Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28487.t1 | AEJ38001.1 | 100 | 340 | 0 | 0 | 1 | 340 | 1 | 340 | 1.30E-109 | 406.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28487.t1 | P42774 | 52.2 | 291 | 99 | 10 | 1 | 290 | 1 | 252 | 2.9e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28487.t1 | G0Z9H1 | 100.0 | 340 | 0 | 0 | 1 | 340 | 1 | 340 | 9.6e-110 | 406.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28487.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28487.t1 | MTR_8g077950 | 98.529 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 0.0 | 692 |
| MS.gene28487.t1 | MTR_8g077950 | 97.941 | 340 | 5 | 1 | 1 | 340 | 1 | 338 | 0.0 | 683 |
| MS.gene28487.t1 | MTR_8g077950 | 97.544 | 285 | 7 | 0 | 1 | 285 | 1 | 285 | 0.0 | 572 |
| MS.gene28487.t1 | MTR_8g077950 | 92.075 | 265 | 13 | 2 | 79 | 340 | 21 | 280 | 1.09e-156 | 440 |
| MS.gene28487.t1 | MTR_8g077950 | 100.000 | 38 | 0 | 0 | 1 | 38 | 1 | 38 | 4.47e-17 | 80.5 |
| MS.gene28487.t1 | MTR_8g070820 | 41.019 | 373 | 157 | 15 | 9 | 330 | 17 | 377 | 9.33e-59 | 194 |
| MS.gene28487.t1 | MTR_5g028850 | 40.212 | 378 | 161 | 15 | 3 | 327 | 10 | 375 | 1.21e-58 | 194 |
| MS.gene28487.t1 | MTR_5g028850 | 41.261 | 349 | 141 | 14 | 32 | 327 | 36 | 373 | 3.68e-58 | 193 |
| MS.gene28487.t1 | MTR_8g070820 | 41.739 | 345 | 132 | 15 | 23 | 327 | 33 | 348 | 2.53e-56 | 187 |
| MS.gene28487.t1 | MTR_7g116890 | 37.644 | 348 | 166 | 14 | 30 | 340 | 32 | 365 | 1.21e-50 | 174 |
| MS.gene28487.t1 | MTR_8g028150 | 35.574 | 357 | 192 | 12 | 1 | 328 | 1 | 348 | 3.62e-44 | 157 |
| MS.gene28487.t1 | MTR_1g034500 | 30.606 | 330 | 173 | 12 | 19 | 339 | 19 | 301 | 4.76e-32 | 122 |
| MS.gene28487.t1 | MTR_2g045670 | 45.455 | 88 | 48 | 0 | 252 | 339 | 188 | 275 | 4.01e-18 | 83.6 |
| MS.gene28487.t1 | MTR_2g045700 | 46.250 | 80 | 43 | 0 | 260 | 339 | 186 | 265 | 1.97e-16 | 78.6 |
| MS.gene28487.t1 | MTR_2g045630 | 43.750 | 80 | 41 | 1 | 260 | 339 | 197 | 272 | 8.24e-13 | 68.2 |
| MS.gene28487.t1 | MTR_3g109310 | 45.070 | 71 | 39 | 0 | 260 | 330 | 124 | 194 | 6.47e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28487.t1 | AT4G36730 | 54.651 | 344 | 110 | 11 | 1 | 340 | 1 | 302 | 1.28e-105 | 312 |
| MS.gene28487.t1 | AT4G36730 | 54.094 | 342 | 113 | 10 | 1 | 340 | 1 | 300 | 3.32e-105 | 311 |
| MS.gene28487.t1 | AT2G35530 | 45.143 | 350 | 126 | 17 | 31 | 330 | 42 | 375 | 3.15e-67 | 217 |
| MS.gene28487.t1 | AT1G32150 | 41.734 | 369 | 151 | 14 | 4 | 327 | 13 | 362 | 6.40e-59 | 195 |
| MS.gene28487.t1 | AT2G46270 | 36.991 | 319 | 160 | 13 | 30 | 328 | 30 | 327 | 7.24e-38 | 139 |
| MS.gene28487.t1 | AT2G46270 | 36.991 | 319 | 160 | 13 | 30 | 328 | 30 | 327 | 7.24e-38 | 139 |
| MS.gene28487.t1 | AT2G46270 | 37.821 | 312 | 144 | 14 | 30 | 328 | 30 | 304 | 1.61e-36 | 135 |
| MS.gene28487.t1 | AT2G46270 | 37.821 | 312 | 144 | 14 | 30 | 328 | 30 | 304 | 1.61e-36 | 135 |
| MS.gene28487.t1 | AT4G01120 | 34.012 | 344 | 177 | 11 | 2 | 328 | 7 | 317 | 4.78e-36 | 134 |
| MS.gene28487.t1 | AT5G60830 | 33.607 | 122 | 60 | 2 | 212 | 327 | 30 | 136 | 4.40e-11 | 62.0 |
| MS.gene28487.t1 | AT3G30530 | 43.038 | 79 | 43 | 1 | 262 | 340 | 81 | 157 | 5.91e-11 | 61.2 |
Find 111 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATATTGGAATGGACTTA+TGG | 0.240590 | 8.4:+28554520 | MS.gene28487:CDS |
| ATCTGAAAACGATTCTATTA+AGG | 0.259096 | 8.4:+28555556 | MS.gene28487:CDS |
| CCTGCAACTAATCTTAATAT+TGG | 0.282424 | 8.4:+28554507 | MS.gene28487:CDS |
| AGGTTGATTGTGTCTCATTT+TGG | 0.284919 | 8.4:-28554571 | None:intergenic |
| CTTTCCACTCTCTCCTGCTT+TGG | 0.297217 | 8.4:-28553806 | None:intergenic |
| TCCCTTCAAACTCTGTGGTT+TGG | 0.313210 | 8.4:-28553717 | None:intergenic |
| ACCTGGCCTCCCCACATATA+AGG | 0.315990 | 8.4:-28553300 | None:intergenic |
| TTTGACCTCATGCTTGTTGA+TGG | 0.336878 | 8.4:+28554327 | MS.gene28487:CDS |
| AGCAACAGTTGAGGCATAAT+AGG | 0.367655 | 8.4:-28553262 | None:intergenic |
| ACAAAAGAGGGTGGAGGCGC+TGG | 0.372335 | 8.4:+28555469 | MS.gene28487:CDS |
| ATTTCTCAGTCATCTGTTCC+TGG | 0.375045 | 8.4:+28554465 | MS.gene28487:CDS |
| GCCCCTGGAGCTGGTGCACT+TGG | 0.382891 | 8.4:+28554597 | MS.gene28487:CDS |
| CCAATATTAAGATTAGTTGC+AGG | 0.386214 | 8.4:-28554507 | None:intergenic |
| TCAAGGTTAGCAACTACTTC+AGG | 0.401006 | 8.4:-28555859 | None:intergenic |
| TATTTAGGCCTACTATAATC+CGG | 0.403097 | 8.4:+28553224 | MS.gene28487:intron |
| CAACCTGGTGCCCCTGGAGC+TGG | 0.416002 | 8.4:+28554588 | MS.gene28487:CDS |
| AGGAACAGATGACTGAGAAA+TGG | 0.416041 | 8.4:-28554463 | None:intergenic |
