AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29469

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29469.t1 MTR_5g079670 94.977 219 2 3 1 216 1 213 1.28e-147 409
MS.gene29469.t1 MTR_4g485530 77.444 133 29 1 1 132 1 133 3.05e-72 218
MS.gene29469.t1 MTR_4g073420 55.495 182 74 2 2 183 3 177 9.20e-70 214
MS.gene29469.t1 MTR_3g097450 71.200 125 36 0 2 126 3 127 2.06e-68 212
MS.gene29469.t1 MTR_8g095390 68.000 125 40 0 2 126 3 127 2.63e-64 202
MS.gene29469.t1 MTR_2g011660 68.000 125 39 1 2 125 3 127 6.92e-62 196
MS.gene29469.t1 MTR_4g091490 67.200 125 40 1 2 125 3 127 3.01e-61 195
MS.gene29469.t1 MTR_1g085040 65.600 125 43 0 2 126 3 127 8.00e-61 194
MS.gene29469.t1 MTR_5g029840 66.400 125 42 0 2 126 3 127 1.15e-60 193
MS.gene29469.t1 MTR_4g105130 65.600 125 43 0 2 126 3 127 1.73e-60 193
MS.gene29469.t1 MTR_3g074520 62.400 125 47 0 2 126 3 127 2.02e-60 192
MS.gene29469.t1 MTR_7g011170 65.600 125 43 0 2 126 3 127 2.51e-60 191
MS.gene29469.t1 MTR_1g112760 64.800 125 44 0 2 126 4 128 4.28e-60 188
MS.gene29469.t1 MTR_3g077110 64.800 125 44 0 2 126 3 127 1.85e-59 190
MS.gene29469.t1 MTR_4g102380 64.800 125 44 0 2 126 3 127 5.97e-59 187
MS.gene29469.t1 MTR_2g089620 64.516 124 44 0 2 125 3 126 9.13e-59 188
MS.gene29469.t1 MTR_4g125520 71.053 114 33 0 2 115 3 116 1.22e-58 187
MS.gene29469.t1 MTR_6g012690 64.800 125 44 0 2 126 3 127 3.00e-58 187
MS.gene29469.t1 MTR_4g082290 64.000 125 45 0 2 126 3 127 3.78e-58 189
MS.gene29469.t1 MTR_3g083540 65.041 123 43 0 4 126 34 156 4.26e-58 186
MS.gene29469.t1 MTR_3g065440 63.492 126 46 0 2 127 3 128 5.61e-58 185
MS.gene29469.t1 MTR_4g478180 60.800 125 49 0 2 126 4 128 7.68e-58 186
MS.gene29469.t1 MTR_1g085640 45.161 217 91 3 2 216 3 193 8.29e-58 187
MS.gene29469.t1 MTR_7g110830 44.651 215 97 4 2 216 3 195 9.66e-58 186
MS.gene29469.t1 MTR_5g078140 54.839 155 69 1 2 155 3 157 9.92e-58 185
MS.gene29469.t1 MTR_7g076740 49.730 185 72 4 2 173 3 179 4.88e-57 183
MS.gene29469.t1 MTR_4g082230 63.200 125 46 0 2 126 3 127 5.51e-57 186
MS.gene29469.t1 MTR_5g007370 61.111 126 49 0 1 126 2 127 7.22e-57 182
MS.gene29469.t1 MTR_8g027345 68.421 114 36 0 2 115 3 116 3.64e-56 180
MS.gene29469.t1 MTR_2g064160 62.992 127 47 0 1 127 1 127 7.33e-56 180
MS.gene29469.t1 MTR_7g111290 64.800 125 44 0 2 126 3 127 8.73e-56 182
MS.gene29469.t1 MTR_6g009430 54.605 152 65 1 2 153 3 150 1.01e-55 180
MS.gene29469.t1 MTR_7g117730 66.667 114 38 0 2 115 3 116 1.53e-55 177
MS.gene29469.t1 MTR_8g031360 62.205 127 46 2 2 126 3 129 1.75e-54 176
MS.gene29469.t1 MTR_4g121460 66.957 115 38 0 2 116 3 117 3.49e-54 176
MS.gene29469.t1 MTR_1g100653 62.281 114 43 0 2 115 3 116 8.28e-54 174
MS.gene29469.t1 MTR_8g017440 62.712 118 44 0 5 122 6 123 1.07e-53 175
MS.gene29469.t1 MTR_7g115650 52.703 148 66 1 2 145 3 150 2.11e-53 170
MS.gene29469.t1 MTR_3g461490 60.800 125 49 0 2 126 3 127 2.14e-53 174
MS.gene29469.t1 MTR_2g099740 63.559 118 43 0 5 122 6 123 4.83e-53 175
MS.gene29469.t1 MTR_8g017500 62.712 118 44 0 5 122 6 123 7.66e-53 173
MS.gene29469.t1 MTR_8g098860 64.602 113 40 0 5 117 6 118 8.05e-53 172
MS.gene29469.t1 MTR_4g100720 59.091 132 54 0 2 133 4 135 2.38e-52 167
MS.gene29469.t1 MTR_1g076150 62.609 115 43 0 1 115 2 116 3.79e-52 169
MS.gene29469.t1 MTR_8g017540 62.712 118 44 0 5 122 52 169 5.82e-52 172
MS.gene29469.t1 MTR_2g034790 64.035 114 41 0 2 115 3 116 1.18e-51 170
MS.gene29469.t1 MTR_8g017340 63.866 119 42 1 5 122 6 124 2.81e-51 172
MS.gene29469.t1 MTR_8g017390 65.487 113 38 1 5 116 6 118 1.09e-50 171
MS.gene29469.t1 MTR_5g010020 65.714 105 36 0 5 109 6 110 1.66e-50 167
MS.gene29469.t1 MTR_1g043050 58.621 116 48 0 1 116 2 117 3.67e-50 164
MS.gene29469.t1 MTR_2g089450 60.684 117 46 0 1 117 2 118 3.89e-50 163
MS.gene29469.t1 MTR_8g017350 63.025 119 43 1 5 122 6 124 4.97e-50 172
MS.gene29469.t1 MTR_1g043080 57.759 116 49 0 1 116 2 117 1.37e-49 162
MS.gene29469.t1 MTR_4g065017 58.268 127 47 2 1 121 1 127 2.23e-49 164
MS.gene29469.t1 MTR_7g010210 61.207 116 45 0 2 117 3 118 4.06e-49 163
MS.gene29469.t1 MTR_7g010210 61.207 116 45 0 2 117 3 118 5.32e-49 161
MS.gene29469.t1 MTR_7g096930 56.911 123 53 0 2 124 3 125 5.96e-49 161
MS.gene29469.t1 MTR_2g097910 62.857 105 39 0 11 115 20 124 1.71e-48 161
MS.gene29469.t1 MTR_3g039990 61.017 118 46 0 1 118 3 120 2.34e-48 160
MS.gene29469.t1 MTR_8g020490 63.636 110 40 0 9 118 6 115 7.24e-48 158
MS.gene29469.t1 MTR_0140s0030 61.207 116 45 0 2 117 4 119 8.50e-48 160
MS.gene29469.t1 MTR_0489s0020 61.207 116 45 0 2 117 4 119 8.50e-48 160
MS.gene29469.t1 MTR_0063s0090 59.821 112 45 0 1 112 2 113 1.46e-47 156
MS.gene29469.t1 MTR_7g087130 58.400 125 50 1 2 124 3 127 1.76e-47 159
MS.gene29469.t1 MTR_1g017000 56.897 116 49 1 2 116 3 118 2.18e-47 156
MS.gene29469.t1 MTR_0251s0050 60.000 115 45 1 2 115 3 117 2.96e-47 157
MS.gene29469.t1 MTR_3g028740 58.871 124 42 2 1 115 3 126 4.47e-47 158
MS.gene29469.t1 MTR_3g103570 58.621 116 47 1 2 116 3 118 6.42e-47 158
MS.gene29469.t1 MTR_7g102110 57.627 118 49 1 2 118 3 120 8.15e-47 155
MS.gene29469.t1 MTR_4g057635 54.762 126 56 1 2 126 3 128 9.83e-47 157
MS.gene29469.t1 MTR_0008s0390 59.483 116 46 1 2 116 3 118 1.06e-46 155
MS.gene29469.t1 MTR_6g012180 61.818 110 42 0 1 110 2 111 1.53e-46 156
