AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29325

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29325.t1 MTR_7g113680 99.615 260 1 0 1 260 52 311 0.0 540
MS.gene29325.t1 MTR_1g082660 83.539 243 36 1 1 243 1 239 4.58e-140 394
MS.gene29325.t1 MTR_3g099180 66.038 159 39 4 83 238 37 183 1.38e-62 196
MS.gene29325.t1 MTR_3g099180 66.038 159 39 4 83 238 37 183 1.58e-62 196
MS.gene29325.t1 MTR_2g023340 49.468 188 70 8 82 259 66 238 8.70e-53 172
MS.gene29325.t1 MTR_2g081600 59.770 87 34 1 100 185 21 107 2.10e-31 112
MS.gene29325.t1 MTR_2g081630 61.446 83 31 1 100 181 21 103 8.60e-31 111
MS.gene29325.t1 MTR_3g012030 39.744 78 47 0 102 179 9 86 1.02e-11 63.9
MS.gene29325.t1 MTR_8g041420 37.179 78 49 0 102 179 9 86 1.90e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29325.t1 AT1G08970 62.500 248 63 8 1 247 1 219 4.74e-88 261
MS.gene29325.t1 AT1G08970 62.500 248 63 8 1 247 1 219 4.74e-88 261
MS.gene29325.t1 AT1G08970 62.500 248 63 8 1 247 1 219 4.74e-88 261
MS.gene29325.t1 AT1G08970 62.500 248 63 8 1 247 1 219 4.74e-88 261
MS.gene29325.t1 AT1G54830 63.636 242 56 5 16 256 5 215 2.81e-87 259
MS.gene29325.t1 AT1G54830 63.636 242 56 5 16 256 5 215 2.81e-87 259
MS.gene29325.t1 AT1G54830 63.636 242 56 5 16 256 5 215 2.81e-87 259
MS.gene29325.t1 AT3G48590 68.790 157 44 3 83 238 47 199 1.70e-70 216
MS.gene29325.t1 AT5G63470 68.987 158 45 4 83 238 60 215 2.00e-67 209
MS.gene29325.t1 AT5G63470 68.987 158 45 4 83 238 60 215 2.00e-67 209
MS.gene29325.t1 AT1G56170 75.758 132 25 3 80 209 55 181 1.31e-66 205
MS.gene29325.t1 AT1G56170 75.758 132 25 3 80 209 55 181 1.31e-66 205
MS.gene29325.t1 AT5G50480 49.123 171 63 5 79 248 35 182 2.66e-46 154
MS.gene29325.t1 AT5G27910 45.349 172 72 8 77 248 15 164 4.55e-39 134
MS.gene29325.t1 AT5G50490 38.889 180 96 4 70 249 8 173 1.66e-34 123
MS.gene29325.t1 AT5G50470 39.560 182 71 8 79 251 44 195 9.52e-31 114
MS.gene29325.t1 AT5G38140 43.269 104 55 2 76 178 44 144 1.38e-25 100
MS.gene29325.t1 AT3G12480 37.179 78 49 0 102 179 9 86 1.28e-11 63.9

Find 92 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCCAGCACTTCATCTTTC+AGG 0.158704 7.2:-3653402 None:intergenic
GTCATTTGGTTTGGCTGATA+TGG 0.158964 7.2:-3652938 None:intergenic
GACTGATATCTTTGATTTCC+TGG 0.246183 7.2:+3653357 MS.gene29325:CDS
TCAACCTGCTGGAGCTCAGC+TGG 0.263146 7.2:+3653012 MS.gene29325:CDS
