AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29663

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29663.t1 MTR_5g082910 91.216 296 16 3 1 294 1 288 8.86e-180 497
MS.gene29663.t1 MTR_4g094982 69.369 111 34 0 16 126 2 112 6.38e-52 171
MS.gene29663.t1 MTR_5g016510 37.919 298 153 4 16 287 2 293 9.90e-52 172
MS.gene29663.t1 MTR_3g101290 71.154 104 30 0 16 119 34 137 1.19e-50 167
MS.gene29663.t1 MTR_4g019370 73.786 103 27 0 17 119 36 138 4.87e-50 169
MS.gene29663.t1 MTR_6g015455 65.138 109 38 0 16 124 2 110 3.37e-44 161
MS.gene29663.t1 MTR_3g110028 43.357 143 72 2 14 147 80 222 1.29e-34 133
MS.gene29663.t1 MTR_3g089045 49.123 114 58 0 7 120 4 117 1.83e-34 127
MS.gene29663.t1 MTR_6g027370 47.748 111 58 0 18 128 98 208 1.11e-33 126
MS.gene29663.t1 MTR_6g074860 50.000 110 52 1 19 125 4 113 1.75e-33 123
MS.gene29663.t1 MTR_1g026870 43.182 132 73 1 14 143 80 211 5.95e-33 128
MS.gene29663.t1 MTR_7g061330 46.341 123 62 1 14 136 72 190 2.08e-32 125
MS.gene29663.t1 MTR_7g061330 46.341 123 62 1 14 136 108 226 2.26e-32 125
MS.gene29663.t1 MTR_7g461410 46.341 123 62 1 14 136 108 226 2.26e-32 125
MS.gene29663.t1 MTR_5g041570 49.167 120 57 2 4 119 115 234 2.41e-32 124
MS.gene29663.t1 MTR_7g451170 53.846 104 48 0 16 119 188 291 3.25e-32 123
MS.gene29663.t1 MTR_3g077650 52.885 104 49 0 18 121 180 283 5.48e-32 123
MS.gene29663.t1 MTR_6g027340 40.164 122 73 0 7 128 4 125 1.44e-31 117
MS.gene29663.t1 MTR_7g037260 50.962 104 51 0 18 121 144 247 2.83e-31 120
MS.gene29663.t1 MTR_7g086960 50.980 102 50 0 19 120 89 190 7.51e-31 119
MS.gene29663.t1 MTR_6g027360 40.164 122 73 0 7 128 66 187 1.11e-30 117
MS.gene29663.t1 MTR_4g082040 49.020 102 52 0 18 119 104 205 1.66e-30 119
MS.gene29663.t1 MTR_4g105660 51.923 104 50 0 18 121 179 282 2.35e-30 118
MS.gene29663.t1 MTR_3g463400 42.742 124 71 0 18 141 132 255 3.82e-30 118
MS.gene29663.t1 MTR_5g010650 50.000 100 50 0 14 113 105 204 1.02e-29 117
MS.gene29663.t1 MTR_4g088015 50.962 104 51 0 18 121 220 323 1.58e-29 116
MS.gene29663.t1 MTR_5g049190 47.525 101 53 0 18 118 18 118 2.73e-29 112
MS.gene29663.t1 MTR_5g070020 47.115 104 55 0 18 121 121 224 3.67e-29 114
MS.gene29663.t1 MTR_5g042030 43.077 130 71 2 19 147 9 136 7.27e-29 112
MS.gene29663.t1 MTR_3g461490 36.970 165 94 4 16 178 10 166 1.44e-28 112
MS.gene29663.t1 MTR_7g037130 51.000 100 49 0 18 117 144 243 2.60e-28 112
MS.gene29663.t1 MTR_8g031360 44.715 123 62 4 19 138 15 134 2.68e-28 110
MS.gene29663.t1 MTR_8g042410 48.673 113 55 2 19 129 39 150 5.50e-28 113
MS.gene29663.t1 MTR_3g052450 42.336 137 73 2 19 154 42 173 1.15e-27 112
MS.gene29663.t1 MTR_7g076740 45.455 132 64 6 12 140 8 134 1.40e-27 108
MS.gene29663.t1 MTR_1g062940 46.729 107 54 2 15 119 4 109 2.18e-27 106
MS.gene29663.t1 MTR_1g057980 41.481 135 70 1 19 144 80 214 3.14e-27 107