MS.gene29469.t1 MTR_5g042030 59.483 116 47 0 11 126 7 122 2.28e-46 155
MS.gene29469.t1 MTR_2g067420 61.468 109 42 0 2 110 5 113 3.34e-46 155
MS.gene29469.t1 MTR_0008s0280 57.522 113 48 0 1 113 2 114 3.68e-46 152
MS.gene29469.t1 MTR_5g014990 56.897 116 49 1 2 116 3 118 4.03e-46 155
MS.gene29469.t1 MTR_0008s0470 57.759 116 48 1 2 116 3 118 7.02e-46 154
MS.gene29469.t1 MTR_0197s0010 55.303 132 57 1 15 144 5 136 7.26e-46 152
MS.gene29469.t1 MTR_1g017140 56.034 116 50 1 2 116 3 118 9.38e-46 155
MS.gene29469.t1 MTR_2g089420 55.556 117 52 0 1 117 1 117 1.28e-45 157
MS.gene29469.t1 MTR_2g095520 61.468 109 41 1 2 109 3 111 1.30e-45 154
MS.gene29469.t1 MTR_7g109320 60.684 117 46 0 2 118 3 119 3.52e-45 154
MS.gene29469.t1 MTR_6g055910 57.143 112 48 0 6 117 9 120 7.63e-45 151
MS.gene29469.t1 MTR_1g100667 57.018 114 48 1 13 126 15 127 1.18e-44 150
MS.gene29469.t1 MTR_5g079290 61.321 106 41 0 11 116 17 122 1.39e-44 149
MS.gene29469.t1 MTR_5g079220 57.658 111 47 0 6 116 16 126 8.59e-44 148
MS.gene29469.t1 MTR_5g079120 52.713 129 61 0 7 135 57 185 8.68e-44 149
MS.gene29469.t1 MTR_4g097570 59.259 108 43 1 2 108 3 110 1.73e-43 147
MS.gene29469.t1 MTR_6g090405 55.172 116 51 1 2 116 3 118 2.26e-43 146
MS.gene29469.t1 MTR_3g052450 57.407 108 46 0 7 114 36 143 2.81e-43 152
MS.gene29469.t1 MTR_1g073170 55.455 110 49 0 5 114 14 123 5.83e-43 145
MS.gene29469.t1 MTR_3g052430 59.048 105 43 0 10 114 40 144 7.04e-43 151
MS.gene29469.t1 MTR_5g078800 61.321 106 41 0 11 116 7 112 2.32e-42 144
MS.gene29469.t1 MTR_1g045610 56.364 110 48 0 5 114 15 124 2.40e-42 144
MS.gene29469.t1 MTR_7g017260 60.185 108 41 1 11 116 25 132 3.41e-42 144
MS.gene29469.t1 MTR_6g006030 56.034 116 49 1 2 115 3 118 3.62e-42 142
MS.gene29469.t1 MTR_0247s0040 60.748 107 42 0 6 112 2 108 3.98e-42 140
MS.gene29469.t1 MTR_0001s0360 60.377 106 42 0 11 116 7 112 4.37e-42 143
MS.gene29469.t1 MTR_7g035075 56.034 116 49 1 2 115 3 118 4.66e-42 141
MS.gene29469.t1 MTR_4g097570 58.716 109 43 2 2 108 3 111 5.77e-42 144
MS.gene29469.t1 MTR_5g078910 58.879 107 44 0 10 116 6 112 6.39e-42 144
MS.gene29469.t1 MTR_8g060940 62.376 101 38 0 11 111 7 107 7.47e-42 142
MS.gene29469.t1 MTR_4g128670 56.881 109 46 1 2 109 3 111 9.96e-42 144
MS.gene29469.t1 MTR_3g011610 57.692 104 44 0 11 114 37 140 2.78e-41 147
MS.gene29469.t1 MTR_5g078930 62.745 102 38 0 13 114 11 112 3.27e-41 139
MS.gene29469.t1 MTR_0193s0090 56.034 116 50 1 11 126 7 121 8.94e-41 138
MS.gene29469.t1 MTR_5g078860 59.434 106 43 0 11 116 7 112 1.29e-40 140
MS.gene29469.t1 MTR_5g078950 60.784 102 40 0 11 112 7 108 2.04e-40 139
MS.gene29469.t1 MTR_1g110460 49.587 121 61 0 7 127 22 142 3.79e-40 139
MS.gene29469.t1 MTR_1g086510 49.231 130 63 1 1 127 8 137 4.47e-40 138
MS.gene29469.t1 MTR_1g086530 49.573 117 59 0 11 127 33 149 7.49e-40 138
MS.gene29469.t1 MTR_8g042410 56.731 104 45 0 11 114 37 140 1.80e-39 142
MS.gene29469.t1 MTR_1g062940 43.195 169 84 5 10 173 5 166 2.46e-39 135
MS.gene29469.t1 MTR_2g096380 52.336 107 51 0 8 114 3 109 6.37e-38 132
MS.gene29469.t1 MTR_4g063100 55.882 102 45 0 13 114 9 110 7.52e-38 132
MS.gene29469.t1 MTR_3g045430 47.244 127 66 1 1 126 2 128 2.83e-36 129
MS.gene29469.t1 MTR_7g111290 69.048 84 26 0 43 126 2 85 5.47e-36 129
MS.gene29469.t1 MTR_1g021230 51.923 104 50 0 11 114 57 160 1.14e-35 130
MS.gene29469.t1 MTR_1g083630 47.656 128 59 2 7 127 8 134 2.67e-35 131
MS.gene29469.t1 MTR_2g033170 49.587 121 61 0 7 127 20 140 5.77e-35 126
MS.gene29469.t1 MTR_5g488170 35.266 207 103 7 10 194 11 208 5.88e-35 124
MS.gene29469.t1 MTR_2g088170 55.769 104 46 0 11 114 29 132 5.95e-35 129
MS.gene29469.t1 MTR_5g088640 36.408 206 96 8 13 194 14 208 7.13e-35 125
MS.gene29469.t1 MTR_5g088080 35.885 209 99 8 10 194 11 208 7.80e-35 124
MS.gene29469.t1 MTR_5g088150 35.885 209 99 8 10 194 11 208 7.80e-35 124
MS.gene29469.t1 MTR_5g488210 35.885 209 99 8 10 194 11 208 7.80e-35 124
MS.gene29469.t1 MTR_5g007300 59.770 87 35 0 1 87 54 140 2.62e-33 117
MS.gene29469.t1 MTR_4g123040 47.934 121 63 0 7 127 20 140 2.74e-33 122
MS.gene29469.t1 MTR_5g062790 47.748 111 56 2 13 122 11 120 5.37e-33 120
MS.gene29469.t1 MTR_6g055910 62.162 74 28 0 44 117 18 91 6.43e-31 114
MS.gene29469.t1 MTR_8g006470 48.148 108 55 1 7 113 6 113 1.00e-30 114
MS.gene29469.t1 MTR_5g088610 45.946 111 58 2 13 122 11 120 5.83e-29 111
MS.gene29469.t1 MTR_5g070020 48.544 103 50 2 13 114 122 222 8.03e-29 110
MS.gene29469.t1 MTR_4g029540 49.038 104 52 1 11 113 10 113 1.18e-28 109
MS.gene29469.t1 MTR_5g049190 45.946 111 59 1 7 117 13 122 1.38e-28 107
MS.gene29469.t1 MTR_4g063100 61.644 73 28 0 42 114 9 81 2.27e-28 107
MS.gene29469.t1 MTR_5g016510 47.706 109 56 1 13 121 5 112 3.11e-28 108
MS.gene29469.t1 MTR_4g019370 46.610 118 61 2 13 130 38 153 9.61e-28 107
MS.gene29469.t1 MTR_3g463400 47.573 103 51 2 13 114 133 233 1.09e-27 109
MS.gene29469.t1 MTR_3g077650 47.059 119 58 3 2 117 168 284 1.20e-27 108
MS.gene29469.t1 MTR_2g096380 58.904 73 30 0 42 114 18 90 1.35e-26 102
MS.gene29469.t1 MTR_4g094982 47.059 102 53 1 13 114 5 105 3.50e-26 102
MS.gene29469.t1 MTR_4g128190 39.496 119 58 2 11 128 11 116 5.47e-26 100
MS.gene29469.t1 MTR_3g101290 49.020 102 51 1 13 114 37 137 1.02e-25 100