| TGCATGGAGGTTGACCAATC+TGG | 0.418724 | 8.4:-28552838 | None:intergenic |
| TTCCCAGGAGGGTACATTGC+AGG | 0.419287 | 8.4:-28553449 | None:intergenic |
| TCCTTATATGTGGGGAGGCC+AGG | 0.420738 | 8.4:+28553299 | MS.gene28487:CDS |
| TCACCAAGTGCACCAGCTCC+AGG | 0.421772 | 8.4:-28554600 | None:intergenic |
| ACTGTTGTTTGTTTCATTCA+AGG | 0.431117 | 8.4:-28555876 | None:intergenic |
| CACATATAAGGATGCGGAGT+TGG | 0.432062 | 8.4:-28553288 | None:intergenic |
| ATCGAGACAACAGGATTTCC+AGG | 0.434892 | 8.4:-28554483 | None:intergenic |
| CACAATCAACCTGGTGCCCC+TGG | 0.439660 | 8.4:+28554582 | MS.gene28487:CDS |
| GAGAGTGGAAAGGCAGGATC+AGG | 0.441081 | 8.4:+28553817 | MS.gene28487:CDS |
| GGAAAGGCAGGATCAGGTTC+AGG | 0.442394 | 8.4:+28553823 | MS.gene28487:CDS |
| GCAACAGTTGAGGCATAATA+GGG | 0.445311 | 8.4:-28553261 | None:intergenic |
| GTTGCAGGCATCGAGACAAC+AGG | 0.464141 | 8.4:-28554492 | None:intergenic |
| CAAAAGAGGGTGGAGGCGCT+GGG | 0.468781 | 8.4:+28555470 | MS.gene28487:CDS |
| GTCCCGTATGGCGCCATCAT+AGG | 0.468831 | 8.4:-28553413 | None:intergenic |
| TGCTAGCGATGAAAACCAAC+AGG | 0.473083 | 8.4:+28553987 | MS.gene28487:CDS |
| TTATGGAATGCATCTTCTGC+TGG | 0.478101 | 8.4:+28554537 | MS.gene28487:CDS |
| TATCCTGCAATGTACCCTCC+TGG | 0.485161 | 8.4:+28553446 | MS.gene28487:CDS |
| AGTAGTATTGTTCTGCGCGT+TGG | 0.490521 | 8.4:-28554436 | None:intergenic |
| TACATTGCAGGATACGGAAC+TGG | 0.491024 | 8.4:-28553437 | None:intergenic |
| GGGACCTGATGGAAAGGATA+AGG | 0.491928 | 8.4:+28553741 | MS.gene28487:CDS |
| GAATCCTTATCCTTTCCATC+AGG | 0.492059 | 8.4:-28553745 | None:intergenic |
| GCACCAGCTCCAGGGGCACC+AGG | 0.496227 | 8.4:-28554591 | None:intergenic |
| CAACTCCGCATCCTTATATG+TGG | 0.499896 | 8.4:+28553289 | MS.gene28487:CDS |
| ATTTCTTCAGCATCCTATGA+TGG | 0.501272 | 8.4:+28553400 | MS.gene28487:intron |
| TAGGGAGGTGGAGCGGCTCC+CGG | 0.502280 | 8.4:-28553243 | None:intergenic |
| GGAACAGATGACTGAGAAAT+GGG | 0.502735 | 8.4:-28554462 | None:intergenic |
| GTATTTGCAGAAGTGCCCTT+CGG | 0.507206 | 8.4:-28553778 | None:intergenic |
| GGATCAGGTTCAGGCAATGA+TGG | 0.509231 | 8.4:+28553832 | MS.gene28487:CDS |
| CATCCTATGATGGCGCCATA+CGG | 0.509674 | 8.4:+28553410 | MS.gene28487:CDS |
| GCAGGAGAGAGTGGAAAGGC+AGG | 0.510414 | 8.4:+28553811 | MS.gene28487:CDS |
| CACCAAACCACAGAGTTTGA+AGG | 0.513023 | 8.4:+28553715 | MS.gene28487:CDS |
| ATCCTATGATGGCGCCATAC+GGG | 0.519112 | 8.4:+28553411 | MS.gene28487:CDS |
| GTGGTTTGGTGCATAGCACT+TGG | 0.519553 | 8.4:-28553703 | None:intergenic |
| AACGCGCAGAACAATACTAC+TGG | 0.528283 | 8.4:+28554438 | MS.gene28487:CDS |
| TACAGCCATCATATCCAGAT+TGG | 0.529752 | 8.4:+28552824 | MS.gene28487:CDS |
| ATTTAGGCCTACTATAATCC+GGG | 0.529964 | 8.4:+28553225 | MS.gene28487:intron |
| AACCACAGAGTTTGAAGGGA+AGG | 0.532538 | 8.4:+28553720 | MS.gene28487:CDS |
| GGAGGGTACATTGCAGGATA+CGG | 0.533311 | 8.4:-28553443 | None:intergenic |
| GGAATCAGCTAGAAACAAGA+AGG | 0.536581 | 8.4:+28554299 | MS.gene28487:intron |
| ATCCTGCAATGTACCCTCCT+GGG | 0.538664 | 8.4:+28553447 | MS.gene28487:CDS |
| AACTCCGCATCCTTATATGT+GGG | 0.541725 | 8.4:+28553290 | MS.gene28487:CDS |
| TGACTAACCACTACCATGCT+AGG | 0.543160 | 8.4:-28553485 | None:intergenic |
| TCCCTTCCCTTCAAACTCTG+TGG | 0.544638 | 8.4:-28553722 | None:intergenic |
| CACCAAGTGCACCAGCTCCA+GGG | 0.545672 | 8.4:-28554599 | None:intergenic |
| TGCTCATCCTAGCATGGTAG+TGG | 0.548395 | 8.4:+28553478 | MS.gene28487:CDS |
| AGTGCCAAAGCAGGAGAGAG+TGG | 0.548817 | 8.4:+28553802 | MS.gene28487:CDS |
| TAAAACATCTTCATCAACTC+AGG | 0.549376 | 8.4:+28552697 | MS.gene28487:CDS |
| GCAAATACAAGTGCCAAAGC+AGG | 0.553074 | 8.4:+28553793 | MS.gene28487:CDS |
| CAGTGGTGACAGTGGTTCAG+AGG | 0.554290 | 8.4:+28553954 | MS.gene28487:intron |
| TTTGAAGGGAAGGGACCTGA+TGG | 0.556168 | 8.4:+28553730 | MS.gene28487:CDS |
| GTCGTGTAAACAGGAAGAGT+TGG | 0.557803 | 8.4:+28555822 | MS.gene28487:intron |
| GTTGACCAATCTGGATATGA+TGG | 0.563411 | 8.4:-28552829 | None:intergenic |
| GAAGAGTTGGAACGGTTGTG+TGG | 0.569549 | 8.4:+28555835 | MS.gene28487:CDS |
| TACGGAACTGGAGTCCCGTA+TGG | 0.571289 | 8.4:-28553425 | None:intergenic |
| ACCAAGTGCACCAGCTCCAG+GGG | 0.573078 | 8.4:-28554598 | None:intergenic |
| AGATTGGTCAACCTCCATGC+AGG | 0.576648 | 8.4:+28552840 | MS.gene28487:CDS |
| CATATGTTCCATTACCTGCA+TGG | 0.578688 | 8.4:-28552854 | None:intergenic |
| GGATGAGCATACATATTCCC+AGG | 0.579201 | 8.4:-28553464 | None:intergenic |
| GCGGTCAAGACTACGCAAGC+AGG | 0.579234 | 8.4:+28554879 | MS.gene28487:CDS |