MS.gene29663.t1 MTR_7g450950 49.000 100 51 0 18 117 156 255 5.11e-27 108
MS.gene29663.t1 MTR_8g095390 45.763 118 59 3 19 134 14 128 1.02e-26 107
MS.gene29663.t1 MTR_5g029840 44.800 125 63 4 12 134 8 128 1.04e-26 107
MS.gene29663.t1 MTR_3g011610 44.186 129 67 3 5 129 23 150 1.17e-26 109
MS.gene29663.t1 MTR_8g006470 50.926 108 49 3 19 124 12 117 1.29e-26 105
MS.gene29663.t1 MTR_3g028740 50.980 102 49 1 19 119 24 125 1.64e-26 106
MS.gene29663.t1 MTR_0008s0280 47.706 109 53 3 12 118 8 114 2.04e-26 103
MS.gene29663.t1 MTR_4g063100 43.363 113 61 2 19 129 9 120 2.08e-26 104
MS.gene29663.t1 MTR_3g052430 44.444 117 64 1 19 134 43 159 2.12e-26 108
MS.gene29663.t1 MTR_2g011660 43.443 122 65 3 14 134 11 129 2.37e-26 106
MS.gene29663.t1 MTR_2g034790 44.167 120 62 3 19 136 14 130 2.75e-26 105
MS.gene29663.t1 MTR_4g485530 45.714 105 56 1 16 119 11 115 2.81e-26 102
MS.gene29663.t1 MTR_4g091490 42.623 122 66 3 14 134 11 129 4.65e-26 105
MS.gene29663.t1 MTR_2g097910 46.429 112 59 1 19 129 22 133 4.89e-26 105
MS.gene29663.t1 MTR_7g087130 46.429 112 59 1 19 129 14 125 5.22e-26 105
MS.gene29663.t1 MTR_5g079670 47.059 102 53 1 19 119 13 114 5.39e-26 102
MS.gene29663.t1 MTR_4g121460 43.443 122 68 1 19 139 14 135 5.81e-26 105
MS.gene29663.t1 MTR_3g097450 38.732 142 72 4 19 146 14 154 8.02e-26 103
MS.gene29663.t1 MTR_5g007370 45.600 125 62 4 12 134 8 128 8.14e-26 103
MS.gene29663.t1 MTR_1g100653 43.363 113 63 1 19 130 14 126 9.80e-26 103
MS.gene29663.t1 MTR_7g011170 41.463 123 69 2 19 140 14 134 1.11e-25 103
MS.gene29663.t1 MTR_1g085040 50.485 103 48 2 19 119 14 115 1.27e-25 104
MS.gene29663.t1 MTR_1g085640 46.610 118 58 3 19 134 14 128 1.38e-25 105
MS.gene29663.t1 MTR_2g089620 43.548 124 66 3 12 134 8 128 2.21e-25 103
MS.gene29663.t1 MTR_4g065017 46.429 112 59 1 19 129 19 130 3.57e-25 103
MS.gene29663.t1 MTR_4g029540 46.400 125 60 4 13 135 6 125 3.94e-25 102
MS.gene29663.t1 MTR_7g035350 48.039 102 53 0 16 117 222 323 5.03e-25 104
MS.gene29663.t1 MTR_4g073420 46.602 103 52 2 19 119 14 115 6.38e-25 101
MS.gene29663.t1 MTR_4g478180 44.882 127 64 4 12 136 9 131 7.15e-25 102
MS.gene29663.t1 MTR_1g073170 46.602 103 52 2 19 119 22 123 7.46e-25 100
MS.gene29663.t1 MTR_7g110830 45.763 118 59 3 19 134 14 128 7.99e-25 102
MS.gene29663.t1 MTR_0063s0090 47.222 108 53 3 12 117 8 113 8.79e-25 99.8
MS.gene29663.t1 MTR_8g098860 48.624 109 52 3 14 119 8 115 8.82e-25 101
MS.gene29663.t1 MTR_1g045610 45.631 103 53 2 19 119 23 124 9.65e-25 100
MS.gene29663.t1 MTR_3g074520 34.940 166 101 5 12 175 8 168 1.27e-24 101
MS.gene29663.t1 MTR_4g082230 43.220 118 62 3 19 134 14 128 1.35e-24 102
MS.gene29663.t1 MTR_6g009430 40.323 124 68 4 19 140 14 133 1.68e-24 101
MS.gene29663.t1 MTR_2g064160 44.660 103 54 2 19 119 13 114 1.91e-24 100
MS.gene29663.t1 MTR_4g100720 42.718 103 56 2 19 119 15 116 1.93e-24 97.4