MS.gene29469.t1 MTR_6g074860 46.364 110 53 3 13 118 4 111 1.59e-25 99.8
MS.gene29469.t1 MTR_3g110028 44.660 103 56 1 13 115 85 186 4.26e-25 102
MS.gene29469.t1 MTR_4g105660 45.370 108 56 2 11 117 178 283 4.68e-25 101
MS.gene29469.t1 MTR_1g057980 34.667 150 96 2 10 159 77 224 5.39e-25 99.8
MS.gene29469.t1 MTR_7g037260 46.296 108 57 1 10 117 142 248 1.13e-24 99.8
MS.gene29469.t1 MTR_7g061330 44.660 103 56 1 13 115 113 214 1.52e-24 101
MS.gene29469.t1 MTR_7g461410 44.660 103 56 1 13 115 113 214 1.52e-24 101
MS.gene29469.t1 MTR_7g061330 44.660 103 56 1 13 115 77 178 2.48e-24 100
MS.gene29469.t1 MTR_7g061330 32.000 100 66 2 13 111 25 123 1.00e-11 63.9
MS.gene29469.t1 MTR_6g015455 47.059 102 53 1 13 114 5 105 3.10e-24 100
MS.gene29469.t1 MTR_1g026870 38.514 148 76 4 13 152 85 225 4.24e-24 100
MS.gene29469.t1 MTR_4g088015 44.231 104 57 1 10 113 218 320 4.64e-24 99.0
MS.gene29469.t1 MTR_1g085880 45.455 99 53 1 16 113 17 115 1.14e-23 94.0
MS.gene29469.t1 MTR_7g451170 43.137 102 57 1 13 114 191 291 1.27e-23 97.4
MS.gene29469.t1 MTR_5g082910 46.465 99 52 1 13 111 19 116 1.29e-23 95.9
MS.gene29469.t1 MTR_7g035350 44.660 103 56 1 10 112 222 323 1.39e-23 97.8
MS.gene29469.t1 MTR_4g082040 45.192 104 54 2 13 115 105 206 3.32e-23 96.7
MS.gene29469.t1 MTR_5g041570 45.192 104 54 2 13 115 134 235 4.27e-23 96.3
MS.gene29469.t1 MTR_6g027340 36.527 167 81 4 13 156 16 180 5.68e-23 92.4
MS.gene29469.t1 MTR_1g085770 44.762 105 56 2 11 113 11 115 8.30e-23 94.0
MS.gene29469.t1 MTR_0023s0210 49.351 77 39 0 11 87 7 83 8.17e-22 85.9
MS.gene29469.t1 MTR_6g027360 45.455 99 51 2 11 108 76 172 8.49e-22 91.3
MS.gene29469.t1 MTR_3g089045 45.872 109 56 2 7 114 10 116 1.97e-21 90.1
MS.gene29469.t1 MTR_7g037130 42.718 103 58 1 10 112 142 243 1.55e-20 88.6
MS.gene29469.t1 MTR_7g450950 38.532 109 66 1 10 118 154 261 1.60e-20 88.2
MS.gene29469.t1 MTR_5g010650 41.667 96 55 1 13 108 110 204 2.17e-20 89.0
MS.gene29469.t1 MTR_6g027370 36.620 142 86 3 13 153 99 237 7.61e-20 86.7
MS.gene29469.t1 MTR_7g086960 41.748 103 59 1 12 114 88 189 4.06e-19 84.7
MS.gene29469.t1 MTR_7g061550 31.544 149 82 3 16 144 10 158 1.52e-16 77.4
MS.gene29469.t1 MTR_2g088730 68.293 41 13 0 69 109 34 74 1.24e-15 69.7
MS.gene29469.t1 MTR_5g038910 35.000 100 64 1 15 114 28 126 3.77e-15 73.9
MS.gene29469.t1 MTR_5g038910 36.842 95 59 1 15 109 28 121 5.72e-15 73.2
MS.gene29469.t1 MTR_8g017480 57.447 47 20 0 5 51 6 52 5.93e-15 67.0
MS.gene29469.t1 MTR_6g055910 54.000 50 23 0 68 117 1 50 6.12e-15 71.2
MS.gene29469.t1 MTR_8g468380 35.714 112 70 2 15 126 24 133 6.94e-15 73.2
MS.gene29469.t1 MTR_4g063100 61.905 42 16 0 73 114 5 46 2.91e-13 66.2
MS.gene29469.t1 MTR_2g096380 59.524 42 17 0 73 114 5 46 1.68e-12 63.5
MS.gene29469.t1 MTR_4g046737 56.098 41 18 0 69 109 28 68 2.52e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29469.t1 AT1G22640 73.016 126 34 0 2 127 3 128 4.72e-71 217
MS.gene29469.t1 AT4G38620 50.237 211 79 2 2 192 3 207 2.84e-70 216
MS.gene29469.t1 AT2G16720 48.661 224 102 5 2 216 3 222 2.92e-70 215
MS.gene29469.t1 AT4G09460 51.185 211 89 4 2 198 3 213 1.44e-69 213
MS.gene29469.t1 AT4G34990 70.400 125 37 0 2 126 3 127 2.73e-67 208
MS.gene29469.t1 AT1G35515 49.074 216 79 5 2 198 3 206 4.03e-66 203
MS.gene29469.t1 AT4G28110 66.129 124 42 0 2 125 3 126 1.02e-63 199
MS.gene29469.t1 AT4G21440 60.274 146 51 1 2 147 3 141 1.28e-63 201
MS.gene29469.t1 AT5G16770 66.400 125 42 0 2 126 3 127 8.81e-63 198
MS.gene29469.t1 AT5G16770 66.400 125 42 0 2 126 3 127 8.81e-63 198
MS.gene29469.t1 AT4G05100 67.200 125 40 1 2 125 3 127 1.55e-62 197
MS.gene29469.t1 AT5G16770 66.400 125 42 0 2 126 3 127 2.12e-62 197
MS.gene29469.t1 AT5G16770 66.400 125 42 0 2 126 3 127 2.12e-62 197
MS.gene29469.t1 AT3G02940 67.200 125 41 0 2 126 3 127 6.32e-62 196
MS.gene29469.t1 AT3G02940 67.200 125 41 0 2 126 3 127 1.06e-61 195
MS.gene29469.t1 AT3G02940 67.200 125 41 0 2 126 3 127 1.06e-61 195
MS.gene29469.t1 AT5G15310 67.200 125 41 0 2 126 3 127 1.09e-61 193
MS.gene29469.t1 AT5G26660 67.200 125 41 0 2 126 3 127 1.84e-61 196
MS.gene29469.t1 AT5G15310 67.200 125 41 0 2 126 3 127 2.13e-61 194
MS.gene29469.t1 AT5G15310 67.200 125 41 0 2 126 3 127 2.91e-61 194
MS.gene29469.t1 AT1G57560 57.233 159 56 2 2 160 3 149 4.86e-61 193
MS.gene29469.t1 AT1G57560 65.600 125 43 0 2 126 3 127 1.21e-60 191
MS.gene29469.t1 AT3G01140 67.200 125 41 0 2 126 3 127 1.29e-60 193
MS.gene29469.t1 AT1G09540 65.600 125 43 0 2 126 3 127 1.22e-59 191
MS.gene29469.t1 AT4G01680 65.873 126 43 0 2 127 3 128 1.70e-59 187
MS.gene29469.t1 AT4G12350 56.410 156 65 2 2 156 3 156 1.97e-59 188
MS.gene29469.t1 AT3G01140 67.480 123 40 0 4 126 48 170 2.92e-59 191
MS.gene29469.t1 AT1G74080 56.688 157 65 1 1 154 2 158 4.10e-59 189
MS.gene29469.t1 AT4G01680 65.873 126 43 0 2 127 3 128 8.68e-59 188
MS.gene29469.t1 AT3G13540 51.765 170 73 3 4 167 16 182 9.81e-59 185
MS.gene29469.t1 AT4G22680 64.000 125 45 0 2 126 3 127 1.38e-58 186
MS.gene29469.t1 AT5G60890 63.492 126 46 0 1 126 2 127 4.67e-58 185
MS.gene29469.t1 AT1G34670 62.400 125 47 0 2 126 3 127 1.05e-57 186
MS.gene29469.t1 AT3G61250 61.600 125 48 0 2 126 3 127 1.13e-57 184
MS.gene29469.t1 AT5G61420 48.087 183 90 1 2 184 3 180 3.25e-57 185
