Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29495.t1 | XP_024639183.1 | 68.9 | 122 | 38 | 0 | 50 | 171 | 142 | 263 | 3.30E-38 | 168.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29495.t1 | G7KBS3 | 68.9 | 122 | 38 | 0 | 50 | 171 | 144 | 265 | 2.4e-38 | 168.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene29495.t1 | TF | C2C2-YABBY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29495.t1 | MTR_5g080030 | 74.797 | 123 | 31 | 0 | 50 | 172 | 144 | 266 | 2.08e-60 | 193 |
| MS.gene29495.t1 | MTR_5g080030 | 63.636 | 88 | 29 | 2 | 94 | 180 | 264 | 349 | 4.91e-25 | 100 |
| MS.gene29495.t1 | MTR_5g095070 | 62.500 | 136 | 38 | 3 | 49 | 180 | 131 | 257 | 2.40e-45 | 150 |
| MS.gene29495.t1 | MTR_1g084150 | 52.143 | 140 | 43 | 3 | 65 | 180 | 3 | 142 | 1.20e-32 | 117 |
| MS.gene29495.t1 | MTR_5g080040 | 91.837 | 49 | 4 | 0 | 1 | 49 | 1 | 49 | 1.34e-27 | 99.4 |
| MS.gene29495.t1 | MTR_5g080060 | 89.796 | 49 | 5 | 0 | 1 | 49 | 1 | 49 | 5.26e-27 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAATGGTTATGAAAT+TGG | 0.137150 | 5.3:+64705305 | None:intergenic |
| CAGACTCTTCAGTGCTCTTT+TGG | 0.248679 | 5.3:-64707225 | None:intergenic |
| CCTTAGTTTATCTCAATTAG+TGG | 0.324039 | 5.3:+64706217 | MS.gene29495:CDS |
| TTATATCCACTCTGACCTAT+TGG | 0.347768 | 5.3:-64706924 | None:intergenic |
| ATCCGACAACCGCTGTGTTT+TGG | 0.358584 | 5.3:-64705351 | None:intergenic |
| AAAGGAAAGCAAGGAGATAA+AGG | 0.375471 | 5.3:+64707180 | MS.gene29495:CDS |
| GACTACTCTAATCAAATTAC+TGG | 0.401984 | 5.3:+64706278 | MS.gene29495:CDS |
| CCACTAATTGAGATAAACTA+AGG | 0.402610 | 5.3:-64706217 | None:intergenic |
| TGGAGATTGAAGAAGGTTGC+CGG | 0.426728 | 5.3:+64705325 | MS.gene29495:CDS |
| GTTGTCAGACAAGGAGAAAC+AGG | 0.430794 | 5.3:+64707043 | MS.gene29495:CDS |
| ATGAAATTGGAGATTGAAGA+AGG | 0.432769 | 5.3:+64705318 | MS.gene29495:CDS |
| AAACGGAGACGTGCTCCAAT+AGG | 0.460049 | 5.3:+64706909 | MS.gene29495:CDS |
| TTTCATGTAGCCATATGAAA+AGG | 0.472708 | 5.3:+64707162 | MS.gene29495:intron |
| TCGTCTAAAAGCTGATCATC+AGG | 0.483966 | 5.3:+64706971 | MS.gene29495:CDS |
| CTTTCTAAGGTTCAGGTGAA+AGG | 0.489642 | 5.3:+64706180 | MS.gene29495:intron |
| GGTTTATTCAACGAAGAAGA+AGG | 0.495785 | 5.3:+64705419 | MS.gene29495:CDS |
| TTCTTCGTTGAATAAACCAC+CGG | 0.508962 | 5.3:-64705414 | None:intergenic |
| CACCAAAACACAGCGGTTGT+CGG | 0.521171 | 5.3:+64705349 | MS.gene29495:CDS |
| ATAACAAAGAAAAGAAGAAA+CGG | 0.522686 | 5.3:+64706892 | MS.gene29495:CDS |
| GACGAGCACATTCCTGCTTG+AGG | 0.523607 | 5.3:-64706953 | None:intergenic |
| TAGACATGGCTATTGATGCT+TGG | 0.537672 | 5.3:+64707015 | MS.gene29495:CDS |
| GAAGAAGAAGGCCCCACCGA+AGG | 0.545060 | 5.3:+64705431 | MS.gene29495:CDS |
