Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28484.t1 | XP_024642224.1 | 96.8 | 661 | 21 | 0 | 1 | 661 | 1 | 661 | 0.00E+00 | 1353.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28484.t1 | Q9SZL8 | 38.0 | 569 | 339 | 7 | 33 | 593 | 72 | 634 | 3.5e-111 | 404.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28484.t1 | A0A2Z6M8U9 | 78.2 | 657 | 137 | 2 | 1 | 657 | 1 | 651 | 0.0e+00 | 1078.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28484.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28484.t1 | MTR_0856s0010 | 96.875 | 160 | 5 | 0 | 1 | 160 | 1 | 160 | 2.63e-109 | 329 |
| MS.gene28484.t1 | MTR_6g051425 | 35.602 | 191 | 122 | 1 | 104 | 293 | 94 | 284 | 3.84e-34 | 134 |
| MS.gene28484.t1 | MTR_7g115320 | 61.644 | 73 | 25 | 1 | 121 | 193 | 6 | 75 | 1.52e-23 | 95.5 |
| MS.gene28484.t1 | MTR_0558s0020 | 23.162 | 272 | 182 | 5 | 23 | 271 | 29 | 296 | 6.09e-21 | 94.4 |
| MS.gene28484.t1 | MTR_1g070355 | 29.412 | 238 | 148 | 8 | 40 | 265 | 80 | 309 | 3.29e-19 | 92.4 |
| MS.gene28484.t1 | MTR_8g446020 | 24.138 | 261 | 171 | 7 | 13 | 271 | 21 | 256 | 1.11e-18 | 87.0 |
| MS.gene28484.t1 | MTR_1g008290 | 34.328 | 134 | 85 | 1 | 94 | 227 | 14 | 144 | 2.87e-18 | 82.8 |
| MS.gene28484.t1 | MTR_4g035820 | 26.087 | 253 | 173 | 7 | 34 | 275 | 75 | 324 | 5.20e-18 | 89.0 |
| MS.gene28484.t1 | MTR_7g446510 | 30.952 | 168 | 115 | 1 | 117 | 283 | 166 | 333 | 7.96e-18 | 85.9 |
| MS.gene28484.t1 | MTR_7g446060 | 41.573 | 89 | 50 | 1 | 109 | 197 | 1 | 87 | 1.75e-17 | 80.1 |
| MS.gene28484.t1 | MTR_7g446480 | 30.952 | 168 | 115 | 1 | 117 | 283 | 151 | 318 | 1.76e-17 | 84.7 |
| MS.gene28484.t1 | MTR_6g022070 | 30.405 | 148 | 95 | 2 | 325 | 470 | 1 | 142 | 1.76e-15 | 79.0 |
| MS.gene28484.t1 | MTR_1g083640 | 23.770 | 244 | 157 | 6 | 23 | 242 | 44 | 282 | 1.63e-14 | 75.1 |
| MS.gene28484.t1 | MTR_6g090505 | 24.865 | 185 | 137 | 2 | 88 | 270 | 46 | 230 | 2.81e-14 | 75.5 |
| MS.gene28484.t1 | MTR_7g446520 | 24.473 | 237 | 161 | 3 | 40 | 273 | 94 | 315 | 3.76e-14 | 74.7 |
| MS.gene28484.t1 | MTR_3g012160 | 37.037 | 81 | 50 | 1 | 180 | 260 | 14 | 93 | 8.75e-12 | 62.4 |
| MS.gene28484.t1 | MTR_7g074790 | 24.852 | 169 | 106 | 3 | 32 | 197 | 8 | 158 | 3.65e-11 | 64.3 |
| MS.gene28484.t1 | MTR_5g039760 | 26.531 | 196 | 118 | 4 | 32 | 224 | 8 | 180 | 3.71e-11 | 63.2 |
| MS.gene28484.t1 | MTR_1g013060 | 21.586 | 227 | 168 | 4 | 14 | 231 | 4 | 229 | 7.56e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28484.t1 | AT4G15090 | 32.411 | 759 | 470 | 12 | 8 | 748 | 21 | 754 | 8.87e-127 | 398 |
| MS.gene28484.t1 | AT4G15090 | 32.411 | 759 | 470 | 12 | 8 | 748 | 21 | 754 | 8.87e-127 | 398 |
| MS.gene28484.t1 | AT4G15090 | 32.411 | 759 | 470 | 12 | 8 | 748 | 21 | 754 | 8.87e-127 | 398 |
| MS.gene28484.t1 | AT4G15090 | 32.411 | 759 | 470 | 12 | 8 | 748 | 21 | 754 | 8.87e-127 | 398 |
| MS.gene28484.t1 | AT4G15090 | 32.411 | 759 | 470 | 12 | 8 | 748 | 21 | 754 | 8.87e-127 | 398 |
| MS.gene28484.t1 | AT4G38180 | 37.209 | 602 | 363 | 8 | 1 | 593 | 39 | 634 | 1.13e-126 | 397 |
| MS.gene28484.t1 | AT1G52520 | 33.603 | 619 | 391 | 11 | 34 | 645 | 85 | 690 | 4.77e-112 | 356 |
| MS.gene28484.t1 | AT3G22170 | 32.822 | 652 | 377 | 10 | 8 | 630 | 32 | 651 | 7.79e-108 | 348 |
| MS.gene28484.t1 | AT3G22170 | 32.822 | 652 | 377 | 10 | 8 | 630 | 32 | 651 | 7.79e-108 | 348 |
| MS.gene28484.t1 | AT1G76320 | 33.049 | 587 | 370 | 9 | 38 | 620 | 1 | 568 | 2.18e-106 | 340 |
| MS.gene28484.t1 | AT1G76320 | 33.049 | 587 | 370 | 9 | 38 | 620 | 1 | 568 | 4.97e-106 | 341 |
| MS.gene28484.t1 | AT1G76320 | 33.049 | 587 | 370 | 9 | 38 | 620 | 1 | 568 | 5.27e-106 | 341 |
| MS.gene28484.t1 | AT1G76320 | 33.049 | 587 | 370 | 9 | 38 | 620 | 1 | 568 | 5.27e-106 | 341 |
| MS.gene28484.t1 | AT2G27110 | 32.955 | 616 | 371 | 13 | 21 | 630 | 36 | 615 | 3.77e-99 | 325 |
