Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28365.t1 | GAU33477.1 | 50.1 | 579 | 191 | 11 | 121 | 682 | 68 | 565 | 9.80E-136 | 494.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28365.t1 | Q9SZL8 | 33.5 | 185 | 114 | 6 | 105 | 283 | 77 | 258 | 2.5e-15 | 85.5 |
| MS.gene28365.t1 | Q9SZL8 | 33.6 | 110 | 71 | 1 | 283 | 392 | 531 | 638 | 5.5e-10 | 67.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28365.t1 | A0A2Z6NTS8 | 50.1 | 579 | 191 | 11 | 121 | 682 | 68 | 565 | 7.1e-136 | 494.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28365.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28365.t1 | MTR_3g080590 | 85.806 | 155 | 18 | 1 | 1 | 151 | 1 | 155 | 1.26e-78 | 248 |
| MS.gene28365.t1 | MTR_7g446520 | 43.915 | 189 | 91 | 1 | 94 | 282 | 81 | 254 | 1.04e-44 | 163 |
| MS.gene28365.t1 | MTR_7g446480 | 51.852 | 108 | 52 | 0 | 175 | 282 | 140 | 247 | 7.99e-31 | 123 |
| MS.gene28365.t1 | MTR_7g028855 | 44.737 | 152 | 79 | 2 | 94 | 241 | 113 | 263 | 1.06e-30 | 126 |
| MS.gene28365.t1 | MTR_7g446510 | 50.926 | 108 | 53 | 0 | 175 | 282 | 155 | 262 | 4.89e-28 | 115 |
| MS.gene28365.t1 | MTR_1g070355 | 31.461 | 178 | 115 | 2 | 101 | 273 | 74 | 249 | 3.65e-21 | 98.2 |
| MS.gene28365.t1 | MTR_5g076070 | 29.518 | 166 | 114 | 2 | 98 | 260 | 50 | 215 | 6.44e-21 | 94.0 |
| MS.gene28365.t1 | MTR_6g022080 | 26.471 | 170 | 122 | 1 | 94 | 260 | 78 | 247 | 5.84e-18 | 84.3 |
| MS.gene28365.t1 | MTR_8g035530 | 46.753 | 77 | 39 | 1 | 88 | 164 | 1 | 75 | 1.51e-16 | 75.1 |
| MS.gene28365.t1 | MTR_0402s0040 | 30.682 | 176 | 113 | 6 | 104 | 274 | 29 | 200 | 2.78e-14 | 76.3 |
| MS.gene28365.t1 | MTR_3g450850 | 29.651 | 172 | 109 | 4 | 107 | 266 | 53 | 224 | 1.08e-13 | 73.6 |
| MS.gene28365.t1 | MTR_4g035820 | 27.419 | 248 | 157 | 9 | 107 | 337 | 81 | 322 | 2.23e-13 | 73.9 |
| MS.gene28365.t1 | MTR_6g051425 | 28.495 | 186 | 118 | 6 | 108 | 283 | 24 | 204 | 5.04e-12 | 68.2 |
| MS.gene28365.t1 | MTR_1g008290 | 29.861 | 144 | 89 | 4 | 150 | 288 | 4 | 140 | 1.06e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28365.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 3.71e-19 | 92.4 |
| MS.gene28365.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 3.82e-19 | 92.4 |
| MS.gene28365.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 3.82e-19 | 92.4 |
| MS.gene28365.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 3.92e-19 | 92.4 |
| MS.gene28365.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 3.98e-19 | 92.4 |
| MS.gene28365.t1 | AT4G38180 | 31.343 | 268 | 164 | 10 | 23 | 283 | 4 | 258 | 1.42e-15 | 81.3 |
| MS.gene28365.t1 | AT4G38180 | 33.636 | 110 | 71 | 1 | 283 | 392 | 531 | 638 | 3.44e-12 | 70.5 |
Find 132 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGTTGATTGTGATATT+TGG | 0.171428 | 4.4:+9456491 | None:intergenic |
| AAAATTGATCCACCATTATT+TGG | 0.177287 | 4.4:+9456254 | None:intergenic |
| CTCTTGCAAATCAGACTTTC+AGG | 0.192125 | 4.4:+9457281 | None:intergenic |
| ATCACTTGCAACAAATTTAC+TGG | 0.221550 | 4.4:+9457028 | None:intergenic |
| CCCATAGTTTCTCAATGTTT+TGG | 0.242135 | 4.4:+9455997 | None:intergenic |
| TCACTCAATTTGCGGTAATT+AGG | 0.258248 | 4.4:+9458580 | None:intergenic |
| AAATGATGATATAAGGGATA+TGG | 0.309095 | 4.4:-9458917 | MS.gene28365:CDS |
| TAACACCATACCCAACATTA+TGG | 0.313783 | 4.4:+9456303 | None:intergenic |
| AGGACTTGGGTTTATCAAAA+AGG | 0.326599 | 4.4:-9458464 | MS.gene28365:CDS |
| TGATAAACCCAAGTCCTTCA+TGG | 0.346028 | 4.4:+9458470 | None:intergenic |
| ATGTGACAAATGATGATATA+AGG | 0.351919 | 4.4:-9458924 | MS.gene28365:CDS |
| ACGACTTTGTTCGTACGATT+TGG | 0.356788 | 4.4:-9458669 | MS.gene28365:CDS |
| ACACCAATTCCAGCAAGTTC+TGG | 0.360337 | 4.4:+9456873 | None:intergenic |
| CACTACGGGGTGCCAAATAA+TGG | 0.366974 | 4.4:-9456266 | MS.gene28365:CDS |
| AAAGGACTTATATAATTTCA+TGG | 0.370840 | 4.4:-9458446 | MS.gene28365:CDS |
| TAAGAGCGCAAGTGATTATA+AGG | 0.371814 | 4.4:-9457129 | MS.gene28365:CDS |
| TGTAAGAACATGTCATATCT+TGG | 0.387474 | 4.4:-9458518 | MS.gene28365:CDS |
| ATATAATTTCATGGATCATC+AGG | 0.392252 | 4.4:-9458437 | MS.gene28365:CDS |
| ATCCATGTTGTCATACTTCA+TGG | 0.394339 | 4.4:+9457310 | None:intergenic |
| ATCATTCGCAACAAATTTGT+TGG | 0.403036 | 4.4:+9457001 | None:intergenic |
