AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28283

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28283.t1 MTR_2g024430 88.932 515 54 2 1 512 1 515 0.0 947
MS.gene28283.t1 MTR_5g040880 59.922 514 188 8 13 511 4 514 0.0 570
MS.gene28283.t1 MTR_5g082140 53.770 504 181 7 9 506 1 458 3.11e-176 504
MS.gene28283.t1 MTR_5g040740 53.346 508 129 9 9 511 1 405 8.88e-167 478
MS.gene28283.t1 MTR_5g061220 50.554 542 210 12 7 511 6 526 1.29e-166 482
MS.gene28283.t1 MTR_1g058210 45.866 508 197 14 9 504 1 442 1.71e-132 392
MS.gene28283.t1 MTR_2g006270 45.365 507 206 11 13 510 6 450 6.17e-128 380
MS.gene28283.t1 MTR_3g073420 43.113 559 251 12 10 511 9 557 1.00e-126 382
MS.gene28283.t1 MTR_2g006380 41.584 505 219 15 14 510 14 450 1.22e-110 336
MS.gene28283.t1 MTR_5g060630 40.901 533 222 18 9 464 1 517 2.06e-100 312
MS.gene28283.t1 MTR_5g460740 40.901 533 222 18 9 464 1 517 2.06e-100 312
MS.gene28283.t1 MTR_5g061890 49.598 373 153 14 9 362 1 357 8.87e-100 306
MS.gene28283.t1 MTR_5g060780 50.712 351 139 13 9 340 1 336 6.58e-99 304
MS.gene28283.t1 MTR_5g460920 50.712 351 139 13 9 340 1 336 3.10e-98 302
MS.gene28283.t1 MTR_2g094570 40.394 406 167 11 17 361 8 399 2.37e-87 282
MS.gene28283.t1 MTR_2g094570 40.394 406 167 11 17 361 8 399 2.86e-87 283
MS.gene28283.t1 MTR_2g094570 39.952 418 175 12 5 361 53 455 5.92e-87 283
MS.gene28283.t1 MTR_1g064430 40.394 406 173 10 17 360 24 422 4.57e-85 277
MS.gene28283.t1 MTR_1g064430 40.394 406 173 10 17 360 37 435 4.73e-85 277
MS.gene28283.t1 MTR_4g058930 39.320 412 179 10 9 358 1 403 1.18e-83 273
MS.gene28283.t1 MTR_1g094960 35.742 512 243 15 17 464 16 505 1.72e-83 271
MS.gene28283.t1 MTR_4g058930 39.320 412 179 10 9 358 1 403 3.05e-83 272
MS.gene28283.t1 MTR_7g101280 37.500 416 176 12 17 361 28 430 4.30e-76 252
MS.gene28283.t1 MTR_0041s0110 37.500 416 176 12 17 361 28 430 4.30e-76 252
MS.gene28283.t1 MTR_5g062970 53.571 196 85 2 20 213 38 229 2.75e-64 209
MS.gene28283.t1 MTR_7g101275 40.312 320 152 10 30 325 2 306 2.27e-63 212
MS.gene28283.t1 MTR_2g014770 35.958 381 205 12 11 365 45 412 6.98e-59 205
MS.gene28283.t1 MTR_2g014770 35.958 381 205 12 11 365 45 412 2.47e-58 205
MS.gene28283.t1 MTR_0041s0120 38.889 324 163 9 30 325 2 318 5.96e-58 198
MS.gene28283.t1 MTR_4g088210 31.947 457 255 13 20 446 38 468 4.03e-56 199
MS.gene28283.t1 MTR_4g088210 31.947 457 255 13 20 446 38 468 4.69e-56 199
MS.gene28283.t1 MTR_2g093740 34.140 372 200 12 20 358 56 415 1.05e-53 192
MS.gene28283.t1 MTR_2g093740 34.140 372 200 12 20 358 56 415 2.07e-53 192
MS.gene28283.t1 MTR_2g093740 34.140 372 200 12 20 358 56 415 3.00e-53 192
MS.gene28283.t1 MTR_2g005240 35.127 353 197 11 20 350 23 365 1.63e-51 186
MS.gene28283.t1 MTR_4g021580 33.241 361 209 11 20 358 19 369 7.48e-51 184
MS.gene28283.t1 MTR_8g100050 34.722 360 209 10 20 359 59 412 8.57e-51 185
MS.gene28283.t1 MTR_4g021580 33.241 361 209 11 20 358 19 369 1.15e-50 184
MS.gene28283.t1 MTR_8g100050 34.722 360 209 10 20 359 59 412 1.82e-50 185
MS.gene28283.t1 MTR_2g093740 32.987 385 200 13 20 358 56 428 3.02e-50 183
MS.gene28283.t1 MTR_2g018690 34.341 364 199 12 11 345 11 363 4.75e-50 184
MS.gene28283.t1 MTR_2g093740 32.987 385 200 13 20 358 56 428 5.60e-50 183
MS.gene28283.t1 MTR_8g027440 34.444 360 204 11 20 358 29 377 6.65e-50 182
MS.gene28283.t1 MTR_2g093740 32.987 385 200 13 20 358 56 428 8.05e-50 183
MS.gene28283.t1 MTR_7g062540 33.333 366 201 13 20 358 14 363 4.19e-49 179
MS.gene28283.t1 MTR_4g060460 32.737 391 233 9 20 383 54 441 7.91e-49 180
MS.gene28283.t1 MTR_2g043250 31.831 355 195 11 17 341 20 357 1.29e-48 181
MS.gene28283.t1 MTR_4g060460 33.791 364 212 8 20 358 54 413 1.54e-48 179
MS.gene28283.t1 MTR_5g060770 38.109 349 153 13 71 405 8 307 2.53e-48 171
MS.gene28283.t1 MTR_4g124900 32.011 353 193 11 17 339 20 355 8.69e-48 178
MS.gene28283.t1 MTR_5g076270 34.000 350 198 10 20 345 24 364 8.84e-48 177
MS.gene28283.t1 MTR_4g124900 32.011 353 193 11 17 339 20 355 9.09e-48 178
MS.gene28283.t1 MTR_3g064050 33.714 350 199 10 20 345 26 366 7.35e-47 175
MS.gene28283.t1 MTR_8g079492 34.153 366 196 15 11 345 11 362 1.33e-46 174
MS.gene28283.t1 MTR_8g079492 34.153 366 196 15 11 345 11 362 1.36e-46 174
MS.gene28283.t1 MTR_1g024025 34.957 349 183 14 20 339 43 376 4.93e-46 173
MS.gene28283.t1 MTR_8g101360 31.831 355 199 12 17 342 28 368 9.35e-45 169
MS.gene28283.t1 MTR_2g093740 36.653 251 138 7 124 358 40 285 2.14e-41 157
MS.gene28283.t1 MTR_2g093740 36.653 251 138 7 124 358 40 285 2.99e-41 157