| AACTAATCTTAATATTGGAA+TGG | 0.579722 | 8.4:+28554512 | MS.gene28487:CDS |
| AGTCTAATCGAGAGTCAGCT+AGG | 0.579925 | 8.4:+28554857 | MS.gene28487:CDS |
| GTTGAGGCATAATAGGGAGG+TGG | 0.593384 | 8.4:-28553255 | None:intergenic |
| GGATATGATGGCTGTACCGT+TGG | 0.598382 | 8.4:-28552817 | None:intergenic |
| AAGAGTTGGAACGGTTGTGT+GGG | 0.601166 | 8.4:+28555836 | MS.gene28487:CDS |
| AGCGGCTCCCGGATTATAGT+AGG | 0.602344 | 8.4:-28553232 | None:intergenic |
| GTGTGAAGAGCTACAAAAGA+GGG | 0.605519 | 8.4:+28555457 | MS.gene28487:CDS |
| ACCAAACCACAGAGTTTGAA+GGG | 0.606609 | 8.4:+28553716 | MS.gene28487:CDS |
| AGGGAAGGGACCTGATGGAA+AGG | 0.608864 | 8.4:+28553735 | MS.gene28487:CDS |
| AGTGGTGACAGTGGTTCAGA+GGG | 0.609578 | 8.4:+28553955 | MS.gene28487:intron |
| ACCACAGAGTTTGAAGGGAA+GGG | 0.611703 | 8.4:+28553721 | MS.gene28487:CDS |
| CCTCCCCACATATAAGGATG+CGG | 0.614767 | 8.4:-28553294 | None:intergenic |
| AAGAGGGTGGAGGCGCTGGG+AGG | 0.616742 | 8.4:+28555473 | MS.gene28487:CDS |
| GAATCAGCTAGAAACAAGAA+GGG | 0.620018 | 8.4:+28554300 | MS.gene28487:CDS |
| TATGTATGCTCATCCTAGCA+TGG | 0.624800 | 8.4:+28553472 | MS.gene28487:CDS |
| TGAAGAGCTACAAAAGAGGG+TGG | 0.630738 | 8.4:+28555460 | MS.gene28487:CDS |
| GATGGCTGTACCGTTGGTGT+TGG | 0.631058 | 8.4:-28552811 | None:intergenic |
| AGTGTGAAGAGCTACAAAAG+AGG | 0.632849 | 8.4:+28555456 | MS.gene28487:CDS |
| CAAAGCAGGAGAGAGTGGAA+AGG | 0.636173 | 8.4:+28553807 | MS.gene28487:CDS |
| TCCTTAAACAGTGGTGACAG+TGG | 0.636548 | 8.4:+28553946 | MS.gene28487:intron |
| AGAGCTACAAAAGAGGGTGG+AGG | 0.641292 | 8.4:+28555463 | MS.gene28487:CDS |
| CTGGTGCACTTGGTGAACAG+TGG | 0.647119 | 8.4:+28554607 | MS.gene28487:CDS |
| CCGCATCCTTATATGTGGGG+AGG | 0.647725 | 8.4:+28553294 | MS.gene28487:CDS |
| GGCATAATAGGGAGGTGGAG+CGG | 0.650234 | 8.4:-28553250 | None:intergenic |
| AGTTGGTGAAGCAACAGTTG+AGG | 0.657295 | 8.4:-28553271 | None:intergenic |
| AAAATGAGACACAATCAACC+TGG | 0.657620 | 8.4:+28554573 | MS.gene28487:CDS |
| GTAAACAGGAAGAGTTGGAA+CGG | 0.665668 | 8.4:+28555827 | MS.gene28487:intron |
| ACTCCGCATCCTTATATGTG+GGG | 0.679847 | 8.4:+28553291 | MS.gene28487:CDS |
| GAGCATACATATTCCCAGGA+GGG | 0.682181 | 8.4:-28553460 | None:intergenic |
| ACAGGAAGTACCAACACCAA+CGG | 0.687437 | 8.4:+28552801 | MS.gene28487:intron |
| ACATACCATCAACAAGCATG+AGG | 0.688310 | 8.4:-28554332 | None:intergenic |
| ATGTTCCATTACCTGCATGG+AGG | 0.690307 | 8.4:-28552851 | None:intergenic |
| ACAGTTGAGGCATAATAGGG+AGG | 0.694953 | 8.4:-28553258 | None:intergenic |
| TGAGCATACATATTCCCAGG+AGG | 0.720547 | 8.4:-28553461 | None:intergenic |
| CTAATCGAGAGTCAGCTAGG+CGG | 0.772559 | 8.4:+28554860 | MS.gene28487:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTTTATGTTGTTT+AGG | + | chr8.4:28555008-28555027 | MS.gene28487:intron | 10.0% |
| !!! | TATTTTTTACTTAAGTAAAA+TGG | - | chr8.4:28555403-28555422 | None:intergenic | 10.0% |
| !! | TATATATTTCCTTATCATTT+CGG | + | chr8.4:28552769-28552788 | MS.gene28487:intron | 15.0% |
| !!! | AATAAAGCTTTAGATTTAAA+TGG | + | chr8.4:28555274-28555293 | MS.gene28487:intron | 15.0% |
| !!! | TTTTTTTCTCAAATTATTAC+CGG | - | chr8.4:28554092-28554111 | None:intergenic | 15.0% |
| !! | AACTAATCTTAATATTGGAA+TGG | + | chr8.4:28554512-28554531 | MS.gene28487:CDS | 20.0% |
| !! | AAGATATAAAAGACCTAATA+AGG | + | chr8.4:28555042-28555061 | MS.gene28487:intron | 20.0% |
| !! | ATGATAAGGAAATATATATG+AGG | - | chr8.4:28552767-28552786 | None:intergenic | 20.0% |
| !! | ATTAAGAATGAAAATTGAAG+AGG | - | chr8.4:28553914-28553933 | None:intergenic | 20.0% |
| !! | CTAGCAAAATGATAAAAATA+AGG | - | chr8.4:28553680-28553699 | None:intergenic | 20.0% |
| !! | TGAATAATATAACTCATACT+TGG | - | chr8.4:28554986-28555005 | None:intergenic | 20.0% |
| !! | TGATAAGGAAATATATATGA+GGG | - | chr8.4:28552766-28552785 | None:intergenic | 20.0% |
| !! | TTATAAAAATAAGCTGAACA+TGG | + | chr8.4:28553089-28553108 | MS.gene28487:intron | 20.0% |
| !!! | AAGTATCTTTATTTTTTTCG+CGG | + | chr8.4:28554375-28554394 | MS.gene28487:intron | 20.0% |
| !!! | AATTTTATATCCTTAAACAG+TGG | + | chr8.4:28553937-28553956 | MS.gene28487:intron | 20.0% |
| ! | AAAAGACATACTCATATTGA+AGG | - | chr8.4:28554181-28554200 | None:intergenic | 25.0% |
| ! | AGACAAAATTTATAATCCTG+AGG | + | chr8.4:28555306-28555325 | MS.gene28487:intron | 25.0% |
| ! | AGACAAATTATAATCCTGTT+TGG | + | chr8.4:28552922-28552941 | MS.gene28487:intron | 25.0% |
| ! | ATAAAGATACTTACGATTAC+AGG | - | chr8.4:28554367-28554386 | None:intergenic | 25.0% |
| ! | ATCTGAAAACGATTCTATTA+AGG | + | chr8.4:28555556-28555575 | MS.gene28487:CDS | 25.0% |