| MS.gene28484.t1 | AT2G27110 | 32.955 | 616 | 371 | 13 | 21 | 630 | 36 | 615 | 3.77e-99 | 325 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 1.27e-95 | 314 |
| MS.gene28484.t1 | AT1G80010 | 31.605 | 598 | 390 | 9 | 14 | 597 | 73 | 665 | 2.07e-95 | 312 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 2.78e-95 | 314 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 2.78e-95 | 314 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 3.05e-95 | 314 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 3.05e-95 | 314 |
| MS.gene28484.t1 | AT2G32250 | 31.731 | 624 | 375 | 8 | 24 | 645 | 28 | 602 | 3.05e-95 | 314 |
| MS.gene28484.t1 | AT2G32250 | 31.803 | 610 | 365 | 8 | 38 | 645 | 1 | 561 | 1.13e-94 | 311 |
| MS.gene28484.t1 | AT2G32250 | 31.803 | 610 | 365 | 8 | 38 | 645 | 1 | 561 | 1.50e-94 | 311 |
| MS.gene28484.t1 | AT2G27110 | 36.726 | 452 | 269 | 8 | 184 | 630 | 31 | 470 | 2.44e-91 | 301 |
| MS.gene28484.t1 | AT3G06250 | 32.740 | 562 | 327 | 13 | 33 | 591 | 189 | 702 | 1.13e-88 | 295 |
| MS.gene28484.t1 | AT3G06250 | 32.740 | 562 | 327 | 13 | 33 | 591 | 189 | 702 | 1.13e-88 | 295 |
| MS.gene28484.t1 | AT3G06250 | 32.740 | 562 | 327 | 13 | 33 | 591 | 189 | 702 | 1.13e-88 | 295 |
| MS.gene28484.t1 | AT5G18960 | 32.801 | 564 | 327 | 15 | 33 | 591 | 210 | 726 | 8.14e-85 | 286 |
| MS.gene28484.t1 | AT5G18960 | 32.801 | 564 | 327 | 15 | 33 | 591 | 210 | 726 | 8.14e-85 | 286 |
| MS.gene28484.t1 | AT4G38170 | 36.548 | 394 | 235 | 7 | 208 | 597 | 21 | 403 | 2.94e-81 | 270 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 27 | 583 | 5.62e-81 | 274 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 27 | 583 | 5.62e-81 | 274 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 27 | 583 | 1.25e-80 | 273 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 41 | 597 | 1.25e-80 | 274 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 27 | 583 | 1.55e-80 | 274 |
| MS.gene28484.t1 | AT4G19990 | 30.268 | 598 | 358 | 12 | 40 | 619 | 27 | 583 | 1.55e-80 | 274 |
| MS.gene28484.t1 | AT4G19990 | 31.107 | 524 | 318 | 8 | 98 | 619 | 44 | 526 | 5.46e-78 | 265 |
| MS.gene28484.t1 | AT1G10240 | 27.526 | 574 | 382 | 12 | 34 | 590 | 48 | 604 | 4.68e-62 | 221 |
| MS.gene28484.t1 | AT1G10240 | 27.526 | 574 | 382 | 12 | 34 | 590 | 48 | 604 | 4.68e-62 | 221 |
| MS.gene28484.t1 | AT5G28530 | 27.018 | 607 | 400 | 14 | 9 | 590 | 30 | 618 | 1.76e-59 | 214 |
| MS.gene28484.t1 | AT5G28530 | 26.689 | 607 | 398 | 14 | 9 | 590 | 30 | 614 | 1.36e-58 | 211 |
| MS.gene28484.t1 | AT5G28530 | 26.689 | 607 | 398 | 14 | 9 | 590 | 30 | 614 | 1.36e-58 | 211 |
| MS.gene28484.t1 | AT5G28530 | 24.582 | 598 | 363 | 20 | 9 | 590 | 30 | 555 | 1.22e-31 | 131 |
| MS.gene28484.t1 | AT5G28530 | 24.247 | 598 | 361 | 20 | 9 | 590 | 30 | 551 | 1.05e-30 | 128 |
Find 120 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTTCATAGAAGAAATT+TGG | 0.144552 | 8.4:-28596168 | None:intergenic |
| CTCACATCTCTTTCATTAAA+TGG | 0.147918 | 8.4:-28596054 | None:intergenic |
| AGGGCTGCTTATGAGTATTT+TGG | 0.200825 | 8.4:+28596243 | MS.gene28484:CDS |
| CTCGCCACAGGTGGTGTTTA+TGG | 0.205906 | 8.4:+28596517 | MS.gene28484:CDS |
| TGTATAACGAACGTCATAAA+TGG | 0.226594 | 8.4:+28596712 | MS.gene28484:CDS |
| TTCATGTAAGGAATGTCTTT+TGG | 0.251842 | 8.4:+28596205 | MS.gene28484:CDS |
| GTATACTCATGCTAAATTTA+AGG | 0.258580 | 8.4:+28596977 | MS.gene28484:CDS |
| TCCTCTGCCATCACTCTGTT+TGG | 0.267068 | 8.4:-28597633 | None:intergenic |
| CTCTGTTTGGGTCGTTTACT+TGG | 0.269797 | 8.4:-28597620 | None:intergenic |
| TGCTCATTGTTTGAATTTAG+AGG | 0.299376 | 8.4:+28597170 | MS.gene28484:CDS |
| CTTGGATGTGGGTTGCTATC+AGG | 0.301907 | 8.4:+28596363 | MS.gene28484:CDS |
| TTTCTTCTATGAAATAGATT+TGG | 0.305934 | 8.4:+28596173 | MS.gene28484:CDS |
| AGTATACACGCTTTCTTTGA+TGG | 0.331302 | 8.4:+28596795 | MS.gene28484:CDS |
| TTGAACAACCTTGCCTTTGT+AGG | 0.343323 | 8.4:-28595910 | None:intergenic |
