AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29649

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29649.t1 MTR_5g082700 89.621 713 19 3 1 659 1 712 0.0 1301
MS.gene29649.t1 MTR_5g082700 89.127 653 16 3 1 599 1 652 0.0 1178
MS.gene29649.t1 MTR_5g082700 88.284 606 16 3 1 552 1 605 0.0 1080
MS.gene29649.t1 MTR_6g074905 61.631 331 103 2 334 659 860 1171 1.47e-139 437
MS.gene29649.t1 MTR_0349s0030 67.932 237 76 0 423 659 55 291 9.38e-117 351
MS.gene29649.t1 MTR_6g074870 53.312 317 107 5 293 604 67 347 4.59e-104 320
MS.gene29649.t1 MTR_6g074640 38.050 318 96 9 352 659 11 237 1.21e-51 179
MS.gene29649.t1 MTR_6g074750 79.000 100 21 0 457 556 18 117 2.76e-51 173
MS.gene29649.t1 MTR_8g069620 54.430 158 50 1 342 477 14 171 2.11e-45 160
MS.gene29649.t1 MTR_8g070930 32.578 353 160 9 371 653 138 482 6.92e-42 163
MS.gene29649.t1 MTR_1g111180 32.219 329 174 8 367 653 671 992 7.86e-41 160
MS.gene29649.t1 MTR_1g111180 32.219 329 174 8 367 653 670 991 8.44e-41 160
MS.gene29649.t1 MTR_3g109390 29.080 337 187 4 364 652 44 376 2.54e-39 149
MS.gene29649.t1 MTR_3g109390 29.080 337 187 4 364 652 66 398 2.78e-39 149
MS.gene29649.t1 MTR_3g109390 29.377 337 184 5 364 652 66 396 2.17e-38 147
MS.gene29649.t1 MTR_4g104620 28.701 331 183 6 368 649 94 420 1.55e-36 142
MS.gene29649.t1 MTR_3g109390 29.664 327 176 5 374 650 61 383 2.89e-36 140
MS.gene29649.t1 MTR_3g109390 29.664 327 176 5 374 650 83 405 4.79e-36 140
MS.gene29649.t1 MTR_4g104620 28.972 321 175 6 378 649 1 317 7.36e-35 135
MS.gene29649.t1 MTR_4g104620 28.972 321 175 6 378 649 10 326 9.21e-35 135
MS.gene29649.t1 MTR_3g076540 28.571 336 187 7 364 650 86 417 1.72e-33 133
MS.gene29649.t1 MTR_3g076540 28.443 334 186 7 368 652 8 337 2.77e-33 131
MS.gene29649.t1 MTR_3g076540 28.571 322 177 7 378 650 1 318 9.82e-32 126
MS.gene29649.t1 MTR_3g086530 26.901 342 195 6 363 653 84 421 2.12e-31 127
MS.gene29649.t1 MTR_3g086530 28.727 275 146 4 363 591 84 354 5.91e-31 125
MS.gene29649.t1 MTR_3g076540 27.746 346 189 8 364 652 86 427 7.94e-31 126
MS.gene29649.t1 MTR_3g109390 30.153 262 136 3 364 582 66 323 6.04e-30 121
MS.gene29649.t1 MTR_4g117490 28.485 330 165 11 369 657 22 321 2.13e-28 120
MS.gene29649.t1 MTR_3g086530 27.687 307 167 6 398 653 2 304 3.63e-28 115
MS.gene29649.t1 MTR_4g117490 28.485 330 165 11 369 657 22 321 7.14e-28 118
MS.gene29649.t1 MTR_5g091680 29.091 330 163 10 369 657 19 318 1.06e-27 117
MS.gene29649.t1 MTR_5g091680 29.091 330 163 10 369 657 19 318 1.09e-27 117
MS.gene29649.t1 MTR_5g091680 29.091 330 163 10 369 657 17 316 1.26e-27 117
MS.gene29649.t1 MTR_5g091680 29.091 330 163 10 369 657 19 318 1.43e-27 117
MS.gene29649.t1 MTR_2g021330 28.399 331 164 12 369 657 22 321 2.35e-27 115
MS.gene29649.t1 MTR_2g021330 28.399 331 164 12 369 657 22 321 3.04e-27 117
MS.gene29649.t1 MTR_3g089510 29.129 333 159 11 369 657 22 321 5.46e-27 116
MS.gene29649.t1 MTR_3g089510 29.129 333 159 11 369 657 10 309 6.06e-27 116
MS.gene29649.t1 MTR_7g110060 28.750 320 152 10 372 651 75 358 1.71e-26 112
MS.gene29649.t1 MTR_6g079470 30.488 328 151 12 369 652 86 380 1.75e-26 114
MS.gene29649.t1 MTR_1g086370 28.660 321 153 10 372 652 42 326 2.54e-26 111
MS.gene29649.t1 MTR_1g086370 28.750 320 152 10 372 651 75 358 2.82e-26 112
MS.gene29649.t1 MTR_8g106960 27.640 322 168 10 369 652 115 409 4.46e-26 113
MS.gene29649.t1 MTR_2g072840 27.859 341 175 11 358 657 11 321 4.87e-26 113
MS.gene29649.t1 MTR_4g087620 28.571 308 167 9 378 656 61 344 5.29e-26 110
MS.gene29649.t1 MTR_8g432510 26.757 370 184 12 339 653 87 424 6.17e-26 112
MS.gene29649.t1 MTR_8g106960 27.640 322 168 10 369 652 115 409 6.66e-26 113
MS.gene29649.t1 MTR_3g086530 29.185 233 115 4 363 549 84 312 8.74e-26 108
MS.gene29649.t1 MTR_2g072840 27.859 341 175 11 358 657 11 321 1.20e-25 111
MS.gene29649.t1 MTR_3g086530 29.644 253 144 5 431 653 1 249 1.53e-25 106
MS.gene29649.t1 MTR_8g461040 28.182 330 166 10 369 657 23 322 2.19e-25 111
MS.gene29649.t1 MTR_7g076030 27.346 373 211 14 307 652 86 425 4.03e-25 109
MS.gene29649.t1 MTR_1g084760 27.726 321 156 10 372 652 75 359 6.45e-25 108
MS.gene29649.t1 MTR_3g112210 27.760 317 174 10 371 656 31 323 3.55e-24 105
MS.gene29649.t1 MTR_4g061320 28.205 312 166 10 378 657 46 331 3.97e-24 105
MS.gene29649.t1 MTR_7g076030 28.618 304 169 11 372 649 34 315 9.12e-24 103
MS.gene29649.t1 MTR_8g098845 27.742 310 172 11 378 658 58 344 1.27e-23 103
MS.gene29649.t1 MTR_2g016490 27.445 317 162 10 372 652 40 324 1.36e-23 103
MS.gene29649.t1 MTR_7g110060 28.205 312 148 10 372 643 75 350 1.47e-23 103
MS.gene29649.t1 MTR_8g086000 28.631 241 137 7 425 656 109 323 2.50e-23 102
MS.gene29649.t1 MTR_8g086000 28.631 241 137 7 425 656 152 366 2.68e-23 103
MS.gene29649.t1 MTR_8g071230 28.013 307 178 10 371 656 3 287 2.71e-23 103
MS.gene29649.t1 MTR_2g083940 28.037 321 155 11 372 652 34 318 3.94e-23 102
MS.gene29649.t1 MTR_2g083940 28.037 321 155 11 372 652 88 372 4.71e-23 102
MS.gene29649.t1 MTR_2g005620 28.660 321 152 12 373 652 90 374 5.37e-23 102
MS.gene29649.t1 MTR_6g074670 48.454 97 50 0 543 639 26 122 6.16e-23 95.1
MS.gene29649.t1 MTR_5g026960 28.339 307 177 10 371 656 3 287 9.36e-23 102
MS.gene29649.t1 MTR_8g028720 26.710 307 175 9 378 656 43 327 9.39e-23 100
MS.gene29649.t1 MTR_8g012450 29.221 308 169 12 372 655 4 286 1.56e-22 100
MS.gene29649.t1 MTR_7g078690 27.036 307 174 9 378 656 44 328 1.63e-22 100
MS.gene29649.t1 MTR_8g012450 29.221 308 169 12 372 655 4 286 1.67e-22 101
MS.gene29649.t1 MTR_5g010030 27.922 308 170 10 378 656 47 331 1.74e-22 100
MS.gene29649.t1 MTR_2g072840 29.150 247 134 8 425 657 12 231 2.64e-22 101
MS.gene29649.t1 MTR_1g086370 30.579 242 114 8 428 651 34 239 1.98e-21 95.5
MS.gene29649.t1 MTR_3g460950 25.000 316 177 10 371 653 31 319 2.14e-21 97.1
MS.gene29649.t1 MTR_3g060330 25.000 316 177 10 371 653 31 319 2.14e-21 97.1
MS.gene29649.t1 MTR_4g087620 32.039 206 105 7 378 556 61 258 2.27e-20 92.0
MS.gene29649.t1 MTR_4g007750 26.769 325 183 11 371 658 3 309 2.49e-20 92.8
MS.gene29649.t1 MTR_4g103810 27.742 310 179 10 372 652 218 511 4.46e-20 94.7
MS.gene29649.t1 MTR_4g103810 27.742 310 179 10 372 652 108 401 1.15e-19 92.4
MS.gene29649.t1 MTR_3g085650 30.833 240 144 9 422 655 487 710 1.38e-19 94.0
MS.gene29649.t1 MTR_3g085650 30.833 240 144 9 422 655 487 710 1.65e-19 93.6
MS.gene29649.t1 MTR_3g085650 30.833 240 144 9 422 655 487 710 1.65e-19 93.6
MS.gene29649.t1 MTR_4g056390 31.953 169 101 5 493 653 317 479 3.33e-19 92.0
MS.gene29649.t1 MTR_5g024270 30.723 166 102 4 497 653 254 415 3.61e-19 91.3
MS.gene29649.t1 MTR_1g075610 26.059 307 175 9 376 651 22 307 6.59e-19 88.6
MS.gene29649.t1 MTR_3g098760 27.119 295 173 7 378 649 103 378 6.86e-19 90.9
MS.gene29649.t1 MTR_4g094430 25.828 302 181 9 371 649 3 284 3.04e-18 86.3
MS.gene29649.t1 MTR_2g084555 32.544 169 100 6 493 653 316 478 3.32e-18 89.0
MS.gene29649.t1 MTR_8g073250 31.098 164 101 4 497 652 251 410 5.34e-18 87.4
MS.gene29649.t1 MTR_2g085200 27.986 293 169 9 378 647 140 413 6.81e-18 88.2
MS.gene29649.t1 MTR_4g118780 26.059 307 185 8 364 647 96 383 1.96e-17 86.7
MS.gene29649.t1 MTR_5g008860 26.756 299 165 11 378 647 146 419 2.47e-17 86.3
MS.gene29649.t1 MTR_7g011800 26.280 293 175 9 378 647 126 400 2.52e-17 86.7