MS.gene29469.t1 AT1G18570 65.354 127 43 1 1 126 2 128 3.43e-57 184
MS.gene29469.t1 AT4G17785 63.492 126 45 1 2 126 3 128 7.85e-57 184
MS.gene29469.t1 AT4G17785 63.492 126 45 1 2 126 3 128 9.01e-57 183
MS.gene29469.t1 AT5G62320 60.606 132 45 1 2 126 4 135 9.08e-57 180
MS.gene29469.t1 AT5G10280 59.200 125 51 0 2 126 3 127 9.37e-57 183
MS.gene29469.t1 AT5G07690 64.000 125 45 0 2 126 3 127 1.09e-56 183
MS.gene29469.t1 AT5G65230 60.000 125 50 0 2 126 3 127 1.70e-56 182
MS.gene29469.t1 AT1G66230 61.600 125 48 0 2 126 3 127 5.60e-56 179
MS.gene29469.t1 AT5G54230 52.381 168 76 2 11 178 12 175 2.43e-55 179
MS.gene29469.t1 AT4G01680 60.145 138 43 1 2 127 3 140 3.00e-55 179
MS.gene29469.t1 AT5G07700 60.448 134 52 1 2 134 3 136 5.85e-55 178
MS.gene29469.t1 AT5G07700 60.448 134 52 1 2 134 3 136 5.85e-55 178
MS.gene29469.t1 AT5G16600 62.400 125 47 0 2 126 3 127 7.28e-55 178
MS.gene29469.t1 AT3G12720 60.163 123 49 0 5 127 16 138 1.48e-54 176
MS.gene29469.t1 AT5G56110 62.400 125 47 0 2 126 3 127 1.74e-54 177
MS.gene29469.t1 AT3G13890 66.071 112 38 0 5 116 6 117 8.16e-54 176
MS.gene29469.t1 AT5G49330 59.843 127 50 1 2 127 3 129 2.79e-52 172
MS.gene29469.t1 AT2G47460 66.667 114 38 0 2 115 3 116 3.46e-52 172
MS.gene29469.t1 AT1G63910 54.861 144 58 2 5 148 6 142 4.32e-52 172
MS.gene29469.t1 AT3G62610 66.667 114 38 0 2 115 3 116 1.04e-51 170
MS.gene29469.t1 AT1G74430 60.800 125 49 0 2 126 3 127 3.71e-51 167
MS.gene29469.t1 AT5G35550 67.273 110 36 0 8 117 11 120 6.27e-51 166
MS.gene29469.t1 AT1G06180 63.158 114 42 0 2 115 3 116 1.21e-50 164
MS.gene29469.t1 AT3G13890 61.157 121 38 1 5 116 6 126 1.38e-50 168
MS.gene29469.t1 AT3G28470 60.000 125 50 0 2 126 3 127 4.76e-50 165
MS.gene29469.t1 AT5G14340 56.800 125 54 0 2 126 15 139 9.10e-50 163
MS.gene29469.t1 AT3G23250 58.772 114 47 0 2 115 3 116 1.30e-49 163
MS.gene29469.t1 AT1G56160 61.739 115 44 0 2 116 5 119 1.88e-49 163
MS.gene29469.t1 AT5G12870 63.889 108 39 0 11 118 18 125 2.06e-49 162
MS.gene29469.t1 AT3G47600 61.538 117 45 0 2 118 3 119 3.52e-49 163
MS.gene29469.t1 AT2G31180 43.229 192 95 2 2 179 3 194 4.57e-49 160
MS.gene29469.t1 AT1G16490 60.526 114 45 0 2 115 5 118 4.92e-49 161
MS.gene29469.t1 AT1G74650 61.538 117 45 0 2 118 3 119 5.84e-49 163
MS.gene29469.t1 AT5G14750 65.049 103 36 0 13 115 18 120 7.86e-49 159
MS.gene29469.t1 AT1G79180 42.453 212 114 3 2 205 5 216 9.15e-49 161
MS.gene29469.t1 AT5G40330 44.565 184 95 4 13 195 14 191 1.88e-48 158
MS.gene29469.t1 AT3G28910 58.678 121 50 0 1 121 2 122 7.18e-48 160
MS.gene29469.t1 AT5G62470 59.829 117 47 0 2 118 3 119 2.43e-47 159
MS.gene29469.t1 AT1G08810 60.833 120 47 0 2 121 3 122 2.63e-47 157
MS.gene29469.t1 AT5G23000 58.621 116 47 1 2 116 3 118 1.78e-46 156
MS.gene29469.t1 AT3G08500 62.385 109 41 0 7 115 26 134 1.80e-46 157
MS.gene29469.t1 AT2G36890 54.331 127 57 1 2 127 3 129 2.78e-46 155
MS.gene29469.t1 AT3G27920 42.781 187 86 3 2 173 5 185 3.18e-46 153
MS.gene29469.t1 AT2G36890 54.331 127 57 1 2 127 44 170 3.99e-46 155
MS.gene29469.t1 AT5G65790 56.897 116 49 1 2 116 3 118 4.79e-46 156
MS.gene29469.t1 AT3G49690 57.759 116 48 1 2 116 3 118 5.36e-46 154
MS.gene29469.t1 AT3G12820 56.034 116 51 0 2 117 5 120 9.64e-46 152
MS.gene29469.t1 AT5G57620 56.897 116 49 1 2 116 3 118 1.05e-45 154
MS.gene29469.t1 AT5G62470 59.829 117 46 1 2 118 3 118 1.12e-45 155
MS.gene29469.t1 AT5G52600 61.682 107 41 0 8 114 9 115 2.07e-45 150
MS.gene29469.t1 AT1G18710 55.200 125 56 0 2 126 3 127 7.35e-45 150
MS.gene29469.t1 AT3G01530 55.932 118 52 0 11 128 25 142 3.75e-44 147
MS.gene29469.t1 AT5G06100 59.259 108 44 0 7 114 28 135 8.03e-44 152
MS.gene29469.t1 AT5G06100 59.259 108 44 0 7 114 28 135 3.40e-43 152
MS.gene29469.t1 AT5G06100 59.259 108 44 0 7 114 28 135 3.40e-43 152
MS.gene29469.t1 AT5G06100 59.259 108 44 0 7 114 28 135 3.40e-43 152
MS.gene29469.t1 AT5G06100 59.259 108 44 0 7 114 28 135 3.40e-43 152
MS.gene29469.t1 AT3G24310 59.813 107 43 0 8 114 15 121 4.15e-43 146
MS.gene29469.t1 AT4G37780 54.310 116 52 1 2 116 3 118 1.05e-42 146
MS.gene29469.t1 AT5G40350 51.562 128 62 0 11 138 17 144 1.53e-42 143
MS.gene29469.t1 AT4G13480 59.813 107 43 0 8 114 3 109 3.75e-42 143
MS.gene29469.t1 AT3G11440 57.692 104 44 0 11 114 41 144 5.77e-42 147
MS.gene29469.t1 AT1G79180 36.735 245 114 4 2 205 5 249 7.61e-42 144
MS.gene29469.t1 AT3G48920 46.923 130 64 1 8 137 15 139 2.49e-41 141
MS.gene29469.t1 AT3G11440 57.692 104 44 0 11 114 41 144 2.72e-41 147
MS.gene29469.t1 AT3G11440 57.692 104 44 0 11 114 41 144 2.72e-41 147
MS.gene29469.t1 AT3G11440 57.692 104 44 0 11 114 41 144 2.72e-41 147
MS.gene29469.t1 AT1G48000 53.390 118 53 1 11 126 32 149 3.75e-41 140
MS.gene29469.t1 AT2G26960 53.982 113 51 1 8 120 17 128 4.22e-41 145
MS.gene29469.t1 AT5G55020 56.364 110 47 1 11 120 26 134 4.57e-41 146
MS.gene29469.t1 AT5G26660 73.494 83 22 0 44 126 14 96 5.09e-41 142
MS.gene29469.t1 AT1G66370 60.577 104 41 0 11 114 8 111 6.59e-41 140
MS.gene29469.t1 AT4G25560 54.128 109 50 0 9 117 8 116 1.24e-40 140
MS.gene29469.t1 AT2G32460 57.692 104 44 0 11 114 6 109 1.49e-40 144
MS.gene29469.t1 AT2G32460 57.692 104 44 0 11 114 18 121 1.66e-40 144
MS.gene29469.t1 AT3G27810 56.190 105 46 0 11 115 20 124 3.22e-40 137
MS.gene29469.t1 AT3G53200 35.931 231 124 6 8 216 6 234 1.12e-39 136