MS.gene28283.t1 MTR_8g079492 35.315 286 156 11 81 345 3 280 1.85e-38 150
MS.gene28283.t1 MTR_2g093740 34.848 264 138 8 124 358 40 298 5.48e-38 147
MS.gene28283.t1 MTR_2g093740 34.848 264 138 8 124 358 40 298 6.65e-38 148
MS.gene28283.t1 MTR_5g062960 41.827 208 91 8 240 440 3 187 2.22e-36 134
MS.gene28283.t1 MTR_8g446900 28.470 281 182 6 72 339 14 288 2.59e-30 122
MS.gene28283.t1 MTR_5g460910 32.092 349 152 14 71 405 25 302 1.69e-28 116
MS.gene28283.t1 MTR_5g046120 42.623 122 64 2 52 170 5 123 1.35e-18 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28283.t1 AT1G77850 37.868 544 262 16 9 489 1 531 1.72e-102 320
MS.gene28283.t1 AT1G77850 37.868 544 262 16 9 489 1 531 1.73e-102 319
MS.gene28283.t1 AT4G30080 40.376 426 173 14 17 379 16 423 1.94e-83 272
MS.gene28283.t1 AT2G28350 39.183 416 176 12 13 363 3 406 6.23e-81 266
MS.gene28283.t1 AT2G28350 39.183 416 176 12 13 363 3 406 6.37e-81 265
MS.gene28283.t1 AT2G46530 35.695 367 193 15 20 358 21 372 1.47e-55 196
MS.gene28283.t1 AT2G46530 35.695 367 193 15 20 358 42 393 3.93e-55 195
MS.gene28283.t1 AT3G61830 35.588 340 189 12 20 339 25 354 4.45e-54 192
MS.gene28283.t1 AT5G37020 34.375 352 194 10 20 345 22 362 4.26e-52 189
MS.gene28283.t1 AT1G35520 35.770 383 213 14 3 365 10 379 4.33e-52 186
MS.gene28283.t1 AT5G37020 34.375 352 194 10 20 345 22 362 7.74e-52 189
MS.gene28283.t1 AT4G23980 34.218 339 196 9 20 339 12 342 8.61e-52 186
MS.gene28283.t1 AT2G33860 35.072 345 189 10 20 339 54 388 8.68e-52 186
MS.gene28283.t1 AT4G23980 34.218 339 196 9 20 339 12 342 9.12e-52 186
MS.gene28283.t1 AT1G34390 35.638 376 207 15 3 358 10 370 4.15e-50 181
MS.gene28283.t1 AT1G34310 35.263 380 205 14 3 358 10 372 6.44e-50 181
MS.gene28283.t1 AT1G34410 34.204 383 219 13 3 365 10 379 6.50e-50 181
MS.gene28283.t1 AT5G60450 35.135 370 206 13 15 356 36 399 6.59e-50 183
MS.gene28283.t1 AT1G59750 34.503 342 192 11 20 339 22 353 1.16e-49 181
MS.gene28283.t1 AT1G59750 34.503 342 192 11 20 339 22 353 1.54e-49 181
MS.gene28283.t1 AT1G59750 34.503 342 192 11 20 339 22 353 1.54e-49 181
MS.gene28283.t1 AT1G59750 34.503 342 192 11 20 339 22 353 1.55e-49 181
MS.gene28283.t1 AT5G60450 35.342 365 202 13 20 356 65 423 1.79e-49 182
MS.gene28283.t1 AT5G62000 33.983 359 211 10 20 358 61 413 2.22e-49 182
MS.gene28283.t1 AT5G62000 33.983 359 211 10 20 358 61 413 2.22e-49 182
MS.gene28283.t1 AT5G62000 33.983 359 211 10 20 358 61 413 2.22e-49 182
MS.gene28283.t1 AT5G62000 33.983 359 211 10 20 358 61 413 2.22e-49 182
MS.gene28283.t1 AT5G62000 33.983 359 211 10 20 358 61 413 2.74e-49 182
MS.gene28283.t1 AT1G30330 34.160 363 201 11 12 345 10 363 5.92e-49 181
MS.gene28283.t1 AT1G30330 33.973 365 201 11 12 345 10 365 1.71e-48 180
MS.gene28283.t1 AT1G30330 33.973 365 201 11 12 345 10 365 1.71e-48 180
MS.gene28283.t1 AT1G35540 34.181 354 205 12 3 339 10 352 2.53e-48 176
MS.gene28283.t1 AT1G35240 34.492 374 216 13 3 358 10 372 2.66e-47 173
MS.gene28283.t1 AT1G19850 34.530 362 174 14 17 339 40 377 5.37e-47 176
MS.gene28283.t1 AT1G19850 34.530 362 174 14 17 339 51 388 6.24e-47 175
MS.gene28283.t1 AT5G20730 31.161 353 197 10 17 339 21 357 7.99e-45 169
MS.gene28283.t1 AT5G20730 31.161 353 197 10 17 339 21 357 8.08e-45 169
MS.gene28283.t1 AT1G19220 31.549 355 196 12 17 341 20 357 1.26e-44 169
MS.gene28283.t1 AT5G20730 31.161 353 196 11 17 339 21 356 1.39e-43 166
MS.gene28283.t1 AT3G61830 36.140 285 156 10 72 339 28 303 2.16e-42 159
MS.gene28283.t1 AT1G34170 31.868 364 200 13 20 356 25 367 5.92e-41 154
MS.gene28283.t1 AT2G46530 36.900 271 144 10 106 358 24 285 1.19e-40 154
MS.gene28283.t1 AT2G33860 37.931 232 124 7 124 339 4 231 1.38e-40 152
MS.gene28283.t1 AT5G37020 36.100 241 129 8 124 345 33 267 9.14e-38 147
MS.gene28283.t1 AT1G34170 32.958 355 182 15 20 356 25 341 1.02e-35 139
MS.gene28283.t1 AT1G34170 32.958 355 182 15 20 356 25 341 1.98e-35 139
MS.gene28283.t1 AT1G43950 36.957 230 120 7 2 222 9 222 5.25e-32 122
MS.gene28283.t1 AT4G01500 30.597 134 90 1 124 257 38 168 1.57e-11 66.2

Find 137 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGTTCATTTATGCTATT+TGG 0.105998 2.1:-64777120 MS.gene28283:CDS
AACATTAGCACATCTATATT+TGG 0.209645 2.1:-64777231 MS.gene28283:CDS
AATATATATTATAGGTTAAC+TGG 0.211032 2.1:-64777611 MS.gene28283:intron
GGAGACATGGCGGAAATATT+TGG 0.255210 2.1:+64779331 None:intergenic
CTTCCAACTCTTTCAATGAT+AGG 0.271660 2.1:-64777314 MS.gene28283:CDS
TTCTTTGGTGCTGCACTTGT+GGG 0.284414 2.1:+64777149 None:intergenic