MS.gene29649.t1 MTR_1g061690 29.775 178 111 5 484 653 308 479 2.53e-17 86.3
MS.gene29649.t1 MTR_2g032060 25.000 304 181 10 371 649 3 284 3.00e-17 83.2
MS.gene29649.t1 MTR_4g061130 27.273 308 157 12 378 656 45 314 4.85e-17 83.6
MS.gene29649.t1 MTR_3g460980 26.000 300 164 12 371 653 31 289 4.87e-17 83.6
MS.gene29649.t1 MTR_8g099770 29.032 217 127 6 378 571 96 308 6.24e-17 84.7
MS.gene29649.t1 MTR_1g090917 27.727 220 125 6 379 568 58 273 6.56e-17 84.7
MS.gene29649.t1 MTR_3g060390 26.014 296 165 12 371 653 31 285 6.66e-17 82.8
MS.gene29649.t1 MTR_4g109090 25.510 294 175 9 378 647 111 384 7.45e-17 85.1
MS.gene29649.t1 MTR_1g090917 27.727 220 125 6 379 568 58 273 7.88e-17 84.3
MS.gene29649.t1 MTR_5g075100 27.215 316 153 14 370 659 21 285 1.05e-16 83.6
MS.gene29649.t1 MTR_7g072575 31.250 224 131 9 365 568 5 225 2.04e-16 82.8
MS.gene29649.t1 MTR_3g096960 28.926 242 144 9 425 649 95 325 2.74e-16 82.4
MS.gene29649.t1 MTR_6g080470 26.490 302 182 11 368 649 10 291 2.75e-16 82.0
MS.gene29649.t1 MTR_1g048630 26.493 268 156 8 371 605 6 265 4.17e-16 83.2
MS.gene29649.t1 MTR_1g105290 27.244 312 158 11 371 656 54 322 7.67e-16 81.3
MS.gene29649.t1 MTR_1g105290 27.244 312 158 11 371 656 54 322 8.08e-16 81.6
MS.gene29649.t1 MTR_1g105290 27.244 312 158 11 371 656 54 322 8.45e-16 81.6
MS.gene29649.t1 MTR_8g086380 30.734 218 127 9 366 561 20 235 9.47e-16 80.9
MS.gene29649.t1 MTR_8g092290 30.275 218 123 8 378 571 147 359 1.53e-15 80.5
MS.gene29649.t1 MTR_6g013030 26.557 305 176 11 369 647 107 389 2.33e-15 80.1
MS.gene29649.t1 MTR_8g080190 36.496 137 76 4 422 554 456 585 5.81e-15 79.0
MS.gene29649.t1 MTR_4g131060 27.234 235 137 8 358 566 4 230 7.35e-15 77.8
MS.gene29649.t1 MTR_1g081870 29.493 217 126 7 378 571 128 340 1.31e-14 77.8
MS.gene29649.t1 MTR_4g029020 28.125 224 138 6 365 568 5 225 1.47e-14 77.0
MS.gene29649.t1 MTR_1g040875 28.054 221 136 7 367 566 19 237 1.48e-14 76.6
MS.gene29649.t1 MTR_3g085650 35.766 137 77 4 422 554 487 616 1.57e-14 77.8
MS.gene29649.t1 MTR_4g107280 26.908 249 132 12 372 581 89 326 1.97e-14 76.3
MS.gene29649.t1 MTR_7g073520 27.404 208 116 8 372 554 148 345 5.49e-14 75.1
MS.gene29649.t1 MTR_1g090917 30.070 143 77 3 447 568 8 148 6.52e-14 74.3
MS.gene29649.t1 MTR_1g090917 30.070 143 77 3 447 568 8 148 7.84e-14 73.9
MS.gene29649.t1 MTR_6g074835 50.000 62 31 0 552 613 63 124 7.85e-14 68.9
MS.gene29649.t1 MTR_4g128820 29.557 203 123 6 370 554 8 208 7.98e-14 74.7
MS.gene29649.t1 MTR_3g072320 27.363 201 126 5 367 549 7 205 8.23e-14 74.3
MS.gene29649.t1 MTR_3g054080 22.830 311 196 9 368 655 10 299 1.44e-13 73.6
MS.gene29649.t1 MTR_4g019410 28.251 223 137 9 365 567 12 231 1.55e-13 74.3
MS.gene29649.t1 MTR_4g019410 28.251 223 137 9 365 567 12 231 1.68e-13 74.3
MS.gene29649.t1 MTR_2g045470 29.665 209 124 6 367 554 15 221 2.12e-13 73.2
MS.gene29649.t1 MTR_1g080020 28.700 223 122 7 371 567 8 219 2.92e-13 70.9
MS.gene29649.t1 MTR_5g017140 29.798 198 93 5 461 655 111 265 4.07e-13 71.2
MS.gene29649.t1 MTR_2g105010 23.779 307 168 11 366 652 8 268 4.45e-13 72.4
MS.gene29649.t1 MTR_1g103760 29.808 208 124 8 367 554 7 212 6.38e-13 71.6
MS.gene29649.t1 MTR_8g093730 25.078 319 171 11 356 652 283 555 6.81e-13 72.4
MS.gene29649.t1 MTR_4g107280 29.870 154 84 6 447 581 139 287 7.82e-13 71.2
MS.gene29649.t1 MTR_6g074480 58.696 46 19 0 614 659 30 75 8.51e-13 64.3
MS.gene29649.t1 MTR_4g049730 26.549 226 119 6 435 658 75 255 9.35e-13 70.9
MS.gene29649.t1 MTR_8g024100 25.792 221 141 6 368 568 11 228 1.23e-12 71.6
MS.gene29649.t1 MTR_1g101630 25.407 307 157 11 371 652 40 299 1.25e-12 71.2
MS.gene29649.t1 MTR_3g099767 28.000 200 128 5 372 559 112 307 2.48e-12 70.1
MS.gene29649.t1 MTR_3g099920 29.851 201 121 8 372 554 19 217 3.50e-12 69.7
MS.gene29649.t1 MTR_5g023150 28.718 195 106 9 397 565 221 408 5.99e-12 68.9
MS.gene29649.t1 MTR_5g023150 28.718 195 106 9 397 565 318 505 7.34e-12 68.9
MS.gene29649.t1 MTR_5g067150 28.972 214 125 10 362 554 1 208 8.20e-12 68.2
MS.gene29649.t1 MTR_5g067150 28.972 214 125 10 362 554 1 208 8.52e-12 68.2
MS.gene29649.t1 MTR_3g095620 32.243 214 124 9 372 566 25 236 8.63e-12 67.0
MS.gene29649.t1 MTR_5g067150 28.972 214 125 10 362 554 1 208 1.20e-11 67.4
MS.gene29649.t1 MTR_2g088020 40.860 93 45 4 461 550 110 195 1.39e-11 67.4
MS.gene29649.t1 MTR_1g099110 27.136 199 114 7 390 566 282 471 1.40e-11 67.8
MS.gene29649.t1 MTR_6g012980 26.587 252 126 9 412 651 120 324 1.62e-11 67.4
MS.gene29649.t1 MTR_1g050690 33.171 205 97 11 374 549 419 612 1.82e-11 67.8
MS.gene29649.t1 MTR_3g026250 29.130 230 123 11 371 563 26 252 2.10e-11 67.4
MS.gene29649.t1 MTR_1g099110 27.136 199 114 7 390 566 299 488 2.35e-11 67.4
MS.gene29649.t1 MTR_5g088350 28.638 213 123 9 369 556 10 218 2.70e-11 66.6
MS.gene29649.t1 MTR_5g088350 28.638 213 123 9 369 556 10 218 3.05e-11 65.9
MS.gene29649.t1 MTR_3g056010 28.448 232 127 11 370 572 26 247 4.95e-11 64.7
MS.gene29649.t1 MTR_3g056025 28.448 232 127 11 370 572 26 247 5.89e-11 64.3
MS.gene29649.t1 MTR_4g074875 28.293 205 112 6 371 549 19 214 6.15e-11 66.6
MS.gene29649.t1 MTR_4g074875 28.293 205 112 6 371 549 19 214 6.90e-11 66.2
MS.gene29649.t1 MTR_5g088350 28.638 213 123 9 369 556 10 218 8.69e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29649.t1 AT2G40120 72.781 338 70 1 338 653 227 564 2.20e-179 522
MS.gene29649.t1 AT2G40120 41.989 181 59 7 3 155 1 163 5.85e-21 97.8
MS.gene29649.t1 AT1G73460 61.518 382 122 3 303 659 786 1167 9.98e-161 493
MS.gene29649.t1 AT1G73460 61.518 382 122 3 303 659 786 1167 9.98e-161 493
MS.gene29649.t1 AT1G73450 64.943 348 100 1 334 659 803 1150 1.16e-160 492
MS.gene29649.t1 AT3G17750 64.943 348 100 1 334 659 789 1136 3.93e-156 480
MS.gene29649.t1 AT5G35980 33.143 350 162 8 371 653 121 465 1.00e-42 166
MS.gene29649.t1 AT5G35980 33.143 350 162 8 371 653 86 430 1.03e-42 166
MS.gene29649.t1 AT5G35980 33.143 350 162 8 371 653 121 465 1.12e-42 165
MS.gene29649.t1 AT3G25840 32.537 335 165 9 367 653 350 671 5.58e-40 156
MS.gene29649.t1 AT3G25840 32.537 335 165 9 367 653 612 933 7.77e-40 157
MS.gene29649.t1 AT4G03175 65.591 93 32 0 561 653 1 93 5.54e-39 139
MS.gene29649.t1 AT4G24740 29.129 333 183 7 371 654 59 387 1.79e-37 144
MS.gene29649.t1 AT4G24740 29.217 332 182 7 371 653 97 424 3.02e-37 144
MS.gene29649.t1 AT1G13350 29.909 331 186 9 364 653 434 759 2.60e-36 146
MS.gene29649.t1 AT1G13350 29.909 331 186 9 364 653 461 786 3.22e-36 145
MS.gene29649.t1 AT4G24740 29.231 325 177 7 378 653 1 321 4.45e-36 139
MS.gene29649.t1 AT4G24740 29.231 325 177 7 378 653 1 321 4.45e-36 139
MS.gene29649.t1 AT4G24740 29.231 325 177 7 378 653 1 321 4.45e-36 139
MS.gene29649.t1 AT1G13350 29.909 331 186 9 364 653 507 832 5.24e-36 145
MS.gene29649.t1 AT3G53570 28.863 343 188 7 363 653 92 430 6.22e-36 141
MS.gene29649.t1 AT3G53570 28.863 343 188 7 363 653 92 430 6.22e-36 141
MS.gene29649.t1 AT3G53570 28.863 343 188 7 363 653 106 444 6.43e-36 141
MS.gene29649.t1 AT3G53570 28.863 343 188 7 363 653 106 444 6.43e-36 141
MS.gene29649.t1 AT3G53570 28.863 343 188 7 363 653 106 444 6.43e-36 141
MS.gene29649.t1 AT4G32660 30.178 338 183 5 364 652 63 396 7.28e-35 137
MS.gene29649.t1 AT4G32660 30.178 338 183 5 364 652 55 388 7.64e-35 137