GGGGCCCCAGTCATTTGGTT+TGG 0.316348 7.2:-3652947 None:intergenic
GGAGATGGTGGTCGCTGTTC+CGG 0.343092 7.2:-3653610 None:intergenic
GGCTGCTGAGCATACATGTT+TGG 0.345011 7.2:-3653550 None:intergenic
GCCTCCCAAGTTGGAACTGC+TGG 0.356093 7.2:+3653499 MS.gene29325:CDS
GATCCGTTGTTACATCAGTT+GGG 0.366704 7.2:+3652972 MS.gene29325:CDS
ATCCTGGGGCCCCAGTCATT+TGG 0.379289 7.2:-3652952 None:intergenic
TCATTTGGTTTGGCTGATAT+GGG 0.380613 7.2:-3652937 None:intergenic
ACTGATGTAACAACGGATCC+TGG 0.389880 7.2:-3652968 None:intergenic
TGGAACTGCTGGTGTCATAA+TGG 0.411463 7.2:+3653510 MS.gene29325:CDS
CACAACCAGAATCCGCAAAT+GGG 0.411828 7.2:+3652875 MS.gene29325:CDS
AGAGGAACAATGCCTGTTGC+TGG 0.417994 7.2:+3653433 MS.gene29325:CDS
GGATCCGTTGTTACATCAGT+TGG 0.426256 7.2:+3652971 MS.gene29325:CDS
GCTGCTGAGCATACATGTTT+GGG 0.435445 7.2:-3653549 None:intergenic
CATCTCAGCATCTAGTGATC+TGG 0.437549 7.2:-3653631 None:intergenic
AGCAACAGCTGCAATCCTTC+TGG 0.445281 7.2:+3653089 MS.gene29325:CDS
CAGTGTGGTTCCATGAGCGC+AGG 0.449372 7.2:-3653279 None:intergenic
ACAAATGTGGCCACAGCCTC+CGG 0.450073 7.2:+3653591 MS.gene29325:CDS
GCACAACCAGAATCCGCAAA+TGG 0.451270 7.2:+3652874 MS.gene29325:CDS
CAAGAACCACAGCCTTCCTC+TGG 0.452736 7.2:+3653150 MS.gene29325:CDS
GCATCAGCAGGACCAGCAAC+AGG 0.455014 7.2:-3653445 None:intergenic
GTTGCTGCTGTTGCTGCTGA+TGG 0.455992 7.2:-3653063 None:intergenic
GGCCTGTGAGATGTTCATAT+TGG 0.456864 7.2:+3653249 MS.gene29325:CDS
TGGAGTTAACCCTGCGCTCA+TGG 0.458619 7.2:+3653269 MS.gene29325:CDS
CAGTCCACTGGTCAACCTGC+TGG 0.464075 7.2:+3653001 MS.gene29325:CDS
CACATTTGTGGTGCCATGTA+GGG 0.465255 7.2:-3653577 None:intergenic
CTGATGTAACAACGGATCCT+GGG 0.469388 7.2:-3652967 None:intergenic
CTGGTACTGGTTTGACCAGA+AGG 0.471679 7.2:-3653104 None:intergenic
CAACCTGCTGGAGCTCAGCT+GGG 0.476224 7.2:+3653013 MS.gene29325:CDS
TGACACCAGCAGTTCCAACT+TGG 0.478083 7.2:-3653504 None:intergenic
GGAACTGCTGGTGTCATAAT+GGG 0.479046 7.2:+3653511 MS.gene29325:CDS
TTGTGGTGCCATGTAGGGAT+GGG 0.484954 7.2:-3653572 None:intergenic
AACCAAATGACTGGGGCCCC+AGG 0.486456 7.2:+3652950 MS.gene29325:CDS
TTTGTGGTGCCATGTAGGGA+TGG 0.486986 7.2:-3653573 None:intergenic
GGAGGCTGTGGCCACATTTG+TGG 0.486993 7.2:-3653589 None:intergenic
GCAACAGGCATTGTTCCTCT+TGG 0.487666 7.2:-3653430 None:intergenic
ACCACACTGAAGAGAACAAA+AGG 0.492883 7.2:+3653293 MS.gene29325:CDS
CCACATTTGTGGTGCCATGT+AGG 0.497501 7.2:-3653578 None:intergenic