| GGATTGAAGTAACCATCCTT+CGG | 0.555826 | 5.3:-64705447 | None:intergenic |
| GCCATATGAAAAGGAAAGCA+AGG | 0.558682 | 5.3:+64707171 | MS.gene29495:intron |
| TGAAGTAACCATCCTTCGGT+GGG | 0.570885 | 5.3:-64705443 | None:intergenic |
| AAGAAGGCCCCACCGAAGGA+TGG | 0.585344 | 5.3:+64705435 | MS.gene29495:CDS |
| ATATAATATATTCCTCAAGC+AGG | 0.589592 | 5.3:+64706941 | MS.gene29495:CDS |
| CAATGAAGATTATGCAAAGG+TGG | 0.590284 | 5.3:+64706241 | MS.gene29495:CDS |
| GCTGATCATCAGGACATATG+TGG | 0.590919 | 5.3:+64706981 | MS.gene29495:CDS |
| GCCGAGGGACACATAGTCGC+CGG | 0.592623 | 5.3:-64705378 | None:intergenic |
| TTGAAGTAACCATCCTTCGG+TGG | 0.600524 | 5.3:-64705444 | None:intergenic |
| TGGCAGAGAAATTGTAGACA+TGG | 0.605105 | 5.3:+64707001 | MS.gene29495:CDS |
| GCCGGCGACTATGTGTCCCT+CGG | 0.606069 | 5.3:+64705377 | MS.gene29495:CDS |
| CAGCGGTTGTCGGATACCGC+CGG | 0.619908 | 5.3:+64705359 | MS.gene29495:CDS |
| CACTAATTGAGATAAACTAA+GGG | 0.621885 | 5.3:-64706216 | None:intergenic |
| AATTTGATTAGAGTAGTCCT+CGG | 0.623111 | 5.3:-64706273 | None:intergenic |
| GGACAATGAAGATTATGCAA+AGG | 0.624602 | 5.3:+64706238 | MS.gene29495:CDS |
| TTGGAACAAGTTGTCAGACA+AGG | 0.660817 | 5.3:+64707034 | MS.gene29495:CDS |
| GAAGTAACCATCCTTCGGTG+GGG | 0.675290 | 5.3:-64705442 | None:intergenic |
| CGTGCTCCAATAGGTCAGAG+TGG | 0.690376 | 5.3:+64706918 | MS.gene29495:CDS |
| AAAGGTGGCAAAGATATCCG+AGG | 0.717174 | 5.3:+64706256 | MS.gene29495:CDS |
| GAGGGACACATAGTCGCCGG+CGG | 0.725760 | 5.3:-64705375 | None:intergenic |
| TGCCGGACACCAAAACACAG+CGG | 0.804931 | 5.3:+64705342 | MS.gene29495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAAAGCAAAAATTAT+TGG | - | chr5.3:64705758-64705777 | None:intergenic | 15.0% |
| !!! | TATAATTTTACTTGACTAAT+TGG | + | chr5.3:64706087-64706106 | MS.gene29495:intron | 15.0% |
| !!! | TTATGATACTTATTTTGAAT+CGG | - | chr5.3:64706411-64706430 | None:intergenic | 15.0% |
| !! | ACATGAAAAGTAATTAGAAA+TGG | - | chr5.3:64707150-64707169 | None:intergenic | 20.0% |
| !! | ATAACAAAGAAAAGAAGAAA+CGG | + | chr5.3:64706892-64706911 | MS.gene29495:CDS | 20.0% |
| !! | ATCATAACAGAATACAAATT+TGG | + | chr5.3:64706424-64706443 | MS.gene29495:intron | 20.0% |
| !! | CATGTAATTGAAATATGAAA+TGG | + | chr5.3:64705611-64705630 | MS.gene29495:intron | 20.0% |
| !! | TAAATACATAAAGTAGCAAA+CGG | - | chr5.3:64706507-64706526 | None:intergenic | 20.0% |
| !!! | AAGGATATACAGTTTTATAT+AGG | + | chr5.3:64706040-64706059 | MS.gene29495:intron | 20.0% |
| !!! | ATAAAGATACAATTTTTACG+AGG | + | chr5.3:64706303-64706322 | MS.gene29495:intron | 20.0% |
| !!! | TAAAGATACAATTTTTACGA+GGG | + | chr5.3:64706304-64706323 | MS.gene29495:intron | 20.0% |
| !!! | TTCTTTTCTTTGTTATTTGT+GGG | - | chr5.3:64706888-64706907 | None:intergenic | 20.0% |