| TAAATTTGTTGCAAGTGATA+AGG | 0.405681 | 4.4:-9457024 | MS.gene28365:CDS |
| TCTAACACTGCTCTGCATAC+TGG | 0.407068 | 4.4:-9456194 | MS.gene28365:CDS |
| GATTATAAGGAGGCTCTAGA+AGG | 0.413898 | 4.4:-9457116 | MS.gene28365:CDS |
| GATTCATTATCAGACTCAAT+AGG | 0.414121 | 4.4:+9456818 | None:intergenic |
| GCACTGGTATTACACGTAAG+AGG | 0.418801 | 4.4:-9456610 | MS.gene28365:CDS |
| AACAAATACAAGCACTAGAA+AGG | 0.422563 | 4.4:-9456531 | MS.gene28365:CDS |
| TGTCCAGAACTTGCTGGAAT+TGG | 0.422787 | 4.4:-9456876 | MS.gene28365:CDS |
| TGCGGTAATTAGGCATCAAA+TGG | 0.435720 | 4.4:+9458590 | None:intergenic |
| AAAGTTTAAAGATGTCAAAA+AGG | 0.436388 | 4.4:-9457531 | MS.gene28365:CDS |
| CGCAGAACAATTAGTTCGAA+TGG | 0.445789 | 4.4:+9458708 | None:intergenic |
| TATCAACTTCACTCAATTTG+CGG | 0.446828 | 4.4:+9458572 | None:intergenic |
| AAGGGTGGCCATGAAGGACT+TGG | 0.449428 | 4.4:-9458478 | MS.gene28365:CDS |
| GTAAGAACATGTCATATCTT+GGG | 0.464989 | 4.4:-9458517 | MS.gene28365:CDS |
| GCGTCAATTAGTATGCAATA+AGG | 0.467578 | 4.4:-9458782 | MS.gene28365:CDS |
| AACGCAAAGGAGCTAATTCA+TGG | 0.469712 | 4.4:+9458617 | None:intergenic |
| TTCGAATGGTTAGCGTAGAT+CGG | 0.471186 | 4.4:+9458722 | None:intergenic |
| GAAATCCAGGGCACACGATA+CGG | 0.472290 | 4.4:-9456902 | MS.gene28365:intron |
| AATAGCCGTCATGAGGGAAA+TGG | 0.477370 | 4.4:-9457068 | MS.gene28365:CDS |
| CAAGGGAAAGAGAACTTTGA+TGG | 0.478759 | 4.4:-9458964 | MS.gene28365:CDS |
| CGGACGTGTCCAGAACTTGC+TGG | 0.483560 | 4.4:-9456882 | MS.gene28365:CDS |
| ATGTGAAACGTGATTCTAAT+GGG | 0.492055 | 4.4:-9458816 | MS.gene28365:CDS |
| CACTCTGTAGCAGTGTCAAA+TGG | 0.499398 | 4.4:-9456653 | MS.gene28365:CDS |
| AGTGTTAGAATGTGATGAGA+GGG | 0.502952 | 4.4:+9456208 | None:intergenic |
| AATGGTGTGACCCGTGACTT+TGG | 0.505092 | 4.4:-9456374 | MS.gene28365:CDS |
| GACACCGATAGTGATACATA+TGG | 0.508428 | 4.4:-9459126 | MS.gene28365:CDS |
| GCAAGGGTTAAAATACAAGA+TGG | 0.508614 | 4.4:-9458415 | MS.gene28365:CDS |
| GTATCACTATATACATCAAA+AGG | 0.509968 | 4.4:+9459183 | None:intergenic |
| GGTCAAAAGGGTGGCCATGA+AGG | 0.510809 | 4.4:-9458484 | MS.gene28365:CDS |
| CCACGGGTTTGAAGTAAGAA+AGG | 0.512169 | 4.4:-9458842 | MS.gene28365:CDS |
| TGTGATGAGAGGGTAGTTGT+CGG | 0.513549 | 4.4:+9456218 | None:intergenic |
| GATGTGAAACGTGATTCTAA+TGG | 0.514927 | 4.4:-9458817 | MS.gene28365:CDS |
| ATTTCGTCTGCAACTTGTCA+AGG | 0.521232 | 4.4:+9457393 | None:intergenic |
| AAATGGACATGACAAGGATA+AGG | 0.524930 | 4.4:-9457051 | MS.gene28365:CDS |
| ACACCGATAGTGATACATAT+GGG | 0.525577 | 4.4:-9459125 | MS.gene28365:CDS |
| CAAGGGTTAAAATACAAGAT+GGG | 0.527779 | 4.4:-9458414 | MS.gene28365:CDS |
| AACAACGATGTTCGTACTGA+TGG | 0.529175 | 4.4:-9459036 | MS.gene28365:CDS |
| AAAGTCTGATTTGCAAGAGA+TGG | 0.531904 | 4.4:-9457277 | MS.gene28365:CDS |
| AAGTGCCCCTCGACGAAACA+TGG | 0.534361 | 4.4:+9457187 | None:intergenic |
| ACAAATACAAGCACTAGAAA+GGG | 0.535750 | 4.4:-9456530 | MS.gene28365:CDS |
| GTAGTTGTCGGAGGGAATTG+TGG | 0.539742 | 4.4:+9456230 | None:intergenic |
| TGTGACAAATGATGATATAA+GGG | 0.541240 | 4.4:-9458923 | MS.gene28365:CDS |
| AAGACAGCCATTGTGCAAGT+TGG | 0.545484 | 4.4:-9456328 | MS.gene28365:CDS |
| AGCTAATTCATGGTTGTGAG+AGG | 0.545517 | 4.4:+9458627 | None:intergenic |
| ACTTCATGGCACAAATAATG+TGG | 0.547507 | 4.4:+9457324 | None:intergenic |
| TCGTCATTTGCCTCCCAAGA+AGG | 0.555407 | 4.4:-9457227 | MS.gene28365:CDS |
| CACTGGTATTACACGTAAGA+GGG | 0.559146 | 4.4:-9456609 | MS.gene28365:CDS |
| GGTGTCGTGTCTGAAGATCA+AGG | 0.560464 | 4.4:-9456855 | MS.gene28365:CDS |
| CAGTGTTAGAATGTGATGAG+AGG | 0.563750 | 4.4:+9456207 | None:intergenic |
| TTCATCATTACCTTCTTGGG+AGG | 0.565482 | 4.4:+9457217 | None:intergenic |
| CGAGAAGTTGAGAAAAGCAC+TGG | 0.569609 | 4.4:-9456626 | MS.gene28365:CDS |
| TATTATTTGCAAAATACCAC+GGG | 0.572281 | 4.4:-9458858 | MS.gene28365:CDS |
| CCTTTGACATTCACCATCAG+TGG | 0.574175 | 4.4:+9456978 | None:intergenic |
| GTGGAATTTAACCATGGTAA+TGG | 0.576772 | 4.4:-9459000 | MS.gene28365:CDS |
| GCACAAATAATGTGGGAACA+TGG | 0.578248 | 4.4:+9457332 | None:intergenic |
| CACCCCATATGTATCACTAT+CGG | 0.580906 | 4.4:+9459122 | None:intergenic |
| AAATGACCATGTTTCGTCGA+GGG | 0.581274 | 4.4:-9457193 | MS.gene28365:CDS |