| ! | CAAAAATACATACAGAAAAC+TGG | - | chr8.4:28554256-28554275 | None:intergenic | 25.0% |
| ! | TAATTAATGAACCACTAACT+TGG | - | chr8.4:28554951-28554970 | None:intergenic | 25.0% |
| ! | TAGTCATCAGTTACATAATA+GGG | - | chr8.4:28553198-28553217 | None:intergenic | 25.0% |
| ! | TTGAATGTAAATGCATTTGT+CGG | + | chr8.4:28554120-28554139 | MS.gene28487:intron | 25.0% |
| ! | TTTCGATCTTTGTGTTTATA+TGG | + | chr8.4:28554700-28554719 | MS.gene28487:intron | 25.0% |
| !! | CAGTTTTCTGTATGTATTTT+TGG | + | chr8.4:28554254-28554273 | MS.gene28487:intron | 25.0% |
| !! | TAATGTTGACTACATAGTTT+AGG | - | chr8.4:28555342-28555361 | None:intergenic | 25.0% |
| !! | TGATGTATTAACATTTTTCC+AGG | + | chr8.4:28553582-28553601 | MS.gene28487:intron | 25.0% |
| !! | TTAATATTGGAATGGACTTA+TGG | + | chr8.4:28554520-28554539 | MS.gene28487:CDS | 25.0% |
| !!! | GCTATTTTTATAAGCTATTC+CGG | + | chr8.4:28553061-28553080 | MS.gene28487:intron | 25.0% |
| AACGATCTCAAATAAACAAG+AGG | - | chr8.4:28553880-28553899 | None:intergenic | 30.0% | |
| AAGGAAGTTATACAAAGGTA+AGG | - | chr8.4:28554774-28554793 | None:intergenic | 30.0% | |
| ATACATCATGTATAAGCAGA+TGG | - | chr8.4:28553570-28553589 | None:intergenic | 30.0% | |
| ATATTACAACTCACAATCTG+AGG | + | chr8.4:28555792-28555811 | MS.gene28487:intron | 30.0% | |
| ATTGCATACATCCTAAATGA+TGG | - | chr8.4:28553335-28553354 | None:intergenic | 30.0% | |
| CCTGCAACTAATCTTAATAT+TGG | + | chr8.4:28554507-28554526 | MS.gene28487:CDS | 30.0% | |
| CTAGTCATCAGTTACATAAT+AGG | - | chr8.4:28553199-28553218 | None:intergenic | 30.0% | |
| GATTCATCTAAAAAACCGAA+GGG | + | chr8.4:28553763-28553782 | MS.gene28487:CDS | 30.0% | |
| GCAATTATTATGCTCTATGT+CGG | + | chr8.4:28553350-28553369 | MS.gene28487:intron | 30.0% | |
| GTAAATGTTGTCCATCATTT+AGG | + | chr8.4:28553321-28553340 | MS.gene28487:intron | 30.0% | |
| GTAGACAACCAGTAAATTTA+AGG | - | chr8.4:28555602-28555621 | None:intergenic | 30.0% | |
| TAAAACATCTTCATCAACTC+AGG | + | chr8.4:28552697-28552716 | MS.gene28487:CDS | 30.0% | |
| TATTTAGGCCTACTATAATC+CGG | + | chr8.4:28553224-28553243 | MS.gene28487:intron | 30.0% | |
| TGTTGAAGGAAGTTATACAA+AGG | - | chr8.4:28554779-28554798 | None:intergenic | 30.0% | |
| TTGCCACGTTTATCAAAATT+TGG | + | chr8.4:28553613-28553632 | MS.gene28487:intron | 30.0% | |
| ! | ATTATGCTGTTTATCCAAAC+AGG | - | chr8.4:28552939-28552958 | None:intergenic | 30.0% |
| ! | CCAATATTAAGATTAGTTGC+AGG | - | chr8.4:28554510-28554529 | None:intergenic | 30.0% |
| !! | ATGCCAAATTTTGATAAACG+TGG | - | chr8.4:28553619-28553638 | None:intergenic | 30.0% |
| !! | GTAAGCTTTGGAAATATACT+TGG | + | chr8.4:28554901-28554920 | MS.gene28487:intron | 30.0% |
| !! | GTTGATGAAGATGTTTTAGA+AGG | - | chr8.4:28552695-28552714 | None:intergenic | 30.0% |
| !! | TGATGACTAGCTTCTTATTT+AGG | + | chr8.4:28553209-28553228 | MS.gene28487:intron | 30.0% |
| !!! | GCTTATTTTTATAAGCTCTC+CGG | - | chr8.4:28553083-28553102 | None:intergenic | 30.0% |
| AAAATGAGACACAATCAACC+TGG | + | chr8.4:28554573-28554592 | MS.gene28487:CDS | 35.0% | |
| ATTTAGGCCTACTATAATCC+GGG | + | chr8.4:28553225-28553244 | MS.gene28487:intron | 35.0% | |
| ATTTCTTCAGCATCCTATGA+TGG | + | chr8.4:28553400-28553419 | MS.gene28487:intron | 35.0% | |
| CCATTCTGCCTTAAATTTAC+TGG | + | chr8.4:28555591-28555610 | MS.gene28487:intron | 35.0% | |
| CTAATGACTTCTATCTTGGT+AGG | + | chr8.4:28554278-28554297 | MS.gene28487:intron | 35.0% | |
| CTAATGTGTCTGATCTTGAT+AGG | + | chr8.4:28554801-28554820 | MS.gene28487:intron | 35.0% | |
| CTATCAAGATCAGACACATT+AGG | - | chr8.4:28554803-28554822 | None:intergenic | 35.0% | |
| GAATCAGCTAGAAACAAGAA+GGG | + | chr8.4:28554300-28554319 | MS.gene28487:CDS | 35.0% | |
| GGATTCATCTAAAAAACCGA+AGG | + | chr8.4:28553762-28553781 | MS.gene28487:CDS | 35.0% | |
| GTAATCTGTCATATACCTGT+TGG | - | chr8.4:28554005-28554024 | None:intergenic | 35.0% | |
| TAGTGCAAACCGAAATGATA+AGG | - | chr8.4:28552781-28552800 | None:intergenic | 35.0% | |
| TGGTCTAATGACTTCTATCT+TGG | + | chr8.4:28554274-28554293 | MS.gene28487:intron | 35.0% | |
| TTAGTGTTTCCATGAACTTC+AGG | + | chr8.4:28554411-28554430 | MS.gene28487:intron | 35.0% | |
| TTCTCAAATTATTACCGGTG+TGG | - | chr8.4:28554087-28554106 | None:intergenic | 35.0% | |
| TTGCATTTCTTGTACCAACT+AGG | + | chr8.4:28555430-28555449 | MS.gene28487:intron | 35.0% | |
| TTTAGGTGTCAAATAACCTC+AGG | - | chr8.4:28555325-28555344 | None:intergenic | 35.0% | |
| ! | CCAGTAAATTTAAGGCAGAA+TGG | - | chr8.4:28555594-28555613 | None:intergenic | 35.0% |