TGAACCAGGATTAACTTCTT+TGG 0.304162 2.1:+64777134 None:intergenic
AGGGATAGGGTTTCAGTGTT+GGG 0.310433 2.1:+64779178 None:intergenic
ACCTCCCAAGGGCTTTGCTT+TGG 0.312781 2.1:+64777564 None:intergenic
GACACCTGATCACCACTAAT+TGG 0.319561 2.1:-64778790 MS.gene28283:CDS
GCACAGCACCGCCAAATCTT+TGG 0.331450 2.1:+64779286 None:intergenic
CCGACGTTCATGGCAAAGTC+TGG 0.342190 2.1:-64778847 MS.gene28283:CDS
TACAATTGCCCTCAGCAAAA+AGG 0.346652 2.1:-64777509 MS.gene28283:CDS
TTTGGATTATGTGAGACTTC+AGG 0.376866 2.1:+64777582 None:intergenic
ATCCAACAATGTTTGATTCA+AGG 0.377439 2.1:+64777398 None:intergenic
AGGATGCAATGAAGATTAAC+TGG 0.377747 2.1:-64778526 MS.gene28283:CDS
AATCTTTGGTTCTACACGGC+TGG 0.380640 2.1:+64779300 None:intergenic
ATCCGTCGGCATACTAAGTT+TGG 0.389012 2.1:-64778680 MS.gene28283:CDS
ATCCTTGAATCAAACATTGT+TGG 0.389726 2.1:-64777400 MS.gene28283:CDS
ACCCTATCTGATGCTAATAA+TGG 0.393308 2.1:-64778962 MS.gene28283:CDS
CTTCTTTGGTGCTGCACTTG+TGG 0.393725 2.1:+64777148 None:intergenic
CCCTTTGAGACAAAGTTTGA+CGG 0.397840 2.1:-64777174 MS.gene28283:CDS
CACCATTATTAGCATCAGAT+AGG 0.401174 2.1:+64778960 None:intergenic
AATATAGATGTGCTAATGTT+TGG 0.410256 2.1:+64777234 None:intergenic
CTGTCTGTTACCGACGTTCA+TGG 0.414559 2.1:-64778857 MS.gene28283:CDS
CCGTCAAACTTTGTCTCAAA+GGG 0.416058 2.1:+64777174 None:intergenic
GGTGATGAAATTGTTTCCTC+TGG 0.421466 2.1:-64778995 MS.gene28283:CDS
GGGATAGGGTTTCAGTGTTG+GGG 0.425954 2.1:+64779179 None:intergenic
GCCGTGTAGAACCAAAGATT+TGG 0.431938 2.1:-64779297 MS.gene28283:CDS
TACTCCAATTAGTGGTGATC+AGG 0.433415 2.1:+64778786 None:intergenic
AGCATGCGCCATGGACGATT+AGG 0.434996 2.1:+64778410 None:intergenic
TCATCTGGAGATATGTTTGT+TGG 0.440275 2.1:-64778704 MS.gene28283:CDS
GAAACCCTATCCCTTCTTGA+TGG 0.440854 2.1:-64779169 MS.gene28283:CDS
AACCATCAGTGATGGGAGTT+AGG 0.442469 2.1:+64779062 None:intergenic
CATGTTCTAAGTGACCTTGC+GGG 0.450390 2.1:+64779215 None:intergenic
CAAGGGAGAAGATGGTTGTA+TGG 0.451305 2.1:-64777052 MS.gene28283:CDS
ATCTTTGGTTCTACACGGCT+GGG 0.452340 2.1:+64779301 None:intergenic
CACGAACTTACTCCAATTAG+TGG 0.453246 2.1:+64778778 None:intergenic
AAGATTTGGCGGTGCTGTGC+CGG 0.454060 2.1:-64779283 MS.gene28283:CDS
GAGATGGCTGTTTAGTTTCG+AGG 0.456957 2.1:+64778885 None:intergenic
AAGGGATAGGGTTTCAGTGT+TGG 0.458344 2.1:+64779177 None:intergenic
TCATGCAAATTACTTCCAAC+AGG 0.463742 2.1:+64777084 None:intergenic
TTCAAAATGCTATGGTTAAG+AGG 0.466292 2.1:+64777198 None:intergenic
GGTTCTACACGGCTGGGTTG+TGG 0.468361 2.1:+64779307 None:intergenic
TTTCAATCCTTGCATTGTAT+CGG 0.468436 2.1:-64779137 MS.gene28283:CDS
GAGTATTATCCTACGATTGA+AGG 0.470883 2.1:-64778584 MS.gene28283:CDS
TTTCTCTATATTATCTAATG+AGG 0.471168 2.1:+64777464 None:intergenic
TTCCAACTCTTTCAATGATA+GGG 0.473757 2.1:-64777313 MS.gene28283:CDS
ACAAAGACTTCATCAGTATG+AGG 0.479542 2.1:+64779094 None:intergenic
GATAGGGTTTCAGTGTTGGG+GGG 0.483168 2.1:+64779181 None:intergenic
GGTTACGGCGGCAGCGGAGT+TGG 0.497336 2.1:-64778633 MS.gene28283:CDS
ACCGTCAAACTTTGTCTCAA+AGG 0.497762 2.1:+64777173 None:intergenic
CATTGCATCCTCAACAACCT+TGG 0.498204 2.1:+64778538 None:intergenic
GGATAGGGTTTCAGTGTTGG+GGG 0.498312 2.1:+64779180 None:intergenic
GGCCCTATCATTGAAAGAGT+TGG 0.504567 2.1:+64777311 None:intergenic
AGAATCGGTTACGGCGGCAG+CGG 0.508900 2.1:-64778639 MS.gene28283:CDS
CTGGAAATCTATCATTGGAA+TGG 0.511209 2.1:+64777437 None:intergenic
TCTGCTACCAAGGGAGAAGA+TGG 0.513250 2.1:-64777060 MS.gene28283:CDS
GAATGCTGGAAATCTATCAT+TGG 0.515653 2.1:+64777432 None:intergenic
GAAATATTTGGTTCTACCAT+CGG 0.518665 2.1:+64779343 None:intergenic
TGCTAAGATAACTAAAGAAT+CGG 0.520496 2.1:-64778654 MS.gene28283:CDS
CGTGACCATCAAGAAGGGAT+AGG 0.523750 2.1:+64779164 None:intergenic
TTTGCATGATTCTGCTACCA+AGG 0.526896 2.1:-64777070 MS.gene28283:CDS
GCTGGGTTGTGGTGGAGACA+TGG 0.530128 2.1:+64779318 None:intergenic
ATATTATAGGTTAACTGGGA+TGG 0.530339 2.1:-64777606 MS.gene28283:intron
AGTGGTGATCAGGTGTCTCA+AGG 0.534349 2.1:+64778796 None:intergenic
TAATCCAAAGCAAAGCCCTT+GGG 0.536094 2.1:-64777568 MS.gene28283:CDS
GTATGGGCTGCAATAATTGA+AGG 0.536513 2.1:-64777035 None:intergenic
GAAATTAGTTCAACCTCCCA+AGG 0.540471 2.1:+64777552 None:intergenic
ATGAAGATTAACTGGAATTG+TGG 0.543117 2.1:-64778518 MS.gene28283:CDS
CACTAATTGGAGTAAGTTCG+TGG 0.543836 2.1:-64778777 MS.gene28283:CDS
GATACAATGCAAGGATTGAA+AGG 0.544112 2.1:+64779139 None:intergenic
CAAAGGGGTTCAAAATGCTA+TGG 0.546020 2.1:+64777190 None:intergenic
CTCCTAACTCCCATCACTGA+TGG 0.547018 2.1:-64779064 MS.gene28283:CDS