MS.gene29649.t1 AT3G53640 29.394 330 189 7 364 653 315 640 1.17e-34 140
MS.gene29649.t1 AT4G24740 31.102 254 127 4 371 580 97 346 2.80e-31 125
MS.gene29649.t1 AT4G32660 31.973 294 150 6 396 652 4 284 4.51e-31 123
MS.gene29649.t1 AT4G24740 31.174 247 122 4 378 580 1 243 4.56e-30 119
MS.gene29649.t1 AT4G32660 32.210 267 133 4 368 590 67 329 5.76e-30 122
MS.gene29649.t1 AT5G19010 30.000 320 153 11 369 647 22 311 1.41e-29 124
MS.gene29649.t1 AT4G24740 33.175 211 113 5 471 653 8 218 6.76e-29 115
MS.gene29649.t1 AT4G24740 33.175 211 113 5 471 653 8 218 6.76e-29 115
MS.gene29649.t1 AT3G14720 29.091 330 163 12 369 657 22 321 1.55e-26 115
MS.gene29649.t1 AT5G14640 29.412 306 170 10 372 652 74 358 3.40e-26 112
MS.gene29649.t1 AT5G14640 29.412 306 170 10 372 652 74 358 3.40e-26 112
MS.gene29649.t1 AT2G42880 29.730 333 157 12 369 657 22 321 4.16e-26 112
MS.gene29649.t1 AT3G14720 29.091 330 163 12 369 657 22 321 4.47e-26 112
MS.gene29649.t1 AT3G14720 29.091 330 163 12 369 657 22 321 4.47e-26 112
MS.gene29649.t1 AT4G18710 29.022 317 157 10 372 652 40 324 4.61e-26 111
MS.gene29649.t1 AT2G42880 29.730 333 157 12 369 657 22 321 6.44e-26 113
MS.gene29649.t1 AT3G59790 28.975 283 169 6 381 653 86 346 6.81e-26 110
MS.gene29649.t1 AT3G18040 28.923 325 160 11 369 652 15 309 8.89e-26 112
MS.gene29649.t1 AT3G18040 28.923 325 160 11 369 652 20 314 9.42e-26 112
MS.gene29649.t1 AT3G18040 28.923 325 160 11 369 652 129 423 9.63e-26 112
MS.gene29649.t1 AT1G53510 27.576 330 168 10 369 657 22 321 1.69e-25 112
MS.gene29649.t1 AT3G18040 28.923 325 160 11 369 652 129 423 1.87e-25 112
MS.gene29649.t1 AT4G00720 26.515 396 193 15 312 652 70 422 3.24e-25 110
MS.gene29649.t1 AT2G01450 26.935 323 169 11 369 652 13 307 4.52e-25 109
MS.gene29649.t1 AT2G01450 26.935 323 169 11 369 652 13 307 4.52e-25 109
MS.gene29649.t1 AT2G01450 26.935 323 169 11 369 652 13 307 4.52e-25 109
MS.gene29649.t1 AT2G01450 26.935 323 169 11 369 652 13 307 4.52e-25 109
MS.gene29649.t1 AT3G61160 29.221 308 168 11 372 652 109 393 4.66e-25 108
MS.gene29649.t1 AT3G61160 29.221 308 168 11 372 652 102 386 5.00e-25 108
MS.gene29649.t1 AT3G61160 29.221 308 168 11 372 652 102 386 6.04e-25 108
MS.gene29649.t1 AT5G26751 27.726 321 156 10 372 652 69 353 7.07e-25 108
MS.gene29649.t1 AT2G43790 28.431 306 170 8 378 656 69 352 8.93e-25 107
MS.gene29649.t1 AT4G24740 29.596 223 109 4 371 549 97 315 9.70e-25 105
MS.gene29649.t1 AT1G73670 27.926 376 192 15 323 653 41 382 1.03e-24 109
MS.gene29649.t1 AT3G45640 28.339 307 170 9 378 656 44 328 1.58e-24 106
MS.gene29649.t1 AT4G01370 28.339 307 170 10 378 656 49 333 1.73e-24 106
MS.gene29649.t1 AT3G05840 27.414 321 157 10 372 652 73 357 2.27e-24 106
MS.gene29649.t1 AT3G05840 27.414 321 157 10 372 652 73 357 2.27e-24 106
MS.gene29649.t1 AT1G18150 28.399 331 166 11 369 658 101 401 8.39e-24 106
MS.gene29649.t1 AT1G18150 28.399 331 166 11 369 658 101 401 8.39e-24 106
MS.gene29649.t1 AT1G18150 28.399 331 166 11 369 658 101 401 8.39e-24 106
MS.gene29649.t1 AT4G11330 28.571 308 168 11 378 656 49 333 9.33e-24 104
MS.gene29649.t1 AT1G07880 27.653 311 173 10 376 657 37 324 1.03e-23 103
MS.gene29649.t1 AT1G06390 27.673 318 162 10 372 653 70 355 1.37e-23 104
MS.gene29649.t1 AT1G06390 27.673 318 162 10 372 653 70 355 1.37e-23 104
MS.gene29649.t1 AT2G30980 27.812 320 163 10 372 655 72 359 1.84e-23 103
MS.gene29649.t1 AT2G46070 28.477 302 170 8 378 653 81 362 2.08e-23 103
MS.gene29649.t1 AT2G46070 28.713 303 168 8 378 653 47 328 2.32e-23 102
MS.gene29649.t1 AT1G01560 28.247 308 171 10 378 657 46 331 3.82e-23 102
MS.gene29649.t1 AT3G61160 28.727 275 149 9 372 606 102 369 4.01e-23 102
MS.gene29649.t1 AT3G61160 29.845 258 134 9 372 589 102 352 4.20e-23 101
MS.gene29649.t1 AT3G61160 29.845 258 134 9 372 589 109 359 5.29e-23 101
MS.gene29649.t1 AT4G18710 31.982 222 126 7 372 571 34 252 5.75e-23 99.8
MS.gene29649.t1 AT1G57870 30.738 244 127 9 363 571 64 300 2.39e-22 100
MS.gene29649.t1 AT1G57870 30.738 244 127 9 363 571 64 300 2.39e-22 100
MS.gene29649.t1 AT1G57870 30.738 244 127 9 363 571 64 300 2.39e-22 100
MS.gene29649.t1 AT4G19110 28.013 307 178 9 371 656 3 287 3.11e-22 100
MS.gene29649.t1 AT4G19110 28.013 307 178 9 371 656 3 287 3.46e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G09840 30.328 244 128 9 363 571 65 301 3.57e-22 100
MS.gene29649.t1 AT1G57870 30.738 244 127 9 363 571 64 300 5.05e-22 100
MS.gene29649.t1 AT3G18040 30.165 242 128 8 425 652 12 226 6.78e-22 99.4
MS.gene29649.t1 AT4G13020 27.961 304 176 8 371 653 3 284 7.59e-22 98.6
MS.gene29649.t1 AT4G13020 28.289 304 175 8 371 653 3 284 7.63e-22 99.0
MS.gene29649.t1 AT4G13020 27.961 304 176 8 371 653 3 284 8.23e-22 98.6
MS.gene29649.t1 AT4G13020 28.289 304 175 8 371 653 3 284 9.21e-22 99.0
MS.gene29649.t1 AT4G13020 27.961 304 176 8 371 653 11 292 1.88e-21 98.2
MS.gene29649.t1 AT4G13020 27.961 304 176 8 371 653 11 292 1.90e-21 98.2
MS.gene29649.t1 AT1G59580 25.857 321 175 11 371 656 31 323 5.63e-21 95.9
MS.gene29649.t1 AT1G59580 25.857 321 175 11 371 656 31 323 5.63e-21 95.9
MS.gene29649.t1 AT2G46070 31.982 222 120 5 378 574 47 262 5.70e-21 95.1
MS.gene29649.t1 AT2G38620 26.543 324 185 8 371 658 3 309 6.46e-21 94.4
MS.gene29649.t1 AT5G45430 28.115 313 170 11 371 656 3 287 6.70e-21 97.1
MS.gene29649.t1 AT5G45430 28.115 313 170 11 371 656 3 287 8.94e-21 96.7
MS.gene29649.t1 AT4G13020 27.476 313 175 8 371 653 3 293 1.86e-20 95.1
MS.gene29649.t1 AT4G13020 27.157 313 176 8 371 653 3 293 2.20e-20 94.4
MS.gene29649.t1 AT2G18170 26.019 319 177 10 371 656 31 323 2.23e-20 94.0
MS.gene29649.t1 AT1G01560 34.146 205 100 8 378 555 46 242 2.25e-20 92.0
MS.gene29649.t1 AT1G01560 34.146 205 100 8 378 555 46 242 2.25e-20 92.0
MS.gene29649.t1 AT1G01560 33.036 224 115 8 378 574 46 261 2.49e-20 93.6
MS.gene29649.t1 AT4G36450 28.632 234 135 7 425 652 109 316 3.44e-20 93.2
MS.gene29649.t1 AT4G35500 31.765 170 94 5 497 653 257 417 3.62e-20 94.4
MS.gene29649.t1 AT1G54610 28.231 294 169 8 378 648 124 398 4.46e-20 94.7
MS.gene29649.t1 AT1G54610 28.231 294 169 8 378 648 124 398 4.46e-20 94.7
MS.gene29649.t1 AT1G54610 28.231 294 169 8 378 648 124 398 4.46e-20 94.7
MS.gene29649.t1 AT4G35500 31.765 170 94 5 497 653 258 418 5.74e-20 93.6
MS.gene29649.t1 AT1G76540 25.246 305 180 8 376 651 18 303 7.18e-20 91.7
MS.gene29649.t1 AT5G22840 30.682 176 108 6 492 659 308 477 8.69e-20 94.0
MS.gene29649.t1 AT1G03740 27.371 369 189 15 331 647 151 492 8.84e-20 94.4
MS.gene29649.t1 AT1G10210 26.183 317 179 10 371 656 31 323 1.01e-19 92.0
MS.gene29649.t1 AT1G10210 26.183 317 179 10 371 656 31 323 1.01e-19 92.0
MS.gene29649.t1 AT1G10210 26.183 317 179 10 371 656 31 323 1.01e-19 92.0
MS.gene29649.t1 AT2G17530 31.176 170 95 5 497 653 256 416 1.04e-19 92.8
MS.gene29649.t1 AT2G17530 31.176 170 95 5 497 653 256 416 1.04e-19 92.8
MS.gene29649.t1 AT1G03740 27.371 369 189 15 331 647 151 492 1.05e-19 94.4
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 286 596 1.10e-19 94.0
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 286 596 1.10e-19 94.0
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 286 596 1.10e-19 94.0
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 286 596 1.10e-19 94.0
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 286 596 1.10e-19 94.0