| ! | TTGATTGTGTCTCATTTTGG+CGG | - | chr8.4:28554571-28554590 | None:intergenic | 35.0% |
| !! | AATGATGGACAACATTTACC+TGG | - | chr8.4:28553320-28553339 | None:intergenic | 35.0% |
| !! | AGGTTGATTGTGTCTCATTT+TGG | - | chr8.4:28554574-28554593 | None:intergenic | 35.0% |
| AACAGTGGATGCAACAAGTA+TGG | + | chr8.4:28554622-28554641 | MS.gene28487:intron | 40.0% | |
| AACTCCGCATCCTTATATGT+GGG | + | chr8.4:28553290-28553309 | MS.gene28487:CDS | 40.0% | |
| ACATACCATCAACAAGCATG+AGG | - | chr8.4:28554335-28554354 | None:intergenic | 40.0% | |
| ACCAAACCACAGAGTTTGAA+GGG | + | chr8.4:28553716-28553735 | MS.gene28487:CDS | 40.0% | |
| AGCAACAGTTGAGGCATAAT+AGG | - | chr8.4:28553265-28553284 | None:intergenic | 40.0% | |
| AGGAACAGATGACTGAGAAA+TGG | - | chr8.4:28554466-28554485 | None:intergenic | 40.0% | |
| AGTGTGAAGAGCTACAAAAG+AGG | + | chr8.4:28555456-28555475 | MS.gene28487:CDS | 40.0% | |
| AGTTTGACCTAGTTTCCTGT+TGG | - | chr8.4:28555250-28555269 | None:intergenic | 40.0% | |
| ATAACACTGAGCCAAGTTAG+TGG | + | chr8.4:28554937-28554956 | MS.gene28487:intron | 40.0% | |
| ATCATGTATAGCCATCCAAC+TGG | + | chr8.4:28555089-28555108 | MS.gene28487:intron | 40.0% | |
| ATTTCTCAGTCATCTGTTCC+TGG | + | chr8.4:28554465-28554484 | MS.gene28487:CDS | 40.0% | |
| CAACATTGATCCAACAACTG+AGG | + | chr8.4:28555144-28555163 | MS.gene28487:intron | 40.0% | |
| CACCTCAGATTGAATGTGTT+CGG | - | chr8.4:28555743-28555762 | None:intergenic | 40.0% | |
| CAGACACATTAGGATGTTGA+AGG | - | chr8.4:28554793-28554812 | None:intergenic | 40.0% | |
| CATATGTTCCATTACCTGCA+TGG | - | chr8.4:28552857-28552876 | None:intergenic | 40.0% | |
| GAATCCTTATCCTTTCCATC+AGG | - | chr8.4:28553748-28553767 | None:intergenic | 40.0% | |
| GATACTTACGATTACAGGTG+AGG | - | chr8.4:28554362-28554381 | None:intergenic | 40.0% | |
| GCAACAGTTGAGGCATAATA+GGG | - | chr8.4:28553264-28553283 | None:intergenic | 40.0% | |
| GCAGAAGAAAATCGTATACG+AGG | - | chr8.4:28552736-28552755 | None:intergenic | 40.0% | |
| GGAACAGATGACTGAGAAAT+GGG | - | chr8.4:28554465-28554484 | None:intergenic | 40.0% | |
| GGAATCAGCTAGAAACAAGA+AGG | + | chr8.4:28554299-28554318 | MS.gene28487:intron | 40.0% | |
| GTAAACAGGAAGAGTTGGAA+CGG | + | chr8.4:28555827-28555846 | MS.gene28487:intron | 40.0% | |
| GTGTGAAGAGCTACAAAAGA+GGG | + | chr8.4:28555457-28555476 | MS.gene28487:CDS | 40.0% | |
| GTTGACCAATCTGGATATGA+TGG | - | chr8.4:28552832-28552851 | None:intergenic | 40.0% | |
| TACAGCCATCATATCCAGAT+TGG | + | chr8.4:28552824-28552843 | MS.gene28487:CDS | 40.0% | |
| TACATGATCTGGGTTGCTAT+CGG | - | chr8.4:28555077-28555096 | None:intergenic | 40.0% | |
| TAGTTGTCCAACAGGAAACT+AGG | + | chr8.4:28555240-28555259 | MS.gene28487:intron | 40.0% | |
| TATGTATGCTCATCCTAGCA+TGG | + | chr8.4:28553472-28553491 | MS.gene28487:CDS | 40.0% | |
| TCAAGGTTAGCAACTACTTC+AGG | - | chr8.4:28555862-28555881 | None:intergenic | 40.0% | |
| TCGGATCTACTCTCCTTATT+AGG | - | chr8.4:28555058-28555077 | None:intergenic | 40.0% | |
| TGCAGTTCGATACAACTACT+GGG | - | chr8.4:28555126-28555145 | None:intergenic | 40.0% | |
| TGGATGGCTATACATGATCT+GGG | - | chr8.4:28555087-28555106 | None:intergenic | 40.0% | |
| TGTTCTGTTCTCGTATTGCT+CGG | + | chr8.4:28554670-28554689 | MS.gene28487:intron | 40.0% | |
| TTATGGAATGCATCTTCTGC+TGG | + | chr8.4:28554537-28554556 | MS.gene28487:CDS | 40.0% | |
| TTGATCCAACAACTGAGGTT+TGG | + | chr8.4:28555149-28555168 | MS.gene28487:intron | 40.0% | |
| TTGCAGTTCGATACAACTAC+TGG | - | chr8.4:28555127-28555146 | None:intergenic | 40.0% | |
| TTGGATGGCTATACATGATC+TGG | - | chr8.4:28555088-28555107 | None:intergenic | 40.0% | |
| TTTCCTGTTGGACAACTACA+GGG | - | chr8.4:28555238-28555257 | None:intergenic | 40.0% | |
| ! | AATGAGAGCACATGTAACGA+TGG | - | chr8.4:28554027-28554046 | None:intergenic | 40.0% |
| ! | ACACATTCAATCTGAGGTGT+CGG | + | chr8.4:28555744-28555763 | MS.gene28487:intron | 40.0% |
| ! | ATATACTTGGTTCTCCCTTG+AGG | + | chr8.4:28554914-28554933 | MS.gene28487:intron | 40.0% |
| ! | GATGGCTTTTCACATAGGTT+TGG | + | chr8.4:28553850-28553869 | MS.gene28487:intron | 40.0% |
| ! | GCAATGATGGCTTTTCACAT+AGG | + | chr8.4:28553845-28553864 | MS.gene28487:CDS | 40.0% |
| ! | TACAACTACTGGGATTTTCC+TGG | - | chr8.4:28555116-28555135 | None:intergenic | 40.0% |
| ! | TCATTTCGGTTTGCACTAAC+AGG | + | chr8.4:28552783-28552802 | MS.gene28487:intron | 40.0% |
| ! | TTTGACCTCATGCTTGTTGA+TGG | + | chr8.4:28554327-28554346 | MS.gene28487:CDS | 40.0% |