GATAACTAAAGAATCGGTTA+CGG 0.547321 2.1:-64778648 MS.gene28283:CDS
ATAATCCAAAGCAAAGCCCT+TGG 0.548641 2.1:-64777569 MS.gene28283:CDS
ACCATTATTAGCATCAGATA+GGG 0.549720 2.1:+64778961 None:intergenic
CATACAACCATCTTCTCCCT+TGG 0.552659 2.1:+64777053 None:intergenic
TCGTCCATGGCGCATGCTTG+AGG 0.553392 2.1:-64778405 MS.gene28283:intron
ATGATGATTCTTCAAAGAGA+TGG 0.554351 2.1:-64778469 MS.gene28283:CDS
TCTCTGCTCCTAATCGTCCA+TGG 0.557073 2.1:-64778418 MS.gene28283:CDS
TTGCATGATTCTGCTACCAA+GGG 0.558661 2.1:-64777069 MS.gene28283:CDS
TCTTTGGTGCTGCACTTGTG+GGG 0.558880 2.1:+64777150 None:intergenic
GTGTAGAACCAAAGATTTGG+CGG 0.559765 2.1:-64779294 MS.gene28283:CDS
GGCAATTGTAGATTCAGTGC+AGG 0.560065 2.1:+64777522 None:intergenic
TCCTACTGAGGTTCGTGAAG+AGG 0.565181 2.1:-64779026 MS.gene28283:CDS
AGTATTATCCTACGATTGAA+GGG 0.565286 2.1:-64778583 MS.gene28283:CDS
AAGGGAGAAGATGGTTGTAT+GGG 0.567406 2.1:-64777051 MS.gene28283:CDS
GGTGGATGCCAAGGTTGTTG+AGG 0.569678 2.1:-64778546 MS.gene28283:CDS
TCACAAAACCCTTCAATCGT+AGG 0.570407 2.1:+64778575 None:intergenic
CGACGTTCATGGCAAAGTCT+GGG 0.573902 2.1:-64778846 MS.gene28283:CDS
TGTTCACGAACCTCCTACTG+AGG 0.580009 2.1:-64779038 MS.gene28283:CDS
GTGAACACAACCATCAGTGA+TGG 0.580232 2.1:+64779054 None:intergenic
CCAAATAGCATAAATGAACC+AGG 0.581265 2.1:+64777120 None:intergenic
AGCACCAAAGAAGTTAATCC+TGG 0.583231 2.1:-64777138 MS.gene28283:CDS
TCTTCACGAACCTCAGTAGG+AGG 0.584861 2.1:+64779028 None:intergenic
AAAGTTTACTATTTCCCGCA+AGG 0.585623 2.1:-64779229 MS.gene28283:CDS
GTGACCATCAAGAAGGGATA+GGG 0.586087 2.1:+64779165 None:intergenic
ATATGTTTGTTGGAATCCGT+CGG 0.586941 2.1:-64778694 MS.gene28283:CDS
GTTCGTGAAGAGGAACCTAC+AGG 0.587140 2.1:-64779016 MS.gene28283:CDS
TCTACACGGCTGGGTTGTGG+TGG 0.587866 2.1:+64779310 None:intergenic
GTGGTGATCAGGTGTCTCAA+GGG 0.590017 2.1:+64778797 None:intergenic
GACTTCATCAGTATGAGGAT+CGG 0.593232 2.1:+64779099 None:intergenic
GAAACAATTTCATCACCTGT+AGG 0.594064 2.1:+64779001 None:intergenic
ATATATATTATAGGTTAACT+GGG 0.595356 2.1:-64777610 MS.gene28283:intron
AGGGAGTTCCACGGTAGACA+TGG 0.596664 2.1:+64778816 None:intergenic
CTATCCCTTCTTGATGGTCA+CGG 0.597434 2.1:-64779163 MS.gene28283:CDS
AAGGACCGTGACCATCAAGA+AGG 0.601243 2.1:+64779158 None:intergenic
TGTTTAGTTTCGAGGTCAAG+CGG 0.603245 2.1:+64778893 None:intergenic
GGTAAGATGATACATCCTGT+TGG 0.604159 2.1:-64777099 MS.gene28283:CDS
TAGTTTCGAGGTCAAGCGGT+GGG 0.611231 2.1:+64778897 None:intergenic
TGAACACAACCATCAGTGAT+GGG 0.614197 2.1:+64779055 None:intergenic
GCATGTTCTAAGTGACCTTG+CGG 0.616291 2.1:+64779214 None:intergenic
GCCAAATCTTTGGTTCTACA+CGG 0.618346 2.1:+64779296 None:intergenic
ATTGATGTCGCGCAAGAACG+AGG 0.619010 2.1:+64778923 None:intergenic
TCCTCTTCACGAACCTCAGT+AGG 0.621000 2.1:+64779025 None:intergenic
AGAGTTGGAAGTAGTTCCTG+TGG 0.623129 2.1:+64777326 None:intergenic
TATACCTCAAGCATGCGCCA+TGG 0.631418 2.1:+64778401 None:intergenic
TCCAAAGCAAAGCCCTTGGG+AGG 0.633549 2.1:-64777565 MS.gene28283:CDS
AAATTAGTTCAACCTCCCAA+GGG 0.635245 2.1:+64777553 None:intergenic
CACCAAACTTAGTATGCCGA+CGG 0.637276 2.1:+64778678 None:intergenic
GTAACAGACAGTTCTTGAGA+TGG 0.639997 2.1:+64778869 None:intergenic
AGGACCGTGACCATCAAGAA+GGG 0.643039 2.1:+64779159 None:intergenic
CTATCTGATGCTAATAATGG+TGG 0.650418 2.1:-64778959 MS.gene28283:CDS
AAAAGGCTTAGAGTTGCTCA+GGG 0.650442 2.1:-64777492 MS.gene28283:CDS
AACTAAAGAATCGGTTACGG+CGG 0.654777 2.1:-64778645 MS.gene28283:CDS
TGTCGCGCAAGAACGAGGTA+CGG 0.658162 2.1:+64778928 None:intergenic
GACGAAAAGAAACTCGTCTG+CGG 0.661354 2.1:-64778755 MS.gene28283:CDS
GGGTTGTGGTGGAGACATGG+CGG 0.664200 2.1:+64779321 None:intergenic
GAGTTTCGCCATGTCTACCG+TGG 0.667413 2.1:-64778824 MS.gene28283:CDS
CGTCAAACTTTGTCTCAAAG+GGG 0.667527 2.1:+64777175 None:intergenic
TCAACGGCCGATACAATGCA+AGG 0.667965 2.1:+64779130 None:intergenic
AGGATCGGCGAGGTAATCAA+CGG 0.669436 2.1:+64779114 None:intergenic
GGTGTCTCAAGGGAGTTCCA+CGG 0.685317 2.1:+64778807 None:intergenic
CCAGACTTTGCCATGAACGT+CGG 0.685939 2.1:+64778847 None:intergenic
TTAGTTTCGAGGTCAAGCGG+TGG 0.704813 2.1:+64778896 None:intergenic
CATCAGTATGAGGATCGGCG+AGG 0.728455 2.1:+64779104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATTATAGGTTAAC+TGG - chr2.1:64778767-64778786 MS.gene28283:CDS 15.0%
!! ATATATATTATAGGTTAACT+GGG - chr2.1:64778768-64778787 MS.gene28283:CDS 15.0%
!! ATCATATAAATGATTAATGT+TGG - chr2.1:64778723-64778742 MS.gene28283:CDS 15.0%
!! TTCATCTCAATATATATTAT+AGG - chr2.1:64778759-64778778 MS.gene28283:CDS 15.0%