MS.gene29663.t1 MTR_5g088080 44.444 117 60 3 16 130 11 124 2.39e-24 99.4
MS.gene29663.t1 MTR_5g088150 44.444 117 60 3 16 130 11 124 2.39e-24 99.4
MS.gene29663.t1 MTR_5g488210 44.444 117 60 3 16 130 11 124 2.39e-24 99.4
MS.gene29663.t1 MTR_0008s0470 46.602 103 52 2 19 119 15 116 2.63e-24 99.8
MS.gene29663.t1 MTR_8g017440 46.789 109 54 3 14 119 8 115 2.67e-24 100
MS.gene29663.t1 MTR_5g088640 44.444 117 60 3 16 130 11 124 2.83e-24 99.4
MS.gene29663.t1 MTR_0008s0390 45.631 103 53 2 19 119 15 116 2.94e-24 99.4
MS.gene29663.t1 MTR_2g099740 46.789 109 54 3 14 119 8 115 3.47e-24 101
MS.gene29663.t1 MTR_5g488170 44.444 117 60 3 16 130 11 124 4.47e-24 98.2
MS.gene29663.t1 MTR_6g090405 44.643 112 60 2 19 128 14 125 5.08e-24 98.2
MS.gene29663.t1 MTR_4g105130 38.125 160 89 5 19 171 14 170 5.41e-24 100
MS.gene29663.t1 MTR_1g021230 48.148 108 53 2 19 124 59 165 5.66e-24 101
MS.gene29663.t1 MTR_5g010020 50.962 104 47 3 14 114 8 110 5.77e-24 99.8
MS.gene29663.t1 MTR_2g096380 44.660 103 54 2 19 119 8 109 6.62e-24 97.4
MS.gene29663.t1 MTR_5g088610 44.643 112 60 2 16 125 8 119 7.13e-24 99.8
MS.gene29663.t1 MTR_3g103570 46.602 103 53 2 19 119 14 116 9.43e-24 99.4
MS.gene29663.t1 MTR_4g102380 40.678 118 65 3 19 134 14 128 9.85e-24 97.8
MS.gene29663.t1 MTR_1g112760 41.667 120 65 3 19 136 15 131 1.10e-23 96.7
MS.gene29663.t1 MTR_0251s0050 44.660 103 54 2 19 119 15 116 1.18e-23 97.8
MS.gene29663.t1 MTR_1g017000 39.552 134 72 5 16 141 10 142 1.21e-23 97.4
MS.gene29663.t1 MTR_8g017540 46.789 109 54 3 14 119 54 161 1.30e-23 99.8
MS.gene29663.t1 MTR_7g117730 44.118 102 56 1 19 119 14 115 1.34e-23 97.1
MS.gene29663.t1 MTR_3g077110 41.463 123 67 3 19 139 14 133 1.70e-23 98.6
MS.gene29663.t1 MTR_6g012690 41.463 123 66 3 16 134 8 128 2.32e-23 98.6
MS.gene29663.t1 MTR_5g062790 43.590 117 61 3 16 130 8 121 3.16e-23 97.1
MS.gene29663.t1 MTR_2g089420 46.364 110 55 3 12 119 7 114 5.04e-23 98.6
MS.gene29663.t1 MTR_4g082290 41.026 117 66 2 19 134 14 128 5.57e-23 98.2
MS.gene29663.t1 MTR_0140s0030 46.078 102 54 1 19 119 15 116 8.68e-23 96.7
MS.gene29663.t1 MTR_0489s0020 46.078 102 54 1 19 119 15 116 8.68e-23 96.7
MS.gene29663.t1 MTR_8g020490 44.118 102 56 1 19 119 10 111 1.02e-22 94.7
MS.gene29663.t1 MTR_8g027345 45.098 102 55 1 19 119 14 115 1.04e-22 95.9
MS.gene29663.t1 MTR_2g088170 45.000 120 65 1 19 137 31 150 1.17e-22 97.4
MS.gene29663.t1 MTR_7g115650 42.718 103 56 2 19 119 14 115 1.18e-22 93.6
MS.gene29663.t1 MTR_1g100667 44.444 108 57 2 19 124 15 121 1.18e-22 95.1
MS.gene29663.t1 MTR_5g078140 39.516 124 67 4 16 134 8 128 1.70e-22 95.5
MS.gene29663.t1 MTR_5g014990 44.660 103 55 2 19 119 14 116 1.89e-22 95.1
MS.gene29663.t1 MTR_8g017500 45.872 109 55 3 14 119 8 115 2.09e-22 95.5
MS.gene29663.t1 MTR_2g089450 44.037 109 57 3 12 118 8 114 2.19e-22 94.0
MS.gene29663.t1 MTR_3g065440 40.496 121 64 4 16 131 8 125 2.26e-22 95.1