| ! | ATATAATATATTCCTCAAGC+AGG | + | chr5.3:64706941-64706960 | MS.gene29495:CDS | 25.0% |
| ! | ATCAAAATCTGCAAAGAAAT+TGG | - | chr5.3:64706637-64706656 | None:intergenic | 25.0% |
| ! | CACTAATTGAGATAAACTAA+GGG | - | chr5.3:64706219-64706238 | None:intergenic | 25.0% |
| ! | TAAAAATAAGCTCCAAATCA+GGG | - | chr5.3:64705473-64705492 | None:intergenic | 25.0% |
| !! | ATTTGTTGAAAGAGTTTAAC+GGG | + | chr5.3:64706550-64706569 | MS.gene29495:intron | 25.0% |
| !!! | AGCTACTTTTAATCTGAATT+TGG | - | chr5.3:64706772-64706791 | None:intergenic | 25.0% |
| !!! | CTTCTTTTCTTTGTTATTTG+TGG | - | chr5.3:64706889-64706908 | None:intergenic | 25.0% |
| !!! | GATTTGTTGAAAGAGTTTAA+CGG | + | chr5.3:64706549-64706568 | MS.gene29495:intron | 25.0% |
| !!! | TTATTGGTTTATAATTGCTG+TGG | - | chr5.3:64705742-64705761 | None:intergenic | 25.0% |
| !!! | TTTTAGAGTTTTGCCTATAA+AGG | + | chr5.3:64705488-64705507 | MS.gene29495:intron | 25.0% |
| AAAAATAAGCTCCAAATCAG+GGG | - | chr5.3:64705472-64705491 | None:intergenic | 30.0% | |
| AACAGGTACAGTAAATGAAT+TGG | + | chr5.3:64707060-64707079 | MS.gene29495:intron | 30.0% | |
| AATTTGATTAGAGTAGTCCT+CGG | - | chr5.3:64706276-64706295 | None:intergenic | 30.0% | |
| ACACTTCAAATTAAATACCC+AGG | - | chr5.3:64705877-64705896 | None:intergenic | 30.0% | |
| ACCTTAAATTCTCCTTTCTA+AGG | + | chr5.3:64706167-64706186 | MS.gene29495:intron | 30.0% | |
| ACCTTAGAAAGGAGAATTTA+AGG | - | chr5.3:64706171-64706190 | None:intergenic | 30.0% | |
| ATCAAATTCTTCTACCTGTT+AGG | + | chr5.3:64705922-64705941 | MS.gene29495:intron | 30.0% | |
| ATGAAATTGGAGATTGAAGA+AGG | + | chr5.3:64705318-64705337 | MS.gene29495:CDS | 30.0% | |
| CACTTCAAATTAAATACCCA+GGG | - | chr5.3:64705876-64705895 | None:intergenic | 30.0% | |
| CATTGACAAAAAAAAAAGCG+TGG | + | chr5.3:64705667-64705686 | MS.gene29495:intron | 30.0% | |
| CCACTAATTGAGATAAACTA+AGG | - | chr5.3:64706220-64706239 | None:intergenic | 30.0% | |
| CCTTAGTTTATCTCAATTAG+TGG | + | chr5.3:64706217-64706236 | MS.gene29495:CDS | 30.0% | |
| CTAAAAATAAGCTCCAAATC+AGG | - | chr5.3:64705474-64705493 | None:intergenic | 30.0% | |
| GACTACTCTAATCAAATTAC+TGG | + | chr5.3:64706278-64706297 | MS.gene29495:CDS | 30.0% | |
| TGAGAGCAACTAAAAATTTG+TGG | - | chr5.3:64705593-64705612 | None:intergenic | 30.0% | |
| TTAGATTCCCTTTCCTTTAT+AGG | - | chr5.3:64705504-64705523 | None:intergenic | 30.0% | |
| TTTCATGTAGCCATATGAAA+AGG | + | chr5.3:64707162-64707181 | MS.gene29495:intron | 30.0% | |
| TTTGGATTCTTACTTAAAGC+AGG | + | chr5.3:64706825-64706844 | MS.gene29495:intron | 30.0% | |
| ! | AGTTTTGCCTATAAAGGAAA+GGG | + | chr5.3:64705494-64705513 | MS.gene29495:intron | 30.0% |
| ! | TAAAACACGAGTTTGAAGTA+TGG | + | chr5.3:64706672-64706691 | MS.gene29495:intron | 30.0% |