MS.gene29649.t1 AT1G73690 28.758 306 178 12 368 653 7 292 1.29e-19 92.0
MS.gene29649.t1 AT1G20930 24.590 305 182 7 376 651 20 305 1.32e-19 90.9
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 152 462 1.70e-19 92.4
MS.gene29649.t1 AT5G63370 26.586 331 182 13 366 655 152 462 1.70e-19 92.4
MS.gene29649.t1 AT4G19110 29.362 235 141 6 425 656 19 231 4.01e-19 90.5
MS.gene29649.t1 AT2G38620 31.500 200 116 6 463 658 65 247 5.51e-19 87.4
MS.gene29649.t1 AT1G09840 41.176 119 65 4 457 571 57 174 5.75e-19 88.6
MS.gene29649.t1 AT1G07880 31.250 208 108 6 376 556 37 236 6.00e-19 87.4
MS.gene29649.t1 AT3G54180 26.087 322 187 9 371 658 3 307 1.19e-18 87.8
MS.gene29649.t1 AT3G48750 27.213 305 173 11 371 649 3 284 1.22e-18 87.4
MS.gene29649.t1 AT2G38490 30.667 225 127 8 366 567 22 240 1.68e-18 89.0
MS.gene29649.t1 AT1G53050 29.236 301 167 11 378 653 140 419 3.12e-18 89.4
MS.gene29649.t1 AT1G53050 29.236 301 167 11 378 653 140 419 3.12e-18 89.4
MS.gene29649.t1 AT3G44850 30.769 169 105 5 493 653 318 482 3.13e-18 89.0
MS.gene29649.t1 AT3G05050 29.787 235 136 9 378 587 144 374 3.29e-18 89.0
MS.gene29649.t1 AT3G05050 29.787 235 136 9 378 587 144 374 3.29e-18 89.0
MS.gene29649.t1 AT3G05050 29.787 235 136 9 378 587 144 374 3.29e-18 89.0
MS.gene29649.t1 AT5G04510 28.829 222 120 7 379 568 51 266 1.35e-17 85.9
MS.gene29649.t1 AT3G53030 30.682 176 106 6 493 659 305 473 2.05e-17 86.3
MS.gene29649.t1 AT2G38620 29.018 224 122 5 371 558 3 225 2.62e-17 82.8
MS.gene29649.t1 AT2G38620 29.018 224 122 5 371 558 3 225 2.62e-17 82.8
MS.gene29649.t1 AT5G04510 28.829 222 120 7 379 568 51 266 3.80e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 4.54e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 4.54e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 4.54e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 4.54e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 4.54e-17 85.5
MS.gene29649.t1 AT5G44290 26.780 295 174 9 376 647 141 416 5.87e-17 85.1
MS.gene29649.t1 AT5G04510 28.829 222 120 7 379 568 51 266 6.67e-17 82.4
MS.gene29649.t1 AT5G63370 29.339 242 127 9 366 571 286 519 7.10e-17 84.7
MS.gene29649.t1 AT5G63370 29.339 242 127 9 366 571 286 519 7.10e-17 84.7
MS.gene29649.t1 AT5G44290 26.490 302 180 9 369 647 134 416 7.17e-17 84.7
MS.gene29649.t1 AT1G66750 28.146 302 179 14 371 653 12 294 8.71e-17 82.8
MS.gene29649.t1 AT5G63370 29.339 242 127 9 366 571 152 385 1.43e-16 82.8
MS.gene29649.t1 AT1G50240 32.243 214 123 9 372 567 6 215 1.69e-16 84.3
MS.gene29649.t1 AT1G50240 32.243 214 123 9 372 567 6 215 1.69e-16 84.3
MS.gene29649.t1 AT4G22940 26.102 295 179 7 376 648 107 384 2.08e-16 83.2
MS.gene29649.t1 AT2G30360 27.419 310 157 12 365 652 14 277 2.33e-16 82.4
MS.gene29649.t1 AT1G74330 25.503 298 176 9 376 647 125 402 2.55e-16 83.2
MS.gene29649.t1 AT1G74330 25.503 298 176 9 376 647 125 402 2.61e-16 83.2
MS.gene29649.t1 AT3G10540 29.091 220 122 6 379 568 52 267 2.78e-16 82.4
MS.gene29649.t1 AT1G74330 25.503 298 176 9 376 647 125 402 2.81e-16 83.2
MS.gene29649.t1 AT4G22940 26.102 295 179 7 376 648 107 384 3.36e-16 82.0
MS.gene29649.t1 AT1G18040 25.574 305 189 11 368 653 8 293 4.35e-16 81.3
MS.gene29649.t1 AT2G34180 24.522 314 169 10 365 657 50 316 5.11e-16 81.6
MS.gene29649.t1 AT3G15220 24.841 314 170 9 364 658 7 273 8.44e-16 81.6
MS.gene29649.t1 AT1G08650 27.835 194 97 5 461 652 121 273 1.04e-15 78.6
MS.gene29649.t1 AT1G53165 24.841 314 170 9 364 658 7 273 1.07e-15 81.3
MS.gene29649.t1 AT1G53165 24.841 314 170 9 364 658 7 273 1.26e-15 81.3
MS.gene29649.t1 AT1G53165 24.841 314 170 9 364 658 7 273 1.44e-15 80.9
MS.gene29649.t1 AT1G12580 25.000 324 169 11 363 658 31 308 2.03e-15 80.1
MS.gene29649.t1 AT4G30960 29.167 216 131 7 365 560 17 230 2.24e-15 79.3
MS.gene29649.t1 AT5G55090 31.122 196 84 7 461 652 108 256 2.73e-15 79.3
MS.gene29649.t1 AT5G45820 28.505 214 131 7 367 560 7 218 5.31e-15 78.2
MS.gene29649.t1 AT5G55090 32.161 199 78 9 461 652 170 318 9.10e-15 77.8
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.14e-14 77.8
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.18e-14 77.8
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.18e-14 77.8
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.25e-14 77.8
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.35e-14 77.4
MS.gene29649.t1 AT5G39440 26.899 316 158 13 357 653 10 271 1.57e-14 77.0
MS.gene29649.t1 AT1G53570 27.541 305 151 13 376 657 218 475 1.62e-14 77.0
MS.gene29649.t1 AT4G26890 37.838 111 65 2 461 571 107 213 1.68e-14 76.6
MS.gene29649.t1 AT2G25090 24.675 231 143 5 365 566 8 236 2.55e-14 76.3
MS.gene29649.t1 AT2G37840 27.650 217 140 7 368 567 8 224 7.45e-14 75.5
MS.gene29649.t1 AT5G57630 29.798 198 120 6 370 550 10 205 1.09e-13 73.9
MS.gene29649.t1 AT5G57630 29.798 198 120 6 370 550 10 205 1.56e-13 73.6
MS.gene29649.t1 AT2G26980 28.636 220 133 7 369 567 11 227 2.21e-13 72.8
MS.gene29649.t1 AT1G08650 38.043 92 54 2 461 550 121 211 3.25e-13 70.9
MS.gene29649.t1 AT2G26980 28.636 220 133 7 369 567 11 227 3.47e-13 72.8
MS.gene29649.t1 AT2G26980 28.636 220 133 7 369 567 21 237 4.46e-13 72.4
MS.gene29649.t1 AT5G01820 31.193 218 127 11 370 567 20 234 7.51e-13 71.6
MS.gene29649.t1 AT3G53930 29.358 218 131 9 370 567 18 232 7.71e-13 72.4
MS.gene29649.t1 AT2G26980 29.091 220 132 8 369 567 11 227 8.52e-13 69.7
MS.gene29649.t1 AT3G53930 29.358 218 131 9 370 567 18 232 8.94e-13 72.0
MS.gene29649.t1 AT2G26980 28.636 220 133 7 369 567 11 227 9.37e-13 71.2
MS.gene29649.t1 AT3G04530 37.895 95 57 2 461 554 118 211 2.33e-12 68.6
MS.gene29649.t1 AT4G04710 36.691 139 83 4 425 560 96 232 2.43e-12 70.1
MS.gene29649.t1 AT4G04710 36.691 139 83 4 425 560 110 246 2.53e-12 70.1
MS.gene29649.t1 AT1G69220 23.762 303 163 9 371 652 248 503 3.34e-12 70.5
MS.gene29649.t1 AT3G08730 26.341 205 122 7 372 554 134 331 4.19e-12 69.3
MS.gene29649.t1 AT3G08730 26.341 205 122 7 372 554 134 331 4.19e-12 69.3
MS.gene29649.t1 AT1G12680 33.929 112 73 1 452 563 196 306 4.72e-12 69.3
MS.gene29649.t1 AT4G04710 28.571 231 127 8 425 652 110 305 5.59e-12 68.9
MS.gene29649.t1 AT2G42550 37.624 101 52 3 461 552 119 217 5.69e-12 68.2
MS.gene29649.t1 AT3G06030 28.019 207 120 8 371 551 67 270 6.51e-12 69.3
MS.gene29649.t1 AT4G04710 28.571 231 127 8 425 652 110 305 6.56e-12 68.9
MS.gene29649.t1 AT4G38470 30.769 156 94 6 421 569 356 504 8.89e-12 68.6
MS.gene29649.t1 AT2G32510 37.755 98 54 3 456 550 102 195 1.38e-11 67.0
MS.gene29649.t1 AT1G14000 29.469 207 112 9 378 556 168 368 1.77e-11 67.4
MS.gene29649.t1 AT1G48260 27.753 227 140 7 362 567 1 224 2.28e-11 67.0
MS.gene29649.t1 AT2G34290 36.275 102 58 2 457 551 107 208 2.81e-11 65.1
MS.gene29649.t1 AT5G35410 26.829 205 129 6 369 554 8 210 2.83e-11 66.2
MS.gene29649.t1 AT3G23000 27.477 222 137 9 367 567 20 238 3.02e-11 66.6
MS.gene29649.t1 AT3G61960 29.126 206 125 8 368 554 6 209 3.72e-11 66.6
MS.gene29649.t1 AT3G61960 29.126 206 125 8 368 554 6 209 3.81e-11 66.6
MS.gene29649.t1 AT2G05060 35.000 100 58 2 457 551 122 219 3.90e-11 65.1
MS.gene29649.t1 AT2G41930 37.383 107 49 5 461 551 115 219 6.14e-11 65.1
MS.gene29649.t1 AT1G18350 29.333 225 122 10 357 555 30 243 6.46e-11 64.3
MS.gene29649.t1 AT5G35410 26.829 205 129 6 369 554 8 210 7.82e-11 65.1

