Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28376.t1 | RHN76102.1 | 86.1 | 108 | 15 | 0 | 32 | 139 | 251 | 358 | 7.00E-41 | 178.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28376.t1 | Q10NY2 | 73.4 | 109 | 26 | 2 | 293 | 401 | 72 | 177 | 4.6e-33 | 143.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28376.t1 | G7IRV1 | 86.1 | 108 | 15 | 0 | 32 | 139 | 323 | 430 | 5.0e-41 | 178.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28376.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28376.t1 | MTR_2g097410 | 86.111 | 108 | 15 | 0 | 32 | 139 | 323 | 430 | 4.95e-53 | 188 |
| MS.gene28376.t1 | MTR_4g009840 | 93.671 | 79 | 5 | 0 | 323 | 401 | 99 | 177 | 2.15e-39 | 150 |
| MS.gene28376.t1 | MTR_2g104140 | 92.405 | 79 | 6 | 0 | 323 | 401 | 99 | 177 | 8.05e-39 | 149 |
| MS.gene28376.t1 | MTR_2g104140 | 74.312 | 109 | 25 | 2 | 293 | 401 | 87 | 192 | 8.10e-39 | 149 |
| MS.gene28376.t1 | MTR_2g104140 | 92.405 | 79 | 6 | 0 | 323 | 401 | 114 | 192 | 8.72e-39 | 149 |
| MS.gene28376.t1 | MTR_2g104140 | 92.405 | 79 | 6 | 0 | 323 | 401 | 114 | 192 | 8.80e-39 | 149 |
| MS.gene28376.t1 | MTR_2g104140 | 92.405 | 79 | 6 | 0 | 323 | 401 | 99 | 177 | 9.11e-39 | 149 |
| MS.gene28376.t1 | MTR_4g114980 | 86.076 | 79 | 11 | 0 | 323 | 401 | 99 | 177 | 3.40e-36 | 141 |
| MS.gene28376.t1 | MTR_4g114980 | 86.076 | 79 | 11 | 0 | 323 | 401 | 99 | 177 | 3.48e-36 | 141 |
| MS.gene28376.t1 | MTR_7g112460 | 82.051 | 78 | 14 | 0 | 324 | 401 | 100 | 177 | 1.21e-33 | 133 |
| MS.gene28376.t1 | MTR_1g083700 | 80.769 | 78 | 15 | 0 | 324 | 401 | 100 | 177 | 2.54e-33 | 132 |
| MS.gene28376.t1 | MTR_4g120900 | 74.490 | 98 | 22 | 2 | 304 | 401 | 83 | 177 | 3.79e-33 | 132 |
| MS.gene28376.t1 | MTR_7g069750 | 93.443 | 61 | 4 | 0 | 324 | 384 | 11 | 71 | 3.71e-32 | 116 |
| MS.gene28376.t1 | MTR_4g132810 | 82.090 | 67 | 10 | 1 | 199 | 263 | 21 | 87 | 2.32e-29 | 113 |
| MS.gene28376.t1 | MTR_4g064150 | 62.667 | 75 | 28 | 0 | 59 | 133 | 340 | 414 | 8.74e-25 | 107 |
| MS.gene28376.t1 | MTR_3g087300 | 73.239 | 71 | 18 | 1 | 30 | 99 | 138 | 208 | 1.25e-24 | 100 |
| MS.gene28376.t1 | MTR_4g064160 | 53.061 | 98 | 44 | 1 | 42 | 137 | 276 | 373 | 1.90e-23 | 103 |
| MS.gene28376.t1 | MTR_7g062120 | 59.211 | 76 | 31 | 0 | 62 | 137 | 354 | 429 | 8.52e-22 | 98.2 |
| MS.gene28376.t1 | MTR_4g064120 | 57.500 | 80 | 32 | 1 | 61 | 138 | 235 | 314 | 1.94e-21 | 97.1 |
| MS.gene28376.t1 | MTR_4g064180 | 60.000 | 70 | 28 | 0 | 61 | 130 | 235 | 304 | 8.32e-20 | 92.0 |
| MS.gene28376.t1 | MTR_2g097390 | 48.276 | 87 | 45 | 0 | 51 | 137 | 246 | 332 | 2.37e-18 | 87.4 |
| MS.gene28376.t1 | MTR_2g097350 | 51.389 | 72 | 35 | 0 | 66 | 137 | 260 | 331 | 1.15e-17 | 85.5 |
| MS.gene28376.t1 | MTR_5g085300 | 47.561 | 82 | 40 | 2 | 183 | 262 | 29 | 109 | 6.69e-17 | 79.0 |
| MS.gene28376.t1 | MTR_5g085300 | 47.561 | 82 | 40 | 2 | 183 | 262 | 29 | 109 | 9.52e-17 | 78.6 |
| MS.gene28376.t1 | MTR_2g097310 | 53.521 | 71 | 30 | 1 | 70 | 137 | 259 | 329 | 1.31e-16 | 82.0 |
| MS.gene28376.t1 | MTR_2g065670 | 42.202 | 109 | 60 | 2 | 293 | 401 | 45 | 150 | 1.42e-16 | 82.0 |
| MS.gene28376.t1 | MTR_2g435370 | 46.154 | 91 | 47 | 1 | 311 | 401 | 89 | 177 | 1.73e-16 | 82.0 |
| MS.gene28376.t1 | MTR_5g085300 | 47.561 | 82 | 40 | 2 | 183 | 262 | 29 | 109 | 2.10e-16 | 78.2 |
| MS.gene28376.t1 | MTR_1g012820 | 45.361 | 97 | 50 | 2 | 304 | 400 | 84 | 177 | 5.12e-16 | 80.5 |
| MS.gene28376.t1 | MTR_2g097463 | 44.000 | 100 | 46 | 3 | 35 | 126 | 239 | 336 | 5.14e-14 | 74.3 |
| MS.gene28376.t1 | MTR_4g064200 | 56.061 | 66 | 28 | 1 | 74 | 139 | 278 | 342 | 9.15e-14 | 73.6 |
| MS.gene28376.t1 | MTR_2g097467 | 45.745 | 94 | 40 | 4 | 60 | 143 | 262 | 354 | 7.81e-13 | 70.5 |
| MS.gene28376.t1 | MTR_2g097473 | 41.748 | 103 | 51 | 3 | 43 | 137 | 244 | 345 | 3.13e-12 | 68.6 |
| MS.gene28376.t1 | MTR_1g019450 | 40.506 | 79 | 47 | 0 | 324 | 402 | 102 | 180 | 8.53e-12 | 64.3 |