MS.gene29663.t1 MTR_7g035075 42.478 113 62 2 13 123 10 121 2.61e-22 92.4
MS.gene29663.t1 MTR_3g039990 46.078 102 54 1 19 119 15 116 2.66e-22 94.7
MS.gene29663.t1 MTR_1g043080 44.118 102 56 1 19 119 14 115 4.73e-22 93.2
MS.gene29663.t1 MTR_8g017340 46.154 104 52 3 19 119 14 116 5.19e-22 95.9
MS.gene29663.t1 MTR_7g096930 44.660 103 54 2 19 119 14 115 5.67e-22 93.2
MS.gene29663.t1 MTR_1g076150 43.689 103 55 2 19 119 14 115 5.83e-22 92.8
MS.gene29663.t1 MTR_7g010210 43.636 110 58 3 12 119 8 115 5.99e-22 93.2
MS.gene29663.t1 MTR_4g128670 48.980 98 48 2 19 114 14 111 6.88e-22 94.4
MS.gene29663.t1 MTR_1g043050 43.137 102 57 1 19 119 14 115 7.98e-22 92.4
MS.gene29663.t1 MTR_1g017140 44.660 103 55 2 19 119 14 116 8.59e-22 94.0
MS.gene29663.t1 MTR_6g012180 46.154 104 54 2 12 114 8 110 8.79e-22 93.6
MS.gene29663.t1 MTR_7g010210 43.636 110 58 3 12 119 8 115 9.95e-22 93.6
MS.gene29663.t1 MTR_8g017350 46.154 104 52 3 19 119 14 116 1.23e-21 95.1
MS.gene29663.t1 MTR_7g111290 49.485 97 46 2 19 113 14 109 1.41e-21 94.0
MS.gene29663.t1 MTR_8g017390 44.545 110 56 4 14 119 8 116 1.96e-21 94.0
MS.gene29663.t1 MTR_6g055910 42.056 107 59 2 19 123 16 121 2.44e-21 91.7
MS.gene29663.t1 MTR_1g110460 40.777 103 58 2 19 119 28 129 2.46e-21 92.0
MS.gene29663.t1 MTR_4g125520 33.099 142 85 3 19 155 14 150 3.68e-21 91.7
MS.gene29663.t1 MTR_4g097570 45.918 98 50 2 19 113 14 111 6.05e-21 90.9
MS.gene29663.t1 MTR_4g063100 47.436 78 41 0 52 129 14 91 7.38e-21 89.0
MS.gene29663.t1 MTR_6g006030 42.157 102 58 1 19 119 16 117 8.15e-21 88.6
MS.gene29663.t1 MTR_3g083540 41.748 103 57 2 19 119 43 144 8.51e-21 90.5
MS.gene29663.t1 MTR_7g102110 34.328 134 86 2 19 150 14 147 1.24e-20 89.4
MS.gene29663.t1 MTR_1g083630 45.000 120 64 2 6 124 2 120 1.41e-20 92.0
MS.gene29663.t1 MTR_2g067420 45.918 98 50 2 19 114 16 112 1.66e-20 90.1
MS.gene29663.t1 MTR_4g057635 42.453 106 59 2 19 122 14 119 1.74e-20 90.1
MS.gene29663.t1 MTR_4g097570 45.361 97 51 2 19 113 14 110 4.91e-20 88.2
MS.gene29663.t1 MTR_3g045430 34.815 135 83 3 8 140 4 135 1.58e-19 87.0
MS.gene29663.t1 MTR_0247s0040 40.385 104 53 2 19 117 9 108 1.76e-19 84.3
MS.gene29663.t1 MTR_7g109320 49.020 102 51 1 19 119 14 115 1.80e-19 87.4
MS.gene29663.t1 MTR_2g095520 45.918 98 51 2 19 114 14 111 1.86e-19 87.0
MS.gene29663.t1 MTR_5g079220 37.615 109 59 2 19 122 23 127 1.94e-19 86.3
MS.gene29663.t1 MTR_1g086510 44.211 95 52 1 19 112 23 117 4.75e-19 85.1
MS.gene29663.t1 MTR_8g060940 40.777 103 52 2 19 116 9 107 5.50e-19 84.3
MS.gene29663.t1 MTR_1g086530 43.750 96 51 2 19 112 35 129 6.33e-19 84.7
MS.gene29663.t1 MTR_5g079290 35.780 109 61 2 19 122 19 123 8.72e-19 84.3
MS.gene29663.t1 MTR_5g078800 37.736 106 57 2 19 119 9 110 8.77e-19 84.3
MS.gene29663.t1 MTR_5g078910 38.835 103 60 2 19 119 9 110 9.09e-19 84.7