MS.gene29469.t1 AT2G47190 47.458 118 62 0 7 124 16 133 1.17e-39 137
MS.gene29469.t1 AT5G52260 55.455 110 49 0 8 117 9 118 1.31e-39 137
MS.gene29469.t1 AT1G25340 52.174 115 55 0 13 127 20 134 3.13e-39 136
MS.gene29469.t1 AT4G26930 55.340 103 46 0 11 113 19 121 7.07e-39 138
MS.gene29469.t1 AT1G68320 48.438 128 66 0 9 136 17 144 1.18e-38 135
MS.gene29469.t1 AT3G30210 56.436 101 44 0 13 113 29 129 1.72e-38 134
MS.gene29469.t1 AT1G66380 62.264 106 40 0 9 114 6 111 2.53e-38 130
MS.gene29469.t1 AT5G59780 52.336 107 51 0 8 114 5 111 8.87e-38 131
MS.gene29469.t1 AT3G46130 53.271 107 50 0 8 114 6 112 3.33e-37 130
MS.gene29469.t1 AT1G56650 62.500 104 39 0 11 114 8 111 4.39e-37 130
MS.gene29469.t1 AT1G71030 52.991 117 47 2 40 156 11 119 1.10e-36 127
MS.gene29469.t1 AT1G71030 55.140 107 42 1 50 156 5 105 1.95e-36 126
MS.gene29469.t1 AT3G06490 49.587 121 61 0 7 127 15 135 3.73e-36 129
MS.gene29469.t1 AT1G66390 62.500 104 39 0 11 114 8 111 4.22e-36 127
MS.gene29469.t1 AT5G49620 42.484 153 76 1 7 147 22 174 2.29e-35 127
MS.gene29469.t1 AT1G22640 73.239 71 19 0 57 127 1 71 3.42e-35 124
MS.gene29469.t1 AT5G14750 73.913 69 18 0 47 115 18 86 1.03e-34 121
MS.gene29469.t1 AT1G25340 49.565 115 53 1 13 127 20 129 1.19e-34 124
MS.gene29469.t1 AT5G35550 75.676 74 18 0 44 117 50 123 1.82e-34 123
MS.gene29469.t1 AT1G25340 49.565 115 53 1 13 127 20 129 1.84e-34 124
MS.gene29469.t1 AT3G60460 50.877 114 55 1 1 113 1 114 5.58e-33 120
MS.gene29469.t1 AT5G49620 38.922 167 76 2 7 147 22 188 1.27e-31 117
MS.gene29469.t1 AT3G47600 68.000 75 24 0 44 118 39 113 2.81e-31 117
MS.gene29469.t1 AT2G26950 44.545 110 59 1 8 117 13 120 5.54e-31 117
MS.gene29469.t1 AT3G53200 36.923 195 99 6 44 216 9 201 9.35e-31 112
MS.gene29469.t1 AT3G12820 63.380 71 26 0 47 117 2 72 1.34e-29 109
MS.gene29469.t1 AT1G66380 70.130 77 23 0 38 114 2 78 7.30e-29 104
MS.gene29469.t1 AT5G40350 51.579 95 46 0 44 138 5 99 1.18e-28 106
MS.gene29469.t1 AT3G46130 61.644 73 28 0 42 114 8 80 6.29e-28 105
MS.gene29469.t1 AT3G27785 45.690 116 60 2 1 114 175 289 7.42e-28 109
MS.gene29469.t1 AT1G18960 42.029 138 65 6 1 136 1 125 1.40e-27 106
MS.gene29469.t1 AT5G59780 63.380 71 26 0 44 114 20 90 1.65e-27 104
MS.gene29469.t1 AT3G46130 63.380 71 26 0 44 114 20 90 1.94e-27 104
MS.gene29469.t1 AT5G58850 47.170 106 53 2 10 114 102 205 2.98e-27 107
MS.gene29469.t1 AT3G27810 59.722 72 29 0 44 115 4 75 3.84e-27 102
MS.gene29469.t1 AT5G11050 48.113 106 52 2 10 114 102 205 4.90e-27 107
MS.gene29469.t1 AT4G18770 43.636 110 61 1 8 117 212 320 1.32e-26 105
MS.gene29469.t1 AT3G09230 48.113 106 54 1 13 118 55 159 2.43e-26 104
MS.gene29469.t1 AT1G69560 45.872 109 56 2 8 115 118 224 4.84e-26 103
MS.gene29469.t1 AT1G69560 45.872 109 56 2 8 115 102 208 4.91e-26 103
MS.gene29469.t1 AT5G14750 69.492 59 18 0 57 115 1 59 5.20e-26 98.6
MS.gene29469.t1 AT5G14750 69.492 59 18 0 57 115 1 59 5.20e-26 98.6
MS.gene29469.t1 AT5G40360 33.000 200 109 5 8 199 153 335 5.55e-26 103
MS.gene29469.t1 AT4G37260 49.020 102 51 1 13 114 13 113 6.93e-26 102
MS.gene29469.t1 AT2G23290 50.000 102 50 1 13 114 13 113 3.46e-25 100
MS.gene29469.t1 AT3G50060 46.078 102 54 1 13 114 6 106 6.22e-25 99.8
MS.gene29469.t1 AT2G39880 39.161 143 81 3 13 151 50 190 1.11e-24 100
MS.gene29469.t1 AT3G55730 48.598 107 52 2 13 118 56 160 1.57e-24 100
MS.gene29469.t1 AT1G26780 45.283 106 55 2 11 115 96 199 2.40e-24 97.8
MS.gene29469.t1 AT4G32730 43.689 103 57 1 13 115 87 188 2.50e-24 100
MS.gene29469.t1 AT4G32730 43.689 103 57 1 13 115 87 188 2.50e-24 100
MS.gene29469.t1 AT4G32730 43.689 103 57 1 13 115 87 188 2.50e-24 100
MS.gene29469.t1 AT4G32730 43.689 103 57 1 13 115 87 188 2.50e-24 100
MS.gene29469.t1 AT5G02320 42.718 103 58 1 13 115 127 228 2.65e-24 100
MS.gene29469.t1 AT5G02320 42.718 103 58 1 13 115 127 228 2.65e-24 100
MS.gene29469.t1 AT4G32730 43.689 103 57 1 13 115 87 188 3.08e-24 100
MS.gene29469.t1 AT5G67300 33.163 196 100 6 13 200 6 178 3.37e-24 97.8
MS.gene29469.t1 AT5G11510 42.718 103 58 1 13 115 81 182 3.91e-24 100
MS.gene29469.t1 AT5G11510 42.718 103 58 1 13 115 81 182 3.91e-24 100
MS.gene29469.t1 AT5G11510 42.718 103 58 1 13 115 81 182 3.91e-24 100
MS.gene29469.t1 AT5G02320 42.718 103 58 1 13 115 67 168 4.03e-24 99.8
MS.gene29469.t1 AT1G26780 45.283 106 55 2 11 115 96 199 4.83e-24 98.2
MS.gene29469.t1 AT5G11510 42.718 103 58 1 13 115 81 182 4.92e-24 99.8
MS.gene29469.t1 AT5G11510 42.718 103 58 1 13 115 81 182 5.80e-24 99.8
MS.gene29469.t1 AT3G23250 62.712 59 22 0 57 115 1 59 1.00e-23 94.7
MS.gene29469.t1 AT3G09370 42.157 102 58 1 13 114 135 235 3.26e-23 97.1
MS.gene29469.t1 AT3G09370 42.157 102 58 1 13 114 130 230 3.30e-23 97.1
MS.gene29469.t1 AT2G25230 39.286 112 67 1 8 119 21 131 4.88e-23 93.2
MS.gene29469.t1 AT3G09370 42.157 102 58 1 13 114 143 243 5.54e-23 96.7
MS.gene29469.t1 AT1G17950 44.231 104 55 2 12 114 4 105 5.59e-23 93.2
MS.gene29469.t1 AT3G29020 35.172 145 83 3 12 146 64 207 1.72e-22 91.7
MS.gene29469.t1 AT1G66380 56.627 83 36 0 9 91 6 88 2.59e-22 87.8
MS.gene29469.t1 AT3G29020 40.385 104 61 1 12 115 66 168 3.28e-22 92.4
MS.gene29469.t1 AT1G73410 45.192 104 54 2 12 114 5 106 1.83e-21 89.4
MS.gene29469.t1 AT4G33450 42.105 114 58 3 2 114 13 119 2.08e-21 89.4