| MS.gene28376.t1 | MTR_1g019470 | 38.384 | 99 | 58 | 2 | 304 | 402 | 85 | 180 | 1.26e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28376.t1 | AT1G15750 | 89.873 | 79 | 8 | 0 | 323 | 401 | 99 | 177 | 6.88e-38 | 146 |
| MS.gene28376.t1 | AT1G15750 | 89.873 | 79 | 8 | 0 | 323 | 401 | 99 | 177 | 6.88e-38 | 146 |
| MS.gene28376.t1 | AT1G15750 | 89.873 | 79 | 8 | 0 | 323 | 401 | 99 | 177 | 6.88e-38 | 146 |
| MS.gene28376.t1 | AT1G15750 | 89.873 | 79 | 8 | 0 | 323 | 401 | 99 | 177 | 6.88e-38 | 146 |
| MS.gene28376.t1 | AT1G80490 | 88.608 | 79 | 9 | 0 | 323 | 401 | 99 | 177 | 3.24e-37 | 144 |
| MS.gene28376.t1 | AT1G80490 | 88.608 | 79 | 9 | 0 | 323 | 401 | 99 | 177 | 3.33e-37 | 144 |
| MS.gene28376.t1 | AT1G80490 | 88.608 | 79 | 9 | 0 | 323 | 401 | 99 | 177 | 3.33e-37 | 144 |
| MS.gene28376.t1 | AT3G15880 | 84.810 | 79 | 12 | 0 | 323 | 401 | 99 | 177 | 6.56e-35 | 137 |
| MS.gene28376.t1 | AT3G15880 | 84.810 | 79 | 12 | 0 | 323 | 401 | 99 | 177 | 6.84e-35 | 137 |
| MS.gene28376.t1 | AT3G15880 | 84.810 | 79 | 12 | 0 | 323 | 401 | 99 | 177 | 7.09e-35 | 137 |
| MS.gene28376.t1 | AT3G15880 | 84.810 | 79 | 12 | 0 | 323 | 401 | 99 | 177 | 7.09e-35 | 137 |
| MS.gene28376.t1 | AT3G16830 | 67.890 | 109 | 32 | 2 | 293 | 401 | 72 | 177 | 3.87e-34 | 135 |
| MS.gene28376.t1 | AT5G27030 | 78.481 | 79 | 17 | 0 | 323 | 401 | 99 | 177 | 5.54e-33 | 132 |
| MS.gene28376.t1 | AT5G27030 | 78.481 | 79 | 17 | 0 | 323 | 401 | 99 | 177 | 5.69e-33 | 131 |
| MS.gene28376.t1 | AT1G07530 | 36.567 | 134 | 75 | 2 | 31 | 164 | 354 | 477 | 1.49e-19 | 91.3 |
| MS.gene28376.t1 | AT2G37650 | 57.143 | 70 | 30 | 0 | 68 | 137 | 335 | 404 | 2.09e-17 | 84.7 |
| MS.gene28376.t1 | AT2G37650 | 57.143 | 70 | 30 | 0 | 68 | 137 | 323 | 392 | 2.18e-17 | 84.7 |
| MS.gene28376.t1 | AT2G29060 | 41.905 | 105 | 58 | 1 | 60 | 164 | 264 | 365 | 7.17e-17 | 83.2 |
| MS.gene28376.t1 | AT2G29060 | 41.905 | 105 | 58 | 1 | 60 | 164 | 301 | 402 | 7.78e-17 | 83.2 |
| MS.gene28376.t1 | AT1G07520 | 57.746 | 71 | 27 | 1 | 62 | 132 | 139 | 206 | 8.79e-17 | 82.4 |
| MS.gene28376.t1 | AT1G07520 | 57.746 | 71 | 27 | 1 | 62 | 132 | 139 | 206 | 8.79e-17 | 82.4 |
| MS.gene28376.t1 | AT1G07520 | 57.746 | 71 | 27 | 1 | 62 | 132 | 304 | 371 | 1.06e-16 | 82.8 |
| MS.gene28376.t1 | AT1G07520 | 57.746 | 71 | 27 | 1 | 62 | 132 | 303 | 370 | 1.12e-16 | 82.4 |
| MS.gene28376.t1 | AT1G05000 | 53.030 | 66 | 29 | 1 | 199 | 262 | 39 | 104 | 1.62e-16 | 77.4 |
| MS.gene28376.t1 | AT2G32960 | 56.923 | 65 | 26 | 1 | 200 | 262 | 48 | 112 | 1.80e-16 | 79.0 |
| MS.gene28376.t1 | AT1G05000 | 53.030 | 66 | 29 | 1 | 199 | 262 | 39 | 104 | 4.19e-16 | 77.0 |
| MS.gene28376.t1 | AT1G05000 | 53.030 | 66 | 29 | 1 | 199 | 262 | 39 | 104 | 5.49e-16 | 77.4 |
| MS.gene28376.t1 | AT4G03960 | 60.377 | 53 | 19 | 1 | 211 | 261 | 27 | 79 | 8.76e-14 | 70.1 |
| MS.gene28376.t1 | AT3G46600 | 35.484 | 124 | 76 | 3 | 34 | 157 | 137 | 256 | 1.02e-13 | 73.2 |
| MS.gene28376.t1 | AT3G46600 | 35.484 | 124 | 76 | 3 | 34 | 157 | 169 | 288 | 1.36e-13 | 72.8 |
| MS.gene28376.t1 | AT2G29065 | 59.322 | 59 | 24 | 0 | 74 | 132 | 246 | 304 | 6.05e-13 | 70.9 |
| MS.gene28376.t1 | AT5G16480 | 53.846 | 52 | 21 | 2 | 207 | 255 | 7 | 58 | 6.18e-13 | 65.1 |
| MS.gene28376.t1 | AT5G59450 | 34.400 | 125 | 70 | 3 | 13 | 131 | 160 | 278 | 1.02e-12 | 70.1 |
| MS.gene28376.t1 | AT3G02800 | 48.276 | 58 | 28 | 1 | 207 | 262 | 9 | 66 | 8.05e-12 | 64.7 |
| MS.gene28376.t1 | AT5G16480 | 53.846 | 52 | 21 | 2 | 207 | 255 | 7 | 58 | 9.71e-12 | 64.3 |
Find 79 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTTGTCAGGAAATAA+TGG | 0.201777 | 4.4:-9341404 | None:intergenic |
| CTGAAGCCGGTGATGAAAAT+TGG | 0.217340 | 4.4:+9340681 | MS.gene28376:CDS |
| ACAAGACACCTATTCTAAAA+TGG | 0.291165 | 4.4:+9340714 | MS.gene28376:CDS |
| AGGAAGCATTCTTGTCCTTC+AGG | 0.304700 | 4.4:+9338715 | MS.gene28376:CDS |
| TGGCATTAGGCTTTATCAAT+TGG | 0.323471 | 4.4:+9340384 | MS.gene28376:CDS |
| GTACAGAAATTTGAATTCAT+TGG | 0.341983 | 4.4:+9338463 | MS.gene28376:intron |