MS.gene29663.t1 MTR_5g079120 39.623 106 55 2 19 119 63 164 1.53e-18 84.3
MS.gene29663.t1 MTR_5g078860 38.679 106 56 2 19 119 9 110 1.78e-18 84.0
MS.gene29663.t1 MTR_7g017260 37.963 108 56 2 19 119 27 130 1.84e-18 83.6
MS.gene29663.t1 MTR_2g096380 48.529 68 35 0 52 119 23 90 2.88e-18 82.0
MS.gene29663.t1 MTR_0193s0090 38.095 105 56 2 19 118 9 109 3.93e-18 81.3
MS.gene29663.t1 MTR_0197s0010 37.383 107 64 2 21 125 5 110 9.18e-18 80.9
MS.gene29663.t1 MTR_0001s0360 37.255 102 63 1 19 119 9 110 1.38e-17 80.9
MS.gene29663.t1 MTR_5g078950 37.500 104 56 2 19 117 9 108 2.70e-17 80.1
MS.gene29663.t1 MTR_2g033170 39.344 122 69 3 2 119 7 127 2.76e-17 80.9
MS.gene29663.t1 MTR_6g055910 45.833 72 39 0 52 123 21 92 3.03e-17 79.7
MS.gene29663.t1 MTR_5g078930 37.963 108 58 2 17 119 9 112 5.75e-17 78.2
MS.gene29663.t1 MTR_5g038910 32.075 106 71 1 21 125 28 133 6.25e-17 80.5
MS.gene29663.t1 MTR_8g468380 35.000 100 64 1 21 120 24 122 7.51e-17 80.5
MS.gene29663.t1 MTR_4g128190 41.071 112 53 3 8 118 2 101 8.17e-17 78.2
MS.gene29663.t1 MTR_7g111290 58.065 62 26 0 52 113 6 67 9.88e-17 79.7
MS.gene29663.t1 MTR_5g038910 32.075 106 71 1 21 125 28 133 1.06e-16 80.1
MS.gene29663.t1 MTR_4g123040 40.000 115 63 2 12 125 19 128 4.98e-16 77.4
MS.gene29663.t1 MTR_1g085880 39.316 117 68 3 12 125 6 122 8.04e-14 68.9
MS.gene29663.t1 MTR_1g008970 34.375 96 44 1 14 109 105 181 1.43e-13 69.3
MS.gene29663.t1 MTR_1g085770 38.655 119 70 3 12 127 6 124 1.56e-13 70.1
MS.gene29663.t1 MTR_7g061550 37.234 94 56 1 22 112 10 103 7.68e-13 68.6
MS.gene29663.t1 MTR_5g007300 39.362 94 49 3 1 92 53 140 3.95e-12 63.2
MS.gene29663.t1 MTR_4g063100 42.857 56 32 0 74 129 1 56 1.38e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29663.t1 AT3G50060 64.706 119 38 1 15 133 2 116 2.34e-49 166
MS.gene29663.t1 AT3G09230 71.154 104 30 0 16 119 52 155 9.15e-48 164
MS.gene29663.t1 AT3G55730 70.874 103 30 0 17 119 54 156 2.87e-47 163
MS.gene29663.t1 AT4G37260 66.964 112 37 0 8 119 2 113 5.01e-47 160
MS.gene29663.t1 AT5G67300 68.571 105 33 0 15 119 2 106 7.32e-47 159
MS.gene29663.t1 AT2G23290 70.192 104 31 0 16 119 10 113 1.38e-46 159
MS.gene29663.t1 AT2G39880 62.281 114 41 1 6 119 39 150 1.24e-44 155
MS.gene29663.t1 AT1G73410 53.465 101 47 0 19 119 6 106 2.31e-34 124
MS.gene29663.t1 AT1G73410 53.465 101 47 0 19 119 6 106 2.67e-34 125
MS.gene29663.t1 AT3G09370 45.522 134 69 1 14 147 130 259 9.53e-34 129
MS.gene29663.t1 AT1G17950 50.495 101 50 0 19 119 5 105 9.60e-34 124
MS.gene29663.t1 AT4G33450 40.645 155 79 3 19 171 19 162 9.64e-34 124
MS.gene29663.t1 AT3G09370 45.522 134 69 1 14 147 125 254 9.73e-34 129
MS.gene29663.t1 AT3G09370 45.522 134 69 1 14 147 138 267 1.15e-33 129
MS.gene29663.t1 AT5G17800 55.446 101 45 0 19 119 93 193 1.72e-33 125
MS.gene29663.t1 AT5G02320 46.400 125 63 1 14 138 62 182 2.96e-33 127