Find 115 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAATTTCCTTCAAATTA+AGG 0.240015 5.1:+64808715 None:intergenic
GAAGTAAATGTCATATTCTT+TGG 0.262801 5.1:+64807070 None:intergenic
ATGCTTCACCACCAGATTCT+TGG 0.279095 5.1:+64807774 None:intergenic
TGCTCCAATGATGTCTCTTC+TGG 0.286338 5.1:+64806660 None:intergenic
AATCGCGTGCCGTGCCGAAT+TGG 0.291398 5.1:+64809141 None:intergenic
CAGAAATTCAACCAAGAATC+TGG 0.301956 5.1:-64807785 MS.gene29649:CDS
ATCTGTTTCAACAACTTTGA+TGG 0.312286 5.1:+64808587 None:intergenic
TCTTGCAGTAGGCCTTCTTT+TGG 0.316790 5.1:+64806575 None:intergenic
TTTGATGGACCGGATTTCTT+TGG 0.344543 5.1:-64809041 MS.gene29649:CDS
AACTTTGATGGTTAAGTCAT+AGG 0.346766 5.1:+64808599 None:intergenic
GCTCATTACTCGACAATGTT+TGG 0.352792 5.1:-64807599 MS.gene29649:CDS
TGCAAAAGCAGTCCAGGTTC+AGG 0.360410 5.1:-64808774 MS.gene29649:CDS
CTTTGAAGAAATTCAGTTAG+AGG 0.368953 5.1:-64808940 MS.gene29649:CDS
TGCCTTTGTAATCATTCATC+TGG 0.378440 5.1:-64808882 MS.gene29649:CDS
GAAATAAAGATTATTGATCT+TGG 0.381733 5.1:-64807490 MS.gene29649:CDS
ATGGTCACTCGGCTGTATTT+TGG 0.383339 5.1:-64807362 MS.gene29649:CDS
ATCATCACAACAGCATCATT+TGG 0.386422 5.1:+64807173 None:intergenic
CTTTAGCTACCTTAATTTGA+AGG 0.398512 5.1:-64808724 MS.gene29649:CDS
GCAATCTGAACTATGCTTCA+TGG 0.399375 5.1:+64808632 None:intergenic
GCACGCATGATTGGAATGTT+TGG 0.399540 5.1:-64807146 MS.gene29649:CDS
ATGCGCAACAGTGTCTTTCT+CGG 0.403960 5.1:+64808815 None:intergenic
CGATTCCCATCTGAAGATCA+TGG 0.404276 5.1:+64808002 None:intergenic
ATGATTCTTGCACGCATGAT+TGG 0.406286 5.1:-64807155 MS.gene29649:CDS
ATTGCAATATTTGCATAACT+TGG 0.407812 5.1:-64807572 MS.gene29649:CDS
TAAGAAGCTTGATTTCATCT+AGG 0.411237 5.1:+64807930 None:intergenic
GATGAGGAATTAATTCCATA+TGG 0.411809 5.1:+64809209 None:intergenic
CCATAGCTTTCGATCCCATT+TGG 0.420647 5.1:+64808561 None:intergenic
GAGTGAAGAACTCCATGTTC+CGG 0.421411 5.1:-64808517 MS.gene29649:CDS
GCAGAATTTATCAATCCATA+TGG 0.423297 5.1:-64809224 MS.gene29649:intron
TGAAGGCCTAACATCACTTC+AGG 0.423350 5.1:+64807406 None:intergenic
ATCGCGTGCCGTGCCGAATT+GGG 0.427121 5.1:+64809142 None:intergenic
ATGATGAAAAGATTGATATA+TGG 0.430762 5.1:-64807381 MS.gene29649:CDS
ATGACCGAGTTGAGCACAAT+TGG 0.432574 5.1:+64808088 None:intergenic
CGGAGTTTGACCGGAGGAGG+TGG 0.439905 5.1:+64809927 None:intergenic
TCTGATAGATTGTCCCAATT+CGG 0.444063 5.1:-64809155 MS.gene29649:CDS
GTTGAAACAGATCTACCAAA+TGG 0.447645 5.1:-64808576 MS.gene29649:CDS
TCTCCATCTGCGGCAACCTC+CGG 0.466417 5.1:+64808498 None:intergenic
TCGGTTCAGCTGCATTCAGT+AGG 0.474081 5.1:-64808036 MS.gene29649:CDS
GTTCCGGAGGTTGCCGCAGA+TGG 0.474471 5.1:-64808501 MS.gene29649:CDS
AAATCCGGTCCATCAAAATC+AGG 0.474499 5.1:+64809047 None:intergenic
CGGCCGTCGGAGTTGACTTC+CGG 0.476999 5.1:-64809894 MS.gene29649:CDS
GTGCTCAACTCGGTCATGGC+TGG 0.478108 5.1:-64808082 MS.gene29649:CDS
CTGCGGCAACCTCCGGAACA+TGG 0.482243 5.1:+64808505 None:intergenic
CTACAAGAACCTCCTGAACC+TGG 0.483158 5.1:+64808762 None:intergenic
TTGCAATATTTGCATAACTT+GGG 0.484305 5.1:-64807571 MS.gene29649:CDS
TAAGTTTGCACGCAGAAGTT+CGG 0.485105 5.1:+64807817 None:intergenic
AAGAAGGCCTACTGCAAGAC+AGG 0.488234 5.1:-64806571 MS.gene29649:CDS
ACTTTGATGGTTAAGTCATA+GGG 0.488870 5.1:+64808600 None:intergenic
GATGGTTCCTCCACCTCCTC+CGG 0.491108 5.1:-64809937 MS.gene29649:CDS
ATTCAAAAGATTATTGTCAC+GGG 0.491321 5.1:-64808839 MS.gene29649:CDS
CTTTGACATCCAAAGAAATC+CGG 0.493265 5.1:+64809032 None:intergenic
ACCAACATCTCCATATCAAA+AGG 0.493340 5.1:+64807122 None:intergenic
TTTGGAGAATTGACCGTCGC+CGG 0.495527 5.1:+64809875 None:intergenic
ATTCAGTTAGAGGAAGATGA+AGG 0.497484 5.1:-64808930 MS.gene29649:CDS
ATATGCAACATGAACCGTAT+TGG 0.500380 5.1:-64809106 MS.gene29649:CDS
GTAAATGAGCGGAGTTTGAC+CGG 0.504559 5.1:+64809918 None:intergenic
TTTAGTGCCTGTCTTGCAGT+AGG 0.505137 5.1:+64806564 None:intergenic
AATTCCAGAAGAGACATCAT+TGG 0.515774 5.1:-64806664 MS.gene29649:CDS
GAGCGGAGTTTGACCGGAGG+AGG 0.517713 5.1:+64809924 None:intergenic
AATTGTGCTCAACTCGGTCA+TGG 0.519059 5.1:-64808086 MS.gene29649:CDS
ATCATTGGAGCACCACCTAC+AGG 0.520076 5.1:-64806649 MS.gene29649:CDS
GGAGATGTTGGTGAAAGGGC+AGG 0.522737 5.1:-64807111 MS.gene29649:CDS
AGTTTGACCGGAGGAGGTGG+AGG 0.526122 5.1:+64809930 None:intergenic
CGGTTCAGCTGCATTCAGTA+GGG 0.531413 5.1:-64808035 MS.gene29649:CDS
TATTCAAAAGATTATTGTCA+CGG 0.532174 5.1:-64808840 MS.gene29649:CDS
TTGAAACAGATCTACCAAAT+GGG 0.536829 5.1:-64808575 MS.gene29649:CDS
AGAGCTCCTGAAGTGATGTT+AGG 0.539217 5.1:-64807412 MS.gene29649:CDS
TGTGTCTATATGTACAATCT+CGG 0.544813 5.1:-64807441 MS.gene29649:CDS
ATATGGAGATGTTGGTGAAA+GGG 0.549392 5.1:-64807115 MS.gene29649:CDS
CTTCACACGAGAATGTTACA+TGG 0.556068 5.1:+64806512 None:intergenic
GTTACATGGACTTGTATACA+TGG 0.557027 5.1:+64806526 None:intergenic
TCAAGCCCATGATCTTCAGA+TGG 0.559687 5.1:-64808008 MS.gene29649:CDS
AAAGAATTTCTCGTAGTCAA+AGG 0.560157 5.1:+64809965 None:intergenic
TTAACGTCAACCCCAAAAGA+AGG 0.560479 5.1:-64806587 MS.gene29649:CDS
CATTACTCGACAATGTTTGG+AGG 0.562078 5.1:-64807596 MS.gene29649:CDS
GAATTGTACATAGAAAGAAC+AGG 0.562317 5.1:-64808407 MS.gene29649:intron
CTTTGTAATCATTCATCTGG+AGG 0.567267 5.1:-64808879 MS.gene29649:CDS
CCAAATGGGATCGAAAGCTA+TGG 0.568109 5.1:-64808561 MS.gene29649:CDS
GGAGTTCTTCACTCAAATCT+CGG 0.573138 5.1:+64808526 None:intergenic
TCGGAGTTGACTTCCGGCGA+CGG 0.574134 5.1:-64809888 MS.gene29649:intron
ACATAGTATCAGTGACCTGT+AGG 0.577899 5.1:+64806634 None:intergenic
TTAAGGTAGCTAAAGTTCAA+AGG 0.581803 5.1:+64808732 None:intergenic
AGGTTACATAGACAAGTCAA+TGG 0.583395 5.1:-64808910 MS.gene29649:CDS
TCAAACTCCGCTCATTTACA+CGG 0.591605 5.1:-64809914 MS.gene29649:CDS
CTATGCTTCATGGTAAGCAC+AGG 0.592149 5.1:+64808642 None:intergenic
TTCAGGAGGTTCTTGTAGCG+AGG 0.596058 5.1:-64808757 MS.gene29649:CDS
CAGATTAGAACGTACTTCAC+CGG 0.596158 5.1:+64807327 None:intergenic
GGAGGAGGTGGAGGAACCAT+CGG 0.598776 5.1:+64809939 None:intergenic
GATTCCCATCTGAAGATCAT+GGG 0.599777 5.1:+64808003 None:intergenic
GATATGGAGATGTTGGTGAA+AGG 0.602767 5.1:-64807116 MS.gene29649:CDS
CAAGCCCATGATCTTCAGAT+GGG 0.602925 5.1:-64808007 MS.gene29649:CDS
GGAGGTTGCCGCAGATGGAG+AGG 0.605854 5.1:-64808496 MS.gene29649:CDS
TTGTATACATGGGAAAGCCA+TGG 0.610680 5.1:+64806537 None:intergenic
AGTTCCAATTGTGCTCAACT+CGG 0.611146 5.1:-64808092 MS.gene29649:CDS
AAGATTGATATATGGTCACT+CGG 0.613482 5.1:-64807373 MS.gene29649:CDS
GCATAGTTCAGATTGCTACA+AGG 0.615746 5.1:-64808625 MS.gene29649:CDS
TACTATGTGACAGAATATCT+CGG 0.618368 5.1:-64808055 MS.gene29649:CDS
TCAACTCGGTCATGGCTGGA+AGG 0.619414 5.1:-64808078 MS.gene29649:CDS
GACTGGATTTGAAGAAAACA+AGG 0.619878 5.1:-64808116 MS.gene29649:CDS
GACAGGCACTAAAACATCCA+TGG 0.620201 5.1:-64806554 MS.gene29649:CDS
ATCATTCTGAGTCTGAGATG+AGG 0.620260 5.1:+64809193 None:intergenic
AAAAGCAGTCCAGGTTCAGG+AGG 0.632418 5.1:-64808771 MS.gene29649:CDS
ATTATTATCCTCTCCATCTG+CGG 0.640914 5.1:+64808488 None:intergenic
TCGCCGGAAGTCAACTCCGA+CGG 0.644520 5.1:+64809891 None:intergenic
CTCCAGATGAATGATTACAA+AGG 0.655100 5.1:+64808880 None:intergenic
TGAAGAACTCCATGTTCCGG+AGG 0.660663 5.1:-64808514 MS.gene29649:CDS
CCGCTCATTTACACGGCCGT+CGG 0.662462 5.1:-64809907 MS.gene29649:CDS
TTACATGGACTTGTATACAT+GGG 0.672153 5.1:+64806527 None:intergenic
TAGATTGTCCCAATTCGGCA+CGG 0.675021 5.1:-64809150 MS.gene29649:CDS