| !! | GGGTATTTAATTTGAAGTGT+CGG | + | chr5.3:64705877-64705896 | MS.gene29495:intron | 30.0% |
| !! | TTTGAAGTGTCGGTTTATAT+AGG | + | chr5.3:64705887-64705906 | MS.gene29495:intron | 30.0% |
| AAAACTGTATATCCTTGCAG+TGG | - | chr5.3:64706036-64706055 | None:intergenic | 35.0% | |
| AAAATAAGCTCCAAATCAGG+GGG | - | chr5.3:64705471-64705490 | None:intergenic | 35.0% | |
| AAAGGAAAGCAAGGAGATAA+AGG | + | chr5.3:64707180-64707199 | MS.gene29495:CDS | 35.0% | |
| ACCAAAATCAACCATATCGT+TGG | + | chr5.3:64706589-64706608 | MS.gene29495:intron | 35.0% | |
| AGTAACCAAAGTGAATCGAT+CGG | - | chr5.3:64706463-64706482 | None:intergenic | 35.0% | |
| ATATGTATGTGTTAGACCCT+GGG | + | chr5.3:64705857-64705876 | MS.gene29495:intron | 35.0% | |
| CAATGAAGATTATGCAAAGG+TGG | + | chr5.3:64706241-64706260 | MS.gene29495:CDS | 35.0% | |
| GGACAATGAAGATTATGCAA+AGG | + | chr5.3:64706238-64706257 | MS.gene29495:CDS | 35.0% | |
| GGTTTATTCAACGAAGAAGA+AGG | + | chr5.3:64705419-64705438 | MS.gene29495:CDS | 35.0% | |
| TGAAAGAGTTTAACGGGATT+TGG | + | chr5.3:64706556-64706575 | MS.gene29495:intron | 35.0% | |
| TGACACTCTAATAACCTAAC+AGG | - | chr5.3:64705939-64705958 | None:intergenic | 35.0% | |
| TTATATCCACTCTGACCTAT+TGG | - | chr5.3:64706927-64706946 | None:intergenic | 35.0% | |
| TTCTTACTTAAAGCAGGAGT+TGG | + | chr5.3:64706831-64706850 | MS.gene29495:intron | 35.0% | |
| TTCTTCGTTGAATAAACCAC+CGG | - | chr5.3:64705417-64705436 | None:intergenic | 35.0% | |
| TTGATCTTATTACCACTGCA+AGG | + | chr5.3:64706021-64706040 | MS.gene29495:intron | 35.0% | |
| ! | CATAAAGTAGCAAACGGTTT+TGG | - | chr5.3:64706501-64706520 | None:intergenic | 35.0% |
| ! | GACAAAAAAAAAAGCGTGGT+AGG | + | chr5.3:64705671-64705690 | MS.gene29495:intron | 35.0% |
| ! | GAGTTTTGCCTATAAAGGAA+AGG | + | chr5.3:64705493-64705512 | MS.gene29495:intron | 35.0% |
| ! | TCCTTGCTTTCCTTTTCATA+TGG | - | chr5.3:64707175-64707194 | None:intergenic | 35.0% |
| !! | AATTCTCCTTTCTAAGGTTC+AGG | + | chr5.3:64706173-64706192 | MS.gene29495:intron | 35.0% |
| !! | ACCAACGATATGGTTGATTT+TGG | - | chr5.3:64706593-64706612 | None:intergenic | 35.0% |
| CTTTCACCTGAACCTTAGAA+AGG | - | chr5.3:64706182-64706201 | None:intergenic | 40.0% | |
| GATATGTATGTGTTAGACCC+TGG | + | chr5.3:64705856-64705875 | MS.gene29495:intron | 40.0% | |
| GCCATATGAAAAGGAAAGCA+AGG | + | chr5.3:64707171-64707190 | MS.gene29495:intron | 40.0% | |
| GGATTGAAGTAACCATCCTT+CGG | - | chr5.3:64705450-64705469 | None:intergenic | 40.0% | |
| GTGCTTATGCTGCAATACTT+TGG | + | chr5.3:64706807-64706826 | MS.gene29495:intron | 40.0% | |
| TAGACATGGCTATTGATGCT+TGG | + | chr5.3:64707015-64707034 | MS.gene29495:CDS | 40.0% | |