| TGAATTTCAGTACCATTGTT+TGG | 0.350297 | 8.4:-28597518 | None:intergenic |
| GCGGGTATGGTGATTATAAA+AGG | 0.352027 | 8.4:+28596571 | MS.gene28484:CDS |
| GTTCAAGGCTAACAAGAATA+TGG | 0.357986 | 8.4:+28595927 | MS.gene28484:CDS |
| TTGAGCTTCAACAAAATCAT+TGG | 0.360559 | 8.4:+28596679 | MS.gene28484:CDS |
| CATGGTCAATCAACATTACT+TGG | 0.375579 | 8.4:+28596345 | MS.gene28484:CDS |
| TGTTGGAGGATGTGTTAGTT+GGG | 0.379335 | 8.4:+28597081 | MS.gene28484:CDS |
| ATTTGTCACTCTTTGAGAAT+TGG | 0.383910 | 8.4:-28597752 | None:intergenic |
| CAAACTGATGTAAAATTTCA+TGG | 0.386961 | 8.4:-28597427 | None:intergenic |
| CCTCTGCCATCACTCTGTTT+GGG | 0.390417 | 8.4:-28597632 | None:intergenic |
| CAACAAAATCATTGGTTGAC+TGG | 0.393166 | 8.4:+28596687 | MS.gene28484:CDS |
| TTGTCAAACCTATCCATTTG+TGG | 0.404915 | 8.4:-28597338 | None:intergenic |
| TGAAATTCACAGTCCATTGC+GGG | 0.405577 | 8.4:+28597532 | MS.gene28484:CDS |
| CACCACCTGTGGCGAGTTGT+AGG | 0.411093 | 8.4:-28596510 | None:intergenic |
| TGAATACCACAATTTCTTGC+GGG | 0.415845 | 8.4:+28596919 | MS.gene28484:CDS |
| AACAAGGAACGACGTGCAAT+TGG | 0.416589 | 8.4:+28596087 | MS.gene28484:CDS |
| TAGAGAATATGCTTTGAGAA+AGG | 0.418901 | 8.4:+28595660 | MS.gene28484:CDS |
| CAATCTCTTGTTAAAGATGC+AGG | 0.422205 | 8.4:+28596015 | MS.gene28484:CDS |
| CCACAATCCACAAAAGCATT+TGG | 0.424359 | 8.4:-28595520 | None:intergenic |
| TGGTCAGTCACAATACCAAC+AGG | 0.431128 | 8.4:-28596450 | None:intergenic |
| AGAGAATATGCTTTGAGAAA+GGG | 0.433857 | 8.4:+28595661 | MS.gene28484:CDS |
| TGAACAACCTTGCCTTTGTA+GGG | 0.436560 | 8.4:-28595909 | None:intergenic |
| CAACCTTGCCTTTGTAGGGC+TGG | 0.439468 | 8.4:-28595905 | None:intergenic |
| ACATCGAGAAAAGGAAATGA+TGG | 0.450797 | 8.4:+28595703 | MS.gene28484:CDS |
| AGCATTCACAACTGAGATCA+TGG | 0.451279 | 8.4:-28597151 | None:intergenic |
| TCATGGCTTCGTTGTATGCT+AGG | 0.452469 | 8.4:+28596420 | MS.gene28484:CDS |
| CTGGTATGATGAGAATGATT+AGG | 0.463235 | 8.4:-28595886 | None:intergenic |
| CAATCAACATTACTTGGATG+TGG | 0.465576 | 8.4:+28596351 | MS.gene28484:CDS |
| TACAAAGGCAAGGTTGTTCA+AGG | 0.468300 | 8.4:+28595912 | MS.gene28484:CDS |
| CTAGCTAAAACATACTTCTC+TGG | 0.469006 | 8.4:-28597248 | None:intergenic |
| GTATAACGAACGTCATAAAT+GGG | 0.470238 | 8.4:+28596713 | MS.gene28484:CDS |
| GTGTTGGAGGATGTGTTAGT+TGG | 0.477649 | 8.4:+28597080 | MS.gene28484:CDS |
| CCTTTACGTTTAACCCGCAA+TGG | 0.484773 | 8.4:-28597545 | None:intergenic |
| TTTGGGCTGATGCAAGAAGT+AGG | 0.488323 | 8.4:+28596223 | MS.gene28484:CDS |
| AACTTGATACAAATCTTAGC+AGG | 0.490559 | 8.4:-28595826 | None:intergenic |
| AGAGTTTGAAGACACATCTA+AGG | 0.494136 | 8.4:+28597400 | MS.gene28484:CDS |
| TCTTGCATGCACAAGAGATC+GGG | 0.495635 | 8.4:+28595744 | MS.gene28484:CDS |
| TTCTTGCATGCACAAGAGAT+CGG | 0.498229 | 8.4:+28595743 | MS.gene28484:CDS |
| AAGACAAAGAGTCATTTGTA+TGG | 0.499454 | 8.4:+28596388 | MS.gene28484:CDS |
| GACACAATTGAAGCCACAAA+TGG | 0.499877 | 8.4:+28597325 | MS.gene28484:CDS |
| AAGATTAGAACATCGAGAAA+AGG | 0.501177 | 8.4:+28595694 | MS.gene28484:CDS |
| TGTATCAAGTTGAAAGCAGA+TGG | 0.504773 | 8.4:+28595838 | MS.gene28484:CDS |
| TTGAAGACACGTCCAACAAT+GGG | 0.506967 | 8.4:+28595793 | MS.gene28484:CDS |
| ATTCAAATCAATGATGATGC+AGG | 0.511726 | 8.4:+28595970 | MS.gene28484:CDS |
| CTTTGCCACGTATCATGTGT+TGG | 0.521460 | 8.4:+28597064 | MS.gene28484:CDS |
| CGACGTGCAATTGGAAAAGA+AGG | 0.525049 | 8.4:+28596096 | MS.gene28484:CDS |
| TCGTTGAGTTGTTGACATAC+CGG | 0.542230 | 8.4:-28596766 | None:intergenic |
| TTGGGCTGATGCAAGAAGTA+GGG | 0.542282 | 8.4:+28596224 | MS.gene28484:CDS |
| CATCGAGAAAAGGAAATGAT+GGG | 0.554779 | 8.4:+28595704 | MS.gene28484:CDS |
| ACCACCTGTGGCGAGTTGTA+GGG | 0.557062 | 8.4:-28596509 | None:intergenic |
| AATTGAAGCCACAAATGGAT+AGG | 0.557924 | 8.4:+28597330 | MS.gene28484:CDS |
| TGTGGTAGTATTCATGATGA+AGG | 0.558676 | 8.4:+28595538 | MS.gene28484:CDS |