MS.gene29663.t1 AT5G02320 46.400 125 63 1 14 138 122 242 4.82e-33 127
MS.gene29663.t1 AT5G02320 46.400 125 63 1 14 138 122 242 4.82e-33 127
MS.gene29663.t1 AT4G32730 46.903 113 60 0 14 126 82 194 2.82e-31 123
MS.gene29663.t1 AT4G32730 46.903 113 60 0 14 126 82 194 2.85e-31 123
MS.gene29663.t1 AT4G32730 46.903 113 60 0 14 126 82 194 2.85e-31 123
MS.gene29663.t1 AT4G32730 46.903 113 60 0 14 126 82 194 2.85e-31 123
MS.gene29663.t1 AT4G32730 46.903 113 60 0 14 126 82 194 2.85e-31 123
MS.gene29663.t1 AT1G69560 41.727 139 68 2 8 135 96 232 3.32e-31 119
MS.gene29663.t1 AT1G69560 41.727 139 68 2 8 135 112 248 4.57e-31 119
MS.gene29663.t1 AT5G11510 42.478 113 65 0 14 126 76 188 7.52e-31 122
MS.gene29663.t1 AT5G11510 42.478 113 65 0 14 126 76 188 7.52e-31 122
MS.gene29663.t1 AT5G11510 42.478 113 65 0 14 126 76 188 7.52e-31 122
MS.gene29663.t1 AT5G11510 42.478 113 65 0 14 126 76 188 9.98e-31 122
MS.gene29663.t1 AT5G11510 42.478 113 65 0 14 126 76 188 1.10e-30 121
MS.gene29663.t1 AT5G11050 48.077 104 54 0 18 121 104 207 1.33e-30 119
MS.gene29663.t1 AT5G58850 46.154 104 56 0 18 121 104 207 1.63e-30 119
MS.gene29663.t1 AT1G26780 49.505 101 51 0 19 119 98 198 3.00e-30 115
MS.gene29663.t1 AT4G18770 50.980 102 50 0 18 119 216 317 4.49e-30 117
MS.gene29663.t1 AT5G40360 48.246 114 56 1 19 129 158 271 4.65e-30 116
MS.gene29663.t1 AT1G26780 49.505 101 51 0 19 119 98 198 8.35e-30 116
MS.gene29663.t1 AT3G11440 43.609 133 71 2 5 133 26 158 6.40e-29 115
MS.gene29663.t1 AT5G56110 40.458 131 75 2 19 148 14 142 6.99e-29 112
MS.gene29663.t1 AT4G00540 52.885 104 46 1 19 119 103 206 1.02e-28 114
MS.gene29663.t1 AT2G32460 50.467 107 52 1 19 124 20 126 1.05e-28 115
MS.gene29663.t1 AT2G32460 50.467 107 52 1 19 124 8 114 1.17e-28 114
MS.gene29663.t1 AT3G27785 50.000 104 52 0 18 121 188 291 1.61e-28 114
MS.gene29663.t1 AT3G11440 43.609 133 71 2 5 133 26 158 1.98e-28 114
MS.gene29663.t1 AT3G11440 43.609 133 71 2 5 133 26 158 1.98e-28 114
MS.gene29663.t1 AT3G11440 43.609 133 71 2 5 133 26 158 1.98e-28 114
MS.gene29663.t1 AT4G00540 52.885 104 46 1 19 119 101 204 2.07e-28 113
MS.gene29663.t1 AT1G74430 45.455 121 63 2 19 138 14 132 2.19e-28 110
MS.gene29663.t1 AT4G26930 49.107 112 56 1 19 129 21 132 2.83e-28 112
MS.gene29663.t1 AT3G29020 46.535 101 54 0 19 119 65 165 4.99e-28 108
MS.gene29663.t1 AT4G28110 45.161 124 64 3 12 134 8 128 5.79e-28 109
MS.gene29663.t1 AT5G06100 39.437 142 75 2 3 133 8 149 9.91e-28 111
MS.gene29663.t1 AT3G53200 49.057 106 51 2 19 122 11 115 1.14e-27 107
MS.gene29663.t1 AT3G29020 46.535 101 54 0 19 119 67 167 1.18e-27 109
MS.gene29663.t1 AT3G61250 42.748 131 69 4 19 146 14 141 1.59e-27 108
MS.gene29663.t1 AT3G08500 49.107 112 55 2 10 119 22 133 1.67e-27 109
MS.gene29663.t1 AT5G06100 39.437 142 75 2 3 133 8 149 2.00e-27 111
MS.gene29663.t1 AT5G06100 39.437 142 75 2 3 133 8 149 2.00e-27 111