!! AAAAAACAACAACGATATAT+TGG + chr2.1:64778445-64778464 None:intergenic 20.0%
!! AAAAACAACAACGATATATT+GGG + chr2.1:64778444-64778463 None:intergenic 20.0%
!! AATTATTTCAGAAGTTGAAA+TGG - chr2.1:64778628-64778647 MS.gene28283:CDS 20.0%
!! ATCAATTAATGAAGTTAATG+TGG + chr2.1:64778581-64778600 None:intergenic 20.0%
!! ATTATTTCAGAAGTTGAAAT+GGG - chr2.1:64778629-64778648 MS.gene28283:CDS 20.0%
!! TATGTATCTATATAAGTCAA+TGG + chr2.1:64778692-64778711 None:intergenic 20.0%
!! TTATGAACAATTATATGCAA+AGG - chr2.1:64778166-64778185 MS.gene28283:intron 20.0%
!! TTCATTGAGAAAAATTCAAT+GGG - chr2.1:64779096-64779115 MS.gene28283:CDS 20.0%
!! TTTATGAAAAAGAAATCATC+TGG - chr2.1:64777659-64777678 MS.gene28283:intron 20.0%
!! TTTCATTGAGAAAAATTCAA+TGG - chr2.1:64779095-64779114 MS.gene28283:CDS 20.0%
!! TTTCTCTATATTATCTAATG+AGG + chr2.1:64778917-64778936 None:intergenic 20.0%
!!! ATTTTTCTCAATGAAATCAT+TGG + chr2.1:64779091-64779110 None:intergenic 20.0%
!!! TAAACTTTTGAATGAAGTTT+AGG + chr2.1:64777137-64777156 None:intergenic 20.0%
!!! TTTCTAAAAAAACAAGCAAA+TGG + chr2.1:64778491-64778510 None:intergenic 20.0%
! AACATTAGCACATCTATATT+TGG - chr2.1:64779147-64779166 MS.gene28283:CDS 25.0%
! AATATAGATGTGCTAATGTT+TGG + chr2.1:64779147-64779166 None:intergenic 25.0%
! ACAATTATATGCAAAGGATA+TGG - chr2.1:64778172-64778191 MS.gene28283:intron 25.0%
! ATGTGATAAACGTGATAAAT+TGG - chr2.1:64778353-64778372 MS.gene28283:intron 25.0%
! GAAACTTTATACACTATTGA+TGG - chr2.1:64778605-64778624 MS.gene28283:CDS 25.0%
! TAAATACCTAATACATCCAT+AGG + chr2.1:64778262-64778281 None:intergenic 25.0%
! TGCTAAGATAACTAAAGAAT+CGG - chr2.1:64777724-64777743 MS.gene28283:intron 25.0%
! TGGATGTATTAGGTATTTAT+AGG - chr2.1:64778263-64778282 MS.gene28283:intron 25.0%
!! GATTGTGATACTTTTATTGA+GGG - chr2.1:64779000-64779019 MS.gene28283:CDS 25.0%
!! TTTTTATGAATTGAATGCCT+AGG + chr2.1:64778668-64778687 None:intergenic 25.0%
ACCATTATTAGCATCAGATA+GGG + chr2.1:64777420-64777439 None:intergenic 30.0%
AGTATTATCCTACGATTGAA+GGG - chr2.1:64777795-64777814 MS.gene28283:intron 30.0%
ATATTATAGGTTAACTGGGA+TGG - chr2.1:64778772-64778791 MS.gene28283:CDS 30.0%
ATCCAACAATGTTTGATTCA+AGG + chr2.1:64778983-64779002 None:intergenic 30.0%
ATCCTTGAATCAAACATTGT+TGG - chr2.1:64778978-64778997 MS.gene28283:CDS 30.0%
ATGAAGATTAACTGGAATTG+TGG - chr2.1:64777860-64777879 MS.gene28283:intron 30.0%
ATGATGATTCTTCAAAGAGA+TGG - chr2.1:64777909-64777928 MS.gene28283:intron 30.0%
GATAACTAAAGAATCGGTTA+CGG - chr2.1:64777730-64777749 MS.gene28283:intron 30.0%
GTACTATTGAAGATGCTTAA+AGG + chr2.1:64778520-64778539 None:intergenic 30.0%
TGTGGTATGACTCATAAAAA+AGG + chr2.1:64778563-64778582 None:intergenic 30.0%
TTCAAAATGCTATGGTTAAG+AGG + chr2.1:64779183-64779202 None:intergenic 30.0%
TTCCAACTCTTTCAATGATA+GGG - chr2.1:64779065-64779084 MS.gene28283:CDS 30.0%
TTGAGAAAAATTCAATGGGA+AGG - chr2.1:64779100-64779119 MS.gene28283:CDS 30.0%
TTTCAATCCTTGCATTGTAT+CGG - chr2.1:64777241-64777260 MS.gene28283:CDS 30.0%
! AAAGAGATGGTCAGTTTTTA+AGG - chr2.1:64777922-64777941 MS.gene28283:intron 30.0%
! AAGAGATGGTCAGTTTTTAA+GGG - chr2.1:64777923-64777942 MS.gene28283:intron 30.0%
! AATCTATGCTCAAGTGATTT+TGG - chr2.1:64778208-64778227 MS.gene28283:intron 30.0%
! ATCTATGCTCAAGTGATTTT+GGG - chr2.1:64778209-64778228 MS.gene28283:intron 30.0%
! GGATTGTGATACTTTTATTG+AGG - chr2.1:64778999-64779018 MS.gene28283:CDS 30.0%
! TTAGTAGCTTTGCAATCTAT+AGG - chr2.1:64778115-64778134 MS.gene28283:intron 30.0%
AAAGTTTACTATTTCCCGCA+AGG - chr2.1:64777149-64777168 MS.gene28283:CDS 35.0%
AAATTAGTTCAACCTCCCAA+GGG + chr2.1:64778828-64778847 None:intergenic 35.0%
AACCACGCATCATCAAATTA+TGG + chr2.1:64778088-64778107 None:intergenic 35.0%
ACAAAGACTTCATCAGTATG+AGG + chr2.1:64777287-64777306 None:intergenic 35.0%
ACCCTATCTGATGCTAATAA+TGG - chr2.1:64777416-64777435 MS.gene28283:CDS 35.0%
AGGATGCAATGAAGATTAAC+TGG - chr2.1:64777852-64777871 MS.gene28283:intron 35.0%
CAAGCAAATGGATAGAAGTA+TGG + chr2.1:64778479-64778498 None:intergenic 35.0%
CACCATTATTAGCATCAGAT+AGG + chr2.1:64777421-64777440 None:intergenic 35.0%
CCAAATAGCATAAATGAACC+AGG + chr2.1:64779261-64779280 None:intergenic 35.0%
CCTGGTTCATTTATGCTATT+TGG - chr2.1:64779258-64779277 MS.gene28283:CDS 35.0%
CTATCTGATGCTAATAATGG+TGG - chr2.1:64777419-64777438 MS.gene28283:CDS 35.0%
CTATTGAAGATGCTTAAAGG+AGG + chr2.1:64778517-64778536 None:intergenic 35.0%
CTGGAAATCTATCATTGGAA+TGG + chr2.1:64778944-64778963 None:intergenic 35.0%