| GTGTCGTGTCTGAAGATCAA+GGG | 0.581492 | 4.4:-9456854 | MS.gene28365:CDS |
| GCTAATTCATGGTTGTGAGA+GGG | 0.581523 | 4.4:+9458628 | None:intergenic |
| TCAATTAGTATGCAATAAGG+AGG | 0.584633 | 4.4:-9458779 | MS.gene28365:CDS |
| GTATTATTTGCAAAATACCA+CGG | 0.584890 | 4.4:-9458859 | MS.gene28365:CDS |
| AATGACCATGTTTCGTCGAG+GGG | 0.585541 | 4.4:-9457192 | MS.gene28365:CDS |
| GCAAGTTGGAACCATAATGT+TGG | 0.585606 | 4.4:-9456314 | MS.gene28365:CDS |
| TAAGATAAATAGCCGTCATG+AGG | 0.585792 | 4.4:-9457075 | MS.gene28365:CDS |
| AGGGTGGCCATGAAGGACTT+GGG | 0.586883 | 4.4:-9458477 | MS.gene28365:CDS |
| GAAGCTTCAAAGATATTCAC+CGG | 0.587720 | 4.4:-9457557 | MS.gene28365:intron |
| AAGATAAATAGCCGTCATGA+GGG | 0.587755 | 4.4:-9457074 | MS.gene28365:CDS |
| ATACTCACCGGTGTATAACT+CGG | 0.588936 | 4.4:+9456158 | None:intergenic |
| ATTTCATGGATCATCAGGCA+AGG | 0.590300 | 4.4:-9458432 | MS.gene28365:CDS |
| ATGAGAGGGTAGTTGTCGGA+GGG | 0.591320 | 4.4:+9456222 | None:intergenic |
| CATGTCCATTTCCCTCATGA+CGG | 0.591948 | 4.4:+9457063 | None:intergenic |
| TGGAACCATAATGTTGGGTA+TGG | 0.594448 | 4.4:-9456308 | MS.gene28365:CDS |
| CTTCATGGCACAAATAATGT+GGG | 0.594948 | 4.4:+9457325 | None:intergenic |
| TATGAGTGCGTTGAAGAATG+TGG | 0.597255 | 4.4:-9456055 | MS.gene28365:CDS |
| GAACGAGATGAAGATGAGGA+TGG | 0.598765 | 4.4:-9457476 | MS.gene28365:CDS |
| CAAGTTGGAACCATAATGTT+GGG | 0.599464 | 4.4:-9456313 | MS.gene28365:CDS |
| TTTCATGGATCATCAGGCAA+GGG | 0.599626 | 4.4:-9458431 | MS.gene28365:CDS |
| ATATAGTGATACAGATGAGG+TGG | 0.607738 | 4.4:-9459172 | MS.gene28365:CDS |
| AAGGGTTAAAATACAAGATG+GGG | 0.610552 | 4.4:-9458413 | MS.gene28365:CDS |
| AAACATCGCAGTGACTATTG+TGG | 0.611836 | 4.4:-9456021 | MS.gene28365:CDS |
| ATTATAAGGAGGCTCTAGAA+GGG | 0.613050 | 4.4:-9457115 | MS.gene28365:CDS |
| GCTACTTTGAGTTACTTCCA+AGG | 0.617165 | 4.4:-9458382 | MS.gene28365:intron |
| GTTGATAAACAAGTTGCTAG+TGG | 0.617676 | 4.4:-9458556 | MS.gene28365:CDS |
| CGATAGTGATACATATGGGG+TGG | 0.618374 | 4.4:-9459121 | MS.gene28365:CDS |
| GATGAGAGGGTAGTTGTCGG+AGG | 0.619255 | 4.4:+9456221 | None:intergenic |
| CATTGAACGAGATGAAGATG+AGG | 0.623154 | 4.4:-9457480 | MS.gene28365:CDS |
| TATGGTTCCAACTTGCACAA+TGG | 0.627946 | 4.4:+9456321 | None:intergenic |
| TACGGGGTGCCAAATAATGG+TGG | 0.637391 | 4.4:-9456263 | MS.gene28365:CDS |
| CCTTTCTTACTTCAAACCCG+TGG | 0.639832 | 4.4:+9458842 | None:intergenic |
| CATTGCAAACACCATTACCA+TGG | 0.642035 | 4.4:+9458989 | None:intergenic |
| AATGGTGTTTGCAATGAGCA+AGG | 0.648235 | 4.4:-9458982 | MS.gene28365:CDS |
| GCTAGTGGTCTACATTCGCA+AGG | 0.649023 | 4.4:-9458541 | MS.gene28365:CDS |
| ATCAAATGGACAAAACGCAA+AGG | 0.651947 | 4.4:+9458604 | None:intergenic |
| AAAATGACCATGTTTCGTCG+AGG | 0.652304 | 4.4:-9457194 | MS.gene28365:CDS |
| TGAGGGAAATGGACATGACA+AGG | 0.654599 | 4.4:-9457057 | MS.gene28365:CDS |
| TGTCGTGTCTGAAGATCAAG+GGG | 0.656613 | 4.4:-9456853 | MS.gene28365:CDS |
| ATGGTGTTTGCAATGAGCAA+GGG | 0.657603 | 4.4:-9458981 | MS.gene28365:CDS |
| TCTGTAGCAGTGTCAAATGG+TGG | 0.657609 | 4.4:-9456650 | MS.gene28365:CDS |
| TGATGGAGATGCAGACGGTG+TGG | 0.660310 | 4.4:-9459019 | MS.gene28365:CDS |
| TGCCATGAAGTATGACAACA+TGG | 0.671427 | 4.4:-9457312 | MS.gene28365:CDS |
| CACCGATAGTGATACATATG+GGG | 0.671448 | 4.4:-9459124 | MS.gene28365:CDS |
| CAATTAGTATGCAATAAGGA+GGG | 0.675920 | 4.4:-9458778 | MS.gene28365:CDS |
| CAATGTTCCGAGTTATACAC+CGG | 0.682160 | 4.4:-9456165 | MS.gene28365:intron |
| CATTTGACACTGCTACAGAG+TGG | 0.682675 | 4.4:+9456654 | None:intergenic |
| GAGCGCAAGTGATTATAAGG+AGG | 0.683366 | 4.4:-9457126 | MS.gene28365:CDS |
| TGTTGCGAATGATCCACTGA+TGG | 0.687875 | 4.4:-9456991 | MS.gene28365:intron |
| GACGGTGTGGAATTTAACCA+TGG | 0.688761 | 4.4:-9459006 | MS.gene28365:CDS |
| TGTATATAGTGATACAGATG+AGG | 0.703043 | 4.4:-9459175 | MS.gene28365:CDS |
| TGTAGACGCTTTGAACGCAG+AGG | 0.705116 | 4.4:-9457359 | MS.gene28365:CDS |
| CGTACTGATGGAGATGCAGA+CGG | 0.711480 | 4.4:-9459024 | MS.gene28365:CDS |
| ACATAGACTATTGAACGCAG+CGG | 0.723695 | 4.4:+9457163 | None:intergenic |
| GGATATGGAATTCAACACAG+AGG | 0.763384 | 4.4:-9458902 | MS.gene28365:CDS |
| GTCGTGTCTGAAGATCAAGG+GGG | 0.856783 | 4.4:-9456852 | MS.gene28365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAATATGCACTA+CGG | - | chr4.4:9458937-9458956 | MS.gene28365:CDS | 15.0% |