TACATGTTTGGGTCCATCAC+AGG 0.504424 7.2:-3653538 None:intergenic
TATCAGCCAAACCAAATGAC+TGG 0.504884 7.2:+3652941 MS.gene29325:CDS
CCTCAGCATGCCTCCCAAGT+TGG 0.514710 7.2:+3653490 MS.gene29325:CDS
TCTTGATCCTTGCCAGAGGA+AGG 0.515769 7.2:-3653162 None:intergenic
GTTGCTGCTGATGGATATGC+TGG 0.517658 7.2:-3653054 None:intergenic
TGACCCAGCTGAGCTCCAGC+AGG 0.517937 7.2:-3653016 None:intergenic
CCAGTACCAGGAAATTGAAA+AGG 0.518655 7.2:+3653117 MS.gene29325:CDS
CTTCTGGTCAAACCAGTACC+AGG 0.521956 7.2:+3653105 MS.gene29325:CDS
ATCCGTTGTTACATCAGTTG+GGG 0.531831 7.2:+3652973 MS.gene29325:CDS
GGTCGCTGTTCCGGAGGCTG+TGG 0.539229 7.2:-3653601 None:intergenic
GGACCTGAAAGATGAAGTGC+TGG 0.542953 7.2:+3653399 MS.gene29325:CDS
TGTGGTGCCATGTAGGGATG+GGG 0.546062 7.2:-3653571 None:intergenic
ACTTGGGAGGCATGCTGAGG+TGG 0.548128 7.2:-3653487 None:intergenic
ATCAGCCAAACCAAATGACT+GGG 0.550264 7.2:+3652942 MS.gene29325:CDS
GACACCAGCAGTTCCAACTT+GGG 0.552393 7.2:-3653503 None:intergenic
AAGCACCTGTCATATTTGCA+AGG 0.553287 7.2:+3653227 MS.gene29325:CDS
CAGTAAGGAAGAGCATCAGC+AGG 0.560205 7.2:-3653457 None:intergenic
CAGGCCCTTGCAAATATGAC+AGG 0.560856 7.2:-3653232 None:intergenic
TCAGCAGCCCCATCCCTACA+TGG 0.562305 7.2:+3653564 MS.gene29325:CDS
TCCTTGCCAGAGGAAGGCTG+TGG 0.564697 7.2:-3653156 None:intergenic
CAAAACAGAATGGATCATCA+AGG 0.570283 7.2:+3652851 None:intergenic
AGCATCTAGTGATCTGGAGA+TGG 0.574668 7.2:-3653625 None:intergenic
ATATTGCTGCTGCAATCACT+AGG 0.575052 7.2:+3653335 MS.gene29325:CDS
GAAGATCATGAAGGCTGATG+AGG 0.575398 7.2:+3653183 MS.gene29325:CDS
TGAGGTGGCATGTAGCAGTA+AGG 0.584291 7.2:-3653472 None:intergenic
ACCACAGCCTTCCTCTGGCA+AGG 0.585880 7.2:+3653155 MS.gene29325:CDS
AGCTCCAGCAGGTTGACCAG+TGG 0.593284 7.2:-3653005 None:intergenic
CATAATGGGAAAGCCTGTGA+TGG 0.593370 7.2:+3653525 MS.gene29325:CDS
CACGAGGCACAATGTCAACC+AGG 0.593690 7.2:-3653375 None:intergenic
ACAACCAGAATCCGCAAATG+GGG 0.594889 7.2:+3652876 MS.gene29325:CDS
ATCTAGTGATCTGGAGATGG+TGG 0.605869 7.2:-3653622 None:intergenic
CTCCAATATGAACATCTCAC+AGG 0.609517 7.2:-3653251 None:intergenic
TGATATGGGTTAGATCCGTA+CGG 0.617785 7.2:-3652923 None:intergenic
AGCGGCAGTCAAATGCCGTA+CGG 0.619913 7.2:+3652908 MS.gene29325:CDS
TGATGTAACAACGGATCCTG+GGG 0.620797 7.2:-3652966 None:intergenic
AGCACCTGTCATATTTGCAA+GGG 0.622434 7.2:+3653228 MS.gene29325:CDS
