCGACATGCTTCGAC+TGG - chr4.4:11957619-11957638 None:intergenic 55.0%
CGAGAGACGTCAACCGTCTT+TGG + chr4.4:11958201-11958220 MS.gene27963:CDS 55.0%
CGCATTGCTCGTAACTCGTC+AGG - chr4.4:11961999-11962018 None:intergenic 55.0%
CGTCCCTTAGCTGAACCGTA+CGG + chr4.4:11957803-11957822 MS.gene27963:CDS 55.0%
CGTTCTCATTCCCTGCTCCT+TGG + chr4.4:11959043-11959062 MS.gene27963:intron 55.0%
GAAACCGACTGATGAGGTCG+AGG + chr4.4:11958258-11958277 MS.gene27963:CDS 55.0%
GACTTGCACCTCTCTGCTGT+TGG + chr4.4:11960129-11960148 MS.gene27963:CDS 55.0%
GAGACGTCAACCGTCTTTGG+AGG + chr4.4:11958204-11958223 MS.gene27963:CDS 55.0%
GGGATCCAGTCGAAGCATGT+CGG + chr4.4:11957611-11957630 MS.gene27963:CDS 55.0%
GTGTGAAGTCTGGCCCTGAT+TGG - chr4.4:11958087-11958106 None:intergenic 55.0%
TACCACTGTGGCTTCAGCAG+TGG + chr4.4:11959594-11959613 MS.gene27963:CDS 55.0%
TCCCACGCTTCTATTGCACG+TGG - chr4.4:11960294-11960313 None:intergenic 55.0%
TCGCACTGTCCAGCATTCTG+GGG + chr4.4:11959545-11959564 MS.gene27963:CDS 55.0%
TGCTGGACAGTGCGATACAC+AGG - chr4.4:11959540-11959559 None:intergenic 55.0%
TGCTTCGACTGGATCCCATC+TGG - chr4.4:11957608-11957627 None:intergenic 55.0%
TTCAGAACCGAGAGCCGATG+AGG + chr4.4:11957936-11957955 MS.gene27963:CDS 55.0%
TTGTGCAGTAGCTCCAAGGG+AGG - chr4.4:11961546-11961565 None:intergenic 55.0%
AGCCACTGCTGAAGCCACAG+TGG - chr4.4:11959599-11959618 None:intergenic 60.0%
GGCTCCACCTTGCCCTCTTA+AGG + chr4.4:11957856-11957875 MS.gene27963:CDS 60.0%
CAAGGTGGAGCCCAGCAAGC+TGG - chr4.4:11957848-11957867 None:intergenic 65.0%
GTGGAGCCCAGCAAGCTGGA+GGG - chr4.4:11957844-11957863 None:intergenic 65.0%
GGTGGAGCCCAGCAAGCTGG+AGG - chr4.4:11957845-11957864 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 11957381 11962106 11957381 ID=MS.gene27963
chr4.4 mRNA 11957381 11962106 11957381 ID=MS.gene27963.t1;Parent=MS.gene27963
chr4.4 exon 11957381 11957425 11957381 ID=MS.gene27963.t1.exon1;Parent=MS.gene27963.t1
chr4.4 CDS 11957381 11957425 11957381 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11957598 11957675 11957598 ID=MS.gene27963.t1.exon2;Parent=MS.gene27963.t1
chr4.4 CDS 11957598 11957675 11957598 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11957767 11958279 11957767 ID=MS.gene27963.t1.exon3;Parent=MS.gene27963.t1
chr4.4 CDS 11957767 11958279 11957767 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11958363 11958584 11958363 ID=MS.gene27963.t1.exon4;Parent=MS.gene27963.t1