| !!! | TCATAAACTGTTTTAAATAT+AGG | + | chr4.4:9459148-9459167 | None:intergenic | 15.0% |
| !!! | TGAAATTGTATATGATATTT+TGG | - | chr4.4:9458493-9458512 | MS.gene28365:CDS | 15.0% |
| !! | AAAGGACTTATATAATTTCA+TGG | - | chr4.4:9456772-9456791 | MS.gene28365:intron | 20.0% |
| !! | AAAGTTTAAAGATGTCAAAA+AGG | - | chr4.4:9457687-9457706 | MS.gene28365:intron | 20.0% |
| !!! | ATTATTTTAATATGCACTAC+GGG | - | chr4.4:9458938-9458957 | MS.gene28365:CDS | 20.0% |
| !!! | ATTTTCAAGGTTAATGTATT+TGG | - | chr4.4:9457775-9457794 | MS.gene28365:intron | 20.0% |
| !!! | TTGTTTTAATTGTTGTAGAA+TGG | - | chr4.4:9458826-9458845 | MS.gene28365:CDS | 20.0% |
| ! | AAAATTGATCCACCATTATT+TGG | + | chr4.4:9458967-9458986 | None:intergenic | 25.0% |
| ! | AAATGATGATATAAGGGATA+TGG | - | chr4.4:9456301-9456320 | MS.gene28365:CDS | 25.0% |
| ! | AATTAAAGCACAAGCAAAAA+TGG | + | chr4.4:9457068-9457087 | None:intergenic | 25.0% |
| ! | ATATAATTTCATGGATCATC+AGG | - | chr4.4:9456781-9456800 | MS.gene28365:intron | 25.0% |
| ! | ATATCCACTAAAAATGACAA+GGG | + | chr4.4:9457026-9457045 | None:intergenic | 25.0% |
| ! | ATGTGACAAATGATGATATA+AGG | - | chr4.4:9456294-9456313 | MS.gene28365:CDS | 25.0% |
| ! | CAGCAAATATACTATAACAA+AGG | + | chr4.4:9458763-9458782 | None:intergenic | 25.0% |
| ! | GATCGAAAAAATAAGAAGAA+TGG | - | chr4.4:9456470-9456489 | MS.gene28365:intron | 25.0% |
| ! | GTATCACTATATACATCAAA+AGG | + | chr4.4:9456038-9456057 | None:intergenic | 25.0% |
| ! | GTATTATTTGCAAAATACCA+CGG | - | chr4.4:9456359-9456378 | MS.gene28365:CDS | 25.0% |
| ! | TAAACAATCAAAATACTCAC+CGG | + | chr4.4:9459075-9459094 | None:intergenic | 25.0% |
| ! | TATATCCACTAAAAATGACA+AGG | + | chr4.4:9457027-9457046 | None:intergenic | 25.0% |
| ! | TATTATTTGCAAAATACCAC+GGG | - | chr4.4:9456360-9456379 | MS.gene28365:CDS | 25.0% |
| ! | TGTGACAAATGATGATATAA+GGG | - | chr4.4:9456295-9456314 | MS.gene28365:CDS | 25.0% |
| !! | CAAAAAAGATGTAGCTTTTT+CGG | - | chr4.4:9457798-9457817 | MS.gene28365:intron | 25.0% |
| !! | GACATCTTTAAACTTTTTAC+CGG | + | chr4.4:9457683-9457702 | None:intergenic | 25.0% |
| !! | TCAATGTTGATTGTGATATT+TGG | + | chr4.4:9458730-9458749 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTACCTTCTT+GGG | + | chr4.4:9458007-9458026 | None:intergenic | 25.0% |
| !!! | GGTTCTAAATTTGTTTTCAA+AGG | - | chr4.4:9457117-9457136 | MS.gene28365:CDS | 25.0% |
| !!! | TAAATTTGTTGCAAGTGATA+AGG | - | chr4.4:9458194-9458213 | MS.gene28365:intron | 25.0% |
| !!! | TTATTTTAATATGCACTACG+GGG | - | chr4.4:9458939-9458958 | MS.gene28365:CDS | 25.0% |
| !!! | TTTTTTCATCATTACCTTCT+TGG | + | chr4.4:9458008-9458027 | None:intergenic | 25.0% |
| AAACAATAGAGACATACAAG+TGG | - | chr4.4:9457095-9457114 | MS.gene28365:CDS | 30.0% | |
| AACAAATACAAGCACTAGAA+AGG | - | chr4.4:9458687-9458706 | MS.gene28365:CDS | 30.0% | |
| AACAATAGAGACATACAAGT+GGG | - | chr4.4:9457096-9457115 | MS.gene28365:CDS | 30.0% | |
| AAGGGTTAAAATACAAGATG+GGG | - | chr4.4:9456805-9456824 | MS.gene28365:CDS | 30.0% | |
| AATTATGCAAGAAATCCACA+AGG | + | chr4.4:9457537-9457556 | None:intergenic | 30.0% | |
| ACAAATACAAGCACTAGAAA+GGG | - | chr4.4:9458688-9458707 | MS.gene28365:CDS | 30.0% | |
| ACCTATAGAAAGAACAAGTA+TGG | - | chr4.4:9456995-9457014 | MS.gene28365:CDS | 30.0% | |
| ATCACTTGCAACAAATTTAC+TGG | + | chr4.4:9458193-9458212 | None:intergenic | 30.0% | |
| ATCATTCGCAACAAATTTGT+TGG | + | chr4.4:9458220-9458239 | None:intergenic | 30.0% | |
| ATGTGAAACGTGATTCTAAT+GGG | - | chr4.4:9456402-9456421 | MS.gene28365:intron | 30.0% | |
| CAAGGGTTAAAATACAAGAT+GGG | - | chr4.4:9456804-9456823 | MS.gene28365:intron | 30.0% | |
| CAATTAGTATGCAATAAGGA+GGG | - | chr4.4:9456440-9456459 | MS.gene28365:intron | 30.0% | |
| GAGTTTACATTTACAGATGA+TGG | - | chr4.4:9456890-9456909 | MS.gene28365:CDS | 30.0% | |
| GATTCATTATCAGACTCAAT+AGG | + | chr4.4:9458403-9458422 | None:intergenic | 30.0% | |
| GGTGGGTAAAAAGAATTTAT+CGG | - | chr4.4:9457392-9457411 | MS.gene28365:CDS | 30.0% | |
| GTAAGAACATGTCATATCTT+GGG | - | chr4.4:9456701-9456720 | MS.gene28365:intron | 30.0% | |