ATCTTCTTGATCCTTGCCAG+AGG 0.624577 7.2:-3653166 None:intergenic
AAAACAGAATGGATCATCAA+GGG 0.625548 7.2:+3652852 None:intergenic
ACCAGCAGTTCCAACTTGGG+AGG 0.637100 7.2:-3653500 None:intergenic
AGTGTGGTTCCATGAGCGCA+GGG 0.637592 7.2:-3653278 None:intergenic
CCTACATGGCACCACAAATG+TGG 0.644640 7.2:+3653578 MS.gene29325:CDS
GATGGTGGTCGCTGTTCCGG+AGG 0.649506 7.2:-3653607 None:intergenic
CCAACTTGGGAGGCATGCTG+AGG 0.657795 7.2:-3653490 None:intergenic
TCATCTTTCAGGTCCTCACG+AGG 0.665344 7.2:-3653391 None:intergenic
AAGGATCAAGAAGATCATGA+AGG 0.667741 7.2:+3653174 MS.gene29325:CDS
TCCGTTGTTACATCAGTTGG+GGG 0.670764 7.2:+3652974 MS.gene29325:CDS
GGTTGACATTGTGCCTCGTG+AGG 0.672349 7.2:+3653378 MS.gene29325:CDS
CAACCAGAATCCGCAAATGG+GGG 0.676007 7.2:+3652877 MS.gene29325:CDS
ACACTGAAGAGAACAAAAGG+AGG 0.682027 7.2:+3653296 MS.gene29325:CDS
GTGCTGGCTTCAATTCCAAG+AGG 0.714242 7.2:+3653415 MS.gene29325:CDS
TCAGCCAAACCAAATGACTG+GGG 0.740826 7.2:+3652943 MS.gene29325:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGGATCAAGAAGATCATGA+AGG + chr7.2:3653174-3653193 MS.gene29325:CDS 35.0%
! CAGTAACCTTTTCAATTTCC+TGG - chr7.2:3653126-3653145 None:intergenic 35.0%
! GACTGATATCTTTGATTTCC+TGG + chr7.2:3653357-3653376 MS.gene29325:CDS 35.0%
!! TCATTTGGTTTGGCTGATAT+GGG - chr7.2:3652940-3652959 None:intergenic 35.0%
AAGCACCTGTCATATTTGCA+AGG + chr7.2:3653227-3653246 MS.gene29325:CDS 40.0%
ACACTGAAGAGAACAAAAGG+AGG + chr7.2:3653296-3653315 MS.gene29325:CDS 40.0%
ACCACACTGAAGAGAACAAA+AGG + chr7.2:3653293-3653312 MS.gene29325:CDS 40.0%
AGCACCTGTCATATTTGCAA+GGG + chr7.2:3653228-3653247 MS.gene29325:CDS 40.0%
ATATTGCTGCTGCAATCACT+AGG + chr7.2:3653335-3653354 MS.gene29325:CDS 40.0%
ATCAGCCAAACCAAATGACT+GGG + chr7.2:3652942-3652961 MS.gene29325:CDS 40.0%
ATCCGTTGTTACATCAGTTG+GGG + chr7.2:3652973-3652992 MS.gene29325:CDS 40.0%
CCAGTACCAGGAAATTGAAA+AGG + chr7.2:3653117-3653136 MS.gene29325:CDS 40.0%
CTCCAATATGAACATCTCAC+AGG - chr7.2:3653254-3653273 None:intergenic 40.0%
GATCCGTTGTTACATCAGTT+GGG + chr7.2:3652972-3652991 MS.gene29325:CDS 40.0%
TATCAGCCAAACCAAATGAC+TGG + chr7.2:3652941-3652960 MS.gene29325:CDS 40.0%
! CCTTTTCAATTTCCTGGTAC+TGG - chr7.2:3653120-3653139 None:intergenic 40.0%
! TCCTTTTGTTCTCTTCAGTG+TGG - chr7.2:3653297-3653316 None:intergenic 40.0%
!! GTCATTTGGTTTGGCTGATA+TGG - chr7.2:3652941-3652960 None:intergenic 40.0%