MS.gene29469.t1 AT1G73410 45.192 104 54 2 12 114 5 106 3.76e-21 87.4
MS.gene29469.t1 AT5G17800 42.718 103 58 1 12 114 92 193 9.47e-21 88.6
MS.gene29469.t1 AT1G22640 61.667 60 17 1 68 127 3 56 1.13e-18 80.5
MS.gene29469.t1 AT5G40430 35.714 112 70 2 8 119 49 158 1.75e-18 81.6
MS.gene29469.t1 AT4G00540 37.500 112 66 2 10 118 100 210 1.97e-18 83.2
MS.gene29469.t1 AT4G00540 37.500 112 66 2 10 118 98 208 3.18e-18 82.8
MS.gene29469.t1 AT5G39700 39.000 100 60 1 14 113 57 155 2.93e-16 74.3
MS.gene29469.t1 AT5G61420 59.574 47 19 0 80 126 2 48 3.80e-15 72.8
MS.gene29469.t1 AT1G14350 36.000 100 63 1 15 114 27 125 5.16e-15 73.6
MS.gene29469.t1 AT1G14350 36.000 100 63 1 15 114 27 125 5.16e-15 73.6
MS.gene29469.t1 AT2G37630 37.895 95 57 1 16 108 7 101 5.32e-15 73.2
MS.gene29469.t1 AT4G28110 65.000 40 14 0 87 126 4 43 1.99e-14 69.3
MS.gene29469.t1 AT2G02820 36.000 100 63 1 15 114 32 130 2.30e-14 71.6
MS.gene29469.t1 AT1G74650 65.116 43 15 0 76 118 1 43 2.65e-14 70.1
MS.gene29469.t1 AT2G02820 37.895 95 58 1 15 109 32 125 2.81e-14 70.9
MS.gene29469.t1 AT2G02820 37.895 95 58 1 15 109 32 125 2.88e-14 71.2
MS.gene29469.t1 AT4G25560 52.000 50 24 0 68 117 1 50 3.75e-14 68.9
MS.gene29469.t1 AT5G15310 61.364 44 17 0 83 126 5 48 6.52e-14 68.9
MS.gene29469.t1 AT5G59780 64.286 42 15 0 73 114 5 46 1.00e-13 67.0
MS.gene29469.t1 AT3G46130 64.286 42 15 0 73 114 5 46 1.19e-13 67.4
MS.gene29469.t1 AT3G28910 57.143 49 21 0 76 124 1 49 1.48e-13 67.8
MS.gene29469.t1 AT4G01060 53.846 39 18 0 69 107 32 70 8.92e-12 59.3
MS.gene29469.t1 AT4G01060 53.846 39 18 0 69 107 35 73 9.60e-12 59.3
MS.gene29469.t1 AT4G01060 53.846 39 18 0 69 107 33 71 1.25e-11 58.9
MS.gene29469.t1 AT2G46410 43.860 57 25 1 70 126 39 88 3.90e-11 58.2
MS.gene29469.t1 AT1G01380 56.410 39 17 0 69 107 34 72 4.47e-11 57.8

Find 52 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTTGGATCATTATTAA+TGG 0.217277 5.3:+64426839 None:intergenic
AAGATTCCACGTTTGATATC+TGG 0.258514 5.3:+64427815 None:intergenic
TTAGGTATAACAATCCTATT+TGG 0.261279 5.3:+64426750 None:intergenic
ATTATTATTCTCTTTATTCA+TGG 0.282101 5.3:+64426890 None:intergenic
ATTGATGTAGTATCTTTCTT+TGG 0.291687 5.3:+64426825 None:intergenic
TTGCTTTACCTTCTCCAAAT+AGG 0.293572 5.3:-64426764 MS.gene29469:CDS
TTCTTTGGATCATTATTAAT+GGG 0.329210 5.3:+64426840 None:intergenic
TTGTGTAGTTTGTGATTGTT+TGG 0.338193 5.3:+64426966 None:intergenic
ATTGATTATATACAAGTTCA+TGG 0.341918 5.3:-64428180 MS.gene29469:CDS
ATATCCATATCCCTAGTCTT+AGG 0.363929 5.3:+64426717 None:intergenic
CACCTCATTATCTGTACGTC+CGG 0.373242 5.3:+64427043 None:intergenic
GTCTTAGGAGACCCACAATT+AGG 0.397706 5.3:+64426732 None:intergenic
GTCTCCTAAGACTAGGGATA+TGG 0.399312 5.3:-64426721 MS.gene29469:CDS
AGTTCATGGTGAAGGATGTT+GGG 0.408944 5.3:-64428166 MS.gene29469:CDS
GGGTGCATCACACGACTTGA+TGG 0.428600 5.3:+64426860 None:intergenic
GGCTCCATTCCCAAGGCTGC+TGG 0.440946 5.3:-64428144 MS.gene29469:intron
GAACTAATTACCAGCAGCCT+TGG 0.441808 5.3:+64428134 None:intergenic
CTCATAGCTGGAAGGTTGCC+CGG 0.450506 5.3:-64427062 MS.gene29469:CDS
ATTAGGTGGGCACTCATAGC+TGG 0.451246 5.3:-64427074 MS.gene29469:intron
ATCGTTGTGGCAAAAGTTGT+AGG 0.454949 5.3:-64427862 MS.gene29469:CDS
TTGTGGGTCTCCTAAGACTA+GGG 0.463012 5.3:-64426727 MS.gene29469:CDS
ATCAAACTTCATGCCCTCCT+TGG 0.463925 5.3:-64427767 MS.gene29469:CDS
GCAAAAGTTGTAGGCTAAGA+TGG 0.469351 5.3:-64427853 MS.gene29469:CDS
AACTAATTACCAGCAGCCTT+GGG 0.489756 5.3:+64428135 None:intergenic
TTCATGCCCTCCTTGGCAAT+AGG 0.493745 5.3:-64427760 MS.gene29469:intron
AGGATTGTTATACCTAATTG+TGG 0.497280 5.3:-64426744 MS.gene29469:CDS
GGATTGTTATACCTAATTGT+GGG 0.506270 5.3:-64426743 MS.gene29469:CDS
AAGTTCATGGTGAAGGATGT+TGG 0.511367 5.3:-64428167 MS.gene29469:CDS
AGTCCTCATGTTTCTACTGT+GGG 0.520478 5.3:-64426933 MS.gene29469:CDS
TAGTCCTCATGTTTCTACTG+TGG 0.535696 5.3:-64426934 MS.gene29469:CDS
ATTACCAGCAGCCTTGGGAA+TGG 0.546588 5.3:+64428140 None:intergenic
AAAACATCAACAAAGGTGCT+TGG 0.548391 5.3:-64428227 MS.gene29469:CDS
ACCTCATTATCTGTACGTCC+GGG 0.555070 5.3:+64427044 None:intergenic
TATATACAAGTTCATGGTGA+AGG 0.571901 5.3:-64428174 MS.gene29469:CDS
GGGCATGAAGTTTGATGATG+AGG 0.572030 5.3:+64427774 None:intergenic
TGATTAGGGTTGCATCGTTG+TGG 0.581158 5.3:-64427875 MS.gene29469:intron
ATTGTGGGTCTCCTAAGACT+AGG 0.585549 5.3:-64426728 MS.gene29469:CDS
GCCCGGACGTACAGATAATG+AGG 0.592159 5.3:-64427045 MS.gene29469:CDS
ATAACAATCCTATTTGGAGA+AGG 0.596544 5.3:+64426756 None:intergenic
AACTAGGGTACCTATTGCCA+AGG 0.603623 5.3:+64427750 None:intergenic
ACAGTAGAAACATGAGGACT+AGG 0.612620 5.3:+64426936 None:intergenic
GTTCATGGTGAAGGATGTTG+GGG 0.613354 5.3:-64428165 MS.gene29469:CDS
ATGTTGGGGCTCCATTCCCA+AGG 0.614235 5.3:-64428151 MS.gene29469:CDS
ATTTGGAGAAGGTAAAGCAA+TGG 0.617996 5.3:+64426767 None:intergenic
GACAAAGAAAACATCAACAA+AGG 0.643163 5.3:-64428234 MS.gene29469:CDS
AGGGTACCTATTGCCAAGGA+GGG 0.645067 5.3:+64427754 None:intergenic
GGTTAAGTCAAGATTCAAAG+AGG 0.653013 5.3:+64426788 None:intergenic
AACAATCACAAACTACACAA+AGG 0.653555 5.3:-64426963 MS.gene29469:CDS
GGTGGGCACTCATAGCTGGA+AGG 0.655708 5.3:-64427070 MS.gene29469:CDS
TAGGGTACCTATTGCCAAGG+AGG 0.656191 5.3:+64427753 None:intergenic
GTGCCCACAGTAGAAACATG+AGG 0.706358 5.3:+64426930 None:intergenic