| !! | GTTTGGTTGGACTAGTTAGA+TGG | + | chr8.4:28555166-28555185 | MS.gene28487:intron | 40.0% |
| AAACACAGACACATCCACAC+CGG | + | chr8.4:28554070-28554089 | MS.gene28487:intron | 45.0% | |
| AACCACAGAGTTTGAAGGGA+AGG | + | chr8.4:28553720-28553739 | MS.gene28487:CDS | 45.0% | |
| AACGCGCAGAACAATACTAC+TGG | + | chr8.4:28554438-28554457 | MS.gene28487:CDS | 45.0% | |
| AACGTGGCAAAAAAGTTGCC+TGG | - | chr8.4:28553603-28553622 | None:intergenic | 45.0% | |
| AAGAGTTGGAACGGTTGTGT+GGG | + | chr8.4:28555836-28555855 | MS.gene28487:CDS | 45.0% | |
| AAGCGCTTGTGTGACTGTTT+GGG | - | chr8.4:28553136-28553155 | None:intergenic | 45.0% | |
| ACAGTTGAGGCATAATAGGG+AGG | - | chr8.4:28553261-28553280 | None:intergenic | 45.0% | |
| ACCACAGAGTTTGAAGGGAA+GGG | + | chr8.4:28553721-28553740 | MS.gene28487:CDS | 45.0% | |
| ACCACTGTCACCACTGTTTA+AGG | - | chr8.4:28553950-28553969 | None:intergenic | 45.0% | |
| ACTCCGCATCCTTATATGTG+GGG | + | chr8.4:28553291-28553310 | MS.gene28487:CDS | 45.0% | |
| AGACGCAGTGTACACATTAG+AGG | - | chr8.4:28553520-28553539 | None:intergenic | 45.0% | |
| AGTAGTATTGTTCTGCGCGT+TGG | - | chr8.4:28554439-28554458 | None:intergenic | 45.0% | |
| AGTCTAATCGAGAGTCAGCT+AGG | + | chr8.4:28554857-28554876 | MS.gene28487:CDS | 45.0% | |
| ATCGAGACAACAGGATTTCC+AGG | - | chr8.4:28554486-28554505 | None:intergenic | 45.0% | |
| ATGTTCCATTACCTGCATGG+AGG | - | chr8.4:28552854-28552873 | None:intergenic | 45.0% | |
| CAACTCCGCATCCTTATATG+TGG | + | chr8.4:28553289-28553308 | MS.gene28487:CDS | 45.0% | |
| CAATAGCCCATAGAGGATCT+GGG | + | chr8.4:28555189-28555208 | MS.gene28487:intron | 45.0% | |
| CACATATAAGGATGCGGAGT+TGG | - | chr8.4:28553291-28553310 | None:intergenic | 45.0% | |
| CACCAAACCACAGAGTTTGA+AGG | + | chr8.4:28553715-28553734 | MS.gene28487:CDS | 45.0% | |
| CACCGAACACATTCAATCTG+AGG | + | chr8.4:28555738-28555757 | MS.gene28487:intron | 45.0% | |
| GAGCATACATATTCCCAGGA+GGG | - | chr8.4:28553463-28553482 | None:intergenic | 45.0% | |
| GATCAACCCAGATCCTCTAT+GGG | - | chr8.4:28555198-28555217 | None:intergenic | 45.0% | |
| GCAAATACAAGTGCCAAAGC+AGG | + | chr8.4:28553793-28553812 | MS.gene28487:CDS | 45.0% | |
| GGATGAGCATACATATTCCC+AGG | - | chr8.4:28553467-28553486 | None:intergenic | 45.0% | |
| GTCGTGTAAACAGGAAGAGT+TGG | + | chr8.4:28555822-28555841 | MS.gene28487:intron | 45.0% | |
| GTTTCCTGTTGGACAACTAC+AGG | - | chr8.4:28555239-28555258 | None:intergenic | 45.0% | |
| TAAGCGCTTGTGTGACTGTT+TGG | - | chr8.4:28553137-28553156 | None:intergenic | 45.0% | |
| TACATTGCAGGATACGGAAC+TGG | - | chr8.4:28553440-28553459 | None:intergenic | 45.0% | |
| TAGATGGCAATAGCCCATAG+AGG | + | chr8.4:28555182-28555201 | MS.gene28487:intron | 45.0% | |
| TCCAACCAAACCTCAGTTGT+TGG | - | chr8.4:28555157-28555176 | None:intergenic | 45.0% | |
| TCCCTTCAAACTCTGTGGTT+TGG | - | chr8.4:28553720-28553739 | None:intergenic | 45.0% | |
| TCCTTAAACAGTGGTGACAG+TGG | + | chr8.4:28553946-28553965 | MS.gene28487:intron | 45.0% | |
| TGAAGAGCTACAAAAGAGGG+TGG | + | chr8.4:28555460-28555479 | MS.gene28487:CDS | 45.0% | |
| TGACTAACCACTACCATGCT+AGG | - | chr8.4:28553488-28553507 | None:intergenic | 45.0% | |
| TGAGCATACATATTCCCAGG+AGG | - | chr8.4:28553464-28553483 | None:intergenic | 45.0% | |
| TGATCAACCCAGATCCTCTA+TGG | - | chr8.4:28555199-28555218 | None:intergenic | 45.0% | |
| TGCTAGCGATGAAAACCAAC+AGG | + | chr8.4:28553987-28554006 | MS.gene28487:CDS | 45.0% | |
| TGGCTCAGTGTTATCCTCAA+GGG | - | chr8.4:28554931-28554950 | None:intergenic | 45.0% | |
| TGTACACTGCGTCTATGTCT+CGG | + | chr8.4:28553526-28553545 | MS.gene28487:intron | 45.0% | |
| TGTGGATGTGTCTGTGTTTC+AGG | - | chr8.4:28554069-28554088 | None:intergenic | 45.0% | |
| TTACCACTCACCTCATGTGT+CGG | + | chr8.4:28555694-28555713 | MS.gene28487:intron | 45.0% | |
| TTCCTGTTGGACAACTACAG+GGG | - | chr8.4:28555237-28555256 | None:intergenic | 45.0% | |
| TTGGCTCAGTGTTATCCTCA+AGG | - | chr8.4:28554932-28554951 | None:intergenic | 45.0% | |
| ! | ATTTTCCTGGTCCAGTTGGA+TGG | - | chr8.4:28555103-28555122 | None:intergenic | 45.0% |
| ! | CAACTCACAATCTGAGGTGT+CGG | + | chr8.4:28555798-28555817 | MS.gene28487:intron | 45.0% |
| ! | TCCAACAACTGAGGTTTGGT+TGG | + | chr8.4:28555153-28555172 | MS.gene28487:intron | 45.0% |
| ! | TTTTTCGCGGTTGCTGAAAC+AGG | + | chr8.4:28554388-28554407 | MS.gene28487:intron | 45.0% |
| !! | ACAGGAAGTACCAACACCAA+CGG | + | chr8.4:28552801-28552820 | MS.gene28487:intron | 45.0% |
| !! | AGTTGGTGAAGCAACAGTTG+AGG | - | chr8.4:28553274-28553293 | None:intergenic | 45.0% |