| GGCAGTTACTTTCTTGCCTC+AGG | 0.350572 | 4.4:+9338894 | MS.gene28376:intron |
| AATGAACAGTTGTCAAAGTA+TGG | 0.361823 | 4.4:+9341320 | MS.gene28376:CDS |
| GTGAATTGTTGAAGCAGATT+AGG | 0.377738 | 4.4:+9338695 | MS.gene28376:CDS |
| GAATCCGAAGTTGGCAGAAT+CGG | 0.395724 | 4.4:-9340207 | None:intergenic |
| TGTGGATTTGAGGACCCTTT+TGG | 0.396694 | 4.4:+9338627 | MS.gene28376:CDS |
| TTAGGAAATTGCAATTTGTC+AGG | 0.408882 | 4.4:-9341413 | None:intergenic |
| TCACCGGCTTCAGACCTTGT+TGG | 0.411347 | 4.4:-9340671 | None:intergenic |
| GGCATTAGGCTTTATCAATT+GGG | 0.412671 | 4.4:+9340385 | MS.gene28376:CDS |
| CTGTGTCTGCTAATGACAAT+AGG | 0.426533 | 4.4:+9338665 | MS.gene28376:CDS |
| GTTTAATGAAGAATTGTTCA+AGG | 0.447430 | 4.4:+9341176 | MS.gene28376:CDS |
| GTTGGCAGAATCGGGAAAAC+CGG | 0.448502 | 4.4:-9340198 | None:intergenic |
| AGAGGGATGTTGTGGATTTG+AGG | 0.451718 | 4.4:+9338617 | MS.gene28376:CDS |
| TGAAGCCGGTGATGAAAATT+GGG | 0.465234 | 4.4:+9340682 | MS.gene28376:CDS |
| ACACAGGTTGGTGAACTTGA+TGG | 0.468419 | 4.4:+9338562 | MS.gene28376:CDS |
| AATCCGAAGTTGGCAGAATC+GGG | 0.474703 | 4.4:-9340206 | None:intergenic |
| CGATTTCATGAATCCGAAGT+TGG | 0.479382 | 4.4:-9340216 | None:intergenic |
| GTAGCTACAGGATAGGGTTC+AGG | 0.482076 | 4.4:-9340344 | None:intergenic |
| CGAAGAAACAAGGGAGGAAG+AGG | 0.489890 | 4.4:+9338599 | MS.gene28376:CDS |
| TGCTGAAAGGTATGTTAGCA+TGG | 0.491633 | 4.4:+9339128 | MS.gene28376:CDS |
| TTTGTCAGGAAATAATGGAT+TGG | 0.495789 | 4.4:-9341399 | None:intergenic |
| TTTCCCGATTCTGCCAACTT+CGG | 0.501057 | 4.4:+9340203 | MS.gene28376:CDS |
| AGGGAGGAAGAGGGATGTTG+TGG | 0.530372 | 4.4:+9338609 | MS.gene28376:CDS |
| TGGCGGCACGAATGCTTCAT+CGG | 0.530987 | 4.4:-9340138 | None:intergenic |
| GTCGTTGTGTGCTGAACAAA+AGG | 0.533497 | 4.4:+9338516 | MS.gene28376:CDS |
| GTCTGCGAGGGCAGTCATGT+TGG | 0.534982 | 4.4:+9341352 | MS.gene28376:CDS |
| AGGTGATGCATCACAGAGAA+TGG | 0.535230 | 4.4:+9338735 | MS.gene28376:CDS |
| CTCTGTGATGCATCACCTGA+AGG | 0.537655 | 4.4:-9338730 | None:intergenic |
| GCAGTTACTTTCTTGCCTCA+GGG | 0.540939 | 4.4:+9338895 | MS.gene28376:CDS |
| ACCTTTCAGCATCATAGAGA+TGG | 0.543098 | 4.4:-9338935 | None:intergenic |
| TCCGCAGTAGCTACAGGATA+GGG | 0.547598 | 4.4:-9340350 | None:intergenic |
| ACACTCCTCCTTCTGATACA+TGG | 0.548999 | 4.4:-9340631 | None:intergenic |
| CACATGGTTGGTGCTGGTAA+CGG | 0.549932 | 4.4:+9338787 | MS.gene28376:CDS |
| CTTTATCAATTGGGTATCGA+TGG | 0.551786 | 4.4:+9340394 | MS.gene28376:CDS |
| GAAGCGCACATGGTTGGTGC+TGG | 0.557689 | 4.4:+9338781 | MS.gene28376:CDS |
| GCCGCCACTCAACTTCGCTA+TGG | 0.562249 | 4.4:+9340154 | MS.gene28376:CDS |
| CTCCGCAGTAGCTACAGGAT+AGG | 0.565965 | 4.4:-9340351 | None:intergenic |
| TCCTCAGTTGTAGTGCTGAA+AGG | 0.572886 | 4.4:+9339115 | MS.gene28376:CDS |
| TATTGCCATGTATCAGAAGG+AGG | 0.578751 | 4.4:+9340626 | MS.gene28376:CDS |
| TTCAACTCAGACTCACATCA+TGG | 0.580510 | 4.4:+9338274 | MS.gene28376:CDS |
| AATCGCACAGCTATTGACAT+TGG | 0.587279 | 4.4:+9341200 | MS.gene28376:CDS |
| ACCTTTCAGCACTACAACTG+AGG | 0.587395 | 4.4:-9339116 | None:intergenic |
| AGTTGAAGAAGCGACGACAT+AGG | 0.593770 | 4.4:-9338258 | None:intergenic |
| TGAACAAAAGGATGGATCAA+TGG | 0.600419 | 4.4:+9338528 | MS.gene28376:CDS |
| AGTTACTTTCTTGCCTCAGG+GGG | 0.601989 | 4.4:+9338897 | MS.gene28376:CDS |
| ATTGGGTATCGATGGCTGCA+AGG | 0.602334 | 4.4:+9340402 | MS.gene28376:CDS |
| GCGATTGAAGCGCACATGGT+TGG | 0.606197 | 4.4:+9338775 | MS.gene28376:CDS |
| TTGTGTGCTGAACAAAAGGA+TGG | 0.608825 | 4.4:+9338520 | MS.gene28376:CDS |
| TGGTGAACTTGATGGAGGGA+AGG | 0.610203 | 4.4:+9338570 | MS.gene28376:CDS |
| GCTGAAAGGTATGTTAGCAT+GGG | 0.611485 | 4.4:+9339129 | MS.gene28376:CDS |
| AAGGCGCGTTCGAAGAAACA+AGG | 0.611889 | 4.4:+9338589 | MS.gene28376:CDS |
| AGACCAACAAGGTCTGAAGC+CGG | 0.614018 | 4.4:+9340668 | MS.gene28376:CDS |
| TAAGGACACTCATCAATCAA+AGG | 0.619686 | 4.4:+9341453 | MS.gene28376:CDS |
| CAGTTACTTTCTTGCCTCAG+GGG | 0.626731 | 4.4:+9338896 | MS.gene28376:CDS |