TAGTATCAGTGACCTGTAGG+TGG 0.677524 5.1:+64806637 None:intergenic
AAATTCAACCAAGAATCTGG+TGG 0.683493 5.1:-64807782 MS.gene29649:CDS
TTCAAAAGATTATTGTCACG+GGG 0.686199 5.1:-64808838 MS.gene29649:CDS
CCGACGGCCGTGTAAATGAG+CGG 0.707377 5.1:+64809907 None:intergenic
TGACATTTACTTCATAAACG+AGG 0.724286 5.1:-64807060 MS.gene29649:intron
AATGAGCGGAGTTTGACCGG+AGG 0.740584 5.1:+64809921 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAAAATACTCT+TGG + chr5.1:64807288-64807307 None:intergenic 10.0%
!!! TAATATATACTTTTCTTTTT+TGG + chr5.1:64809792-64809811 None:intergenic 10.0%
!! AATTTGTAATGCATAAAAAT+AGG - chr5.1:64807330-64807349 MS.gene29649:intron 15.0%
!! CAACAAAAATAAATAAATCT+AGG + chr5.1:64807367-64807386 None:intergenic 15.0%
!!! ATTTGAATGGATTTTTTTTT+TGG - chr5.1:64808937-64808956 MS.gene29649:CDS 15.0%
!!! TAATGAAATACATTTTTCTA+TGG - chr5.1:64809321-64809340 MS.gene29649:intron 15.0%
!!! TTTGAATGGATTTTTTTTTT+GGG - chr5.1:64808938-64808957 MS.gene29649:CDS 15.0%
!! AAAAATGTAATTTGAATGGA+TGG + chr5.1:64809873-64809892 None:intergenic 20.0%
!! AGCTTAATATAATCCAAATT+TGG + chr5.1:64807256-64807275 None:intergenic 20.0%
!! ATGATGAAAAGATTGATATA+TGG - chr5.1:64809229-64809248 MS.gene29649:intron 20.0%
!! CAAACGAAATATGTTAAAAA+AGG + chr5.1:64809596-64809615 None:intergenic 20.0%
!! CAAATACACAAATTCAAATT+TGG + chr5.1:64807118-64807137 None:intergenic 20.0%
!! GAAATAAAGATTATTGATCT+TGG - chr5.1:64809120-64809139 MS.gene29649:CDS 20.0%
!! GAAGATTATTAAAAATGACA+AGG - chr5.1:64808641-64808660 MS.gene29649:CDS 20.0%
!! TATTCAAAAGATTATTGTCA+CGG - chr5.1:64807770-64807789 MS.gene29649:CDS 20.0%
!! TGAATTTATGTTTCCAAATT+TGG - chr5.1:64807240-64807259 MS.gene29649:intron 20.0%
!!! AGAAAAGTATATATTAGTGT+TGG - chr5.1:64809796-64809815 MS.gene29649:intron 20.0%
!!! TACATTATTAAAGATTGGTT+GGG + chr5.1:64809898-64809917 None:intergenic 20.0%
!!! TGATTTTTCTGATAAATCTA+AGG + chr5.1:64809848-64809867 None:intergenic 20.0%
!!! TTCGAATTTCTAAGAAAAAA+TGG - chr5.1:64806557-64806576 MS.gene29649:CDS 20.0%
! ATAATGTTAGGTCAAAATCA+TGG + chr5.1:64808413-64808432 None:intergenic 25.0%
! ATTCAAAAGATTATTGTCAC+GGG - chr5.1:64807771-64807790 MS.gene29649:CDS 25.0%
! ATTGCAATATTTGCATAACT+TGG - chr5.1:64809038-64809057 MS.gene29649:CDS 25.0%
! CAATCTTTAATAATGTACAC+AGG - chr5.1:64809901-64809920 MS.gene29649:CDS 25.0%
! CTGTGTACATTATTAAAGAT+TGG + chr5.1:64809903-64809922 None:intergenic 25.0%
! GAAGTAAATGTCATATTCTT+TGG + chr5.1:64809543-64809562 None:intergenic 25.0%
! GAGAAAAAGTGAATAATGTT+AGG + chr5.1:64808425-64808444 None:intergenic 25.0%
! GCTTAATTTCCTTCAAATTA+AGG + chr5.1:64807898-64807917 None:intergenic 25.0%
! GGGAAAAAATGTAATTTGAA+TGG + chr5.1:64809877-64809896 None:intergenic 25.0%
! GTACATTATTAAAGATTGGT+TGG + chr5.1:64809899-64809918 None:intergenic 25.0%
! TTAAAAAAGGAACAGCTAAA+AGG + chr5.1:64809583-64809602 None:intergenic 25.0%
! TTGCAATATTTGCATAACTT+GGG - chr5.1:64809039-64809058 MS.gene29649:CDS 25.0%
!! ACATTATTAAAGATTGGTTG+GGG + chr5.1:64809897-64809916 None:intergenic 25.0%
!! CAATCTTTTCATCATATTGA+AGG + chr5.1:64809224-64809243 None:intergenic 25.0%
!! TCGTTTTCATTATACCAATA+CGG + chr5.1:64807521-64807540 None:intergenic 25.0%
!! TCTGAATGATTTTCATATGA+AGG - chr5.1:64807922-64807941 MS.gene29649:intron 25.0%
!! TTTTACATTAAAGAGATTGC+AGG - chr5.1:64808860-64808879 MS.gene29649:CDS 25.0%
!!! AACGAGTAAAAAGTTTTTTC+AGG + chr5.1:64809689-64809708 None:intergenic 25.0%
!!! CATCTTGAATGTATTTTAAG+AGG + chr5.1:64808159-64808178 None:intergenic 25.0%
!!! TAAACTGATTTTGAATGTGT+AGG - chr5.1:64808294-64808313 MS.gene29649:intron 25.0%
!!! TGAAAAAAGTATTTCAACCT+AGG + chr5.1:64809634-64809653 None:intergenic 25.0%
!!! TGTTTTTATTCATCAATCCT+AGG - chr5.1:64809614-64809633 MS.gene29649:intron 25.0%
AAAGAATTTCTCGTAGTCAA+AGG + chr5.1:64806648-64806667 None:intergenic 30.0%
AAGATTGATATATGGTCACT+CGG - chr5.1:64809237-64809256 MS.gene29649:intron 30.0%
AGAAGAAACAGAGTTTGATT+TGG + chr5.1:64806756-64806775 None:intergenic 30.0%
ATCTGTTTCAACAACTTTGA+TGG + chr5.1:64808026-64808045 None:intergenic 30.0%
CAATGAATAAATGTTCCTGA+TGG + chr5.1:64808770-64808789 None:intergenic 30.0%
CCTGTAGATTCAAAAATAGA+TGG + chr5.1:64808475-64808494 None:intergenic 30.0%
CTGAAATAGAGAAATTGTGA+AGG - chr5.1:64808962-64808981 MS.gene29649:CDS 30.0%
CTTAATATTCTCGATAATGC+TGG - chr5.1:64808267-64808286 MS.gene29649:intron 30.0%
GAATTGTACATAGAAAGAAC+AGG - chr5.1:64808203-64808222 MS.gene29649:intron 30.0%
GATGAGGAATTAATTCCATA+TGG + chr5.1:64807404-64807423 None:intergenic 30.0%
GCAGAATTTATCAATCCATA+TGG - chr5.1:64807386-64807405 MS.gene29649:CDS 30.0%
GTCTCGTGAATGAAAAAAAT+AGG - chr5.1:64809729-64809748 MS.gene29649:intron 30.0%
GTTTCTGCAATTTCTACATT+TGG - chr5.1:64807075-64807094 MS.gene29649:CDS 30.0%
TAAGAAGCTTGATTTCATCT+AGG + chr5.1:64808683-64808702 None:intergenic 30.0%
TACTATGTGACAGAATATCT+CGG - chr5.1:64808555-64808574 MS.gene29649:CDS 30.0%
TCGTTGCTTATCAATTTGAA+TGG - chr5.1:64808924-64808943 MS.gene29649:CDS 30.0%
TGACATTTACTTCATAAACG+AGG - chr5.1:64809550-64809569 MS.gene29649:intron 30.0%
TGTGTCTATATGTACAATCT+CGG - chr5.1:64809169-64809188 MS.gene29649:CDS 30.0%
TTAAGGTAGCTAAAGTTCAA+AGG + chr5.1:64807881-64807900 None:intergenic 30.0%
TTACATGGACTTGTATACAT+GGG + chr5.1:64810086-64810105 None:intergenic 30.0%
TTCAAAAGATTATTGTCACG+GGG - chr5.1:64807772-64807791 MS.gene29649:CDS 30.0%
TTGAAACAGATCTACCAAAT+GGG - chr5.1:64808035-64808054 MS.gene29649:CDS 30.0%
! AAATCAAACTCTGTTTCTTC+TGG - chr5.1:64806755-64806774 MS.gene29649:intron 30.0%
! AACTTTGATGGTTAAGTCAT+AGG + chr5.1:64808014-64808033 None:intergenic 30.0%
! AATGTTTGGTCCTTTTGATA+TGG - chr5.1:64809478-64809497 MS.gene29649:intron 30.0%
! ACTTTGATGGTTAAGTCATA+GGG + chr5.1:64808013-64808032 None:intergenic 30.0%
! CTTTAGCTACCTTAATTTGA+AGG - chr5.1:64807886-64807905 MS.gene29649:intron 30.0%
! CTTTGAAGAAATTCAGTTAG+AGG - chr5.1:64807670-64807689 MS.gene29649:intron 30.0%
! TCAATTGCATGTTGTGTTTT+AGG - chr5.1:64807151-64807170 MS.gene29649:CDS 30.0%
!! CTTTTGATTAGAACGTTTTC+AGG + chr5.1:64809087-64809106 None:intergenic 30.0%
!! TATTTTTGAATCTACAGGAC+TGG - chr5.1:64808477-64808496 MS.gene29649:CDS 30.0%
!! TTATGACTATTTCTACCATC+AGG - chr5.1:64808752-64808771 MS.gene29649:CDS 30.0%
!!! CCATCTATTTTTGAATCTAC+AGG - chr5.1:64808472-64808491 MS.gene29649:CDS 30.0%
AAATTCAACCAAGAATCTGG+TGG - chr5.1:64808828-64808847 MS.gene29649:CDS 35.0%
AAATTGATAAGCAACGACGT+CGG + chr5.1:64808921-64808940 None:intergenic 35.0%
AATATTCTCGATAATGCTGG+TGG - chr5.1:64808270-64808289 MS.gene29649:intron 35.0%
AATTCCAGAAGAGACATCAT+TGG - chr5.1:64809946-64809965 MS.gene29649:CDS 35.0%
ACCAACATCTCCATATCAAA+AGG + chr5.1:64809491-64809510 None:intergenic 35.0%
ACTCAACTTGGATTATACTG+AGG - chr5.1:64809759-64809778 MS.gene29649:intron 35.0%
AGGTTACATAGACAAGTCAA+TGG - chr5.1:64807700-64807719 MS.gene29649:intron 35.0%
ATATGCAACATGAACCGTAT+TGG - chr5.1:64807504-64807523 MS.gene29649:CDS 35.0%
ATCATCACAACAGCATCATT+TGG + chr5.1:64809440-64809459 None:intergenic 35.0%
ATTATTATCCTCTCCATCTG+CGG + chr5.1:64808125-64808144 None:intergenic 35.0%
ATTCAGTTAGAGGAAGATGA+AGG - chr5.1:64807680-64807699 MS.gene29649:intron 35.0%
CAGAAATTCAACCAAGAATC+TGG - chr5.1:64808825-64808844 MS.gene29649:CDS 35.0%