TTACGACCAGATATCAAACG+TGG 0.720036 5.3:-64427821 MS.gene29469:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAATATAATTTAAGT+GGG + chr5.3:64427496-64427515 None:intergenic 10.0%
!! TAAAACAAATATAATTTAAG+TGG + chr5.3:64427497-64427516 None:intergenic 10.0%
!! ATTATTATTCTCTTTATTCA+TGG + chr5.3:64428066-64428085 None:intergenic 15.0%
!! TATTTAAATTAGTATATGCT+CGG - chr5.3:64427718-64427737 MS.gene29469:intron 15.0%
!! ACAAACATATTTCCTTATAA+GGG + chr5.3:64427749-64427768 None:intergenic 20.0%
!! ATTGATTATATACAAGTTCA+TGG - chr5.3:64426773-64426792 MS.gene29469:CDS 20.0%
!! ATTTAAATTAGTATATGCTC+GGG - chr5.3:64427719-64427738 MS.gene29469:intron 20.0%
!! GTGTATTATTATCATGATTA+GGG - chr5.3:64427064-64427083 MS.gene29469:CDS 20.0%
!! TGTGTATTATTATCATGATT+AGG - chr5.3:64427063-64427082 MS.gene29469:CDS 20.0%
!! TTCTTTGGATCATTATTAAT+GGG + chr5.3:64428116-64428135 None:intergenic 20.0%
!! TTTCTTTGGATCATTATTAA+TGG + chr5.3:64428117-64428136 None:intergenic 20.0%
!!! ATTTTAGTAATATCACCTTT+TGG - chr5.3:64427780-64427799 MS.gene29469:CDS 20.0%
!!! TAGAACTATATGAGATTTTT+TGG + chr5.3:64427840-64427859 None:intergenic 20.0%
! AAAAGCTTGTAATGAAAACT+AGG + chr5.3:64427222-64427241 None:intergenic 25.0%
! AAAGCTTGTAATGAAAACTA+GGG + chr5.3:64427221-64427240 None:intergenic 25.0%
! AAGTTAAATTCATTGCCAAA+AGG + chr5.3:64427798-64427817 None:intergenic 25.0%
! ATAATGAGGTGAAAAACTAT+TGG - chr5.3:64427922-64427941 MS.gene29469:intron 25.0%
! ATATCGTTCTTCTTAATTCA+TGG - chr5.3:64426868-64426887 MS.gene29469:CDS 25.0%
! ATGTATGTATCTATATTAGG+TGG - chr5.3:64427865-64427884 MS.gene29469:CDS 25.0%
! ATTGATGTAGTATCTTTCTT+TGG + chr5.3:64428131-64428150 None:intergenic 25.0%
! CGTAGAAAGCTAATAAAAAT+GGG - chr5.3:64427957-64427976 MS.gene29469:intron 25.0%
! GACAAACATATTTCCTTATA+AGG + chr5.3:64427750-64427769 None:intergenic 25.0%
! TCGTAGAAAGCTAATAAAAA+TGG - chr5.3:64427956-64427975 MS.gene29469:intron 25.0%
! TGAACTTGAATTAACAAAGA+TGG + chr5.3:64426950-64426969 None:intergenic 25.0%
! TGCATGTATGTATCTATATT+AGG - chr5.3:64427862-64427881 MS.gene29469:CDS 25.0%
! TGTATGTATCTATATTAGGT+GGG - chr5.3:64427866-64427885 MS.gene29469:CDS 25.0%
! TTAGGTATAACAATCCTATT+TGG + chr5.3:64428206-64428225 None:intergenic 25.0%
!!! ACAAGCTTTTATTTACCTAT+CGG - chr5.3:64427232-64427251 MS.gene29469:intron 25.0%
AACAATCACAAACTACACAA+AGG - chr5.3:64427990-64428009 MS.gene29469:intron 30.0%
AACATATTTCCTTATAAGGG+AGG + chr5.3:64427746-64427765 None:intergenic 30.0%
AGGATTGTTATACCTAATTG+TGG - chr5.3:64428209-64428228 MS.gene29469:CDS 30.0%
ATAACAATCCTATTTGGAGA+AGG + chr5.3:64428200-64428219 None:intergenic 30.0%
GACAAAGAAAACATCAACAA+AGG - chr5.3:64426719-64426738 MS.gene29469:CDS 30.0%
GGATTGTTATACCTAATTGT+GGG - chr5.3:64428210-64428229 MS.gene29469:CDS 30.0%
TATATACAAGTTCATGGTGA+AGG - chr5.3:64426779-64426798 MS.gene29469:CDS 30.0%
TGAACCAATATGAGAATTCA+TGG + chr5.3:64426894-64426913 None:intergenic 30.0%
TTCCAACACATTAATCCTTT+AGG - chr5.3:64427392-64427411 MS.gene29469:intron 30.0%
! ACCATGATAATTTGGAACTT+CGG - chr5.3:64427453-64427472 MS.gene29469:intron 30.0%
! ATCCTTTAGGTGAATCTTTT+TGG - chr5.3:64427405-64427424 MS.gene29469:intron 30.0%
! ATGTTTTCTTTGTCACAACA+AGG + chr5.3:64426713-64426732 None:intergenic 30.0%
! TCTTTGAGAAAATCCAAGTT+CGG + chr5.3:64427528-64427547 None:intergenic 30.0%
! TTGTGTAGTTTGTGATTGTT+TGG + chr5.3:64427990-64428009 None:intergenic 30.0%
! TTTTATCCAAAAACCGAACT+TGG - chr5.3:64427512-64427531 MS.gene29469:intron 30.0%
!! GAATTCTCATATTGGTTCAA+TGG - chr5.3:64426895-64426914 MS.gene29469:CDS 30.0%
AAGATTCCACGTTTGATATC+TGG + chr5.3:64427141-64427160 None:intergenic 35.0%
AAGTTCAACGACTCTTTAGT+AGG - chr5.3:64426963-64426982 MS.gene29469:CDS 35.0%
ACCGAAGTTCCAAATTATCA+TGG + chr5.3:64427457-64427476 None:intergenic 35.0%
ATGGCCATGAATTCTCATAT+TGG - chr5.3:64426887-64426906 MS.gene29469:CDS 35.0%
ATTTGGAGAAGGTAAAGCAA+TGG + chr5.3:64428189-64428208 None:intergenic 35.0%
CACCTAAAGGATTAATGTGT+TGG + chr5.3:64427397-64427416 None:intergenic 35.0%
CTCCAAAAAGATTCACCTAA+AGG + chr5.3:64427410-64427429 None:intergenic 35.0%
GGTTAAGTCAAGATTCAAAG+AGG + chr5.3:64428168-64428187 None:intergenic 35.0%
TTGCTTTACCTTCTCCAAAT+AGG - chr5.3:64428189-64428208 MS.gene29469:CDS 35.0%
! ATATCCATATCCCTAGTCTT+AGG + chr5.3:64428239-64428258 None:intergenic 35.0%
! GAAAATCCAAGTTCGGTTTT+TGG + chr5.3:64427521-64427540 None:intergenic 35.0%
!! AAAACATCAACAAAGGTGCT+TGG - chr5.3:64426726-64426745 MS.gene29469:CDS 35.0%
AACTAATTACCAGCAGCCTT+GGG + chr5.3:64426821-64426840 None:intergenic 40.0%
AAGTTCATGGTGAAGGATGT+TGG - chr5.3:64426786-64426805 MS.gene29469:CDS 40.0%
ACAGTAGAAACATGAGGACT+AGG + chr5.3:64428020-64428039 None:intergenic 40.0%
AGTTCATGGTGAAGGATGTT+GGG - chr5.3:64426787-64426806 MS.gene29469:CDS 40.0%
ATCGTTGTGGCAAAAGTTGT+AGG - chr5.3:64427091-64427110 MS.gene29469:intron 40.0%
GCAAAAGTTGTAGGCTAAGA+TGG - chr5.3:64427100-64427119 MS.gene29469:intron 40.0%
TTACGACCAGATATCAAACG+TGG - chr5.3:64427132-64427151 MS.gene29469:intron 40.0%
! AGTCCTCATGTTTCTACTGT+GGG - chr5.3:64428020-64428039 MS.gene29469:intron 40.0%
! TAGTCCTCATGTTTCTACTG+TGG - chr5.3:64428019-64428038 MS.gene29469:intron 40.0%