| !! | GTATTTGCAGAAGTGCCCTT+CGG | - | chr8.4:28553781-28553800 | None:intergenic | 45.0% |
| !! | TTGAATGTGTTCGGTGTGTC+TGG | - | chr8.4:28555734-28555753 | None:intergenic | 45.0% |
| !! | TTGTCTACAAAGCACCGACA+CGG | + | chr8.4:28555614-28555633 | MS.gene28487:intron | 45.0% |
| AGAGCTACAAAAGAGGGTGG+AGG | + | chr8.4:28555463-28555482 | MS.gene28487:CDS | 50.0% | |
| AGGCGACACTTGTCATACAC+TGG | + | chr8.4:28554150-28554169 | MS.gene28487:intron | 50.0% | |
| AGTGGTGACAGTGGTTCAGA+GGG | + | chr8.4:28553955-28553974 | MS.gene28487:intron | 50.0% | |
| ATCCTGCAATGTACCCTCCT+GGG | + | chr8.4:28553447-28553466 | MS.gene28487:CDS | 50.0% | |
| CAAAGCAGGAGAGAGTGGAA+AGG | + | chr8.4:28553807-28553826 | MS.gene28487:CDS | 50.0% | |
| CCTCCCCACATATAAGGATG+CGG | - | chr8.4:28553297-28553316 | None:intergenic | 50.0% | |
| CGGACATGTCACTCACACAT+CGG | + | chr8.4:28555634-28555653 | MS.gene28487:intron | 50.0% | |
| CTAATCGAGAGTCAGCTAGG+CGG | + | chr8.4:28554860-28554879 | MS.gene28487:CDS | 50.0% | |
| CTACGCAAGCAGGTAAGCTT+TGG | + | chr8.4:28554889-28554908 | MS.gene28487:intron | 50.0% | |
| CTCTTCACACTCAGCCTAGT+TGG | - | chr8.4:28555447-28555466 | None:intergenic | 50.0% | |
| CTTGTGTGACTGTTTGGGAG+AGG | - | chr8.4:28553131-28553150 | None:intergenic | 50.0% | |
| CTTTCCACTCTCTCCTGCTT+TGG | - | chr8.4:28553809-28553828 | None:intergenic | 50.0% | |
| GAAGAGTTGGAACGGTTGTG+TGG | + | chr8.4:28555835-28555854 | MS.gene28487:CDS | 50.0% | |
| GCAATAGCCCATAGAGGATC+TGG | + | chr8.4:28555188-28555207 | MS.gene28487:intron | 50.0% | |
| GGATATGATGGCTGTACCGT+TGG | - | chr8.4:28552820-28552839 | None:intergenic | 50.0% | |
| GGATCAGGTTCAGGCAATGA+TGG | + | chr8.4:28553832-28553851 | MS.gene28487:CDS | 50.0% | |
| GGGACCTGATGGAAAGGATA+AGG | + | chr8.4:28553741-28553760 | MS.gene28487:CDS | 50.0% | |
| GTCAACCTCCATGCAGGTAA+TGG | + | chr8.4:28552846-28552865 | MS.gene28487:intron | 50.0% | |
| GTTGAGGCATAATAGGGAGG+TGG | - | chr8.4:28553258-28553277 | None:intergenic | 50.0% | |
| TATAGCCATCCAACTGGACC+AGG | + | chr8.4:28555095-28555114 | MS.gene28487:intron | 50.0% | |
| TATCCTGCAATGTACCCTCC+TGG | + | chr8.4:28553446-28553465 | MS.gene28487:CDS | 50.0% | |
| TCCCTTCCCTTCAAACTCTG+TGG | - | chr8.4:28553725-28553744 | None:intergenic | 50.0% | |
| TGACAAGACACCGACACATG+AGG | - | chr8.4:28555707-28555726 | None:intergenic | 50.0% | |
| TGCATGGAGGTTGACCAATC+TGG | - | chr8.4:28552841-28552860 | None:intergenic | 50.0% | |
| TGCTCATCCTAGCATGGTAG+TGG | + | chr8.4:28553478-28553497 | MS.gene28487:CDS | 50.0% | |
| TGGACAACTACAGGGGAAAC+TGG | - | chr8.4:28555230-28555249 | None:intergenic | 50.0% | |
| TGTGAGTGACATGTCCGTGT+CGG | - | chr8.4:28555631-28555650 | None:intergenic | 50.0% | |
| TTCCCCTGTAGTTGTCCAAC+AGG | + | chr8.4:28555232-28555251 | MS.gene28487:intron | 50.0% | |
| TTTGAAGGGAAGGGACCTGA+TGG | + | chr8.4:28553730-28553749 | MS.gene28487:CDS | 50.0% | |
| ! | AGATTGGTCAACCTCCATGC+AGG | + | chr8.4:28552840-28552859 | MS.gene28487:CDS | 50.0% |
| ! | ATCCTATGATGGCGCCATAC+GGG | + | chr8.4:28553411-28553430 | MS.gene28487:CDS | 50.0% |
| ! | CATCCTATGATGGCGCCATA+CGG | + | chr8.4:28553410-28553429 | MS.gene28487:CDS | 50.0% |
| ! | GGAGGGTACATTGCAGGATA+CGG | - | chr8.4:28553446-28553465 | None:intergenic | 50.0% |
| ! | TGGGATTTTCCTGGTCCAGT+TGG | - | chr8.4:28555107-28555126 | None:intergenic | 50.0% |
| !! | ATGCATTTGTCGGTGTCGTG+AGG | + | chr8.4:28554130-28554149 | MS.gene28487:intron | 50.0% |
| !! | CTGAGGTGTCGGTGCTATAT+AGG | + | chr8.4:28555755-28555774 | MS.gene28487:intron | 50.0% |
| !! | GTGGTTTGGTGCATAGCACT+TGG | - | chr8.4:28553706-28553725 | None:intergenic | 50.0% |
| ACACCGACACATGAGGTGAG+TGG | - | chr8.4:28555700-28555719 | None:intergenic | 55.0% | |
| ACCTGGCCTCCCCACATATA+AGG | - | chr8.4:28553303-28553322 | None:intergenic | 55.0% | |
| AGCGGCTCCCGGATTATAGT+AGG | - | chr8.4:28553235-28553254 | None:intergenic | 55.0% | |
| AGGGAAGGGACCTGATGGAA+AGG | + | chr8.4:28553735-28553754 | MS.gene28487:CDS | 55.0% | |
| AGTGCCAAAGCAGGAGAGAG+TGG | + | chr8.4:28553802-28553821 | MS.gene28487:CDS | 55.0% | |
| CAGTGGTGACAGTGGTTCAG+AGG | + | chr8.4:28553954-28553973 | MS.gene28487:intron | 55.0% | |
| CCGCATCCTTATATGTGGGG+AGG | + | chr8.4:28553294-28553313 | MS.gene28487:CDS | 55.0% | |
| GAGAGTGGAAAGGCAGGATC+AGG | + | chr8.4:28553817-28553836 | MS.gene28487:CDS | 55.0% | |
| GATGGCTGTACCGTTGGTGT+TGG | - | chr8.4:28552814-28552833 | None:intergenic | 55.0% | |
| GGAAAGGCAGGATCAGGTTC+AGG | + | chr8.4:28553823-28553842 | MS.gene28487:CDS | 55.0% | |