CTCCAGATGAATGATTACAA+AGG + chr5.1:64807733-64807752 None:intergenic 35.0%
CTTTGACATCCAAAGAAATC+CGG + chr5.1:64807581-64807600 None:intergenic 35.0%
CTTTGTAATCATTCATCTGG+AGG - chr5.1:64807731-64807750 MS.gene29649:intron 35.0%
GACTGGATTTGAAGAAAACA+AGG - chr5.1:64808494-64808513 MS.gene29649:CDS 35.0%
GTTGAAACAGATCTACCAAA+TGG - chr5.1:64808034-64808053 MS.gene29649:CDS 35.0%
TCTGATAGATTGTCCCAATT+CGG - chr5.1:64807455-64807474 MS.gene29649:CDS 35.0%
TGCCTTTGTAATCATTCATC+TGG - chr5.1:64807728-64807747 MS.gene29649:intron 35.0%
! ATATGGAGATGTTGGTGAAA+GGG - chr5.1:64809495-64809514 MS.gene29649:intron 35.0%
! TCAGTATAATCCAAGTTGAG+TGG + chr5.1:64809760-64809779 None:intergenic 35.0%
! TCCTTTTGATATGGAGATGT+TGG - chr5.1:64809487-64809506 MS.gene29649:intron 35.0%
! TTCATGACTCCTGATTTTGA+TGG - chr5.1:64807554-64807573 MS.gene29649:CDS 35.0%
!! GTTGATTCAGAGTTCTTTTC+CGG - chr5.1:64809399-64809418 MS.gene29649:intron 35.0%
!! TTCAACGCTGTTTTGCTTTT+TGG - chr5.1:64806940-64806959 MS.gene29649:intron 35.0%
!!! CGAGAAATTCTTTTTTCCGA+TGG - chr5.1:64806655-64806674 MS.gene29649:CDS 35.0%
AAATCCGGTCCATCAAAATC+AGG + chr5.1:64807566-64807585 None:intergenic 40.0%
ACATAGTATCAGTGACCTGT+AGG + chr5.1:64809979-64809998 None:intergenic 40.0%
ACTTGTCAATAAGCATGACC+CGG - chr5.1:64808704-64808723 MS.gene29649:CDS 40.0%
AGTATGTGGTGTTTATCTCC+CGG + chr5.1:64808726-64808745 None:intergenic 40.0%
AGTCATAAAGACGCAGTATG+TGG + chr5.1:64808740-64808759 None:intergenic 40.0%
AGTTCCAATTGTGCTCAACT+CGG - chr5.1:64808518-64808537 MS.gene29649:CDS 40.0%
ATGATTCTTGCACGCATGAT+TGG - chr5.1:64809455-64809474 MS.gene29649:intron 40.0%
CAGATTAGAACGTACTTCAC+CGG + chr5.1:64809286-64809305 None:intergenic 40.0%
CATTACTCGACAATGTTTGG+AGG - chr5.1:64809014-64809033 MS.gene29649:CDS 40.0%
CTATGGCTCTTACAAGAACA+TGG - chr5.1:64809338-64809357 MS.gene29649:intron 40.0%
GATTCCCATCTGAAGATCAT+GGG + chr5.1:64808610-64808629 None:intergenic 40.0%
GCAATCTGAACTATGCTTCA+TGG + chr5.1:64807981-64808000 None:intergenic 40.0%
GCATAGTTCAGATTGCTACA+AGG - chr5.1:64807985-64808004 MS.gene29649:CDS 40.0%
GCTCATTACTCGACAATGTT+TGG - chr5.1:64809011-64809030 MS.gene29649:CDS 40.0%
GGAGTTCTTCACTCAAATCT+CGG + chr5.1:64808087-64808106 None:intergenic 40.0%
TAAGTTTGCACGCAGAAGTT+CGG + chr5.1:64808796-64808815 None:intergenic 40.0%
TCAAACTCCGCTCATTTACA+CGG - chr5.1:64806696-64806715 MS.gene29649:intron 40.0%
TTAACGTCAACCCCAAAAGA+AGG - chr5.1:64810023-64810042 MS.gene29649:CDS 40.0%
TTGTATACATGGGAAAGCCA+TGG + chr5.1:64810076-64810095 None:intergenic 40.0%
! ATAATCCAAGTTGAGTGGAG+TGG + chr5.1:64809755-64809774 None:intergenic 40.0%
! ATCATTCTGAGTCTGAGATG+AGG + chr5.1:64807420-64807439 None:intergenic 40.0%
! ATGTGTAGGAGACTAGTTGT+TGG - chr5.1:64808308-64808327 MS.gene29649:intron 40.0%
! GATATGGAGATGTTGGTGAA+AGG - chr5.1:64809494-64809513 MS.gene29649:intron 40.0%
! TTTGATGGACCGGATTTCTT+TGG - chr5.1:64807569-64807588 MS.gene29649:CDS 40.0%
!! GGAGAACAGTTTGTTAGCAT+CGG - chr5.1:64806776-64806795 MS.gene29649:intron 40.0%
!! TTAGAACGTTTTCAGGCTTC+AGG + chr5.1:64809080-64809099 None:intergenic 40.0%
AATTGTGCTCAACTCGGTCA+TGG - chr5.1:64808524-64808543 MS.gene29649:CDS 45.0%
AGAGCTCCTGAAGTGATGTT+AGG - chr5.1:64809198-64809217 MS.gene29649:CDS 45.0%
ATGCGCAACAGTGTCTTTCT+CGG + chr5.1:64807798-64807817 None:intergenic 45.0%
ATGCTTCACCACCAGATTCT+TGG + chr5.1:64808839-64808858 None:intergenic 45.0%
CAAGCCCATGATCTTCAGAT+GGG - chr5.1:64808603-64808622 MS.gene29649:CDS 45.0%
CCAAATGGGATCGAAAGCTA+TGG - chr5.1:64808049-64808068 MS.gene29649:CDS 45.0%
CCATAGCTTTCGATCCCATT+TGG + chr5.1:64808052-64808071 None:intergenic 45.0%
CGAGTAATGAGCTGCAAAGA+AGG + chr5.1:64809003-64809022 None:intergenic 45.0%
CGATTCCCATCTGAAGATCA+TGG + chr5.1:64808611-64808630 None:intergenic 45.0%
CGTTCTCGTGTTTCTTCTTC+AGG - chr5.1:64806818-64806837 MS.gene29649:intron 45.0%
CTATGCTTCATGGTAAGCAC+AGG + chr5.1:64807971-64807990 None:intergenic 45.0%
CTTGTCAATAAGCATGACCC+GGG - chr5.1:64808705-64808724 MS.gene29649:CDS 45.0%
GAAGAAACACGAGAACGAGA+AGG + chr5.1:64806815-64806834 None:intergenic 45.0%
GACAGGCACTAAAACATCCA+TGG - chr5.1:64810056-64810075 MS.gene29649:CDS 45.0%
GAGTGAAGAACTCCATGTTC+CGG - chr5.1:64808093-64808112 MS.gene29649:CDS 45.0%
GCACGCATGATTGGAATGTT+TGG - chr5.1:64809464-64809483 MS.gene29649:intron 45.0%
GTAAATGAGCGGAGTTTGAC+CGG + chr5.1:64806695-64806714 None:intergenic 45.0%
GTATGTGGTGTTTATCTCCC+GGG + chr5.1:64808725-64808744 None:intergenic 45.0%
TAGATTGTCCCAATTCGGCA+CGG - chr5.1:64807460-64807479 MS.gene29649:CDS 45.0%
TAGTATCAGTGACCTGTAGG+TGG + chr5.1:64809976-64809995 None:intergenic 45.0%
TCAAGCCCATGATCTTCAGA+TGG - chr5.1:64808602-64808621 MS.gene29649:CDS 45.0%
TGAAGGCCTAACATCACTTC+AGG + chr5.1:64809207-64809226 None:intergenic 45.0%
TGCTCCAATGATGTCTCTTC+TGG + chr5.1:64809953-64809972 None:intergenic 45.0%
TTTAGTGCCTGTCTTGCAGT+AGG + chr5.1:64810049-64810068 None:intergenic 45.0%
! ATGACCGAGTTGAGCACAAT+TGG + chr5.1:64808525-64808544 None:intergenic 45.0%
! ATGGTCACTCGGCTGTATTT+TGG - chr5.1:64809248-64809267 MS.gene29649:intron 45.0%
! CCATTTTGCAAAAGCAGTCC+AGG - chr5.1:64807830-64807849 MS.gene29649:CDS 45.0%
! CTTGCAGTAGGCCTTCTTTT+GGG + chr5.1:64810037-64810056 None:intergenic 45.0%
! TCTTGCAGTAGGCCTTCTTT+TGG + chr5.1:64810038-64810057 None:intergenic 45.0%
! TTGCAGTAGGCCTTCTTTTG+GGG + chr5.1:64810036-64810055 None:intergenic 45.0%
! TTTTTCATGTTGCTGCCACC+CGG - chr5.1:64809647-64809666 MS.gene29649:intron 45.0%
!! CCTGGACTGCTTTTGCAAAA+TGG + chr5.1:64807833-64807852 None:intergenic 45.0%
!! GACTCCTGATTTTGATGGAC+CGG - chr5.1:64807559-64807578 MS.gene29649:CDS 45.0%
!!! ATTTTGGCTGAGCTATGCTC+CGG - chr5.1:64809264-64809283 MS.gene29649:intron 45.0%
AAAAGCAGTCCAGGTTCAGG+AGG - chr5.1:64807839-64807858 MS.gene29649:CDS 50.0%
AAGAAGGCCTACTGCAAGAC+AGG - chr5.1:64810039-64810058 MS.gene29649:CDS 50.0%
AGGCATAATCCAACTCGACC+CGG + chr5.1:64809669-64809688 None:intergenic 50.0%
ATAGGCCACTCCACTCAACT+TGG - chr5.1:64809747-64809766 MS.gene29649:intron 50.0%
CGGTTCAGCTGCATTCAGTA+GGG - chr5.1:64808575-64808594 MS.gene29649:CDS 50.0%
CTACAAGAACCTCCTGAACC+TGG + chr5.1:64807851-64807870 None:intergenic 50.0%
GATAAGCAACGACGTCGGAT+AGG + chr5.1:64808916-64808935 None:intergenic 50.0%
TCGGTTCAGCTGCATTCAGT+AGG - chr5.1:64808574-64808593 MS.gene29649:CDS 50.0%
TGAAGAACTCCATGTTCCGG+AGG - chr5.1:64808096-64808115 MS.gene29649:CDS 50.0%
TGCAAAAGCAGTCCAGGTTC+AGG - chr5.1:64807836-64807855 MS.gene29649:CDS 50.0%
TTCAGGAGGTTCTTGTAGCG+AGG - chr5.1:64807853-64807872 MS.gene29649:intron 50.0%
TTTGGAGAATTGACCGTCGC+CGG + chr5.1:64806738-64806757 None:intergenic 50.0%
! ATCATTGGAGCACCACCTAC+AGG - chr5.1:64809961-64809980 MS.gene29649:CDS 50.0%
! CAGAGTTCTTTTCCGGCTTC+AGG - chr5.1:64809406-64809425 MS.gene29649:intron 50.0%
! TTTTCATGTTGCTGCCACCC+GGG - chr5.1:64809648-64809667 MS.gene29649:intron 50.0%
!! TTGGAAAGAGCACCTGAAGC+CGG + chr5.1:64809421-64809440 None:intergenic 50.0%
AATGAGCGGAGTTTGACCGG+AGG + chr5.1:64806692-64806711 None:intergenic 55.0%
ATAATCCAACTCGACCCGGG+TGG + chr5.1:64809665-64809684 None:intergenic 55.0%
GGCATAATCCAACTCGACCC+GGG + chr5.1:64809668-64809687 None:intergenic 55.0%