| CCATTGCGGGTTAAACGTAA+AGG | 0.562059 | 8.4:+28597545 | MS.gene28484:CDS |
| AATGTTAAAAGAAGTTTCAA+CGG | 0.562597 | 8.4:+28597485 | MS.gene28484:CDS |
| ATTGAAGACACGTCCAACAA+TGG | 0.565861 | 8.4:+28595792 | MS.gene28484:CDS |
| TGCTTATTCATTGAACATTG+TGG | 0.568649 | 8.4:+28597034 | MS.gene28484:CDS |
| GTTTGACCCGCAAGAAATTG+TGG | 0.569261 | 8.4:-28596925 | None:intergenic |
| TAGCATGAGTATACTCACCT+TGG | 0.569281 | 8.4:-28596968 | None:intergenic |
| TTCAGTTGTAGCATTCCTGG+TGG | 0.569900 | 8.4:-28597462 | None:intergenic |
| CTGAAATTCACAGTCCATTG+CGG | 0.572293 | 8.4:+28597531 | MS.gene28484:CDS |
| TATTGTGACTGACCAATGTA+AGG | 0.579574 | 8.4:+28596458 | MS.gene28484:CDS |
| AATCAACATTACTTGGATGT+GGG | 0.580091 | 8.4:+28596352 | MS.gene28484:CDS |
| ATGAATACCACAATTTCTTG+CGG | 0.580755 | 8.4:+28596918 | MS.gene28484:CDS |
| TTATTCATTGAACATTGTGG+AGG | 0.587304 | 8.4:+28597037 | MS.gene28484:CDS |
| TCAATTGAAAAGCAATTCCA+AGG | 0.592270 | 8.4:+28596951 | MS.gene28484:CDS |
| AGTTGAAAGCAGATGGATTG+TGG | 0.593315 | 8.4:+28595845 | MS.gene28484:CDS |
| TGGAAAAGAAGGTGATGGCA+AGG | 0.598389 | 8.4:+28596107 | MS.gene28484:CDS |
| ATGTTGAAAATGAAGATACA+TGG | 0.603276 | 8.4:+28595581 | MS.gene28484:CDS |
| TCCCTACAACTCGCCACAGG+TGG | 0.604512 | 8.4:+28596508 | MS.gene28484:CDS |
| CCATCTGTTGATGTTGTAAG+TGG | 0.606167 | 8.4:+28597802 | MS.gene28484:CDS |
| TATGTGTGTGTGCTCAAGAG+AGG | 0.608439 | 8.4:+28597213 | MS.gene28484:CDS |
| GGCAATGCAAAATGCAATCG+AGG | 0.608997 | 8.4:+28596479 | MS.gene28484:CDS |
| GCAATTGGAAAAGAAGGTGA+TGG | 0.609009 | 8.4:+28596102 | MS.gene28484:CDS |
| CTACGAGGTTGCTGAAGTAG+CGG | 0.610192 | 8.4:+28597376 | MS.gene28484:CDS |
| TCATCATACCAGCCCTACAA+AGG | 0.614008 | 8.4:+28595897 | MS.gene28484:CDS |
| TATTCATTGAACATTGTGGA+GGG | 0.614896 | 8.4:+28597038 | MS.gene28484:CDS |
| TTGCTTCTGATTTACCCACC+AGG | 0.625219 | 8.4:+28597447 | MS.gene28484:CDS |
| GTTGGAGGATGTGTTAGTTG+GGG | 0.625659 | 8.4:+28597082 | MS.gene28484:CDS |
| TACTCATGCTAAATTTAAGG+AGG | 0.627353 | 8.4:+28596980 | MS.gene28484:CDS |
| CTCTTGTTAAAGATGCAGGC+GGG | 0.627598 | 8.4:+28596019 | MS.gene28484:CDS |
| TCTGTTGATGTTGTAAGTGG+TGG | 0.628755 | 8.4:+28597805 | MS.gene28484:CDS |
| TTTGTTGGTGTGAATCACCA+TGG | 0.635015 | 8.4:+28596327 | MS.gene28484:CDS |
| AAACGACCCAAACAGAGTGA+TGG | 0.635641 | 8.4:+28597626 | MS.gene28484:CDS |
| CTTGCTAGATGCAAGTACAA+TGG | 0.637072 | 8.4:+28597831 | MS.gene28484:CDS |
| TCAGTTGTAGCATTCCTGGT+GGG | 0.641081 | 8.4:-28597461 | None:intergenic |
| CCACTTACAACATCAACAGA+TGG | 0.643034 | 8.4:-28597802 | None:intergenic |
| TGCCACGTATCATGTGTTGG+AGG | 0.643327 | 8.4:+28597067 | MS.gene28484:CDS |
| TGTGAGGAATTATGTTAACA+AGG | 0.648059 | 8.4:+28596071 | MS.gene28484:CDS |
| ATCGAGAAAAGGAAATGATG+GGG | 0.649742 | 8.4:+28595705 | MS.gene28484:CDS |
| TCTCTTGTTAAAGATGCAGG+CGG | 0.654412 | 8.4:+28596018 | MS.gene28484:CDS |
| ATGTGTGTGTGCTCAAGAGA+GGG | 0.656799 | 8.4:+28597214 | MS.gene28484:CDS |
| TTGAAAATGAAGATACATGG+TGG | 0.661586 | 8.4:+28595584 | MS.gene28484:CDS |
| ATACCAGCCCTACAAAGGCA+AGG | 0.665308 | 8.4:+28595902 | MS.gene28484:CDS |
| CAAGTAATGTTGATTGACCA+TGG | 0.665568 | 8.4:-28596344 | None:intergenic |
| CCCAAACAGAGTGATGGCAG+AGG | 0.668001 | 8.4:+28597632 | MS.gene28484:CDS |
| TGAAAATGAAGATACATGGT+GGG | 0.685627 | 8.4:+28595585 | MS.gene28484:CDS |
| GAGAAAAGGAAATGATGGGG+AGG | 0.686066 | 8.4:+28595708 | MS.gene28484:CDS |
| GGTCAGTCACAATACCAACA+GGG | 0.687173 | 8.4:-28596449 | None:intergenic |
| TATGCCATAAACACCACCTG+TGG | 0.687731 | 8.4:-28596521 | None:intergenic |
| GGTGACTCAAATCCAAACAA+TGG | 0.688893 | 8.4:+28597506 | MS.gene28484:CDS |
| ATCCTCCAACACATGATACG+TGG | 0.692407 | 8.4:-28597069 | None:intergenic |
| GTCAGTCACAATACCAACAG+GGG | 0.694377 | 8.4:-28596448 | None:intergenic |
| GTTATGCAAGCATTTCTACG+AGG | 0.708830 | 8.4:+28597361 | MS.gene28484:CDS |