| GTTCTAATTGTAGAAATCCA+GGG | - | chr4.4:9458304-9458323 | MS.gene28365:intron | 30.0% | |
| TATCAACTTCACTCAATTTG+CGG | + | chr4.4:9456649-9456668 | None:intergenic | 30.0% | |
| TATCCACTAAAAATGACAAG+GGG | + | chr4.4:9457025-9457044 | None:intergenic | 30.0% | |
| TCAATTAGTATGCAATAAGG+AGG | - | chr4.4:9456439-9456458 | MS.gene28365:intron | 30.0% | |
| TCCATACTTGTTCTTTCTAT+AGG | + | chr4.4:9456999-9457018 | None:intergenic | 30.0% | |
| TGTAAGAACATGTCATATCT+TGG | - | chr4.4:9456700-9456719 | MS.gene28365:intron | 30.0% | |
| TGTATATAGTGATACAGATG+AGG | - | chr4.4:9456043-9456062 | MS.gene28365:CDS | 30.0% | |
| TGTTCTAATTGTAGAAATCC+AGG | - | chr4.4:9458303-9458322 | MS.gene28365:intron | 30.0% | |
| TTCTAACACCACACAAAAAA+TGG | + | chr4.4:9457453-9457472 | None:intergenic | 30.0% | |
| ! | ATTTTTCATGTCCAAAGTCA+CGG | + | chr4.4:9458858-9458877 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTGTCATACA+TGG | + | chr4.4:9457143-9457162 | None:intergenic | 30.0% |
| !! | ATTTTGACCTATCAAACAAC+AGG | - | chr4.4:9457371-9457390 | MS.gene28365:CDS | 30.0% |
| !!! | ACGCCTAGAAAACATTTTTT+GGG | - | chr4.4:9456913-9456932 | MS.gene28365:intron | 30.0% |
| !!! | CATATCTTGGGTTTTTTGAT+GGG | - | chr4.4:9456713-9456732 | MS.gene28365:intron | 30.0% |
| !!! | TCATATCTTGGGTTTTTTGA+TGG | - | chr4.4:9456712-9456731 | MS.gene28365:intron | 30.0% |
| !!! | TGGAAACATTGTCATTTTCA+AGG | - | chr4.4:9457762-9457781 | MS.gene28365:intron | 30.0% |
| AAATGGACATGACAAGGATA+AGG | - | chr4.4:9458167-9458186 | MS.gene28365:intron | 35.0% | |
| AAGATAAATAGCCGTCATGA+GGG | - | chr4.4:9458144-9458163 | MS.gene28365:intron | 35.0% | |
| ACACCGATAGTGATACATAT+GGG | - | chr4.4:9456093-9456112 | MS.gene28365:intron | 35.0% | |
| ACTTCATGGCACAAATAATG+TGG | + | chr4.4:9457897-9457916 | None:intergenic | 35.0% | |
| AGGACTTGGGTTTATCAAAA+AGG | - | chr4.4:9456754-9456773 | MS.gene28365:intron | 35.0% | |
| AGTGTTAGAATGTGATGAGA+GGG | + | chr4.4:9459013-9459032 | None:intergenic | 35.0% | |
| ATATAGTGATACAGATGAGG+TGG | - | chr4.4:9456046-9456065 | MS.gene28365:CDS | 35.0% | |
| ATCAAATGGACAAAACGCAA+AGG | + | chr4.4:9456617-9456636 | None:intergenic | 35.0% | |
| ATCCATGTTGTCATACTTCA+TGG | + | chr4.4:9457911-9457930 | None:intergenic | 35.0% | |
| CTGAAAAGTTTGAATCTGAG+TGG | - | chr4.4:9457332-9457351 | MS.gene28365:CDS | 35.0% | |
| CTTCATGGCACAAATAATGT+GGG | + | chr4.4:9457896-9457915 | None:intergenic | 35.0% | |
| GAAGCTTCAAAGATATTCAC+CGG | - | chr4.4:9457661-9457680 | MS.gene28365:intron | 35.0% | |
| GAGTTGTGTTTCCAAATACA+AGG | - | chr4.4:9457206-9457225 | MS.gene28365:CDS | 35.0% | |
| GATGTGAAACGTGATTCTAA+TGG | - | chr4.4:9456401-9456420 | MS.gene28365:intron | 35.0% | |
| GCAAGGGTTAAAATACAAGA+TGG | - | chr4.4:9456803-9456822 | MS.gene28365:intron | 35.0% | |
| GCGTCAATTAGTATGCAATA+AGG | - | chr4.4:9456436-9456455 | MS.gene28365:intron | 35.0% | |
| GTATGACAAACATCCAAAAG+CGG | - | chr4.4:9457144-9457163 | MS.gene28365:CDS | 35.0% | |
| GTGGAATTTAACCATGGTAA+TGG | - | chr4.4:9456218-9456237 | MS.gene28365:CDS | 35.0% | |
| TAACACCATACCCAACATTA+TGG | + | chr4.4:9458918-9458937 | None:intergenic | 35.0% | |
| TAAGATAAATAGCCGTCATG+AGG | - | chr4.4:9458143-9458162 | MS.gene28365:intron | 35.0% | |
| TATCATTACTCATAGACAGC+TGG | + | chr4.4:9458531-9458550 | None:intergenic | 35.0% | |
| TCACTCAATTTGCGGTAATT+AGG | + | chr4.4:9456641-9456660 | None:intergenic | 35.0% | |
| TTAGAACAACATCTTGTCCT+CGG | + | chr4.4:9458291-9458310 | None:intergenic | 35.0% | |
| ! | AAAGTCTGATTTGCAAGAGA+TGG | - | chr4.4:9457941-9457960 | MS.gene28365:intron | 35.0% |
| ! | AGGTTTGACTATGAGTGTTT+TGG | - | chr4.4:9456950-9456969 | MS.gene28365:intron | 35.0% |
| ! | CAAGTTGGAACCATAATGTT+GGG | - | chr4.4:9458905-9458924 | MS.gene28365:CDS | 35.0% |
| ! | CACTCAGATTCAAACTTTTC+AGG | + | chr4.4:9457334-9457353 | None:intergenic | 35.0% |
| ! | CTGCCCAAAAAATGTTTTCT+AGG | + | chr4.4:9456919-9456938 | None:intergenic | 35.0% |
| ! | GTTGATAAACAAGTTGCTAG+TGG | - | chr4.4:9456662-9456681 | MS.gene28365:CDS | 35.0% |
| ! | TAAGAGCGCAAGTGATTATA+AGG | - | chr4.4:9458089-9458108 | MS.gene28365:intron | 35.0% |
| ! | TTATCGGTTGAAGAGAATGT+GGG | - | chr4.4:9457408-9457427 | MS.gene28365:CDS | 35.0% |