| TCGTCTAAAAGCTGATCATC+AGG | + | chr5.3:64706971-64706990 | MS.gene29495:CDS | 40.0% | |
| TCTGCAAAGAAATTGGACCA+CGG | - | chr5.3:64706630-64706649 | None:intergenic | 40.0% | |
| TGGCAGAGAAATTGTAGACA+TGG | + | chr5.3:64707001-64707020 | MS.gene29495:CDS | 40.0% | |
| TGTTCGAATCACCAACGATA+TGG | - | chr5.3:64706603-64706622 | None:intergenic | 40.0% | |
| TTACTTCAATCCCCCTGATT+TGG | + | chr5.3:64705458-64705477 | MS.gene29495:intron | 40.0% | |
| TTGGAACAAGTTGTCAGACA+AGG | + | chr5.3:64707034-64707053 | MS.gene29495:CDS | 40.0% | |
| ! | AAAAAAAAGCGTGGTAGGTG+TGG | + | chr5.3:64705676-64705695 | MS.gene29495:intron | 40.0% |
| !! | CTTTCTAAGGTTCAGGTGAA+AGG | + | chr5.3:64706180-64706199 | MS.gene29495:intron | 40.0% |
| !!! | TAAACCACCGGCTTCTTTTT+CGG | - | chr5.3:64705405-64705424 | None:intergenic | 40.0% |
| AAAGGTGGCAAAGATATCCG+AGG | + | chr5.3:64706256-64706275 | MS.gene29495:CDS | 45.0% | |
| AGTAGCTCGTGTGAATTCAG+AGG | + | chr5.3:64706785-64706804 | MS.gene29495:intron | 45.0% | |
| CTTGAGTAATGCCTACACTG+AGG | + | chr5.3:64705959-64705978 | MS.gene29495:intron | 45.0% | |
| GAGACACATATCCTCAGTGT+AGG | - | chr5.3:64705973-64705992 | None:intergenic | 45.0% | |
| GCTGATCATCAGGACATATG+TGG | + | chr5.3:64706981-64707000 | MS.gene29495:CDS | 45.0% | |
| GTTGTCAGACAAGGAGAAAC+AGG | + | chr5.3:64707043-64707062 | MS.gene29495:CDS | 45.0% | |
| TGAAGTAACCATCCTTCGGT+GGG | - | chr5.3:64705446-64705465 | None:intergenic | 45.0% | |
| TGGAGATTGAAGAAGGTTGC+CGG | + | chr5.3:64705325-64705344 | MS.gene29495:CDS | 45.0% | |
| TTGAAGTAACCATCCTTCGG+TGG | - | chr5.3:64705447-64705466 | None:intergenic | 45.0% | |
| ! | CACAACCGATCGATTCACTT+TGG | + | chr5.3:64706455-64706474 | MS.gene29495:intron | 45.0% |
| ! | CAGACTCTTCAGTGCTCTTT+TGG | - | chr5.3:64707228-64707247 | None:intergenic | 45.0% |
| AAACGGAGACGTGCTCCAAT+AGG | + | chr5.3:64706909-64706928 | MS.gene29495:CDS | 50.0% | |
| CACCAAAACACAGCGGTTGT+CGG | + | chr5.3:64705349-64705368 | MS.gene29495:CDS | 50.0% | |
| CTGTACGCAGTCAAGCACAT+CGG | - | chr5.3:64706724-64706743 | None:intergenic | 50.0% | |
| GAAGTAACCATCCTTCGGTG+GGG | - | chr5.3:64705445-64705464 | None:intergenic | 50.0% | |
| GGTGATTCGAACAAGATCCG+TGG | + | chr5.3:64706610-64706629 | MS.gene29495:intron | 50.0% | |
| TGCTTGACTGCGTACAGTCA+CGG | + | chr5.3:64706727-64706746 | MS.gene29495:intron | 50.0% | |
| TGTACGCAGTCAAGCACATC+GGG | - | chr5.3:64706723-64706742 | None:intergenic | 50.0% | |
| ! | ATCCGACAACCGCTGTGTTT+TGG | - | chr5.3:64705354-64705373 | None:intergenic | 50.0% |
| !!! | AACCGCTGTGTTTTGGTGTC+CGG | - | chr5.3:64705347-64705366 | None:intergenic | 50.0% |
| CGTGCTCCAATAGGTCAGAG+TGG | + | chr5.3:64706918-64706937 | MS.gene29495:CDS | 55.0% | |