| TAAAGAGTACAGTTGTCACT+CGG | 0.629130 | 4.4:-9338311 | None:intergenic |
| CAGGTTGGTGAACTTGATGG+AGG | 0.633962 | 4.4:+9338565 | MS.gene28376:CDS |
| ACAAAAGGATGGATCAATGG+TGG | 0.634216 | 4.4:+9338531 | MS.gene28376:CDS |
| TGGTGATACGAAGTCTGCGA+GGG | 0.636924 | 4.4:+9341340 | MS.gene28376:CDS |
| AAATGCGATTGAAGCGCACA+TGG | 0.638075 | 4.4:+9338771 | MS.gene28376:CDS |
| AGGTTGGTGAACTTGATGGA+GGG | 0.640702 | 4.4:+9338566 | MS.gene28376:CDS |
| GAAGAAACAAGGGAGGAAGA+GGG | 0.647199 | 4.4:+9338600 | MS.gene28376:CDS |
| TCAACCATAGCGAAGTTGAG+TGG | 0.656028 | 4.4:-9340158 | None:intergenic |
| TCCATCTCTATGATGCTGAA+AGG | 0.665620 | 4.4:+9338934 | MS.gene28376:CDS |
| ACCCTATCCTGTAGCTACTG+CGG | 0.665907 | 4.4:+9340349 | MS.gene28376:CDS |
| ACTTCTATCAAAATTAGCAG+TGG | 0.667566 | 4.4:+9339081 | MS.gene28376:CDS |
| ACCTATTCTAAAATGGCACA+AGG | 0.669082 | 4.4:+9340721 | MS.gene28376:CDS |
| GTGGAGAGTAGAACACAGGT+TGG | 0.678014 | 4.4:+9338550 | MS.gene28376:CDS |
| AGCTTATTGAAAGACCAACA+AGG | 0.679328 | 4.4:+9340657 | MS.gene28376:CDS |
| ATGGTGATACGAAGTCTGCG+AGG | 0.682747 | 4.4:+9341339 | MS.gene28376:CDS |
| ACCATAGCGAAGTTGAGTGG+CGG | 0.682852 | 4.4:-9340155 | None:intergenic |
| CGCGTTCGAAGAAACAAGGG+AGG | 0.688150 | 4.4:+9338593 | MS.gene28376:CDS |
| AATGGTGGAGAGTAGAACAC+AGG | 0.692386 | 4.4:+9338546 | MS.gene28376:CDS |
| AGGCGCGTTCGAAGAAACAA+GGG | 0.709200 | 4.4:+9338590 | MS.gene28376:CDS |
| AACTTCGCTATGGTTGACAA+CGG | 0.716605 | 4.4:+9340164 | MS.gene28376:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATATATTAACAAAATAAA+AGG | - | chr4.4:9340769-9340788 | None:intergenic | 10.0% |
| !! | GTATACAAAAAAAAAATGAA+TGG | + | chr4.4:9339156-9339175 | MS.gene28376:intron | 15.0% |
| !! | TCTAAATATTGTATTTGTAT+AGG | + | chr4.4:9341097-9341116 | MS.gene28376:intron | 15.0% |
| !!! | ACAGTTATTTTTTTTTTTGA+AGG | - | chr4.4:9338342-9338361 | None:intergenic | 15.0% |
| !!! | AGCATAAAAAACTTTAATTT+TGG | - | chr4.4:9339775-9339794 | None:intergenic | 15.0% |
| !!! | TTTCTATATTGTATTTTGTT+TGG | + | chr4.4:9340278-9340297 | MS.gene28376:intron | 15.0% |
| !!! | TTTTAAATCACCAAAATAAA+TGG | - | chr4.4:9338382-9338401 | None:intergenic | 15.0% |
| !! | AACTCCATATTATGAAAATA+AGG | - | chr4.4:9340585-9340604 | None:intergenic | 20.0% |
| !! | ACTCCATATTATGAAAATAA+GGG | - | chr4.4:9340584-9340603 | None:intergenic | 20.0% |
| !! | TGAAATAGTAAACAATCATA+TGG | - | chr4.4:9339913-9339932 | None:intergenic | 20.0% |
| !!! | AACCATTTTTTTTTATAAGC+AGG | - | chr4.4:9339380-9339399 | None:intergenic | 20.0% |
| !!! | AATTTATGCACCATTTATTT+TGG | + | chr4.4:9338369-9338388 | MS.gene28376:intron | 20.0% |
| !!! | TTACCCTTATTTTCATAATA+TGG | + | chr4.4:9340578-9340597 | MS.gene28376:intron | 20.0% |
| !!! | TTGTATAGAATATTTTGTGT+TGG | + | chr4.4:9339398-9339417 | MS.gene28376:intron | 20.0% |
| ! | ACATCTTACAAACTGAAAAT+AGG | - | chr4.4:9341270-9341289 | None:intergenic | 25.0% |
| ! | ACCTAAAAAACTCAATGTTA+AGG | + | chr4.4:9341435-9341454 | MS.gene28376:CDS | 25.0% |
| ! | AGCCTGCTTATAAAAAAAAA+TGG | + | chr4.4:9339375-9339394 | MS.gene28376:intron | 25.0% |
| ! | GAAATTGAATTCTCACATTA+CGG | - | chr4.4:9340255-9340274 | None:intergenic | 25.0% |
| ! | GATAATAAAAATATCAGGAG+AGG | - | chr4.4:9339989-9340008 | None:intergenic | 25.0% |
| ! | GCACAGATAATAAAAATATC+AGG | - | chr4.4:9339994-9340013 | None:intergenic | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | + | chr4.4:9338463-9338482 | MS.gene28376:intron | 25.0% |
| ! | GTCTTATAAGCTAACTTTAT+TGG | + | chr4.4:9338968-9338987 | MS.gene28376:intron | 25.0% |
| ! | GTTTAATGAAGAATTGTTCA+AGG | + | chr4.4:9341176-9341195 | MS.gene28376:CDS | 25.0% |
| ! | TAATAATAACCCAAACTCAA+TGG | - | chr4.4:9341295-9341314 | None:intergenic | 25.0% |
| ! | TCTATAACACAAAGTTGTAT+AGG | + | chr4.4:9338418-9338437 | MS.gene28376:intron | 25.0% |
| ! | TGCATTCAACTTAAGATATT+TGG | + | chr4.4:9339352-9339371 | MS.gene28376:intron | 25.0% |