| ! | TTTAGTGGATATAACCACCA+TGG | - | chr4.4:9457034-9457053 | MS.gene28365:CDS | 35.0% |
| ! | TTTATCGGTTGAAGAGAATG+TGG | - | chr4.4:9457407-9457426 | MS.gene28365:CDS | 35.0% |
| ! | TTTGAGTTACTTCCAAGGTA+AGG | - | chr4.4:9456841-9456860 | MS.gene28365:CDS | 35.0% |
| ! | TTTTTCATGTCCAAAGTCAC+GGG | + | chr4.4:9458857-9458876 | None:intergenic | 35.0% |
| !! | ATTATAAGGAGGCTCTAGAA+GGG | - | chr4.4:9458103-9458122 | MS.gene28365:intron | 35.0% |
| !! | CAAAAATGGTTGTTTCTCCA+TGG | + | chr4.4:9457054-9457073 | None:intergenic | 35.0% |
| !! | TGCTGAAAATTGTGTTGCTT+TGG | - | chr4.4:9458778-9458797 | MS.gene28365:CDS | 35.0% |
| !!! | AAACCCCTTGTCATTTTTAG+TGG | - | chr4.4:9457019-9457038 | MS.gene28365:CDS | 35.0% |
| !!! | GACGCCTAGAAAACATTTTT+TGG | - | chr4.4:9456912-9456931 | MS.gene28365:intron | 35.0% |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | - | chr4.4:9456722-9456741 | MS.gene28365:intron | 35.0% |
| !!! | GTGTTGACTTTTTACTCCTA+CGG | + | chr4.4:9458269-9458288 | None:intergenic | 35.0% |
| !!! | TCAAACTTTTCAGGTGTACA+TGG | + | chr4.4:9457325-9457344 | None:intergenic | 35.0% |
| !!! | TGTTGACTTTTTACTCCTAC+GGG | + | chr4.4:9458268-9458287 | None:intergenic | 35.0% |
| AAAAGCGGTGATTACTGATG+GGG | - | chr4.4:9457159-9457178 | MS.gene28365:CDS | 40.0% | |
| AAAATGACCATGTTTCGTCG+AGG | - | chr4.4:9458024-9458043 | MS.gene28365:intron | 40.0% | |
| AAACATCGCAGTGACTATTG+TGG | - | chr4.4:9459197-9459216 | MS.gene28365:CDS | 40.0% | |
| AAATGACCATGTTTCGTCGA+GGG | - | chr4.4:9458025-9458044 | MS.gene28365:intron | 40.0% | |
| AACAACGATGTTCGTACTGA+TGG | - | chr4.4:9456182-9456201 | MS.gene28365:CDS | 40.0% | |
| AACGCAAAGGAGCTAATTCA+TGG | + | chr4.4:9456604-9456623 | None:intergenic | 40.0% | |
| AATGGTGTTTGCAATGAGCA+AGG | - | chr4.4:9456236-9456255 | MS.gene28365:CDS | 40.0% | |
| ACATAGACTATTGAACGCAG+CGG | + | chr4.4:9458058-9458077 | None:intergenic | 40.0% | |
| ACGACTTTGTTCGTACGATT+TGG | - | chr4.4:9456549-9456568 | MS.gene28365:CDS | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | - | chr4.4:9457469-9457488 | MS.gene28365:CDS | 40.0% | |
| AGATGTCAAAAAGGCGATAG+AGG | - | chr4.4:9457696-9457715 | MS.gene28365:intron | 40.0% | |
| AGCTAATTCATGGTTGTGAG+AGG | + | chr4.4:9456594-9456613 | None:intergenic | 40.0% | |
| AGTTTGAATCTGAGTGGAAG+AGG | - | chr4.4:9457338-9457357 | MS.gene28365:CDS | 40.0% | |
| ATACTCACCGGTGTATAACT+CGG | + | chr4.4:9459063-9459082 | None:intergenic | 40.0% | |
| ATGGTGTTTGCAATGAGCAA+GGG | - | chr4.4:9456237-9456256 | MS.gene28365:CDS | 40.0% | |
| ATTTCATGGATCATCAGGCA+AGG | - | chr4.4:9456786-9456805 | MS.gene28365:intron | 40.0% | |
| ATTTCGTCTGCAACTTGTCA+AGG | + | chr4.4:9457828-9457847 | None:intergenic | 40.0% | |
| CAAAAGCGGTGATTACTGAT+GGG | - | chr4.4:9457158-9457177 | MS.gene28365:CDS | 40.0% | |
| CAAGGGAAAGAGAACTTTGA+TGG | - | chr4.4:9456254-9456273 | MS.gene28365:CDS | 40.0% | |
| CAATGTTCCGAGTTATACAC+CGG | - | chr4.4:9459053-9459072 | MS.gene28365:CDS | 40.0% | |
| CACCCCATATGTATCACTAT+CGG | + | chr4.4:9456099-9456118 | None:intergenic | 40.0% | |
| CACCGATAGTGATACATATG+GGG | - | chr4.4:9456094-9456113 | MS.gene28365:intron | 40.0% | |
| CACTGGTATTACACGTAAGA+GGG | - | chr4.4:9458609-9458628 | MS.gene28365:CDS | 40.0% | |
| CAGTGTTAGAATGTGATGAG+AGG | + | chr4.4:9459014-9459033 | None:intergenic | 40.0% | |
| CATTGAACGAGATGAAGATG+AGG | - | chr4.4:9457738-9457757 | MS.gene28365:intron | 40.0% | |
| CATTGCAAACACCATTACCA+TGG | + | chr4.4:9456232-9456251 | None:intergenic | 40.0% | |
| CGCAGAACAATTAGTTCGAA+TGG | + | chr4.4:9456513-9456532 | None:intergenic | 40.0% | |
| CTCTTGCAAATCAGACTTTC+AGG | + | chr4.4:9457940-9457959 | None:intergenic | 40.0% | |
| GACACCGATAGTGATACATA+TGG | - | chr4.4:9456092-9456111 | MS.gene28365:intron | 40.0% | |
| GCACAAATAATGTGGGAACA+TGG | + | chr4.4:9457889-9457908 | None:intergenic | 40.0% | |
| GCTAATTCATGGTTGTGAGA+GGG | + | chr4.4:9456593-9456612 | None:intergenic | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | - | chr4.4:9456316-9456335 | MS.gene28365:CDS | 40.0% | |
| GTTTGAATCTGAGTGGAAGA+GGG | - | chr4.4:9457339-9457358 | MS.gene28365:CDS | 40.0% | |
| TATCAGTATCAGCCTTACCT+TGG | + | chr4.4:9456856-9456875 | None:intergenic | 40.0% | |