| GACGAGCACATTCCTGCTTG+AGG | - | chr5.3:64706956-64706975 | None:intergenic | 55.0% | |
| GCTTGACTGCGTACAGTCAC+GGG | + | chr5.3:64706728-64706747 | MS.gene29495:intron | 55.0% | |
| GGGGGTCGTTCGATCAAGAT+GGG | - | chr5.3:64706703-64706722 | None:intergenic | 55.0% | |
| GTACGCAGTCAAGCACATCG+GGG | - | chr5.3:64706722-64706741 | None:intergenic | 55.0% | |
| GTCGTTCGATCAAGATGGGC+TGG | - | chr5.3:64706699-64706718 | None:intergenic | 55.0% | |
| TACGCAGTCAAGCACATCGG+GGG | - | chr5.3:64706721-64706740 | None:intergenic | 55.0% | |
| TGCCGGACACCAAAACACAG+CGG | + | chr5.3:64705342-64705361 | MS.gene29495:CDS | 55.0% | |
| ! | AGTCACGGGAGTGTGACTTC+TGG | + | chr5.3:64706742-64706761 | MS.gene29495:intron | 55.0% |
| ! | CTCGGCACCGAAAAAGAAGC+CGG | + | chr5.3:64705395-64705414 | MS.gene29495:CDS | 55.0% |
| !!! | GGCTTCTTTTTCGGTGCCGA+GGG | - | chr5.3:64705396-64705415 | None:intergenic | 55.0% |
| AAGAAGGCCCCACCGAAGGA+TGG | + | chr5.3:64705435-64705454 | MS.gene29495:CDS | 60.0% | |
| CGGGGGTCGTTCGATCAAGA+TGG | - | chr5.3:64706704-64706723 | None:intergenic | 60.0% | |
| GAAGAAGAAGGCCCCACCGA+AGG | + | chr5.3:64705431-64705450 | MS.gene29495:CDS | 60.0% | |
| ! | GGCACCGAAAAAGAAGCCGG+TGG | + | chr5.3:64705398-64705417 | MS.gene29495:CDS | 60.0% |
| !!! | CGGCTTCTTTTTCGGTGCCG+AGG | - | chr5.3:64705397-64705416 | None:intergenic | 60.0% |
| CAGCGGTTGTCGGATACCGC+CGG | + | chr5.3:64705359-64705378 | MS.gene29495:CDS | 65.0% | |
| GAGGGACACATAGTCGCCGG+CGG | - | chr5.3:64705378-64705397 | None:intergenic | 65.0% | |
| GCCGAGGGACACATAGTCGC+CGG | - | chr5.3:64705381-64705400 | None:intergenic | 65.0% | |
| GCCGGCGACTATGTGTCCCT+CGG | + | chr5.3:64705377-64705396 | MS.gene29495:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 64705312 | 64707252 | 64705312 | ID=MS.gene29495 |
| chr5.3 | mRNA | 64705312 | 64707252 | 64705312 | ID=MS.gene29495.t1;Parent=MS.gene29495 |
| chr5.3 | exon | 64705312 | 64705456 | 64705312 | ID=MS.gene29495.t1.exon1;Parent=MS.gene29495.t1 |
| chr5.3 | CDS | 64705312 | 64705456 | 64705312 | ID=cds.MS.gene29495.t1;Parent=MS.gene29495.t1 |
| chr5.3 | exon | 64706195 | 64706299 | 64706195 | ID=MS.gene29495.t1.exon2;Parent=MS.gene29495.t1 |
| chr5.3 | CDS | 64706195 | 64706299 | 64706195 | ID=cds.MS.gene29495.t1;Parent=MS.gene29495.t1 |
| chr5.3 | exon | 64706847 | 64707064 | 64706847 | ID=MS.gene29495.t1.exon3;Parent=MS.gene29495.t1 |
| chr5.3 | CDS | 64706847 | 64707064 | 64706847 | ID=cds.MS.gene29495.t1;Parent=MS.gene29495.t1 |
| chr5.3 | exon | 64707172 | 64707252 | 64707172 | ID=MS.gene29495.t1.exon4;Parent=MS.gene29495.t1 |
| chr5.3 | CDS | 64707172 | 64707252 | 64707172 | ID=cds.MS.gene29495.t1;Parent=MS.gene29495.t1 |
| Gene Sequence |
| Protein sequence |