MS.gene29663.t1 AT5G06100 39.437 142 75 2 3 133 8 149 2.00e-27 111
MS.gene29663.t1 AT5G06100 39.437 142 75 2 3 133 8 149 2.00e-27 111
MS.gene29663.t1 AT4G01680 47.826 115 55 3 19 131 14 125 8.56e-27 105
MS.gene29663.t1 AT5G55020 48.214 112 57 1 19 129 28 139 1.10e-26 109
MS.gene29663.t1 AT5G12870 49.020 102 51 1 19 119 20 121 1.43e-26 105
MS.gene29663.t1 AT1G18710 42.857 119 65 2 19 136 14 130 1.63e-26 105
MS.gene29663.t1 AT5G14750 34.091 176 96 5 8 169 6 175 1.74e-26 103
MS.gene29663.t1 AT4G38620 49.515 103 49 2 19 119 14 115 3.51e-26 104
MS.gene29663.t1 AT4G34990 44.068 118 61 3 19 134 14 128 3.62e-26 104
MS.gene29663.t1 AT2G16720 45.217 115 58 3 19 131 14 125 3.83e-26 104
MS.gene29663.t1 AT3G30210 45.794 107 55 2 19 123 29 134 4.31e-26 104
MS.gene29663.t1 AT3G46130 44.167 120 63 3 13 130 6 123 4.55e-26 103
MS.gene29663.t1 AT5G59780 38.065 155 90 3 19 171 10 160 5.25e-26 103
MS.gene29663.t1 AT4G01680 47.826 115 55 3 19 131 14 125 5.53e-26 105
MS.gene29663.t1 AT3G13890 38.889 144 84 3 14 154 8 150 8.25e-26 105
MS.gene29663.t1 AT5G10280 43.651 126 65 4 11 134 7 128 8.48e-26 104
MS.gene29663.t1 AT1G35515 44.118 102 56 1 19 119 14 115 8.73e-26 102
MS.gene29663.t1 AT4G05100 43.089 123 66 3 13 134 10 129 8.80e-26 104
MS.gene29663.t1 AT5G16770 44.000 125 64 4 12 134 8 128 1.02e-25 104
MS.gene29663.t1 AT5G16770 44.000 125 64 4 12 134 8 128 1.02e-25 104
MS.gene29663.t1 AT5G60890 46.602 103 52 2 19 119 14 115 1.06e-25 103
MS.gene29663.t1 AT4G09460 48.544 103 50 2 19 119 14 115 1.38e-25 102
MS.gene29663.t1 AT1G18570 44.348 115 59 3 19 131 15 126 1.50e-25 104
MS.gene29663.t1 AT5G16770 44.000 125 64 4 12 134 8 128 1.74e-25 103
MS.gene29663.t1 AT5G16770 44.000 125 64 4 12 134 8 128 1.74e-25 103
MS.gene29663.t1 AT1G74080 45.098 102 53 2 19 118 14 114 1.75e-25 103
MS.gene29663.t1 AT2G26960 44.715 123 62 3 7 124 7 128 1.91e-25 105
MS.gene29663.t1 AT1G25340 42.478 113 62 2 9 119 10 121 2.02e-25 102
MS.gene29663.t1 AT1G57560 44.068 118 61 3 19 134 14 128 2.52e-25 102
MS.gene29663.t1 AT5G40330 39.844 128 69 3 19 139 14 140 2.76e-25 100
MS.gene29663.t1 AT2G25230 41.071 112 66 0 19 130 26 137 3.07e-25 101
MS.gene29663.t1 AT4G21440 42.742 124 67 3 12 134 8 128 3.11e-25 103
MS.gene29663.t1 AT1G22640 46.602 103 52 2 19 119 14 115 3.25e-25 101
MS.gene29663.t1 AT1G57560 44.068 118 61 3 19 134 14 128 3.29e-25 102
MS.gene29663.t1 AT5G07690 44.068 118 61 3 19 134 14 128 3.38e-25 103
MS.gene29663.t1 AT1G09540 48.544 103 50 2 19 119 14 115 3.96e-25 103
MS.gene29663.t1 AT4G17785 38.889 144 77 4 12 147 8 148 4.03e-25 103
MS.gene29663.t1 AT5G61420 42.623 122 65 3 19 138 14 132 4.47e-25 103
MS.gene29663.t1 AT4G13480 46.602 103 52 2 19 119 8 109 5.90e-25 100
MS.gene29663.t1 AT3G60460 48.148 108 52 3 19 124 13 118 6.27e-25 101
MS.gene29663.t1 AT1G08810 49.020 102 51 1 19 119 14 115 6.76e-25 101