| TATGAGTGCGTTGAAGAATG+TGG | - | chr4.4:9459163-9459182 | MS.gene28365:CDS | 40.0% | |
| TATGGTTCCAACTTGCACAA+TGG | + | chr4.4:9458900-9458919 | None:intergenic | 40.0% | |
| TGACCTATCAAACAACAGGT+GGG | - | chr4.4:9457375-9457394 | MS.gene28365:CDS | 40.0% | |
| TGATAAACCCAAGTCCTTCA+TGG | + | chr4.4:9456751-9456770 | None:intergenic | 40.0% | |
| TGCCATGAAGTATGACAACA+TGG | - | chr4.4:9457906-9457925 | MS.gene28365:intron | 40.0% | |
| TGCGGTAATTAGGCATCAAA+TGG | + | chr4.4:9456631-9456650 | None:intergenic | 40.0% | |
| TGGAACCATAATGTTGGGTA+TGG | - | chr4.4:9458910-9458929 | MS.gene28365:CDS | 40.0% | |
| TTCATCATTACCTTCTTGGG+AGG | + | chr4.4:9458004-9458023 | None:intergenic | 40.0% | |
| TTCGAATGGTTAGCGTAGAT+CGG | + | chr4.4:9456499-9456518 | None:intergenic | 40.0% | |
| TTGACCTATCAAACAACAGG+TGG | - | chr4.4:9457374-9457393 | MS.gene28365:CDS | 40.0% | |
| TTTCATGGATCATCAGGCAA+GGG | - | chr4.4:9456787-9456806 | MS.gene28365:intron | 40.0% | |
| TTTGGGCAGATTCTACTAGT+AGG | - | chr4.4:9456930-9456949 | MS.gene28365:intron | 40.0% | |
| ! | GCAAGTTGGAACCATAATGT+TGG | - | chr4.4:9458904-9458923 | MS.gene28365:CDS | 40.0% |
| ! | GCTACTTTGAGTTACTTCCA+AGG | - | chr4.4:9456836-9456855 | MS.gene28365:CDS | 40.0% |
| ! | TTACCCACCTGTTGTTTGAT+AGG | + | chr4.4:9457381-9457400 | None:intergenic | 40.0% |
| !! | AAATGGTTGTTTCTCCATGG+TGG | + | chr4.4:9457051-9457070 | None:intergenic | 40.0% |
| !! | GATTATAAGGAGGCTCTAGA+AGG | - | chr4.4:9458102-9458121 | MS.gene28365:intron | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | - | chr4.4:9456725-9456744 | MS.gene28365:intron | 40.0% |
| !!! | ATGCGAGACCATTTTTTGTG+TGG | - | chr4.4:9457442-9457461 | MS.gene28365:CDS | 40.0% |
| !!! | CCACAAGGCTATTTTTGTGT+CGG | + | chr4.4:9457522-9457541 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTGATGGGTCAAA+AGG | - | chr4.4:9456721-9456740 | MS.gene28365:intron | 40.0% |
| AAGACAGCCATTGTGCAAGT+TGG | - | chr4.4:9458890-9458909 | MS.gene28365:CDS | 45.0% | |
| AATAGCCGTCATGAGGGAAA+TGG | - | chr4.4:9458150-9458169 | MS.gene28365:intron | 45.0% | |
| AATGACCATGTTTCGTCGAG+GGG | - | chr4.4:9458026-9458045 | MS.gene28365:intron | 45.0% | |
| ACACCAATTCCAGCAAGTTC+TGG | + | chr4.4:9458348-9458367 | None:intergenic | 45.0% | |
| AGCATTTCGATGCAAATGCC+AGG | + | chr4.4:9457245-9457264 | None:intergenic | 45.0% | |
| CAAAGGCGATGCCTTGTATT+TGG | + | chr4.4:9457220-9457239 | None:intergenic | 45.0% | |
| CACTCTGTAGCAGTGTCAAA+TGG | - | chr4.4:9458565-9458584 | MS.gene28365:CDS | 45.0% | |
| CATGTCCATTTCCCTCATGA+CGG | + | chr4.4:9458158-9458177 | None:intergenic | 45.0% | |
| CATTTGACACTGCTACAGAG+TGG | + | chr4.4:9458567-9458586 | None:intergenic | 45.0% | |
| CCAAAAGCGGTGATTACTGA+TGG | - | chr4.4:9457157-9457176 | MS.gene28365:CDS | 45.0% | |
| CCTTTCTTACTTCAAACCCG+TGG | + | chr4.4:9456379-9456398 | None:intergenic | 45.0% | |
| CCTTTGACATTCACCATCAG+TGG | + | chr4.4:9458243-9458262 | None:intergenic | 45.0% | |
| CGATAGTGATACATATGGGG+TGG | - | chr4.4:9456097-9456116 | MS.gene28365:intron | 45.0% | |
| GAACGAGATGAAGATGAGGA+TGG | - | chr4.4:9457742-9457761 | MS.gene28365:intron | 45.0% | |
| GACGGTGTGGAATTTAACCA+TGG | - | chr4.4:9456212-9456231 | MS.gene28365:CDS | 45.0% | |
| GAGCGCAAGTGATTATAAGG+AGG | - | chr4.4:9458092-9458111 | MS.gene28365:intron | 45.0% | |
| GGAGTAAAAAGTCAACACCG+AGG | - | chr4.4:9458271-9458290 | MS.gene28365:intron | 45.0% | |
| GTCAATGCAGTTGTCAGCAT+AGG | + | chr4.4:9457628-9457647 | None:intergenic | 45.0% | |
| GTGTCGTGTCTGAAGATCAA+GGG | - | chr4.4:9458364-9458383 | MS.gene28365:intron | 45.0% | |
| TCTAACACTGCTCTGCATAC+TGG | - | chr4.4:9459024-9459043 | MS.gene28365:CDS | 45.0% | |
| TCTGTAGCAGTGTCAAATGG+TGG | - | chr4.4:9458568-9458587 | MS.gene28365:CDS | 45.0% | |
| TGAGGGAAATGGACATGACA+AGG | - | chr4.4:9458161-9458180 | MS.gene28365:intron | 45.0% | |
| TGTCGTGTCTGAAGATCAAG+GGG | - | chr4.4:9458365-9458384 | MS.gene28365:intron | 45.0% | |
| TGTGATGAGAGGGTAGTTGT+CGG | + | chr4.4:9459003-9459022 | None:intergenic | 45.0% | |
| TGTTGCGAATGATCCACTGA+TGG | - | chr4.4:9458227-9458246 | MS.gene28365:intron | 45.0% | |
| ! | CCACGGGTTTGAAGTAAGAA+AGG | - | chr4.4:9456376-9456395 | MS.gene28365:CDS | 45.0% |