TCAACTCGGTCATGGCTGGA+AGG - chr5.1:64808532-64808551 MS.gene29649:CDS 55.0%
! GGAGATGTTGGTGAAAGGGC+AGG - chr5.1:64809499-64809518 MS.gene29649:intron 55.0%
AATCGCGTGCCGTGCCGAAT+TGG + chr5.1:64807472-64807491 None:intergenic 60.0%
AGTTTGACCGGAGGAGGTGG+AGG + chr5.1:64806683-64806702 None:intergenic 60.0%
ATCGCGTGCCGTGCCGAATT+GGG + chr5.1:64807471-64807490 None:intergenic 60.0%
CCGACGGCCGTGTAAATGAG+CGG + chr5.1:64806706-64806725 None:intergenic 60.0%
CCGCTCATTTACACGGCCGT+CGG - chr5.1:64806703-64806722 MS.gene29649:intron 60.0%
GATGGTTCCTCCACCTCCTC+CGG - chr5.1:64806673-64806692 MS.gene29649:CDS 60.0%
GGAGGAGGTGGAGGAACCAT+CGG + chr5.1:64806674-64806693 None:intergenic 60.0%
GTGCTCAACTCGGTCATGGC+TGG - chr5.1:64808528-64808547 MS.gene29649:CDS 60.0%
TCGCCGGAAGTCAACTCCGA+CGG + chr5.1:64806722-64806741 None:intergenic 60.0%
TCTCCATCTGCGGCAACCTC+CGG + chr5.1:64808115-64808134 None:intergenic 60.0%
! TCGGAGTTGACTTCCGGCGA+CGG - chr5.1:64806722-64806741 MS.gene29649:intron 60.0%
CGGAGTTTGACCGGAGGAGG+TGG + chr5.1:64806686-64806705 None:intergenic 65.0%
CTGCGGCAACCTCCGGAACA+TGG + chr5.1:64808108-64808127 None:intergenic 65.0%
GAGCGGAGTTTGACCGGAGG+AGG + chr5.1:64806689-64806708 None:intergenic 65.0%
GGAGGTTGCCGCAGATGGAG+AGG - chr5.1:64808114-64808133 MS.gene29649:CDS 65.0%
GTTCCGGAGGTTGCCGCAGA+TGG - chr5.1:64808109-64808128 MS.gene29649:CDS 65.0%
! CGGCCGTCGGAGTTGACTTC+CGG - chr5.1:64806716-64806735 MS.gene29649:intron 65.0%
TGCTGCCACCCGGGTCGAGT+TGG - chr5.1:64809657-64809676 MS.gene29649:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 64806527 64810105 64806527 ID=MS.gene29649
chr5.1 mRNA 64806527 64810105 64806527 ID=MS.gene29649.t1;Parent=MS.gene29649
chr5.1 exon 64809889 64810105 64809889 ID=MS.gene29649.t1.exon1;Parent=MS.gene29649.t1
chr5.1 CDS 64809889 64810105 64809889 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64808408 64809242 64808408 ID=MS.gene29649.t1.exon2;Parent=MS.gene29649.t1
chr5.1 CDS 64808408 64809242 64808408 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64807925 64808138 64807925 ID=MS.gene29649.t1.exon3;Parent=MS.gene29649.t1
chr5.1 CDS 64807925 64808138 64807925 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64807751 64807858 64807751 ID=MS.gene29649.t1.exon4;Parent=MS.gene29649.t1
chr5.1 CDS 64807751 64807858 64807751 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64807342 64807620 64807342 ID=MS.gene29649.t1.exon5;Parent=MS.gene29649.t1
chr5.1 CDS 64807342 64807620 64807342 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64807061 64807204 64807061 ID=MS.gene29649.t1.exon6;Parent=MS.gene29649.t1
chr5.1 CDS 64807061 64807204 64807061 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
chr5.1 exon 64806527 64806709 64806527 ID=MS.gene29649.t1.exon7;Parent=MS.gene29649.t1
chr5.1 CDS 64806527 64806709 64806527 ID=cds.MS.gene29649.t1;Parent=MS.gene29649.t1
Gene Sequence

>MS.gene29649

ATGGCTATGTCGAACAGTGTCGAAGCTGTGTTCGAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCAGCTCTAAGACAAGACATCATTGACAAGCACAACAATGATCTTGCTTCCTTTGACTACGAGAAATTCTTTTTTCCGATGGTTCCTCCACCTCCTCCGGTCAAACTCCGCTCATTTACACGGCCGTCGGAGTTGACTTCCGGCGACGGTCAATTCTCCAAATCAAACTCTGTTTCTTCTGGAGAACAGTTTGTTAGCATCGGTTCTTCTACTTCTCCTTCTCGTTCTCGTGTTTCTTCTTCAGGTTCTCTTTTCAATAATCGATTATTTATTGATTATGCTTAATTACTTCTTAATGATCGATTATCACTATGAGTTTCTAGTATTAGTGATTATGCTCTGTTTTCAACGCTGTTTTGCTTTTTGGTCAAAAACGAAGAAAGAATAGAGAATTAGTAATTATGATCGTTAATTCTGATTTTCTTGATTAATTAATATTTAGTTAGATTTTTTAAGAAGTGTTCTAAATTCTAATTCTAGTTTCTGCAATTTCTACATTTGGATCGCATAATTGATTAACCAAATTTGAATTTGTGTATTTGATTTAAGTTAATTTCAATTGCATGTTGTGTTTTAGGATTTAAAATTATTCATAGTTAATGTTTATATCTTATATATGATCTGCATTTTTATTTTTATTTTATTGAATTTATGTTTCCAAATTTGGATTATATTAAGCTTAGTTATTACCAAGAGTATTTTATATTTTTTTAATGAATTCAATTAATGTTGAAAATTTGTAATGCATAAAAATAGGAAATTATATAACCTAGATTTATTTATTTTTGTTGCAGAATTTATCAATCCATATGGAATTAATTCCTCATCTCAGACTCAGAATGATTCTGAATCTTCTTCATCTGATAGATTGTCCCAATTCGGCACGGCACGCGATTATCACGAATTCGATATGCAACATGAACCGTATTGGTATAATGAAAACGATGACGATGATGATTTCATGACTCCTGATTTTGATGGACCGGATTTCTTTGGATGTCAAAGTGAAGATAAGTTCATCTTGAATTCAGAAACAGAAAATCAACAAGATGATTCTCGTGATCTTCGTTACGACTTTGAAGAAATTCAGTTAGAGGAAGATGAAGGTTACATAGACAAGTCAATGGAGCAATGCCTTTGTAATCATTCATCTGGAGGTGATGAAAATGCGACTTATTCAAAAGATTATTGTCACGGGGCCGAGAAAGACACTGTTGCGCATAATTGTGAACTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGTAGCGAGGATCCTTTGAACTTTAGCTACCTTAATTTGAAGGAAATTAAGCTGAATCTGAATGATTTTCATATGAAGGATATTAATTCGTTTGAGTCTGTTCCTGTGCTTACCATGAAGCATAGTTCAGATTGCTACAAGGATCCCTATGACTTAACCATCAAAGTTGTTGAAACAGATCTACCAAATGGGATCGAAAGCTATGGAGTAAGAGATGACCGAGATTTGAGTGAAGAACTCCATGTTCCGGAGGTTGCCGCAGATGGAGAGGATAATAATACTGATGATGACCTCTTAAAATACATTCAAGATGATGAATATGAAGTATTTGAGCTAAGAATTGTACATAGAAAGAACAGGTTTGCTTGTTAATGATCTTGTGTCGTGAACTTTCATTTCTACTTAATATTCTCGATAATGCTGGTGGATAAACTGATTTTGAATGTGTAGGAGACTAGTTGTTGGTAAAATTTGAAATCAAATGCTTTTACTTTTCTTATTTTTAGCACTTCAACTTTTTTGTTTTTGTCATTAATTTAGTTCACCATGATTTTGACCTAACATTATTCACTTTTTCTCTTTAAGTATTCTGACAATAATTTTCTACCATCTATTTTTGAATCTACAGGACTGGATTTGAAGAAAACAAGGAAGTTCCAATTGTGCTCAACTCGGTCATGGCTGGAAGGTACTATGTGACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCCCATGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTCTTAAACTTGTCAATAAGCATGACCCGGGAGATAAACACCACATACTGCGTCTTTATGACTATTTCTACCATCAGGAACATTTATTCATTGTGACCGAACTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACATTAAAGAGATTGCAGGTTTGTTCAACTAGACTAATTAACTTTTGCACCTATCCGACGTCGTTGCTTATCAATTTGAATGGATTTTTTTTTTGGGTCTGAAATAGAGAAATTGTGAAGGCATTGTTGTTGTTATCCTTCTTTGCAGCTCATTACTCGACAATGTTTGGAGGCATTGCAATATTTGCATAACTTGGGAATTGTTCACTGCGACCTGAAGCCTGAAAACGTTCTAATCAAAAGTTACAAAAAATGTGAAATAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATCTGTGTCTATATGTACAATCTCGGTCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCACTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTACGTTCTAATCTGCATTTCTTATGATATTAATGAAATACATTTTTCTATGGCTCTTACAAGAACATGGTATTTTGATTTTCTTTCAAAGATTTCTTTTATATATTTGTTGATTCAGAGTTCTTTTCCGGCTTCAGGTGCTCTTTCCAAATGATGCTGTTGTGATGATTCTTGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAATATGACATTTACTTCATAAACGAGGTTTGTTTCCTTTTAGCTGTTCCTTTTTTAACATATTTCGTTTGTTTTTATTCATCAATCCTAGGTTGAAATACTTTTTTCATGTTGCTGCCACCCGGGTCGAGTTGGATTATGCCTGAAAAAACTTTTTACTCGTTAAACAATGTCTCAAATTCGAGTCTCGTGAATGAAAAAAATAGGCCACTCCACTCAACTTGGATTATACTGAGGATCTAGACCAAAAAAGAAAAGTATATATTAGTGTTGGTTATTCGCAATAAAGAAAATAAATGACCTTAGATTTATCAGAAAAATCAAGCCATCCATTCAAATTACATTTTTTCCCCAACCAATCTTTAATAATGTACACAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAGACATCATTGGAGCACCACCTACAGGTCACTGATACTATGTTTATTGACTTTGTCAGTTACTTGCTTAACGTCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCCATGTATACAAGTCCATGTAA
Protein sequence

>MS.gene29649.t1

MAMSNSVEAVFEFLRKNGLSEAESALRQDIIDKHNNDLASFDYEKFFFPMVPPPPPVKLRSFTRPSELTSGDEFINPYGINSSSQTQNDSESSSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDDFMTPDFDGPDFFGCQSEDKFILNSETENQQDDSRDLRYDFEEIQLEEDEGYIDKSMEQCLCNHSSGGDENATYSKDYCHGAEKDTVAHNCELPFCKSSPGSGGSCSEDPLNFSYLNLKEIKLNLNDFHMKDINSFESVPVLTMKHSSDCYKDPYDLTIKVVETDLPNGIESYGVRDDRDLSEELHVPEVAADGEDNNTDDDLLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNSVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQLITRQCLEALQYLHNLGIVHCDLKPENVLIKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFINEETDQLEYIIPEETSLEHHLQVTDTMFIDFVSYLLNVNPKRRPTARQALKHPWLSHVYKSM