CTTCCAACTCTTTCAATGAT+AGG - chr2.1:64779064-64779083 MS.gene28283:CDS 35.0%
GAAAAATTCAATGGGAAGGT+TGG - chr2.1:64779104-64779123 MS.gene28283:CDS 35.0%
GAAACAATTTCATCACCTGT+AGG + chr2.1:64777380-64777399 None:intergenic 35.0%
GAATGCTGGAAATCTATCAT+TGG + chr2.1:64778949-64778968 None:intergenic 35.0%
GAGAAGTTGAATGAATGTTG+TGG - chr2.1:64778404-64778423 MS.gene28283:intron 35.0%
GAGTATTATCCTACGATTGA+AGG - chr2.1:64777794-64777813 MS.gene28283:intron 35.0%
GATACAATGCAAGGATTGAA+AGG + chr2.1:64777242-64777261 None:intergenic 35.0%
TCATCTGGAGATATGTTTGT+TGG - chr2.1:64777674-64777693 MS.gene28283:intron 35.0%
TCATGCAAATTACTTCCAAC+AGG + chr2.1:64779297-64779316 None:intergenic 35.0%
TGAACCAGGATTAACTTCTT+TGG + chr2.1:64779247-64779266 None:intergenic 35.0%
TGTGGAAAAAAGACTGTCTT+GGG + chr2.1:64779037-64779056 None:intergenic 35.0%
TTTGGATTATGTGAGACTTC+AGG + chr2.1:64778799-64778818 None:intergenic 35.0%
! ATATGTTTGTTGGAATCCGT+CGG - chr2.1:64777684-64777703 MS.gene28283:intron 35.0%
!! TGAAGGGTTTTGTGATTTTG+TGG - chr2.1:64777811-64777830 MS.gene28283:intron 35.0%
!! TTCCATAATTTGATGATGCG+TGG - chr2.1:64778083-64778102 MS.gene28283:intron 35.0%
AAAAAGGCTTAGAGTTGCTC+AGG - chr2.1:64778885-64778904 MS.gene28283:CDS 40.0%
AAAAGGCTTAGAGTTGCTCA+GGG - chr2.1:64778886-64778905 MS.gene28283:CDS 40.0%
AACTAAAGAATCGGTTACGG+CGG - chr2.1:64777733-64777752 MS.gene28283:intron 40.0%
AAGGGAGAAGATGGTTGTAT+GGG - chr2.1:64779327-64779346 MS.gene28283:CDS 40.0%
ACCGTCAAACTTTGTCTCAA+AGG + chr2.1:64779208-64779227 None:intergenic 40.0%
AGCACCAAAGAAGTTAATCC+TGG - chr2.1:64779240-64779259 MS.gene28283:CDS 40.0%
ATAATCCAAAGCAAAGCCCT+TGG - chr2.1:64778809-64778828 MS.gene28283:CDS 40.0%
CAAAGGGGTTCAAAATGCTA+TGG + chr2.1:64779191-64779210 None:intergenic 40.0%
CACGAACTTACTCCAATTAG+TGG + chr2.1:64777603-64777622 None:intergenic 40.0%
CACTAATTGGAGTAAGTTCG+TGG - chr2.1:64777601-64777620 MS.gene28283:intron 40.0%
CCGTCAAACTTTGTCTCAAA+GGG + chr2.1:64779207-64779226 None:intergenic 40.0%
CGTCAAACTTTGTCTCAAAG+GGG + chr2.1:64779206-64779225 None:intergenic 40.0%
CTGTGGAAAAAAGACTGTCT+TGG + chr2.1:64779038-64779057 None:intergenic 40.0%
GAAATTAGTTCAACCTCCCA+AGG + chr2.1:64778829-64778848 None:intergenic 40.0%
GACTTCATCAGTATGAGGAT+CGG + chr2.1:64777282-64777301 None:intergenic 40.0%
GCTTCTCCTATGGATGTATT+AGG - chr2.1:64778253-64778272 MS.gene28283:intron 40.0%
GGTAAGATGATACATCCTGT+TGG - chr2.1:64779279-64779298 MS.gene28283:CDS 40.0%
GGTGATGAAATTGTTTCCTC+TGG - chr2.1:64777383-64777402 MS.gene28283:CDS 40.0%
GTAACAGACAGTTCTTGAGA+TGG + chr2.1:64777512-64777531 None:intergenic 40.0%
GTGTAGAACCAAAGATTTGG+CGG - chr2.1:64777084-64777103 MS.gene28283:CDS 40.0%
TAATCCAAAGCAAAGCCCTT+GGG - chr2.1:64778810-64778829 MS.gene28283:CDS 40.0%
TACAATTGCCCTCAGCAAAA+AGG - chr2.1:64778869-64778888 MS.gene28283:CDS 40.0%
TACTCCAATTAGTGGTGATC+AGG + chr2.1:64777595-64777614 None:intergenic 40.0%
TCACAAAACCCTTCAATCGT+AGG + chr2.1:64777806-64777825 None:intergenic 40.0%
TGAACACAACCATCAGTGAT+GGG + chr2.1:64777326-64777345 None:intergenic 40.0%
TTGCATGATTCTGCTACCAA+GGG - chr2.1:64779309-64779328 MS.gene28283:CDS 40.0%
TTTGCATGATTCTGCTACCA+AGG - chr2.1:64779308-64779327 MS.gene28283:CDS 40.0%
! AACTCTAAGCCTTTTTGCTG+AGG + chr2.1:64778881-64778900 None:intergenic 40.0%
! ACTCTAAGCCTTTTTGCTGA+GGG + chr2.1:64778880-64778899 None:intergenic 40.0%
! TAGGGTTAGAGTTTTTCCAG+AGG + chr2.1:64777402-64777421 None:intergenic 40.0%
! TGTTTAGTTTCGAGGTCAAG+CGG + chr2.1:64777488-64777507 None:intergenic 40.0%
!! AGGAATTTTGACAGAGTGTC+CGG + chr2.1:64777117-64777136 None:intergenic 40.0%
!! AGGGTTTTGTGATTTTGTGG+TGG - chr2.1:64777814-64777833 MS.gene28283:intron 40.0%
!! CCCTTTGAGACAAAGTTTGA+CGG - chr2.1:64779204-64779223 MS.gene28283:CDS 40.0%
!! GCCAAATCTTTGGTTCTACA+CGG + chr2.1:64777085-64777104 None:intergenic 40.0%
!!! AGGATTTTGCTGTTGAATGC+TGG + chr2.1:64778963-64778982 None:intergenic 40.0%
!!! CAAGACAGTCTTTTTTCCAC+AGG - chr2.1:64779036-64779055 MS.gene28283:CDS 40.0%
AAGGGATAGGGTTTCAGTGT+TGG + chr2.1:64777204-64777223 None:intergenic 45.0%
AGAGTTGGAAGTAGTTCCTG+TGG + chr2.1:64779055-64779074 None:intergenic 45.0%
AGGGATAGGGTTTCAGTGTT+GGG + chr2.1:64777203-64777222 None:intergenic 45.0%
ATCCGTCGGCATACTAAGTT+TGG - chr2.1:64777698-64777717 MS.gene28283:intron 45.0%
CAACGAAGATGCTTCTCCTA+TGG - chr2.1:64778243-64778262 MS.gene28283:intron 45.0%
CAAGGGAGAAGATGGTTGTA+TGG - chr2.1:64779326-64779345 MS.gene28283:CDS 45.0%