| ! | CCACTGATGGTGAATGTCAA+AGG | - | chr4.4:9458240-9458259 | MS.gene28365:intron | 45.0% |
| ! | CCATCAGTAATCACCGCTTT+TGG | + | chr4.4:9457160-9457179 | None:intergenic | 45.0% |
| ! | CCGACACAAAAATAGCCTTG+TGG | - | chr4.4:9457519-9457538 | MS.gene28365:CDS | 45.0% |
| ! | CGAGAAGTTGAGAAAAGCAC+TGG | - | chr4.4:9458592-9458611 | MS.gene28365:CDS | 45.0% |
| ! | GCACTGGTATTACACGTAAG+AGG | - | chr4.4:9458608-9458627 | MS.gene28365:CDS | 45.0% |
| !! | TGTCCAGAACTTGCTGGAAT+TGG | - | chr4.4:9458342-9458361 | MS.gene28365:intron | 45.0% |
| AATGGTGTGACCCGTGACTT+TGG | - | chr4.4:9458844-9458863 | MS.gene28365:CDS | 50.0% | |
| ATGAGAGGGTAGTTGTCGGA+GGG | + | chr4.4:9458999-9459018 | None:intergenic | 50.0% | |
| GAAATCCAGGGCACACGATA+CGG | - | chr4.4:9458316-9458335 | MS.gene28365:intron | 50.0% | |
| GCTAGTGGTCTACATTCGCA+AGG | - | chr4.4:9456677-9456696 | MS.gene28365:CDS | 50.0% | |
| GTAGTTGTCGGAGGGAATTG+TGG | + | chr4.4:9458991-9459010 | None:intergenic | 50.0% | |
| GTCGTGTCTGAAGATCAAGG+GGG | - | chr4.4:9458366-9458385 | MS.gene28365:intron | 50.0% | |
| TCGTCATTTGCCTCCCAAGA+AGG | - | chr4.4:9457991-9458010 | MS.gene28365:intron | 50.0% | |
| TCTGAAGATCAAGGGGGAGA+AGG | - | chr4.4:9458372-9458391 | MS.gene28365:intron | 50.0% | |
| ! | CACTACGGGGTGCCAAATAA+TGG | - | chr4.4:9458952-9458971 | MS.gene28365:CDS | 50.0% |
| ! | CGTACTGATGGAGATGCAGA+CGG | - | chr4.4:9456194-9456213 | MS.gene28365:CDS | 50.0% |
| ! | GGTGTCGTGTCTGAAGATCA+AGG | - | chr4.4:9458363-9458382 | MS.gene28365:intron | 50.0% |
| ! | TACGGGGTGCCAAATAATGG+TGG | - | chr4.4:9458955-9458974 | MS.gene28365:CDS | 50.0% |
| ! | TGTAGACGCTTTGAACGCAG+AGG | - | chr4.4:9457859-9457878 | MS.gene28365:intron | 50.0% |
| !! | TGAATGTCAAAGGTGCCCGT+AGG | - | chr4.4:9458250-9458269 | MS.gene28365:intron | 50.0% |
| AAGGGTGGCCATGAAGGACT+TGG | - | chr4.4:9456740-9456759 | MS.gene28365:intron | 55.0% | |
| AAGTGCCCCTCGACGAAACA+TGG | + | chr4.4:9458034-9458053 | None:intergenic | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | - | chr4.4:9456741-9456760 | MS.gene28365:intron | 55.0% | |
| GATGAGAGGGTAGTTGTCGG+AGG | + | chr4.4:9459000-9459019 | None:intergenic | 55.0% | |
| GATGCAAATGCCAGGCGCAA+AGG | + | chr4.4:9457237-9457256 | None:intergenic | 55.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | - | chr4.4:9456734-9456753 | MS.gene28365:intron | 55.0% | |
| TGATGGAGATGCAGACGGTG+TGG | - | chr4.4:9456199-9456218 | MS.gene28365:CDS | 55.0% | |
| CGGACGTGTCCAGAACTTGC+TGG | - | chr4.4:9458336-9458355 | MS.gene28365:intron | 60.0% | |
| CACGTCCGTATCGTGTGCCC+TGG | + | chr4.4:9458324-9458343 | None:intergenic | 65.0% | |
| !! | CAAGGCATCGCCTTTGCGCC+TGG | - | chr4.4:9457224-9457243 | MS.gene28365:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9456008 | 9459232 | 9456008 | ID=MS.gene28365 |
| chr4.4 | mRNA | 9456008 | 9459232 | 9456008 | ID=MS.gene28365.t1;Parent=MS.gene28365 |
| chr4.4 | exon | 9458383 | 9459232 | 9458383 | ID=MS.gene28365.t1.exon1;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9458383 | 9459232 | 9458383 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| chr4.4 | exon | 9456992 | 9457575 | 9456992 | ID=MS.gene28365.t1.exon2;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9456992 | 9457575 | 9456992 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| chr4.4 | exon | 9456805 | 9456915 | 9456805 | ID=MS.gene28365.t1.exon3;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9456805 | 9456915 | 9456805 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| chr4.4 | exon | 9456487 | 9456708 | 9456487 | ID=MS.gene28365.t1.exon4;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9456487 | 9456708 | 9456487 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| chr4.4 | exon | 9456166 | 9456396 | 9456166 | ID=MS.gene28365.t1.exon5;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9456166 | 9456396 | 9456166 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| chr4.4 | exon | 9456008 | 9456079 | 9456008 | ID=MS.gene28365.t1.exon6;Parent=MS.gene28365.t1 |
| chr4.4 | CDS | 9456008 | 9456079 | 9456008 | ID=cds.MS.gene28365.t1;Parent=MS.gene28365.t1 |
| Gene Sequence |
| Protein sequence |