| TCAATGATGATGCAGGTGTG+AGG | 0.717261 | 8.4:+28595977 | MS.gene28484:CDS |
| CATTTAATGAAAGAGATGTG+AGG | 0.724148 | 8.4:+28596055 | MS.gene28484:CDS |
| ACTGATGTAAAATTTCATGG+AGG | 0.730170 | 8.4:-28597424 | None:intergenic |
| TCAGTCACAATACCAACAGG+GGG | 0.734277 | 8.4:-28596447 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGGAATAAAAATATTAAA+AGG | + | chr8.4:28597270-28597289 | MS.gene28484:CDS | 15.0% |
| !!! | CTTCTTAAGAAAATATTTTT+GGG | + | chr8.4:28596743-28596762 | MS.gene28484:CDS | 15.0% |
| !! | AATGTTAAAAGAAGTTTCAA+CGG | + | chr8.4:28597485-28597504 | MS.gene28484:CDS | 20.0% |
| !! | ATACAATATCCATATATACA+TGG | - | chr8.4:28597699-28597718 | None:intergenic | 20.0% |
| !! | TCTATTTCATAGAAGAAATT+TGG | - | chr8.4:28596171-28596190 | None:intergenic | 20.0% |
| !! | TTGACAAAAATAGTTTATCA+AGG | - | chr8.4:28596133-28596152 | None:intergenic | 20.0% |
| !! | TTTCTTCTATGAAATAGATT+TGG | + | chr8.4:28596173-28596192 | MS.gene28484:CDS | 20.0% |
| !!! | AAACTATTTTTGTCAAATGA+GGG | + | chr8.4:28596137-28596156 | MS.gene28484:CDS | 20.0% |
| !!! | AAATATTTTCTTAAGAAGGT+TGG | - | chr8.4:28596741-28596760 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTAAGA+AGG | - | chr8.4:28596745-28596764 | None:intergenic | 20.0% |
| !!! | CCTTCTTAAGAAAATATTTT+TGG | + | chr8.4:28596742-28596761 | MS.gene28484:CDS | 20.0% |
| !!! | TAAACTATTTTTGTCAAATG+AGG | + | chr8.4:28596136-28596155 | MS.gene28484:CDS | 20.0% |
| ! | ATGTTGAAAATGAAGATACA+TGG | + | chr8.4:28595581-28595600 | MS.gene28484:CDS | 25.0% |
| ! | CAAACTGATGTAAAATTTCA+TGG | - | chr8.4:28597430-28597449 | None:intergenic | 25.0% |
| ! | GTATACTCATGCTAAATTTA+AGG | + | chr8.4:28596977-28596996 | MS.gene28484:CDS | 25.0% |
| ! | TTGTAATCACCATGTATATA+TGG | + | chr8.4:28597687-28597706 | MS.gene28484:intron | 25.0% |
| !! | ACATTTTTCTTTTTGATGGA+GGG | - | chr8.4:28597574-28597593 | None:intergenic | 25.0% |
| !! | GAAAAACACATATCTGTTTT+AGG | - | chr8.4:28595613-28595632 | None:intergenic | 25.0% |
| !!! | AAGCTCAAATTTTTCAATGA+AGG | - | chr8.4:28596667-28596686 | None:intergenic | 25.0% |
| !!! | AATTTAGAGGTATTTTGTGT+CGG | + | chr8.4:28597183-28597202 | MS.gene28484:CDS | 25.0% |
| !!! | TAGATGATTTTGAAGAGAAA+TGG | + | chr8.4:28596637-28596656 | MS.gene28484:CDS | 25.0% |
| !!! | TTAAGAAAATATTTTTGGGC+CGG | + | chr8.4:28596747-28596766 | MS.gene28484:CDS | 25.0% |
| !!! | TTGTATGGCTTTTTAATTCA+TGG | + | chr8.4:28596403-28596422 | MS.gene28484:CDS | 25.0% |
| AACTTGATACAAATCTTAGC+AGG | - | chr8.4:28595829-28595848 | None:intergenic | 30.0% | |
| AAGACAAAGAGTCATTTGTA+TGG | + | chr8.4:28596388-28596407 | MS.gene28484:CDS | 30.0% | |
| AAGATTAGAACATCGAGAAA+AGG | + | chr8.4:28595694-28595713 | MS.gene28484:CDS | 30.0% | |
| AATCAACATTACTTGGATGT+GGG | + | chr8.4:28596352-28596371 | MS.gene28484:CDS | 30.0% | |
| ACTGATGTAAAATTTCATGG+AGG | - | chr8.4:28597427-28597446 | None:intergenic | 30.0% | |
| ATGAATACCACAATTTCTTG+CGG | + | chr8.4:28596918-28596937 | MS.gene28484:CDS | 30.0% | |
| CATTTAATGAAAGAGATGTG+AGG | + | chr8.4:28596055-28596074 | MS.gene28484:CDS | 30.0% | |
| CTCACATCTCTTTCATTAAA+TGG | - | chr8.4:28596057-28596076 | None:intergenic | 30.0% | |
| GTATAACGAACGTCATAAAT+GGG | + | chr8.4:28596713-28596732 | MS.gene28484:CDS | 30.0% | |
| TACTCATGCTAAATTTAAGG+AGG | + | chr8.4:28596980-28596999 | MS.gene28484:CDS | 30.0% | |
| TATTCATTGAACATTGTGGA+GGG | + | chr8.4:28597038-28597057 | MS.gene28484:CDS | 30.0% | |
| TCAATTGAAAAGCAATTCCA+AGG | + | chr8.4:28596951-28596970 | MS.gene28484:CDS | 30.0% | |
| TGAAAATGAAGATACATGGT+GGG | + | chr8.4:28595585-28595604 | MS.gene28484:CDS | 30.0% | |
| TGAATTTCAGTACCATTGTT+TGG | - | chr8.4:28597521-28597540 | None:intergenic | 30.0% | |
| TGCTCATTGTTTGAATTTAG+AGG | + | chr8.4:28597170-28597189 | MS.gene28484:CDS | 30.0% | |
| TGCTTATTCATTGAACATTG+TGG | + | chr8.4:28597034-28597053 | MS.gene28484:CDS | 30.0% | |