!! TGATATGGGTTAGATCCGTA+CGG - chr7.2:3652926-3652945 None:intergenic 40.0%
AAGCCAGCACTTCATCTTTC+AGG - chr7.2:3653405-3653424 None:intergenic 45.0%
ACAACCAGAATCCGCAAATG+GGG + chr7.2:3652876-3652895 MS.gene29325:CDS 45.0%
ACTGATGTAACAACGGATCC+TGG - chr7.2:3652971-3652990 None:intergenic 45.0%
ATCTTCTTGATCCTTGCCAG+AGG - chr7.2:3653169-3653188 None:intergenic 45.0%
CACAACCAGAATCCGCAAAT+GGG + chr7.2:3652875-3652894 MS.gene29325:CDS 45.0%
CTGATGTAACAACGGATCCT+GGG - chr7.2:3652970-3652989 None:intergenic 45.0%
GAAGATCATGAAGGCTGATG+AGG + chr7.2:3653183-3653202 MS.gene29325:CDS 45.0%
GCTGCTGAGCATACATGTTT+GGG - chr7.2:3653552-3653571 None:intergenic 45.0%
GGATCCGTTGTTACATCAGT+TGG + chr7.2:3652971-3652990 MS.gene29325:CDS 45.0%
GGCCTGTGAGATGTTCATAT+TGG + chr7.2:3653249-3653268 MS.gene29325:CDS 45.0%
TACATGTTTGGGTCCATCAC+AGG - chr7.2:3653541-3653560 None:intergenic 45.0%
TCAGCCAAACCAAATGACTG+GGG + chr7.2:3652943-3652962 MS.gene29325:CDS 45.0%
TCCGTTGTTACATCAGTTGG+GGG + chr7.2:3652974-3652993 MS.gene29325:CDS 45.0%
TGATGTAACAACGGATCCTG+GGG - chr7.2:3652969-3652988 None:intergenic 45.0%
! CATAATGGGAAAGCCTGTGA+TGG + chr7.2:3653525-3653544 MS.gene29325:CDS 45.0%
!! CACATTTGTGGTGCCATGTA+GGG - chr7.2:3653580-3653599 None:intergenic 45.0%
!! GGAACTGCTGGTGTCATAAT+GGG + chr7.2:3653511-3653530 MS.gene29325:CDS 45.0%
!! TGGAACTGCTGGTGTCATAA+TGG + chr7.2:3653510-3653529 MS.gene29325:CDS 45.0%
AATCCGCAAATGGGGGTTGT+CGG + chr7.2:3652884-3652903 MS.gene29325:CDS 50.0%
AGAGGAACAATGCCTGTTGC+TGG + chr7.2:3653433-3653452 MS.gene29325:CDS 50.0%
AGCAACAGCTGCAATCCTTC+TGG + chr7.2:3653089-3653108 MS.gene29325:CDS 50.0%
CAACCAGAATCCGCAAATGG+GGG + chr7.2:3652877-3652896 MS.gene29325:CDS 50.0%
CAGGCCCTTGCAAATATGAC+AGG - chr7.2:3653235-3653254 None:intergenic 50.0%
CCTACATGGCACCACAAATG+TGG + chr7.2:3653578-3653597 MS.gene29325:CDS 50.0%
CTTCTGGTCAAACCAGTACC+AGG + chr7.2:3653105-3653124 MS.gene29325:CDS 50.0%
GACACCAGCAGTTCCAACTT+GGG - chr7.2:3653506-3653525 None:intergenic 50.0%
GCACAACCAGAATCCGCAAA+TGG + chr7.2:3652874-3652893 MS.gene29325:CDS 50.0%
GCCCCCAACTGATGTAACAA+CGG - chr7.2:3652978-3652997 None:intergenic 50.0%
GGACCTGAAAGATGAAGTGC+TGG + chr7.2:3653399-3653418 MS.gene29325:CDS 50.0%
GGCTGCTGAGCATACATGTT+TGG - chr7.2:3653553-3653572 None:intergenic 50.0%
TCTTGATCCTTGCCAGAGGA+AGG - chr7.2:3653165-3653184 None:intergenic 50.0%