| ! | TTGCTGATCAATTGAATAAT+AGG | + | chr4.4:9339191-9339210 | MS.gene28376:intron | 25.0% |
| ! | TTGTGCAAAAATAACCAAAA+GGG | - | chr4.4:9338644-9338663 | None:intergenic | 25.0% |
| !! | AATTTGGATGCTTTATTAAC+AGG | + | chr4.4:9339441-9339460 | MS.gene28376:intron | 25.0% |
| !! | ATTGAGTTTGGGTTATTATT+AGG | + | chr4.4:9341294-9341313 | MS.gene28376:intron | 25.0% |
| !! | GTAAACAATCATATGGTTTT+TGG | - | chr4.4:9339906-9339925 | None:intergenic | 25.0% |
| !! | GTTAATAAAGCATCCAAATT+TGG | - | chr4.4:9339441-9339460 | None:intergenic | 25.0% |
| !! | TATTGACATTGGAGAATTTT+AGG | + | chr4.4:9341211-9341230 | MS.gene28376:CDS | 25.0% |
| !! | TTGAGTTTGGGTTATTATTA+GGG | + | chr4.4:9341295-9341314 | MS.gene28376:intron | 25.0% |
| !!! | AACATTGAGTTTTTTAGGTT+AGG | - | chr4.4:9341434-9341453 | None:intergenic | 25.0% |
| !!! | CTATATTGTATTTTGTTTGG+TGG | + | chr4.4:9340281-9340300 | MS.gene28376:intron | 25.0% |
| !!! | TAGAATATTTTGTGTTGGTT+TGG | + | chr4.4:9339403-9339422 | MS.gene28376:intron | 25.0% |
| !!! | TCCTTAACATTGAGTTTTTT+AGG | - | chr4.4:9341439-9341458 | None:intergenic | 25.0% |
| !!! | TGCAGGAATTTTGATAATAT+TGG | + | chr4.4:9339030-9339049 | MS.gene28376:intron | 25.0% |
| !!! | TTTGTGATTTTGATTGCAAA+AGG | + | chr4.4:9338873-9338892 | MS.gene28376:intron | 25.0% |
| AAAGTTGTATAGGTTCTACA+TGG | + | chr4.4:9338428-9338447 | MS.gene28376:intron | 30.0% | |
| AATGAACAGTTGTCAAAGTA+TGG | + | chr4.4:9341320-9341339 | MS.gene28376:CDS | 30.0% | |
| AATTTCCCAAAATAAAGAGC+AGG | + | chr4.4:9340447-9340466 | MS.gene28376:intron | 30.0% | |
| ACTTCTATCAAAATTAGCAG+TGG | + | chr4.4:9339081-9339100 | MS.gene28376:CDS | 30.0% | |
| AGTACAATGTACAACAGAAA+TGG | - | chr4.4:9339579-9339598 | None:intergenic | 30.0% | |
| CTGCAATTAAAAGGATTATG+AGG | - | chr4.4:9340992-9341011 | None:intergenic | 30.0% | |
| CTTGTGCAAAAATAACCAAA+AGG | - | chr4.4:9338645-9338664 | None:intergenic | 30.0% | |
| GAATGCACATGCAATAAAAT+TGG | - | chr4.4:9340820-9340839 | None:intergenic | 30.0% | |
| GAGAGGTAATTATACTACAA+CGG | - | chr4.4:9339948-9339967 | None:intergenic | 30.0% | |
| GCTGATTAGAATACCAAATT+TGG | + | chr4.4:9339425-9339444 | MS.gene28376:intron | 30.0% | |
| GGCTCATTGTTACAATATAT+TGG | + | chr4.4:9339292-9339311 | MS.gene28376:intron | 30.0% | |
| GTATAATTACCTCTCCTTTA+TGG | + | chr4.4:9339953-9339972 | MS.gene28376:intron | 30.0% | |
| GTGCATTCTTTAGATACTTT+GGG | + | chr4.4:9340832-9340851 | MS.gene28376:intron | 30.0% | |
| TCAAACTAAAATTCTGAGCA+TGG | - | chr4.4:9341035-9341054 | None:intergenic | 30.0% | |
| TCTACTGTGTTAAATGTAAC+TGG | + | chr4.4:9339552-9339571 | MS.gene28376:intron | 30.0% | |
| TGAACTTTAACAACCTCTTA+TGG | + | chr4.4:9339271-9339290 | MS.gene28376:intron | 30.0% | |
| TGCAATTTGTCAGGAAATAA+TGG | - | chr4.4:9341407-9341426 | None:intergenic | 30.0% | |
| TGTATTTGTATAGGCATGAT+CGG | + | chr4.4:9341106-9341125 | MS.gene28376:intron | 30.0% | |
| TGTGCATTCTTTAGATACTT+TGG | + | chr4.4:9340831-9340850 | MS.gene28376:intron | 30.0% | |
| TGTTCACAACTGCAATTAAA+AGG | - | chr4.4:9341001-9341020 | None:intergenic | 30.0% | |
| TTAGGAAATTGCAATTTGTC+AGG | - | chr4.4:9341416-9341435 | None:intergenic | 30.0% | |
| ! | AATCAGCACTAAACATCTTT+TGG | - | chr4.4:9338834-9338853 | None:intergenic | 30.0% |
| ! | ACAAGACACCTATTCTAAAA+TGG | + | chr4.4:9340714-9340733 | MS.gene28376:CDS | 30.0% |
| ! | GACTATCAAAGCACTTAAAA+TGG | - | chr4.4:9339637-9339656 | None:intergenic | 30.0% |
| ! | TGACATCTAATTTTTGCATG+TGG | - | chr4.4:9340519-9340538 | None:intergenic | 30.0% |
| ! | TTTTATTGCCATGTATCAGA+AGG | + | chr4.4:9340623-9340642 | MS.gene28376:CDS | 30.0% |
| !! | GGAGAGTTTTTAGATGTTAT+AGG | - | chr4.4:9340799-9340818 | None:intergenic | 30.0% |
| !! | TCAGTTTGTTGAAGTATAAC+TGG | - | chr4.4:9340913-9340932 | None:intergenic | 30.0% |
| !! | TTTGTCAGGAAATAATGGAT+TGG | - | chr4.4:9341402-9341421 | None:intergenic | 30.0% |