| TGTATAACGAACGTCATAAA+TGG | + | chr8.4:28596712-28596731 | MS.gene28484:CDS | 30.0% | |
| TGTGAGGAATTATGTTAACA+AGG | + | chr8.4:28596071-28596090 | MS.gene28484:CDS | 30.0% | |
| TTATTCATTGAACATTGTGG+AGG | + | chr8.4:28597037-28597056 | MS.gene28484:CDS | 30.0% | |
| TTCTGTTTGTCCAAATTTGT+AGG | + | chr8.4:28597726-28597745 | MS.gene28484:intron | 30.0% | |
| TTGAAAATGAAGATACATGG+TGG | + | chr8.4:28595584-28595603 | MS.gene28484:CDS | 30.0% | |
| TTGAGCTTCAACAAAATCAT+TGG | + | chr8.4:28596679-28596698 | MS.gene28484:CDS | 30.0% | |
| ! | ATTCAAATCAATGATGATGC+AGG | + | chr8.4:28595970-28595989 | MS.gene28484:CDS | 30.0% |
| ! | ATTTGTCACTCTTTGAGAAT+TGG | - | chr8.4:28597755-28597774 | None:intergenic | 30.0% |
| ! | GACATTTTTCTTTTTGATGG+AGG | - | chr8.4:28597575-28597594 | None:intergenic | 30.0% |
| ! | GCAGACATTTTTCTTTTTGA+TGG | - | chr8.4:28597578-28597597 | None:intergenic | 30.0% |
| ! | TCATGTAAGGAATGTCTTTT+GGG | + | chr8.4:28596206-28596225 | MS.gene28484:CDS | 30.0% |
| ! | TTCATGTAAGGAATGTCTTT+TGG | + | chr8.4:28596205-28596224 | MS.gene28484:CDS | 30.0% |
| !! | AGAGAATATGCTTTGAGAAA+GGG | + | chr8.4:28595661-28595680 | MS.gene28484:CDS | 30.0% |
| !! | TAGAGAATATGCTTTGAGAA+AGG | + | chr8.4:28595660-28595679 | MS.gene28484:CDS | 30.0% |
| !!! | AGAAGTATGTTTTAGCTAGA+TGG | + | chr8.4:28597252-28597271 | MS.gene28484:CDS | 30.0% |
| AAAATTGCCGAAAAACTCAG+CGG | + | chr8.4:28596552-28596571 | MS.gene28484:CDS | 35.0% | |
| AATTGAAGCCACAAATGGAT+AGG | + | chr8.4:28597330-28597349 | MS.gene28484:CDS | 35.0% | |
| ACACCAACAAAAACAGCAAA+AGG | - | chr8.4:28596318-28596337 | None:intergenic | 35.0% | |
| ACATCGAGAAAAGGAAATGA+TGG | + | chr8.4:28595703-28595722 | MS.gene28484:CDS | 35.0% | |
| AGAGTTTGAAGACACATCTA+AGG | + | chr8.4:28597400-28597419 | MS.gene28484:CDS | 35.0% | |
| AGTATACACGCTTTCTTTGA+TGG | + | chr8.4:28596795-28596814 | MS.gene28484:CDS | 35.0% | |
| ATCGAGAAAAGGAAATGATG+GGG | + | chr8.4:28595705-28595724 | MS.gene28484:CDS | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | + | chr8.4:28596351-28596370 | MS.gene28484:CDS | 35.0% | |
| CAATCTCTTGTTAAAGATGC+AGG | + | chr8.4:28596015-28596034 | MS.gene28484:CDS | 35.0% | |
| CATCGAGAAAAGGAAATGAT+GGG | + | chr8.4:28595704-28595723 | MS.gene28484:CDS | 35.0% | |
| CATGGTCAATCAACATTACT+TGG | + | chr8.4:28596345-28596364 | MS.gene28484:CDS | 35.0% | |
| CTAGCTAAAACATACTTCTC+TGG | - | chr8.4:28597251-28597270 | None:intergenic | 35.0% | |
| CTGGTATGATGAGAATGATT+AGG | - | chr8.4:28595889-28595908 | None:intergenic | 35.0% | |
| GTTCAAGGCTAACAAGAATA+TGG | + | chr8.4:28595927-28595946 | MS.gene28484:CDS | 35.0% | |
| TATTGTGACTGACCAATGTA+AGG | + | chr8.4:28596458-28596477 | MS.gene28484:CDS | 35.0% | |
| TGAATACCACAATTTCTTGC+GGG | + | chr8.4:28596919-28596938 | MS.gene28484:CDS | 35.0% | |
| TGTGGTAGTATTCATGATGA+AGG | + | chr8.4:28595538-28595557 | MS.gene28484:CDS | 35.0% | |
| TTGTCAAACCTATCCATTTG+TGG | - | chr8.4:28597341-28597360 | None:intergenic | 35.0% | |
| ! | ATTCTTTTTCTGCTCGACTT+CGG | - | chr8.4:28596878-28596897 | None:intergenic | 35.0% |
| ! | ATTTTCAGTTGTAGCATTCC+TGG | - | chr8.4:28597468-28597487 | None:intergenic | 35.0% |
| ! | CAACAAAATCATTGGTTGAC+TGG | + | chr8.4:28596687-28596706 | MS.gene28484:CDS | 35.0% |
| ! | CAAGTAATGTTGATTGACCA+TGG | - | chr8.4:28596347-28596366 | None:intergenic | 35.0% |
| ! | CATTTTGCATTGCCTTACAT+TGG | - | chr8.4:28596473-28596492 | None:intergenic | 35.0% |
| ! | GAATTGGTGTCCTACAAATT+TGG | - | chr8.4:28597739-28597758 | None:intergenic | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | + | chr8.4:28596193-28596212 | MS.gene28484:CDS | 35.0% |
| ! | TTTTTCTTTTTGATGGAGGG+CGG | - | chr8.4:28597571-28597590 | None:intergenic | 35.0% |
| !! | CTTTGAGAAAGGGTTTTGAT+TGG | + | chr8.4:28595671-28595690 | MS.gene28484:CDS | 35.0% |