CACCAAACTTAGTATGCCGA+CGG + chr2.1:64777703-64777722 None:intergenic 45.0%
CATACAACCATCTTCTCCCT+TGG + chr2.1:64779328-64779347 None:intergenic 45.0%
CATTGCATCCTCAACAACCT+TGG + chr2.1:64777843-64777862 None:intergenic 45.0%
GAAACCCTATCCCTTCTTGA+TGG - chr2.1:64777209-64777228 MS.gene28283:CDS 45.0%
GAATGCCTAGGACAACTTCT+TGG + chr2.1:64778656-64778675 None:intergenic 45.0%
GACACCTGATCACCACTAAT+TGG - chr2.1:64777588-64777607 MS.gene28283:CDS 45.0%
GACGAAAAGAAACTCGTCTG+CGG - chr2.1:64777623-64777642 MS.gene28283:intron 45.0%
GCCGTGTAGAACCAAAGATT+TGG - chr2.1:64777081-64777100 MS.gene28283:CDS 45.0%
GGCAATTGTAGATTCAGTGC+AGG + chr2.1:64778859-64778878 None:intergenic 45.0%
GGCCCTATCATTGAAAGAGT+TGG + chr2.1:64779070-64779089 None:intergenic 45.0%
GTGAACACAACCATCAGTGA+TGG + chr2.1:64777327-64777346 None:intergenic 45.0%
GTGACCATCAAGAAGGGATA+GGG + chr2.1:64777216-64777235 None:intergenic 45.0%
! AACCATCAGTGATGGGAGTT+AGG + chr2.1:64777319-64777338 None:intergenic 45.0%
! CATGTTCTAAGTGACCTTGC+GGG + chr2.1:64777166-64777185 None:intergenic 45.0%
! CTATCCCTTCTTGATGGTCA+CGG - chr2.1:64777215-64777234 MS.gene28283:CDS 45.0%
! GAGATGGCTGTTTAGTTTCG+AGG + chr2.1:64777496-64777515 None:intergenic 45.0%
! GCATGTTCTAAGTGACCTTG+CGG + chr2.1:64777167-64777186 None:intergenic 45.0%
! GGAGACATGGCGGAAATATT+TGG + chr2.1:64777050-64777069 None:intergenic 45.0%
! TTTCAGTGTTGGGGGGATTA+GGG + chr2.1:64777193-64777212 None:intergenic 45.0%
!! AATCTTTGGTTCTACACGGC+TGG + chr2.1:64777081-64777100 None:intergenic 45.0%
!! ATCTTTGGTTCTACACGGCT+GGG + chr2.1:64777080-64777099 None:intergenic 45.0%
!! CATAGGAGAAGCATCTTCGT+TGG + chr2.1:64778245-64778264 None:intergenic 45.0%
!! TTCTTTGGTGCTGCACTTGT+GGG + chr2.1:64779232-64779251 None:intergenic 45.0%
!!! TGATTTTGTGGTGGATGCCA+AGG - chr2.1:64777823-64777842 MS.gene28283:intron 45.0%
AAGGACCGTGACCATCAAGA+AGG + chr2.1:64777223-64777242 None:intergenic 50.0%
AGGACCGTGACCATCAAGAA+GGG + chr2.1:64777222-64777241 None:intergenic 50.0%
AGGATCGGCGAGGTAATCAA+CGG + chr2.1:64777267-64777286 None:intergenic 50.0%
AGTGGTGATCAGGTGTCTCA+AGG + chr2.1:64777585-64777604 None:intergenic 50.0%
ATTGATGTCGCGCAAGAACG+AGG + chr2.1:64777458-64777477 None:intergenic 50.0%
CCAGACTTTGCCATGAACGT+CGG + chr2.1:64777534-64777553 None:intergenic 50.0%
CGACGTTCATGGCAAAGTCT+GGG - chr2.1:64777532-64777551 MS.gene28283:CDS 50.0%
CGTGACCATCAAGAAGGGAT+AGG + chr2.1:64777217-64777236 None:intergenic 50.0%
CTCCTAACTCCCATCACTGA+TGG - chr2.1:64777314-64777333 MS.gene28283:CDS 50.0%
CTGTCTGTTACCGACGTTCA+TGG - chr2.1:64777521-64777540 MS.gene28283:CDS 50.0%
GGGATAGGGTTTCAGTGTTG+GGG + chr2.1:64777202-64777221 None:intergenic 50.0%
GTGGTGATCAGGTGTCTCAA+GGG + chr2.1:64777584-64777603 None:intergenic 50.0%
GTTCGTGAAGAGGAACCTAC+AGG - chr2.1:64777362-64777381 MS.gene28283:CDS 50.0%
TAGTTTCGAGGTCAAGCGGT+GGG + chr2.1:64777484-64777503 None:intergenic 50.0%
TATACCTCAAGCATGCGCCA+TGG + chr2.1:64777980-64777999 None:intergenic 50.0%
TCAACGGCCGATACAATGCA+AGG + chr2.1:64777251-64777270 None:intergenic 50.0%
TCCTACTGAGGTTCGTGAAG+AGG - chr2.1:64777352-64777371 MS.gene28283:CDS 50.0%
TCCTCTTCACGAACCTCAGT+AGG + chr2.1:64777356-64777375 None:intergenic 50.0%
TCTCTGCTCCTAATCGTCCA+TGG - chr2.1:64777960-64777979 MS.gene28283:intron 50.0%
TCTGCTACCAAGGGAGAAGA+TGG - chr2.1:64779318-64779337 MS.gene28283:CDS 50.0%
TCTTCACGAACCTCAGTAGG+AGG + chr2.1:64777353-64777372 None:intergenic 50.0%
TGGGTCCAAGAAGTTGTCCT+AGG - chr2.1:64778648-64778667 MS.gene28283:CDS 50.0%
TGTTCACGAACCTCCTACTG+AGG - chr2.1:64777340-64777359 MS.gene28283:CDS 50.0%
TTAGTTTCGAGGTCAAGCGG+TGG + chr2.1:64777485-64777504 None:intergenic 50.0%
! GATAGGGTTTCAGTGTTGGG+GGG + chr2.1:64777200-64777219 None:intergenic 50.0%
! GGATAGGGTTTCAGTGTTGG+GGG + chr2.1:64777201-64777220 None:intergenic 50.0%
! GTTTCAGTGTTGGGGGGATT+AGG + chr2.1:64777194-64777213 None:intergenic 50.0%
!! CTTCTTTGGTGCTGCACTTG+TGG + chr2.1:64779233-64779252 None:intergenic 50.0%
!! TCTTTGGTGCTGCACTTGTG+GGG + chr2.1:64779231-64779250 None:intergenic 50.0%
ACCTCCCAAGGGCTTTGCTT+TGG + chr2.1:64778817-64778836 None:intergenic 55.0%
AGCATGCGCCATGGACGATT+AGG + chr2.1:64777971-64777990 None:intergenic 55.0%
AGGGAGTTCCACGGTAGACA+TGG + chr2.1:64777565-64777584 None:intergenic 55.0%
CATCAGTATGAGGATCGGCG+AGG + chr2.1:64777277-64777296 None:intergenic 55.0%
CCGACGTTCATGGCAAAGTC+TGG - chr2.1:64777531-64777550 MS.gene28283:CDS 55.0%
GAGTTTCGCCATGTCTACCG+TGG - chr2.1:64777554-64777573 MS.gene28283:CDS 55.0%