| AAAATCTGACAATATCACCC+TGG | - | chr4.4:9340486-9340505 | None:intergenic | 35.0% | |
| AAACTACAGATGCAAATCTC+AGG | - | chr4.4:9340555-9340574 | None:intergenic | 35.0% | |
| AAAGTTGAGGACATAAACTG+AGG | + | chr4.4:9339505-9339524 | MS.gene28376:intron | 35.0% | |
| AACTACAGATGCAAATCTCA+GGG | - | chr4.4:9340554-9340573 | None:intergenic | 35.0% | |
| AAGATGTAGCCATTGAGTTT+GGG | + | chr4.4:9341283-9341302 | MS.gene28376:intron | 35.0% | |
| AATGTGCAGCAAAAATCGAT+TGG | + | chr4.4:9340019-9340038 | MS.gene28376:intron | 35.0% | |
| AGCTTATTGAAAGACCAACA+AGG | + | chr4.4:9340657-9340676 | MS.gene28376:CDS | 35.0% | |
| AGTAGCTAGAATGAAAGTTG+AGG | + | chr4.4:9339492-9339511 | MS.gene28376:intron | 35.0% | |
| GTGAATTGTTGAAGCAGATT+AGG | + | chr4.4:9338695-9338714 | MS.gene28376:CDS | 35.0% | |
| TAAGATGTAGCCATTGAGTT+TGG | + | chr4.4:9341282-9341301 | MS.gene28376:intron | 35.0% | |
| TAAGGACACTCATCAATCAA+AGG | + | chr4.4:9341453-9341472 | MS.gene28376:CDS | 35.0% | |
| TAGTGTATGAAACTGTCGAA+AGG | + | chr4.4:9339796-9339815 | MS.gene28376:intron | 35.0% | |
| TGAACAAAAGGATGGATCAA+TGG | + | chr4.4:9338528-9338547 | MS.gene28376:CDS | 35.0% | |
| TTGTAACAATGAGCCATAAG+AGG | - | chr4.4:9339287-9339306 | None:intergenic | 35.0% | |
| ! | CTTATCCCAATTTTCATCAC+CGG | - | chr4.4:9340690-9340709 | None:intergenic | 35.0% |
| ! | CTTTTTGTAAGTTGCATGCA+TGG | - | chr4.4:9338489-9338508 | None:intergenic | 35.0% |
| ! | GAGTTTTTGAATGTGGCATT+AGG | + | chr4.4:9340371-9340390 | MS.gene28376:CDS | 35.0% |
| ! | GGAATAGAAGTTTTACGTAG+AGG | + | chr4.4:9339212-9339231 | MS.gene28376:intron | 35.0% |
| ! | GGCATTAGGCTTTATCAATT+GGG | + | chr4.4:9340385-9340404 | MS.gene28376:CDS | 35.0% |
| ! | GGGTGATATTGTCAGATTTT+TGG | + | chr4.4:9340486-9340505 | MS.gene28376:intron | 35.0% |
| ! | TAAAGAGTACAGTTGTCACT+CGG | - | chr4.4:9338314-9338333 | None:intergenic | 35.0% |
| ! | TGGCATTAGGCTTTATCAAT+TGG | + | chr4.4:9340384-9340403 | MS.gene28376:CDS | 35.0% |
| !! | ACCTATTCTAAAATGGCACA+AGG | + | chr4.4:9340721-9340740 | MS.gene28376:CDS | 35.0% |
| !! | ATCGATTGGTTTGCAATGAT+TGG | + | chr4.4:9340033-9340052 | MS.gene28376:intron | 35.0% |
| !! | CTTTATCAATTGGGTATCGA+TGG | + | chr4.4:9340394-9340413 | MS.gene28376:CDS | 35.0% |
| !!! | ACCTTGTGCCATTTTAGAAT+AGG | - | chr4.4:9340725-9340744 | None:intergenic | 35.0% |
| !!! | AGTGCTGATTTTGATTGTGT+AGG | + | chr4.4:9338844-9338863 | MS.gene28376:intron | 35.0% |
| !!! | CTTTAGTTTGAACGCAGTTT+TGG | + | chr4.4:9340951-9340970 | MS.gene28376:intron | 35.0% |
| !!! | TAGCTCCTGCTCTTTATTTT+GGG | - | chr4.4:9340455-9340474 | None:intergenic | 35.0% |
| AACTTCGCTATGGTTGACAA+CGG | + | chr4.4:9340164-9340183 | MS.gene28376:CDS | 40.0% | |
| AAGGTATGTTAGCATGGGTT+CGG | + | chr4.4:9339134-9339153 | MS.gene28376:intron | 40.0% | |
| AATCGCACAGCTATTGACAT+TGG | + | chr4.4:9341200-9341219 | MS.gene28376:CDS | 40.0% | |
| ACAAAAGGATGGATCAATGG+TGG | + | chr4.4:9338531-9338550 | MS.gene28376:CDS | 40.0% | |
| ACAATATCACCCTGGTCAAT+TGG | - | chr4.4:9340478-9340497 | None:intergenic | 40.0% | |
| ACCTTTCAGCATCATAGAGA+TGG | - | chr4.4:9338938-9338957 | None:intergenic | 40.0% | |
| AGCTGTAGAGATATGAGTGA+AGG | + | chr4.4:9341134-9341153 | MS.gene28376:intron | 40.0% | |
| CGATTTCATGAATCCGAAGT+TGG | - | chr4.4:9340219-9340238 | None:intergenic | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | + | chr4.4:9338665-9338684 | MS.gene28376:CDS | 40.0% | |
| GAGGTTTCACATGTCCATAA+AGG | - | chr4.4:9339970-9339989 | None:intergenic | 40.0% | |
| TATTGCCATGTATCAGAAGG+AGG | + | chr4.4:9340626-9340645 | MS.gene28376:CDS | 40.0% | |
| TCCATCTCTATGATGCTGAA+AGG | + | chr4.4:9338934-9338953 | MS.gene28376:CDS | 40.0% | |
| TGAAGCCGGTGATGAAAATT+GGG | + | chr4.4:9340682-9340701 | MS.gene28376:CDS | 40.0% | |
| TTCAACTCAGACTCACATCA+TGG | + | chr4.4:9338274-9338293 | MS.gene28376:CDS | 40.0% | |
| TTCACATGTCCATAAAGGAG+AGG | - | chr4.4:9339965-9339984 | None:intergenic | 40.0% | |