| !! | TGTATCAAGTTGAAAGCAGA+TGG | + | chr8.4:28595838-28595857 | MS.gene28484:CDS | 35.0% |
| !!! | ATGCCTTTTGCTGTTTTTGT+TGG | + | chr8.4:28596312-28596331 | MS.gene28484:CDS | 35.0% |
| AAATTGCCGAAAAACTCAGC+GGG | + | chr8.4:28596553-28596572 | MS.gene28484:CDS | 40.0% | |
| AGCATTCACAACTGAGATCA+TGG | - | chr8.4:28597154-28597173 | None:intergenic | 40.0% | |
| ATTGAAGACACGTCCAACAA+TGG | + | chr8.4:28595792-28595811 | MS.gene28484:CDS | 40.0% | |
| CCACTTACAACATCAACAGA+TGG | - | chr8.4:28597805-28597824 | None:intergenic | 40.0% | |
| CCATCTGTTGATGTTGTAAG+TGG | + | chr8.4:28597802-28597821 | MS.gene28484:CDS | 40.0% | |
| CTGAAATTCACAGTCCATTG+CGG | + | chr8.4:28597531-28597550 | MS.gene28484:CDS | 40.0% | |
| CTTGCTAGATGCAAGTACAA+TGG | + | chr8.4:28597831-28597850 | MS.gene28484:CDS | 40.0% | |
| GACACAATTGAAGCCACAAA+TGG | + | chr8.4:28597325-28597344 | MS.gene28484:CDS | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr8.4:28596102-28596121 | MS.gene28484:CDS | 40.0% | |
| GCGGGTATGGTGATTATAAA+AGG | + | chr8.4:28596571-28596590 | MS.gene28484:CDS | 40.0% | |
| GGTGACTCAAATCCAAACAA+TGG | + | chr8.4:28597506-28597525 | MS.gene28484:CDS | 40.0% | |
| GTTATGCAAGCATTTCTACG+AGG | + | chr8.4:28597361-28597380 | MS.gene28484:CDS | 40.0% | |
| TACAAAGGCAAGGTTGTTCA+AGG | + | chr8.4:28595912-28595931 | MS.gene28484:CDS | 40.0% | |
| TAGCATGAGTATACTCACCT+TGG | - | chr8.4:28596971-28596990 | None:intergenic | 40.0% | |
| TCTCTTGTTAAAGATGCAGG+CGG | + | chr8.4:28596018-28596037 | MS.gene28484:CDS | 40.0% | |
| TCTGTTGATGTTGTAAGTGG+TGG | + | chr8.4:28597805-28597824 | MS.gene28484:CDS | 40.0% | |
| TGAAATTCACAGTCCATTGC+GGG | + | chr8.4:28597532-28597551 | MS.gene28484:CDS | 40.0% | |
| TGAACAACCTTGCCTTTGTA+GGG | - | chr8.4:28595912-28595931 | None:intergenic | 40.0% | |
| TGTTGGAGGATGTGTTAGTT+GGG | + | chr8.4:28597081-28597100 | MS.gene28484:CDS | 40.0% | |
| TTCTTGCATGCACAAGAGAT+CGG | + | chr8.4:28595743-28595762 | MS.gene28484:CDS | 40.0% | |
| TTGAACAACCTTGCCTTTGT+AGG | - | chr8.4:28595913-28595932 | None:intergenic | 40.0% | |
| TTGAAGACACGTCCAACAAT+GGG | + | chr8.4:28595793-28595812 | MS.gene28484:CDS | 40.0% | |
| TTTGTTGGTGTGAATCACCA+TGG | + | chr8.4:28596327-28596346 | MS.gene28484:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | + | chr8.4:28596243-28596262 | MS.gene28484:CDS | 40.0% |
| ! | GGATAGTCCAAATGCTTTTG+TGG | + | chr8.4:28595513-28595532 | MS.gene28484:CDS | 40.0% |
| ! | TCGTTGAGTTGTTGACATAC+CGG | - | chr8.4:28596769-28596788 | None:intergenic | 40.0% |
| !! | AGTTGAAAGCAGATGGATTG+TGG | + | chr8.4:28595845-28595864 | MS.gene28484:CDS | 40.0% |
| !! | CCAAATGCTTTTGTGGATTG+TGG | + | chr8.4:28595520-28595539 | MS.gene28484:CDS | 40.0% |
| !! | CCACAATCCACAAAAGCATT+TGG | - | chr8.4:28595523-28595542 | None:intergenic | 40.0% |
| !! | GGACAACTTTTTCCCATTGT+TGG | - | chr8.4:28595808-28595827 | None:intergenic | 40.0% |
| AAACGACCCAAACAGAGTGA+TGG | + | chr8.4:28597626-28597645 | MS.gene28484:CDS | 45.0% | |
| AACAAGGAACGACGTGCAAT+TGG | + | chr8.4:28596087-28596106 | MS.gene28484:CDS | 45.0% | |
| ATCCTCCAACACATGATACG+TGG | - | chr8.4:28597072-28597091 | None:intergenic | 45.0% | |
| ATGTGTGTGTGCTCAAGAGA+GGG | + | chr8.4:28597214-28597233 | MS.gene28484:CDS | 45.0% | |
| CCTTTACGTTTAACCCGCAA+TGG | - | chr8.4:28597548-28597567 | None:intergenic | 45.0% | |
| CGACGTGCAATTGGAAAAGA+AGG | + | chr8.4:28596096-28596115 | MS.gene28484:CDS | 45.0% | |
| CTCTGTTTGGGTCGTTTACT+TGG | - | chr8.4:28597623-28597642 | None:intergenic | 45.0% | |
| CTCTTGTTAAAGATGCAGGC+GGG | + | chr8.4:28596019-28596038 | MS.gene28484:CDS | 45.0% | |
| CTTTGCCACGTATCATGTGT+TGG | + | chr8.4:28597064-28597083 | MS.gene28484:CDS | 45.0% | |
| GGCAATGCAAAATGCAATCG+AGG | + | chr8.4:28596479-28596498 | MS.gene28484:CDS | 45.0% | |
| GGTCAGTCACAATACCAACA+GGG | - | chr8.4:28596452-28596471 | None:intergenic | 45.0% | |