| GGCATAATAGGGAGGTGGAG+CGG | - | chr8.4:28553253-28553272 | None:intergenic | 55.0% | |
| TACGGAACTGGAGTCCCGTA+TGG | - | chr8.4:28553428-28553447 | None:intergenic | 55.0% | |
| TCCTTATATGTGGGGAGGCC+AGG | + | chr8.4:28553299-28553318 | MS.gene28487:CDS | 55.0% | |
| TGTCACTCACACATCGGCAC+TGG | + | chr8.4:28555640-28555659 | MS.gene28487:intron | 55.0% | |
| ! | CTGGTGCACTTGGTGAACAG+TGG | + | chr8.4:28554607-28554626 | MS.gene28487:CDS | 55.0% |
| ! | TTCCCAGGAGGGTACATTGC+AGG | - | chr8.4:28553452-28553471 | None:intergenic | 55.0% |
| !! | GCGTTGGCTCCTGAAGTTCA+TGG | - | chr8.4:28554423-28554442 | None:intergenic | 55.0% |
| !! | GGTGTCGGTGTCGTGTAAAC+AGG | + | chr8.4:28555813-28555832 | MS.gene28487:intron | 55.0% |
| !! | GTTGCAGGCATCGAGACAAC+AGG | - | chr8.4:28554495-28554514 | None:intergenic | 55.0% |
| ACCAAGTGCACCAGCTCCAG+GGG | - | chr8.4:28554601-28554620 | None:intergenic | 60.0% | |
| CACAATCAACCTGGTGCCCC+TGG | + | chr8.4:28554582-28554601 | MS.gene28487:CDS | 60.0% | |
| CACCAAGTGCACCAGCTCCA+GGG | - | chr8.4:28554602-28554621 | None:intergenic | 60.0% | |
| GCAGGAGAGAGTGGAAAGGC+AGG | + | chr8.4:28553811-28553830 | MS.gene28487:CDS | 60.0% | |
| GCGGTCAAGACTACGCAAGC+AGG | + | chr8.4:28554879-28554898 | MS.gene28487:CDS | 60.0% | |
| GTCCCGTATGGCGCCATCAT+AGG | - | chr8.4:28553416-28553435 | None:intergenic | 60.0% | |
| TCACCAAGTGCACCAGCTCC+AGG | - | chr8.4:28554603-28554622 | None:intergenic | 60.0% | |
| ! | ACAAAAGAGGGTGGAGGCGC+TGG | + | chr8.4:28555469-28555488 | MS.gene28487:CDS | 60.0% |
| !! | CAAAAGAGGGTGGAGGCGCT+GGG | + | chr8.4:28555470-28555489 | MS.gene28487:CDS | 60.0% |
| CAACCTGGTGCCCCTGGAGC+TGG | + | chr8.4:28554588-28554607 | MS.gene28487:CDS | 70.0% | |
| GCCCCTGGAGCTGGTGCACT+TGG | + | chr8.4:28554597-28554616 | MS.gene28487:CDS | 70.0% | |
| TAGGGAGGTGGAGCGGCTCC+CGG | - | chr8.4:28553246-28553265 | None:intergenic | 70.0% | |
| !! | AAGAGGGTGGAGGCGCTGGG+AGG | + | chr8.4:28555473-28555492 | MS.gene28487:CDS | 70.0% |
| !! | GCACCAGCTCCAGGGGCACC+AGG | - | chr8.4:28554594-28554613 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 28552662 | 28555885 | 28552662 | ID=MS.gene28487 |
| chr8.4 | mRNA | 28552662 | 28555885 | 28552662 | ID=MS.gene28487.t1;Parent=MS.gene28487 |
| chr8.4 | exon | 28552662 | 28552718 | 28552662 | ID=MS.gene28487.t1.exon1;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28552662 | 28552718 | 28552662 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28552805 | 28552861 | 28552805 | ID=MS.gene28487.t1.exon2;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28552805 | 28552861 | 28552805 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28553231 | 28553320 | 28553231 | ID=MS.gene28487.t1.exon3;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28553231 | 28553320 | 28553231 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28553410 | 28553499 | 28553410 | ID=MS.gene28487.t1.exon4;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28553410 | 28553499 | 28553410 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28553700 | 28553866 | 28553700 | ID=MS.gene28487.t1.exon5;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28553700 | 28553866 | 28553700 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28553957 | 28554008 | 28553957 | ID=MS.gene28487.t1.exon6;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28553957 | 28554008 | 28553957 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28554300 | 28554348 | 28554300 | ID=MS.gene28487.t1.exon7;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28554300 | 28554348 | 28554300 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28554433 | 28554638 | 28554433 | ID=MS.gene28487.t1.exon8;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28554433 | 28554638 | 28554433 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28554823 | 28554900 | 28554823 | ID=MS.gene28487.t1.exon9;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28554823 | 28554900 | 28554823 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28555452 | 28555577 | 28555452 | ID=MS.gene28487.t1.exon10;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28555452 | 28555577 | 28555452 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| chr8.4 | exon | 28555835 | 28555885 | 28555835 | ID=MS.gene28487.t1.exon11;Parent=MS.gene28487.t1 |
| chr8.4 | CDS | 28555835 | 28555885 | 28555835 | ID=cds.MS.gene28487.t1;Parent=MS.gene28487.t1 |
| Gene Sequence |
| Protein sequence |