GCACAGCACCGCCAAATCTT+TGG + chr2.1:64777095-64777114 None:intergenic 55.0%
GGTGGATGCCAAGGTTGTTG+AGG - chr2.1:64777832-64777851 MS.gene28283:intron 55.0%
GGTGTCTCAAGGGAGTTCCA+CGG + chr2.1:64777574-64777593 None:intergenic 55.0%
TCCAAAGCAAAGCCCTTGGG+AGG - chr2.1:64778813-64778832 MS.gene28283:CDS 55.0%
TGTCGCGCAAGAACGAGGTA+CGG + chr2.1:64777453-64777472 None:intergenic 55.0%
!! AAGATTTGGCGGTGCTGTGC+CGG - chr2.1:64777095-64777114 MS.gene28283:CDS 55.0%
AGAATCGGTTACGGCGGCAG+CGG - chr2.1:64777739-64777758 MS.gene28283:intron 60.0%
GGTTCTACACGGCTGGGTTG+TGG + chr2.1:64777074-64777093 None:intergenic 60.0%
TCGTCCATGGCGCATGCTTG+AGG - chr2.1:64777973-64777992 MS.gene28283:intron 60.0%
TCTACACGGCTGGGTTGTGG+TGG + chr2.1:64777071-64777090 None:intergenic 60.0%
! GCTGGGTTGTGGTGGAGACA+TGG + chr2.1:64777063-64777082 None:intergenic 60.0%
! GGGTTGTGGTGGAGACATGG+CGG + chr2.1:64777060-64777079 None:intergenic 60.0%
GGTTACGGCGGCAGCGGAGT+TGG - chr2.1:64777745-64777764 MS.gene28283:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 64777038 64779362 64777038 ID=MS.gene28283
chr2.1 mRNA 64777038 64779362 64777038 ID=MS.gene28283.t1;Parent=MS.gene28283
chr2.1 exon 64778406 64779362 64778406 ID=MS.gene28283.t1.exon1;Parent=MS.gene28283.t1
chr2.1 CDS 64778406 64779362 64778406 ID=cds.MS.gene28283.t1;Parent=MS.gene28283.t1
chr2.1 exon 64777038 64777619 64777038 ID=MS.gene28283.t1.exon2;Parent=MS.gene28283.t1
chr2.1 CDS 64777038 64777619 64777038 ID=cds.MS.gene28283.t1;Parent=MS.gene28283.t1
Gene Sequence

>MS.gene28283

ATGGTAGAACCAAATATTTCCGCCATGTCTCCACCACAACCCAGCCGTGTAGAACCAAAGATTTGGCGGTGCTGTGCCGGACACTCTGTCAAAATTCCTAAACTTCATTCAAAAGTTTACTATTTCCCGCAAGGTCACTTAGAACATGCTTGCCCTAATCCCCCCAACACTGAAACCCTATCCCTTCTTGATGGTCACGGTCCTTTCAATCCTTGCATTGTATCGGCCGTTGATTACCTCGCCGATCCTCATACTGATGAAGTCTTTGTCAAACTTCTCCTAACTCCCATCACTGATGGTTGTGTTCACGAACCTCCTACTGAGGTTCGTGAAGAGGAACCTACAGGTGATGAAATTGTTTCCTCTGGAAAAACTCTAACCCTATCTGATGCTAATAATGGTGGTGCATTCTCCGTACCTCGTTCTTGCGCGACATCAATCTTCCCACCGCTTGACCTCGAAACTAAACAGCCATCTCAAGAACTGTCTGTTACCGACGTTCATGGCAAAGTCTGGGAGTTTCGCCATGTCTACCGTGGAACTCCCTTGAGACACCTGATCACCACTAATTGGAGTAAGTTCGTGGACGAAAAGAAACTCGTCTGCGGCGATTCTGTAATTTTTATGAAAAAGAAATCATCTGGAGATATGTTTGTTGGAATCCGTCGGCATACTAAGTTTGGTGCTGCTAAGATAACTAAAGAATCGGTTACGGCGGCAGCGGAGTTGGCAGATAAGAATATCGCTTTTGAAGTTGAGTATTATCCTACGATTGAAGGGTTTTGTGATTTTGTGGTGGATGCCAAGGTTGTTGAGGATGCAATGAAGATTAACTGGAATTGTGGAATGAGAATTAAATTTTCTTTGAAGAATGATGATTCTTCAAAGAGATGGTCAGTTTTTAAGGGTACAATATCTGCTCTCTCTGCTCCTAATCGTCCATGGCGCATGCTTGAGGTATATTTATATTGATCATCTTTTGTATTATATGCAACATTTTTGTTTCATTAATGTTATTACAATTGAATTTGATATAAACGTGATTTTCCATAATTTGATGATGCGTGGTTCATGAAATTAGTAGCTTTGCAATCTATAGGATAAGTTACTATGTGATTCTTTGTGAAATTATGAACAATTATATGCAAAGGATATGGAGTGTATATAGAAAATCTATGCTCAAGTGATTTTGGGCATTTAATAACCAACGAAGATGCTTCTCCTATGGATGTATTAGGTATTTATAGGAAAATGTTTTTTAGACACGCATAAACTCATTAAACAATTTGAGAGAGAAAGAAATAAAAAGAGTTATATGTGATAAACGTGATAAATTGGTAATGTGATAAGAATAGAGAGATAAAATGAGAAGTTGAATGAATGTTGTGGAATTAAGTCGTTGTCCCAATATATCGTTGTTGTTTTTTATTTTATATTACCATACTTCTATCCATTTGCTTGTTTTTTTAGAAACATCCTCCTTTAAGCATCTTCAATAGTACAATTAAATTAGAGTTGCTTTCCTTTTTTATGAGTCATACCACATTAACTTCATTAATTGATTTTAGAAACTTTATACACTATTGATGGAATTATTTCAGAAGTTGAAATGGGTCCAAGAAGTTGTCCTAGGCATTCAATTCATAAAAAACCATTGACTTATATAGATACATACTATATTTCATATCATATAAATGATTAATGTTGGATTCTCACAATTTTTCATCTCAATATATATTATAGGTTAACTGGGATGGACCTGAAGTCTCACATAATCCAAAGCAAAGCCCTTGGGAGGTTGAACTAATTTCTTATATACCTGCACTGAATCTACAATTGCCCTCAGCAAAAAGGCTTAGAGTTGCTCAGGGTTATACCTCATTAGATAATATAGAGAAATCTTCCATTCCAATGATAGATTTCCAGCATTCAACAGCAAAATCCTTGAATCAAACATTGTTGGATTGTGATACTTTTATTGAGGGCATGCAGAGAGCCCAAGACAGTCTTTTTTCCACAGGAACTACTTCCAACTCTTTCAATGATAGGGCCAATGATTTCATTGAGAAAAATTCAATGGGAAGGTTGGATATTGTGTCAACTGAGCCAAACATTAGCACATCTATATTTGGTGACTTGTCACCTCTTAACCATAGCATTTTGAACCCCTTTGAGACAAAGTTTGACGGTCCCCACAAGTGCAGCACCAAAGAAGTTAATCCTGGTTCATTTATGCTATTTGGTAAGATGATACATCCTGTTGGAAGTAATTTGCATGATTCTGCTACCAAGGGAGAAGATGGTTGTATGGGCTGCAATAATTGA
Protein sequence

>MS.gene28283.t1

MVEPNISAMSPPQPSRVEPKIWRCCAGHSVKIPKLHSKVYYFPQGHLEHACPNPPNTETLSLLDGHGPFNPCIVSAVDYLADPHTDEVFVKLLLTPITDGCVHEPPTEVREEEPTGDEIVSSGKTLTLSDANNGGAFSVPRSCATSIFPPLDLETKQPSQELSVTDVHGKVWEFRHVYRGTPLRHLITTNWSKFVDEKKLVCGDSVIFMKKKSSGDMFVGIRRHTKFGAAKITKESVTAAAELADKNIAFEVEYYPTIEGFCDFVVDAKVVEDAMKINWNCGMRIKFSLKNDDSSKRWSVFKGTISALSAPNRPWRMLEVNWDGPEVSHNPKQSPWEVELISYIPALNLQLPSAKRLRVAQGYTSLDNIEKSSIPMIDFQHSTAKSLNQTLLDCDTFIEGMQRAQDSLFSTGTTSNSFNDRANDFIEKNSMGRLDIVSTEPNISTSIFGDLSPLNHSILNPFETKFDGPHKCSTKEVNPGSFMLFGKMIHPVGSNLHDSATKGEDGCMGCNN