| TTGTGTGCTGAACAAAAGGA+TGG | + | chr4.4:9338520-9338539 | MS.gene28376:CDS | 40.0% | |
| ! | GCTGAAAGGTATGTTAGCAT+GGG | + | chr4.4:9339129-9339148 | MS.gene28376:CDS | 40.0% |
| ! | TACTGCGGAGTTTTTGAATG+TGG | + | chr4.4:9340364-9340383 | MS.gene28376:CDS | 40.0% |
| ! | TGCTGAAAGGTATGTTAGCA+TGG | + | chr4.4:9339128-9339147 | MS.gene28376:CDS | 40.0% |
| ! | TGGTTGACAACGGTATTTTC+AGG | + | chr4.4:9340174-9340193 | MS.gene28376:CDS | 40.0% |
| !! | GTAGCTCCTGCTCTTTATTT+TGG | - | chr4.4:9340456-9340475 | None:intergenic | 40.0% |
| AAAAACTCCGCAGTAGCTAC+AGG | - | chr4.4:9340359-9340378 | None:intergenic | 45.0% | |
| AAATGCGATTGAAGCGCACA+TGG | + | chr4.4:9338771-9338790 | MS.gene28376:CDS | 45.0% | |
| AATCCGAAGTTGGCAGAATC+GGG | - | chr4.4:9340209-9340228 | None:intergenic | 45.0% | |
| ACACTCCTCCTTCTGATACA+TGG | - | chr4.4:9340634-9340653 | None:intergenic | 45.0% | |
| ACCTTTCAGCACTACAACTG+AGG | - | chr4.4:9339119-9339138 | None:intergenic | 45.0% | |
| ACTTTGGGCTCTACATGACT+TGG | + | chr4.4:9340847-9340866 | MS.gene28376:intron | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | + | chr4.4:9338617-9338636 | MS.gene28376:CDS | 45.0% | |
| AGGTGATGCATCACAGAGAA+TGG | + | chr4.4:9338735-9338754 | MS.gene28376:CDS | 45.0% | |
| CTGAAGCCGGTGATGAAAAT+TGG | + | chr4.4:9340681-9340700 | MS.gene28376:CDS | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | + | chr4.4:9338600-9338619 | MS.gene28376:CDS | 45.0% | |
| GAATCCGAAGTTGGCAGAAT+CGG | - | chr4.4:9340210-9340229 | None:intergenic | 45.0% | |
| GTATGAAACTGTCGAAAGGC+AGG | + | chr4.4:9339800-9339819 | MS.gene28376:intron | 45.0% | |
| GTATGAATGTACGACTGTGC+AGG | + | chr4.4:9339013-9339032 | MS.gene28376:intron | 45.0% | |
| GTCGTTGTGTGCTGAACAAA+AGG | + | chr4.4:9338516-9338535 | MS.gene28376:CDS | 45.0% | |
| TAGGTTCTACATGGTGCATC+TGG | + | chr4.4:9338437-9338456 | MS.gene28376:intron | 45.0% | |
| TCAACCATAGCGAAGTTGAG+TGG | - | chr4.4:9340161-9340180 | None:intergenic | 45.0% | |
| TTTCCCGATTCTGCCAACTT+CGG | + | chr4.4:9340203-9340222 | MS.gene28376:CDS | 45.0% | |
| ! | AATGGTGGAGAGTAGAACAC+AGG | + | chr4.4:9338546-9338565 | MS.gene28376:CDS | 45.0% |
| ! | AGTTACTTTCTTGCCTCAGG+GGG | + | chr4.4:9338897-9338916 | MS.gene28376:CDS | 45.0% |
| ! | CAGTTACTTTCTTGCCTCAG+GGG | + | chr4.4:9338896-9338915 | MS.gene28376:CDS | 45.0% |
| ! | GCAGTTACTTTCTTGCCTCA+GGG | + | chr4.4:9338895-9338914 | MS.gene28376:CDS | 45.0% |
| ! | TCCTCAGTTGTAGTGCTGAA+AGG | + | chr4.4:9339115-9339134 | MS.gene28376:CDS | 45.0% |
| ! | TGTGGATTTGAGGACCCTTT+TGG | + | chr4.4:9338627-9338646 | MS.gene28376:CDS | 45.0% |
| !! | ACACAGGTTGGTGAACTTGA+TGG | + | chr4.4:9338562-9338581 | MS.gene28376:CDS | 45.0% |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | + | chr4.4:9338715-9338734 | MS.gene28376:CDS | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | + | chr4.4:9338566-9338585 | MS.gene28376:CDS | 45.0% |
| !!! | GACAACGGTATTTTCAGGTC+CGG | + | chr4.4:9340179-9340198 | MS.gene28376:CDS | 45.0% |
| AAGGCGCGTTCGAAGAAACA+AGG | + | chr4.4:9338589-9338608 | MS.gene28376:CDS | 50.0% | |
| ACCATAGCGAAGTTGAGTGG+CGG | - | chr4.4:9340158-9340177 | None:intergenic | 50.0% | |
| ACCCTATCCTGTAGCTACTG+CGG | + | chr4.4:9340349-9340368 | MS.gene28376:CDS | 50.0% | |
| AGGCGCGTTCGAAGAAACAA+GGG | + | chr4.4:9338590-9338609 | MS.gene28376:CDS | 50.0% | |
| ATGGTGATACGAAGTCTGCG+AGG | + | chr4.4:9341339-9341358 | MS.gene28376:CDS | 50.0% | |
| CAGGAGCTACCAATTGACCA+GGG | + | chr4.4:9340466-9340485 | MS.gene28376:intron | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | + | chr4.4:9338599-9338618 | MS.gene28376:CDS | 50.0% | |
| CTCTGTGATGCATCACCTGA+AGG | - | chr4.4:9338733-9338752 | None:intergenic | 50.0% | |
| GAAACTGTCGAAAGGCAGGT+TGG | + | chr4.4:9339804-9339823 | MS.gene28376:intron | 50.0% | |
| GTAGCTACAGGATAGGGTTC+AGG | - | chr4.4:9340347-9340366 | None:intergenic | 50.0% | |
| GTGGAGAGTAGAACACAGGT+TGG | + | chr4.4:9338550-9338569 | MS.gene28376:CDS | 50.0% | |