TGACACCAGCAGTTCCAACT+TGG - chr7.2:3653507-3653526 None:intergenic 50.0%
TGAGGTGGCATGTAGCAGTA+AGG - chr7.2:3653475-3653494 None:intergenic 50.0%
! GCAACAGGCATTGTTCCTCT+TGG - chr7.2:3653433-3653452 None:intergenic 50.0%
! GTTGCTGCTGATGGATATGC+TGG - chr7.2:3653057-3653076 None:intergenic 50.0%
! TCATCTTTCAGGTCCTCACG+AGG - chr7.2:3653394-3653413 None:intergenic 50.0%
!! CAGTAAGGAAGAGCATCAGC+AGG - chr7.2:3653460-3653479 None:intergenic 50.0%
!! CCACATTTGTGGTGCCATGT+AGG - chr7.2:3653581-3653600 None:intergenic 50.0%
!! CTGGTACTGGTTTGACCAGA+AGG - chr7.2:3653107-3653126 None:intergenic 50.0%
!! GTGCTGGCTTCAATTCCAAG+AGG + chr7.2:3653415-3653434 MS.gene29325:CDS 50.0%
!! TTGTGGTGCCATGTAGGGAT+GGG - chr7.2:3653575-3653594 None:intergenic 50.0%
!! TTTGTGGTGCCATGTAGGGA+TGG - chr7.2:3653576-3653595 None:intergenic 50.0%
ACAAATGTGGCCACAGCCTC+CGG + chr7.2:3653591-3653610 MS.gene29325:CDS 55.0%
ACCAGCAGTTCCAACTTGGG+AGG - chr7.2:3653503-3653522 None:intergenic 55.0%
AGCGGCAGTCAAATGCCGTA+CGG + chr7.2:3652908-3652927 MS.gene29325:CDS 55.0%
AGTGTGGTTCCATGAGCGCA+GGG - chr7.2:3653281-3653300 None:intergenic 55.0%
CAAATGGGGGTTGTCGGTAG+CGG + chr7.2:3652890-3652909 MS.gene29325:CDS 55.0%
CAACCCCCATTTGCGGATTC+TGG - chr7.2:3652883-3652902 None:intergenic 55.0%
CAAGAACCACAGCCTTCCTC+TGG + chr7.2:3653150-3653169 MS.gene29325:CDS 55.0%
CACGAGGCACAATGTCAACC+AGG - chr7.2:3653378-3653397 None:intergenic 55.0%
CTACCGACAACCCCCATTTG+CGG - chr7.2:3652890-3652909 None:intergenic 55.0%
GGTTGACATTGTGCCTCGTG+AGG + chr7.2:3653378-3653397 MS.gene29325:CDS 55.0%
GTTGCTGCTGTTGCTGCTGA+TGG - chr7.2:3653066-3653085 None:intergenic 55.0%
TGGAGTTAACCCTGCGCTCA+TGG + chr7.2:3653269-3653288 MS.gene29325:CDS 55.0%
!! TGTGGTGCCATGTAGGGATG+GGG - chr7.2:3653574-3653593 None:intergenic 55.0%
AACCAAATGACTGGGGCCCC+AGG + chr7.2:3652950-3652969 MS.gene29325:CDS 60.0%
ACCACAGCCTTCCTCTGGCA+AGG + chr7.2:3653155-3653174 MS.gene29325:CDS 60.0%
ATCCTGGGGCCCCAGTCATT+TGG - chr7.2:3652955-3652974 None:intergenic 60.0%
CAACCTGCTGGAGCTCAGCT+GGG + chr7.2:3653013-3653032 MS.gene29325:CDS 60.0%
CAGTCCACTGGTCAACCTGC+TGG + chr7.2:3653001-3653020 MS.gene29325:CDS 60.0%
CAGTGTGGTTCCATGAGCGC+AGG - chr7.2:3653282-3653301 None:intergenic 60.0%
CCTCAGCATGCCTCCCAAGT+TGG + chr7.2:3653490-3653509 MS.gene29325:CDS 60.0%
GCATCAGCAGGACCAGCAAC+AGG - chr7.2:3653448-3653467 None:intergenic 60.0%