| GTCAGTCACAATACCAACAG+GGG | - | chr8.4:28596451-28596470 | None:intergenic | 45.0% | |
| GTGTTGGAGGATGTGTTAGT+TGG | + | chr8.4:28597080-28597099 | MS.gene28484:CDS | 45.0% | |
| GTTGGAGGATGTGTTAGTTG+GGG | + | chr8.4:28597082-28597101 | MS.gene28484:CDS | 45.0% | |
| GTTTGACCCGCAAGAAATTG+TGG | - | chr8.4:28596928-28596947 | None:intergenic | 45.0% | |
| TATGCCATAAACACCACCTG+TGG | - | chr8.4:28596524-28596543 | None:intergenic | 45.0% | |
| TATGTGTGTGTGCTCAAGAG+AGG | + | chr8.4:28597213-28597232 | MS.gene28484:CDS | 45.0% | |
| TCAGTCACAATACCAACAGG+GGG | - | chr8.4:28596450-28596469 | None:intergenic | 45.0% | |
| TCAGTTGTAGCATTCCTGGT+GGG | - | chr8.4:28597464-28597483 | None:intergenic | 45.0% | |
| TCATCATACCAGCCCTACAA+AGG | + | chr8.4:28595897-28595916 | MS.gene28484:CDS | 45.0% | |
| TCATGGCTTCGTTGTATGCT+AGG | + | chr8.4:28596420-28596439 | MS.gene28484:CDS | 45.0% | |
| TCTTGCATGCACAAGAGATC+GGG | + | chr8.4:28595744-28595763 | MS.gene28484:CDS | 45.0% | |
| TGGTCAGTCACAATACCAAC+AGG | - | chr8.4:28596453-28596472 | None:intergenic | 45.0% | |
| TTCAGTTGTAGCATTCCTGG+TGG | - | chr8.4:28597465-28597484 | None:intergenic | 45.0% | |
| TTGCTTCTGATTTACCCACC+AGG | + | chr8.4:28597447-28597466 | MS.gene28484:CDS | 45.0% | |
| TTGGGCTGATGCAAGAAGTA+GGG | + | chr8.4:28596224-28596243 | MS.gene28484:CDS | 45.0% | |
| TTTGGGCTGATGCAAGAAGT+AGG | + | chr8.4:28596223-28596242 | MS.gene28484:CDS | 45.0% | |
| ! | ACCATACCCGCTGAGTTTTT+CGG | - | chr8.4:28596562-28596581 | None:intergenic | 45.0% |
| ! | CCATTGCGGGTTAAACGTAA+AGG | + | chr8.4:28597545-28597564 | MS.gene28484:CDS | 45.0% |
| ! | GAGAAAAGGAAATGATGGGG+AGG | + | chr8.4:28595708-28595727 | MS.gene28484:CDS | 45.0% |
| ! | TCAATGATGATGCAGGTGTG+AGG | + | chr8.4:28595977-28595996 | MS.gene28484:CDS | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr8.4:28596107-28596126 | MS.gene28484:CDS | 45.0% |
| ATACCAGCCCTACAAAGGCA+AGG | + | chr8.4:28595902-28595921 | MS.gene28484:CDS | 50.0% | |
| CCTCTGCCATCACTCTGTTT+GGG | - | chr8.4:28597635-28597654 | None:intergenic | 50.0% | |
| CTACGAGGTTGCTGAAGTAG+CGG | + | chr8.4:28597376-28597395 | MS.gene28484:CDS | 50.0% | |
| TCCTCTGCCATCACTCTGTT+TGG | - | chr8.4:28597636-28597655 | None:intergenic | 50.0% | |
| TGCCACGTATCATGTGTTGG+AGG | + | chr8.4:28597067-28597086 | MS.gene28484:CDS | 50.0% | |
| ! | CTTGGATGTGGGTTGCTATC+AGG | + | chr8.4:28596363-28596382 | MS.gene28484:CDS | 50.0% |
| ! | TTTTCCCTACAACTCGCCAC+AGG | + | chr8.4:28596505-28596524 | MS.gene28484:CDS | 50.0% |
| ACCACCTGTGGCGAGTTGTA+GGG | - | chr8.4:28596512-28596531 | None:intergenic | 55.0% | |
| ATGCTAGGTAAGCCCCCTGT+TGG | + | chr8.4:28596435-28596454 | MS.gene28484:CDS | 55.0% | |
| CAACCTTGCCTTTGTAGGGC+TGG | - | chr8.4:28595908-28595927 | None:intergenic | 55.0% | |
| CCCAAACAGAGTGATGGCAG+AGG | + | chr8.4:28597632-28597651 | MS.gene28484:CDS | 55.0% | |
| CTCGCCACAGGTGGTGTTTA+TGG | + | chr8.4:28596517-28596536 | MS.gene28484:CDS | 55.0% | |
| GCCGAAAAACTCAGCGGGTA+TGG | + | chr8.4:28596558-28596577 | MS.gene28484:CDS | 55.0% | |
| CACCACCTGTGGCGAGTTGT+AGG | - | chr8.4:28596513-28596532 | None:intergenic | 60.0% | |
| TCCCTACAACTCGCCACAGG+TGG | + | chr8.4:28596508-28596527 | MS.gene28484:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 28595511 | 28597864 | 28595511 | ID=MS.gene28484 |
| chr8.4 | mRNA | 28595511 | 28597864 | 28595511 | ID=MS.gene28484.t1;Parent=MS.gene28484 |
| chr8.4 | exon | 28595511 | 28597661 | 28595511 | ID=MS.gene28484.t1.exon1;Parent=MS.gene28484.t1 |
| chr8.4 | CDS | 28595511 | 28597661 | 28595511 | ID=cds.MS.gene28484.t1;Parent=MS.gene28484.t1 |
| chr8.4 | exon | 28597748 | 28597864 | 28597748 | ID=MS.gene28484.t1.exon2;Parent=MS.gene28484.t1 |
| chr8.4 | CDS | 28597748 | 28597864 | 28597748 | ID=cds.MS.gene28484.t1;Parent=MS.gene28484.t1 |
| Gene Sequence |
| Protein sequence |