| GTTGGCAGAATCGGGAAAAC+CGG | - | chr4.4:9340201-9340220 | None:intergenic | 50.0% | |
| TCCGCAGTAGCTACAGGATA+GGG | - | chr4.4:9340353-9340372 | None:intergenic | 50.0% | |
| TGGTGAACTTGATGGAGGGA+AGG | + | chr4.4:9338570-9338589 | MS.gene28376:CDS | 50.0% | |
| TGGTGATACGAAGTCTGCGA+GGG | + | chr4.4:9341340-9341359 | MS.gene28376:CDS | 50.0% | |
| ! | AGACCAACAAGGTCTGAAGC+CGG | + | chr4.4:9340668-9340687 | MS.gene28376:CDS | 50.0% |
| ! | GGCAGTTACTTTCTTGCCTC+AGG | + | chr4.4:9338894-9338913 | MS.gene28376:intron | 50.0% |
| ! | TTGAGCTTGCTCGACTCAAG+TGG | + | chr4.4:9340073-9340092 | MS.gene28376:intron | 50.0% |
| !! | ATTGGGTATCGATGGCTGCA+AGG | + | chr4.4:9340402-9340421 | MS.gene28376:CDS | 50.0% |
| !! | CACATGGTTGGTGCTGGTAA+CGG | + | chr4.4:9338787-9338806 | MS.gene28376:CDS | 50.0% |
| !! | CAGGTTGGTGAACTTGATGG+AGG | + | chr4.4:9338565-9338584 | MS.gene28376:CDS | 50.0% |
| AGGGAGGAAGAGGGATGTTG+TGG | + | chr4.4:9338609-9338628 | MS.gene28376:CDS | 55.0% | |
| CATACAATCTCGTCCCCCTG+AGG | - | chr4.4:9338913-9338932 | None:intergenic | 55.0% | |
| CGCGTTCGAAGAAACAAGGG+AGG | + | chr4.4:9338593-9338612 | MS.gene28376:CDS | 55.0% | |
| CTCCGCAGTAGCTACAGGAT+AGG | - | chr4.4:9340354-9340373 | None:intergenic | 55.0% | |
| GCAGGAGCTACCAATTGACC+AGG | + | chr4.4:9340465-9340484 | MS.gene28376:intron | 55.0% | |
| GCGATTGAAGCGCACATGGT+TGG | + | chr4.4:9338775-9338794 | MS.gene28376:CDS | 55.0% | |
| TGGCGGCACGAATGCTTCAT+CGG | - | chr4.4:9340141-9340160 | None:intergenic | 55.0% | |
| ! | GGGCTCTACATGACTTGGAC+AGG | + | chr4.4:9340852-9340871 | MS.gene28376:intron | 55.0% |
| !! | TCACCGGCTTCAGACCTTGT+TGG | - | chr4.4:9340674-9340693 | None:intergenic | 55.0% |
| GCCGCCACTCAACTTCGCTA+TGG | + | chr4.4:9340154-9340173 | MS.gene28376:CDS | 60.0% | |
| GTCTGCGAGGGCAGTCATGT+TGG | + | chr4.4:9341352-9341371 | MS.gene28376:CDS | 60.0% | |
| ! | GAAGCGCACATGGTTGGTGC+TGG | + | chr4.4:9338781-9338800 | MS.gene28376:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9338261 | 9341478 | 9338261 | ID=MS.gene28376 |
| chr4.4 | mRNA | 9338261 | 9341478 | 9338261 | ID=MS.gene28376.t1;Parent=MS.gene28376 |
| chr4.4 | exon | 9338261 | 9338323 | 9338261 | ID=MS.gene28376.t1.exon1;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9338261 | 9338323 | 9338261 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9338469 | 9338808 | 9338469 | ID=MS.gene28376.t1.exon2;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9338469 | 9338808 | 9338469 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9338895 | 9338955 | 9338895 | ID=MS.gene28376.t1.exon3;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9338895 | 9338955 | 9338895 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9339035 | 9339150 | 9339035 | ID=MS.gene28376.t1.exon4;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9339035 | 9339150 | 9339035 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9340093 | 9340253 | 9340093 | ID=MS.gene28376.t1.exon5;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9340093 | 9340253 | 9340093 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9340335 | 9340437 | 9340335 | ID=MS.gene28376.t1.exon6;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9340335 | 9340437 | 9340335 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9340618 | 9340742 | 9340618 | ID=MS.gene28376.t1.exon7;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9340618 | 9340742 | 9340618 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9341156 | 9341232 | 9341156 | ID=MS.gene28376.t1.exon8;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9341156 | 9341232 | 9341156 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| chr4.4 | exon | 9341316 | 9341478 | 9341316 | ID=MS.gene28376.t1.exon9;Parent=MS.gene28376.t1 |
| chr4.4 | CDS | 9341316 | 9341478 | 9341316 | ID=cds.MS.gene28376.t1;Parent=MS.gene28376.t1 |
| Gene Sequence |
| Protein sequence |