GGAGGCTGTGGCCACATTTG+TGG - chr7.2:3653592-3653611 None:intergenic 60.0%
GGGGCCCCAGTCATTTGGTT+TGG - chr7.2:3652950-3652969 None:intergenic 60.0%
TCAACCTGCTGGAGCTCAGC+TGG + chr7.2:3653012-3653031 MS.gene29325:CDS 60.0%
TCAGCAGCCCCATCCCTACA+TGG + chr7.2:3653564-3653583 MS.gene29325:CDS 60.0%
TCCTTGCCAGAGGAAGGCTG+TGG - chr7.2:3653159-3653178 None:intergenic 60.0%
! ACTTGGGAGGCATGCTGAGG+TGG - chr7.2:3653490-3653509 None:intergenic 60.0%
! AGCTCCAGCAGGTTGACCAG+TGG - chr7.2:3653008-3653027 None:intergenic 60.0%
! CCAACTTGGGAGGCATGCTG+AGG - chr7.2:3653493-3653512 None:intergenic 60.0%
! GCCTCCCAAGTTGGAACTGC+TGG + chr7.2:3653499-3653518 MS.gene29325:CDS 60.0%
! GGAGATGGTGGTCGCTGTTC+CGG - chr7.2:3653613-3653632 None:intergenic 60.0%
TGACCCAGCTGAGCTCCAGC+AGG - chr7.2:3653019-3653038 None:intergenic 65.0%
! GATGGTGGTCGCTGTTCCGG+AGG - chr7.2:3653610-3653629 None:intergenic 65.0%
! GTTGGGGGCATGCAGTCCAC+TGG + chr7.2:3652989-3653008 MS.gene29325:CDS 65.0%
GGTCGCTGTTCCGGAGGCTG+TGG - chr7.2:3653604-3653623 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 3652860 3653642 3652860 ID=MS.gene29325
chr7.2 mRNA 3652860 3653642 3652860 ID=MS.gene29325.t1;Parent=MS.gene29325
chr7.2 exon 3652860 3653642 3652860 ID=MS.gene29325.t1.exon1;Parent=MS.gene29325.t1
chr7.2 CDS 3652860 3653642 3652860 ID=cds.MS.gene29325.t1;Parent=MS.gene29325.t1
Gene Sequence

>MS.gene29325

ATGGATCATCAAGGGCACAACCAGAATCCGCAAATGGGGGTTGTCGGTAGCGGCAGTCAAATGCCGTACGGATCTAACCCATATCAGCCAAACCAAATGACTGGGGCCCCAGGATCCGTTGTTACATCAGTTGGGGGCATGCAGTCCACTGGTCAACCTGCTGGAGCTCAGCTGGGTCAGCATCAACTTGCTTACCAGCATATCCATCAGCAGCAACAGCAGCAACTTCAGCAACAGCTGCAATCCTTCTGGTCAAACCAGTACCAGGAAATTGAAAAGGTTACTGATTTCAAGAACCACAGCCTTCCTCTGGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAAGCACCTGTCATATTTGCAAGGGCCTGTGAGATGTTCATATTGGAGTTAACCCTGCGCTCATGGAACCACACTGAAGAGAACAAAAGGAGGACACTTCAGAAGAATGATATTGCTGCTGCAATCACTAGGACTGATATCTTTGATTTCCTGGTTGACATTGTGCCTCGTGAGGACCTGAAAGATGAAGTGCTGGCTTCAATTCCAAGAGGAACAATGCCTGTTGCTGGTCCTGCTGATGCTCTTCCTTACTGCTACATGCCACCTCAGCATGCCTCCCAAGTTGGAACTGCTGGTGTCATAATGGGAAAGCCTGTGATGGACCCAAACATGTATGCTCAGCAGCCCCATCCCTACATGGCACCACAAATGTGGCCACAGCCTCCGGAACAGCGACCACCATCTCCAGATCACTAG
Protein sequence

>MS.gene29325.t1

MDHQGHNQNPQMGVVGSGSQMPYGSNPYQPNQMTGAPGSVVTSVGGMQSTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGTAGVIMGKPVMDPNMYAQQPHPYMAPQMWPQPPEQRPPSPDH