chr4.4 CDS 11958363 11958584 11958363 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11959071 11959232 11959071 ID=MS.gene27963.t1.exon5;Parent=MS.gene27963.t1
chr4.4 CDS 11959071 11959232 11959071 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11959495 11959863 11959495 ID=MS.gene27963.t1.exon6;Parent=MS.gene27963.t1
chr4.4 CDS 11959495 11959863 11959495 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11960012 11961074 11960012 ID=MS.gene27963.t1.exon7;Parent=MS.gene27963.t1
chr4.4 CDS 11960012 11961074 11960012 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11961174 11961277 11961174 ID=MS.gene27963.t1.exon8;Parent=MS.gene27963.t1
chr4.4 CDS 11961174 11961277 11961174 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11961417 11961614 11961417 ID=MS.gene27963.t1.exon9;Parent=MS.gene27963.t1
chr4.4 CDS 11961417 11961614 11961417 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
chr4.4 exon 11961741 11962106 11961741 ID=MS.gene27963.t1.exon10;Parent=MS.gene27963.t1
chr4.4 CDS 11961741 11962106 11961741 ID=cds.MS.gene27963.t1;Parent=MS.gene27963.t1
Gene Sequence

>MS.gene27963

ATGGAAAATACACTTGAATCTTCCATCAATCCACAACACAAAAAGGTATTTACTATGTTCTACCGTGTTGAGCACGTGTCTTGTTATACTCATTGAAGTCATTAACTAAATTATGTTTTTCAAACATTTTTCCTATAAATATATGTTTAGATATTCAAACGAAAAAGATTTTGAAATTGAATGTAACATGGTTATATATACTGTTGCCATGCCGCAGATATCATCCAGATGGGATCCAGTCGAAGCATGTCGGCCTATAATCGGTGAAACACCTGTGTTTTATCCAACATTTGAGGTACCTCTTAATTATCACTATCATGTACTATAGATTTTGGCGGTGGTAACATTGTTCTGTGAATCAATTTTAATTTTATTCTTCTCATTAGGAGTTTGAAGACACGCTTGGTTACCTAGCTAAGATACGTCCCTTAGCTGAACCGTACGGCATATGTAAAATTGTCCCTCCAGCTTGCTGGGCTCCACCTTGCCCTCTTAAGGAGAAAGAGATATGGGAAAATGCTAAATTTCCGACCCGTATTCAGCAAGTTGATTTGCTTCAGAACCGAGAGCCGATGAGGAAGAAAAGTAGGGCAAGGAAACGAAAACGTGGGAAGCAGTCAAAGATGGGAACGTGTAATAGGAGAACTGGAAATTCATGTTCTGAAGCTAATGCTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGGCCAGACTTCACACTCAAAGAATTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTCGGGTTGAGTGATGCCAAAGATGGTAAAGGTAGTGATAATAATCACCACGAGAGACGTCAACCGTCTTTGGAGGATATTGAAGGTGAATACTGGCGAATAATAGAGAAACCGACTGATGAGGTCGAGGTAATATTGTTGACAACATTGTTGGTTTTCAATGTAACATGTTTAAGAAAAAAAGTTTATATATTACTATACGATTTCTGTAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGACATCATCCTTAACTGAGAGTGATTCAGATTTGTATGCTATGTCTGGCTGGAATTTGAATAACTTTGCGCGACTTCCAGGTTCTGCATTATGTTTTGAAGGAAGTGACATCTCAGGGGTTTTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCTCATTTTGCTGGGTATGTAGTGAGAATTAATTTTTTGTTAGTCTTTTTTATATGAATGAAGAAAAGTTTAAGGCGTAAAAAACAATATCACTGATTTTTTTTTTTCTTTTCAGTTTGCATGTCTTCCTGTAGAGTTATATGTTTTTTTTTTTCCATGAAAGCTAAGTTGACAAATTTAAGGTTTGCTACTTTGCTCATTTTATAATAATTATAATCTAATTGAAGGTTAATGGAGAAAATAATTAGCTCGAACTACTTTAGACTAGAGAGAGATTGCTACCAATGCGATCATCAAATGATTTCTAATATTATAGATTTTTCAGTATGTAAGCACTCATAATATTTAAGGTTTCACTGCTTGTGTTGATTTGTTTGGAATGTTAACATATAACATAAGAAATAATATCTTGAACTTTGCATTACTTTTGTTTCAAATCTTTATACTTTCCTATAAAGAGTAATTAACACCGCGTTCTCATTCCCTGCTCCTTGGAACAGCATGTTGAAGATCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGTGTACCTGGGAGCCATGCTTCAGCTATAGAAGATGCAATGAGGAAACATTTGCCTGATTTGTTTGAAGAGCAACCAAATCTACTCAACGAGTTGGTATGATCCTTGTACTTTCCTCATTGCTGCTATTTTTTGGTTTCTTTTGCGCACTTTATCGTTTCCATGTACATAATTCGTGAACAAAGAGACATAGTTGATGCATAATGTATATTTTGTAGGCAGTTGCACTTATGAAAGTTAATTAAAAAACCAAAATCACGATGACATTTGGAATGTTCAAATTTTATATATCTTGATAAGTCTTTCCTTATTTTATATATCTTCTGATTGTAGTGGTTCTGATCGCATCTTTGTACAGGTGACTCAGTTCTCTCCTTCAATACTTAAGTCTGAGGAGGTTCCTGTGTATCGCACTGTCCAGCATTCTGGGGAATTTGTTATCACGTTTCCAAGGGCATACCACTGTGGCTTCAGCAGTGGCTTCAATTGTGCAGAGGCTGTGAATGTGGCTCCATATGATTGGTTTATGCATGGTCAGAACGCTGCAGAGATTTACAGTCTACAGTGCCGTAAGACATCCTTGTCCCATGATAAGTTGTTATTTGGATCTGCTAAGGAAGCTGTACATGGCCTTTCAGAGACAACTCTTCATGGAAAAGAAAATCTAAAATGTTTAAATTGGAGAAATGCTTGTGGGAAAGATGGTGTTCTTACCAATGCAGTTAAGGTAATGATTTTTGTGTGCCCTCTCCTCTTTGATTTGAACCCCTTTCATATATTTAGAAAAATCCGTAAAACTTTGGATGGTATTTATTATTTGATTTTATTTACCTTTTTTGTTTATATTTTTGTGTAATTATCCTTACTTTTGACAGACAAGGATAATGATGGAAAAAGAGAGGCTTGAATGGCTTCCGGATCATTTAAAGATGCTGAAGATGGACAATGACTTCGATTCGGTTGAGGAAAGGGAATGTTACTATTGCTTCTATGACTTGCACCTCTCTGCTGTTGGTTGCGAGTGCTTTCCTGATAACTATTCTTGTCTTAGACATTTCAAGTTGTTTTGCTCATGTGAAATGGATAAAAGATTTGTTCTGGTTCGTTATACAATAGATGAGCTAAGTACATTGGTTGAAGCATTAGAAGGAGAACCACGTGCAATAGAAGCGTGGGAAACTAGAAACATTGGAGTTGTTTCTGCTAGTGTTGAGGATGCTTGCATGCACGAACAAGATATGGAGAGAGTCATGTGCAAAACTGAGAATTACAAAGAAGGGAAAAGATCGCCTTCTTGTACAGGAACTAATGAGAGGTTAAATTCAAATTTACCTAGCAGTCCTCACAGTCACATTTCTTCAGAGTTGGTCCATTCAGAGTCTCATCATGAAACTTCTCGTACACCTTATGTGGATCTGACTGGTGATATGGACAACTTGAATGATACTATGTTGGTCATGGACAATAAAGTTAAGGAGGATAAGGGAAGTTCTTTGTATTTGAATATTGGTGATATCTCTGATAAACCTGCAAATTCTTTGCTAAATATAGCCGAAATCCGTCACAATAAGTGTGTTCCATATGCGGAAAAAGTTACTAGTGCAGAGATCAGAAAAGAACGAGACAACATAGAACTTAGTGCTGGTGGTATTTCTGTCTTGGAAAATGAACCTTCACCATGTCCAACTAATGTTCGAAATTCCGGTACACTTGATGGTTGTAAATTGTTTGGTGTCAATCTGCAAATGCACTCAGATTTAGGACAGAAACTTAATAGTATGCTTGAAACGGGAGTTCTAGACACCTCCAATACAAATATATCTTTGACAAACCAAAGCTCCCCAATGAAAAAGTTTAGTATTTCGGTTGAGCTTGTTAGTTTGGGATCTGTTGTGTATGGAAAACATTGGTGCAGTAAGCATGCAATATATCCAAAAGGTACGCTTTCTGTAACATCTTTTCCGGTCTTAGATTGTTCTTTTATTTTTTTTTATTTTTGAGTTTAACTTTTCTTTTTCTTTTGGTGAAATTATGAAGGATTCAAGAGTCGTGTAAAGTTCTTTAGCATTCTTGATCCATCAAGCATCTGTAACTATGTTTGTGAAGTCATTCCTGCTGGATTTCTTGGCCCTTTTTTCAGGGTATCATTCCTGACCTTGTTTCTGTTTTAAGCTCAAAATCATATTGACATGTTTCTGTTACTAGATATATGTTATTTGCATTGACTTGTATTGCGATTGAAGTATATTTCTTTCTCTTTCAATAAAAAATATATTCCAGGTTACTTTGGAAGAACACCCCAACGAGGTTTTCACAAACACTTCAGCAGATAAGTGCTGGGAATCTGTTATTGATAGACTAAACTATGAAATAAATAAGCGCAAGAGTCTCGGTGAACTAGACATGCCTCCCTTGGAGCTACTGCACAACATCAATGGTCATAAAATGTTTGGATTCCTTTCGCCATCCATTATTCAGGTAATGCAAACTCGCAAAATCTTTAAGACGTTAATGTCCTTTTTTAGCTTACACCTAACATTAGTACCATAGACGTATATATTATAAGTTTTGATGTTTCTAATCCATTATGATAAACTGTTTCAGTCCATTGAAGCTCAAGATCCCAGTCATGAATGTGTAGGGTACTGGAATCACAAACAAGTTAATTCTGGATCTTCAGGCAAAGCCATTGATGACTCTAAGTTAACTTGTGGTTCAAGTAATAGCTCTCTAGGTGACTCGAGGACCAAACTTTTTGGTGTCGATTTGATAAAGCTGGAGGAGGATGACATAGGAGAAAGTTCTCATTCGTTTGAAGAGATGAAGTTGATTCTAGAAAGATTCCTGAAAAAGGGAAGTCCTGACGAGTTACGAGCAATGCGTCAGTTATTCAGTTCTGATGCACAATTGACTCAGTGGAGACCTGCGCTGAAAGTGCTGATAGAGAAAATCCAGAAAGATTGTGAATAA
Protein sequence

>MS.gene27963.t1

MENTLESSINPQHKKISSRWDPVEACRPIIGETPVFYPTFEEFEDTLGYLAKIRPLAEPYGICKIVPPACWAPPCPLKEKEIWENAKFPTRIQQVDLLQNREPMRKKSRARKRKRGKQSKMGTCNRRTGNSCSEANATSESDDKFGFQSGPDFTLKEFQQYGNSFKDCYFGLSDAKDGKGSDNNHHERRQPSLEDIEGEYWRIIEKPTDEVEVYYGADLETGALGSGFPKTSSLTESDSDLYAMSGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASAIEDAMRKHLPDLFEEQPNLLNELVTQFSPSILKSEEVPVYRTVQHSGEFVITFPRAYHCGFSSGFNCAEAVNVAPYDWFMHGQNAAEIYSLQCRKTSLSHDKLLFGSAKEAVHGLSETTLHGKENLKCLNWRNACGKDGVLTNAVKTRIMMEKERLEWLPDHLKMLKMDNDFDSVEERECYYCFYDLHLSAVGCECFPDNYSCLRHFKLFCSCEMDKRFVLVRYTIDELSTLVEALEGEPRAIEAWETRNIGVVSASVEDACMHEQDMERVMCKTENYKEGKRSPSCTGTNERLNSNLPSSPHSHISSELVHSESHHETSRTPYVDLTGDMDNLNDTMLVMDNKVKEDKGSSLYLNIGDISDKPANSLLNIAEIRHNKCVPYAEKVTSAEIRKERDNIELSAGGISVLENEPSPCPTNVRNSGTLDGCKLFGVNLQMHSDLGQKLNSMLETGVLDTSNTNISLTNQSSPMKKFSISVELVSLGSVVYGKHWCSKHAIYPKGFKSRVKFFSILDPSSICNYVCEVIPAGFLGPFFRVTLEEHPNEVFTNTSADKCWESVIDRLNYEINKRKSLGELDMPPLELLHNINGHKMFGFLSPSIIQSIEAQDPSHECVGYWNHKQVNSGSSGKAIDDSKLTCGSSNSSLGDSRTKLFGVDLIKLEEDDIGESSHSFEEMKLILERFLKKGSPDELRAMRQLFSSDAQLTQWRPALKVLIEKIQKDCE