!! GGGGAAGTACCATGATAATT+TGG - chr5.3:64427445-64427464 MS.gene29469:intron 40.0%
!!! ATCTTTTTGGAGTAAACCCC+AGG - chr5.3:64427418-64427437 MS.gene29469:intron 40.0%
!!! GTGCTTTTAAAACGACCGAT+AGG + chr5.3:64427250-64427269 None:intergenic 40.0%
ACCTCATTATCTGTACGTCC+GGG + chr5.3:64427912-64427931 None:intergenic 45.0%
ATCAAACTTCATGCCCTCCT+TGG - chr5.3:64427186-64427205 MS.gene29469:intron 45.0%
ATTGTGGGTCTCCTAAGACT+AGG - chr5.3:64428225-64428244 MS.gene29469:CDS 45.0%
CACCTCATTATCTGTACGTC+CGG + chr5.3:64427913-64427932 None:intergenic 45.0%
GAACTAATTACCAGCAGCCT+TGG + chr5.3:64426822-64426841 None:intergenic 45.0%
GTCTCCTAAGACTAGGGATA+TGG - chr5.3:64428232-64428251 MS.gene29469:CDS 45.0%
GTCTTAGGAGACCCACAATT+AGG + chr5.3:64428224-64428243 None:intergenic 45.0%
GTTCATGGTGAAGGATGTTG+GGG - chr5.3:64426788-64426807 MS.gene29469:CDS 45.0%
TGATTAGGGTTGCATCGTTG+TGG - chr5.3:64427078-64427097 MS.gene29469:intron 45.0%
TTGTGGGTCTCCTAAGACTA+GGG - chr5.3:64428226-64428245 MS.gene29469:CDS 45.0%
! AACTAGGGTACCTATTGCCA+AGG + chr5.3:64427206-64427225 None:intergenic 45.0%
!! GGGCATGAAGTTTGATGATG+AGG + chr5.3:64427182-64427201 None:intergenic 45.0%
ATGGTACTTCCCCAGTTCCT+GGG + chr5.3:64427438-64427457 None:intergenic 50.0%
ATTACCAGCAGCCTTGGGAA+TGG + chr5.3:64426816-64426835 None:intergenic 50.0%
ATTAGGTGGGCACTCATAGC+TGG - chr5.3:64427879-64427898 MS.gene29469:intron 50.0%
GTGCCCACAGTAGAAACATG+AGG + chr5.3:64428026-64428045 None:intergenic 50.0%
TGGAGTAAACCCCAGGAACT+GGG - chr5.3:64427425-64427444 MS.gene29469:intron 50.0%
TTCATGCCCTCCTTGGCAAT+AGG - chr5.3:64427193-64427212 MS.gene29469:intron 50.0%
TTGGAGTAAACCCCAGGAAC+TGG - chr5.3:64427424-64427443 MS.gene29469:intron 50.0%
! AGGGTACCTATTGCCAAGGA+GGG + chr5.3:64427202-64427221 None:intergenic 50.0%
! TAGGGTACCTATTGCCAAGG+AGG + chr5.3:64427203-64427222 None:intergenic 50.0%
ATGTTGGGGCTCCATTCCCA+AGG - chr5.3:64426802-64426821 MS.gene29469:CDS 55.0%
CATGGTACTTCCCCAGTTCC+TGG + chr5.3:64427439-64427458 None:intergenic 55.0%
CTCATAGCTGGAAGGTTGCC+CGG - chr5.3:64427891-64427910 MS.gene29469:intron 55.0%
GCCCGGACGTACAGATAATG+AGG - chr5.3:64427908-64427927 MS.gene29469:intron 55.0%
GGAGTAAACCCCAGGAACTG+GGG - chr5.3:64427426-64427445 MS.gene29469:intron 55.0%
GGGTGCATCACACGACTTGA+TGG + chr5.3:64428096-64428115 None:intergenic 55.0%
TGCTCGGGTCCTCCCTTATA+AGG - chr5.3:64427734-64427753 MS.gene29469:intron 55.0%
TGGTACTTCCCCAGTTCCTG+GGG + chr5.3:64427437-64427456 None:intergenic 55.0%
GGTGGGCACTCATAGCTGGA+AGG - chr5.3:64427883-64427902 MS.gene29469:intron 60.0%
GGCTCCATTCCCAAGGCTGC+TGG - chr5.3:64426809-64426828 MS.gene29469:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 64426701 64428274 64426701 ID=MS.gene29469
chr5.3 mRNA 64426701 64428274 64426701 ID=MS.gene29469.t1;Parent=MS.gene29469
chr5.3 exon 64428145 64428274 64428145 ID=MS.gene29469.t1.exon1;Parent=MS.gene29469.t1
chr5.3 CDS 64428145 64428274 64428145 ID=cds.MS.gene29469.t1;Parent=MS.gene29469.t1
chr5.3 exon 64427761 64427890 64427761 ID=MS.gene29469.t1.exon2;Parent=MS.gene29469.t1
chr5.3 CDS 64427761 64427890 64427761 ID=cds.MS.gene29469.t1;Parent=MS.gene29469.t1
chr5.3 exon 64426701 64427091 64426701 ID=MS.gene29469.t1.exon3;Parent=MS.gene29469.t1
chr5.3 CDS 64426701 64427091 64426701 ID=cds.MS.gene29469.t1;Parent=MS.gene29469.t1
Gene Sequence

>MS.gene29469

ATGAGAAAGCCTTGTTGTGACAAAGAAAACATCAACAAAGGTGCTTGGTCTAAGCAAGAAGATCAAAAGCTCATTGATTATATACAAGTTCATGGTGAAGGATGTTGGGGCTCCATTCCCAAGGCTGCTGGTAATTAGTTCATCATCTCATTGACTCATACTATATAATATCGTTCTTCTTAATTCATGGCCATGAATTCTCATATTGGTTCAATGGTTATTAAAATAGAGAAAATTTAAATTATTCCATCTTTGTTAATTCAAGTTCAACGACTCTTTAGTAGGTTTCGTAGTGTAACTCTTGCATATGATTCATATATATGTACACAAATTAAATGTCTAATGATTAAAAGTGTCTAATATGTGTATTATTATCATGATTAGGGTTGCATCGTTGTGGCAAAAGTTGTAGGCTAAGATGGTTAAACTACTTACGACCAGATATCAAACGTGGAATCTTTGCACAAGATGAAGAAGACCTCATCATCAAACTTCATGCCCTCCTTGGCAATAGGTACCCTAGTTTTCATTACAAGCTTTTATTTACCTATCGGTCGTTTTAAAAGCACGTTTCTCTTAGTCATGAATTAAAATAAATAGTGAATCATCATTTCTCTTAGTCATGAATTATATAGATTTTGATAATTCACTTTTGAAAGTTCTAATATAACTAGTATTAATGTTAAAAAATTTCCAACACATTAATCCTTTAGGTGAATCTTTTTGGAGTAAACCCCAGGAACTGGGGAAGTACCATGATAATTTGGAACTTCGGTTGAGAGTTAAGTAAAACCCACTTAAATTATATTTGTTTTATCCAAAAACCGAACTTGGATTTTCTCAAAGAATTTGTCATTTAAATAAGTCTATATAGTCTTCAAGTTGTTTTTAAAAGACTAATAACATTAAGATTTTTTTTAATTTTCAAATATTATTGTACAATTTCTTTTTTGTTTTGTTTTTGTTTTTATGTACTAAAGTTATGCAGTATATGTTTAAATGAAAAAAAAATTATAGTATTTAAATTAGTATATGCTCGGGTCCTCCCTTATAAGGAAATATGTTTGTCTTTGCTATCAATTTTAGTAATATCACCTTTTGGCAATGAATTTAACTTATAAAGTTGTACTCTTGATCCAAAAAATCTCATATAGTTCTACATGCATGTATGTATCTATATTAGGTGGGCACTCATAGCTGGAAGGTTGCCCGGACGTACAGATAATGAGGTGAAAAACTATTGGAATTCTCATATTCGTAGAAAGCTAATAAAAATGGGAATTGATCCAAACAATCACAAACTACACAAAGGCTTTCCTAGTCCTCATGTTTCTACTGTGGGCACATCATCATGTGTTGAGTCCATGAATAAAGAGAATAATAATAAACTCTCCATCAAGTCGTGTGATGCACCCATTAATAATGATCCAAAGAAAGATACTACATCAATAATTAATTCTTCATCCTCTTTGAATCTTGACTTAACCATTGCTTTACCTTCTCCAAATAGGATTGTTATACCTAATTGTGGGTCTCCTAAGACTAGGGATATGGATATTGATCTTAATTGTTAA
Protein sequence

>MS.gene29469.t1

MRKPCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWGSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAQDEEDLIIKLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKLHKGFPSPHVSTVGTSSCVESMNKENNNKLSIKSCDAPINNDPKKDTTSIINSSSSLNLDLTIALPSPNRIVIPNCGSPKTRDMDIDLNC