MS.gene29663.t1 AT3G27920 36.879 141 82 3 13 147 10 149 6.85e-25 100
MS.gene29663.t1 AT3G13890 37.500 152 84 3 14 154 8 159 7.20e-25 102
MS.gene29663.t1 AT1G25340 41.441 111 61 1 9 119 10 116 7.60e-25 101
MS.gene29663.t1 AT4G17785 38.889 144 77 4 12 147 8 148 7.65e-25 102
MS.gene29663.t1 AT5G07700 41.803 122 66 3 19 138 14 132 8.74e-25 102
MS.gene29663.t1 AT5G07700 41.803 122 66 3 19 138 14 132 8.74e-25 102
MS.gene29663.t1 AT1G25340 41.441 111 61 1 9 119 10 116 8.88e-25 101
MS.gene29663.t1 AT3G02940 42.400 125 66 4 12 134 8 128 9.46e-25 101
MS.gene29663.t1 AT1G56160 47.706 109 53 3 16 121 12 119 9.96e-25 101
MS.gene29663.t1 AT3G28470 43.220 118 62 3 19 134 14 128 1.21e-24 101
MS.gene29663.t1 AT5G65230 41.860 129 69 4 8 134 4 128 1.38e-24 100
MS.gene29663.t1 AT3G02940 42.400 125 66 4 12 134 8 128 1.62e-24 100
MS.gene29663.t1 AT3G02940 42.400 125 66 4 12 134 8 128 1.62e-24 100
MS.gene29663.t1 AT3G48920 49.020 102 49 2 19 118 20 120 2.35e-24 99.4
MS.gene29663.t1 AT5G52600 39.850 133 70 4 19 142 14 145 2.59e-24 97.8
MS.gene29663.t1 AT1G63910 48.148 108 54 2 14 119 8 115 2.89e-24 101
MS.gene29663.t1 AT4G01680 43.307 127 55 3 19 131 14 137 3.37e-24 100
MS.gene29663.t1 AT3G12720 45.631 103 53 2 19 119 24 125 4.84e-24 99.4
MS.gene29663.t1 AT5G54230 41.176 119 67 2 19 136 14 130 6.32e-24 99.4
MS.gene29663.t1 AT3G24310 45.631 103 53 2 19 119 20 121 8.03e-24 98.2
MS.gene29663.t1 AT5G15310 41.880 117 65 2 19 134 14 128 8.66e-24 99.0
MS.gene29663.t1 AT5G26660 41.732 127 69 3 19 143 14 137 9.53e-24 99.4
MS.gene29663.t1 AT2G47190 43.590 117 63 2 5 119 8 123 9.58e-24 98.2
MS.gene29663.t1 AT5G15310 41.880 117 65 2 19 134 14 128 9.90e-24 99.0
MS.gene29663.t1 AT1G16490 44.762 105 57 1 19 122 16 120 1.02e-23 97.8
MS.gene29663.t1 AT3G62610 42.241 116 66 1 19 133 14 129 1.40e-23 99.0
MS.gene29663.t1 AT5G15310 41.880 117 65 2 19 134 14 128 1.41e-23 97.1
MS.gene29663.t1 AT3G01140 42.982 114 62 2 19 131 14 125 2.26e-23 98.2
MS.gene29663.t1 AT1G06180 45.631 103 53 2 19 119 14 115 2.70e-23 96.3
MS.gene29663.t1 AT3G01140 42.982 114 62 2 19 131 57 168 2.89e-23 98.6
MS.gene29663.t1 AT1G34670 40.323 124 70 3 12 134 8 128 3.63e-23 98.2
MS.gene29663.t1 AT4G12350 39.831 118 66 3 19 134 14 128 3.74e-23 96.7
MS.gene29663.t1 AT5G35550 45.631 103 53 2 19 119 16 117 5.57e-23 95.5
MS.gene29663.t1 AT3G13540 39.200 125 73 2 19 142 25 147 5.64e-23 95.5
MS.gene29663.t1 AT5G39700 42.424 99 57 0 20 118 57 155 6.50e-23 94.0
MS.gene29663.t1 AT1G74650 46.078 102 54 1 19 119 14 115 6.70e-23 96.7
MS.gene29663.t1 AT5G62470 43.564 101 57 0 19 119 14 114 8.20e-23 97.1
MS.gene29663.t1 AT3G23250 43.689 103 55 2 19 119 14 115 8.93e-23 95.5
MS.gene29663.t1 AT3G12820 45.631 103 53 2 19 119 16 117 1.06e-22 94.4
MS.gene29663.t1 AT4G22680 39.831 118 66 3 19 134 14 128 1.62e-22 94.7
MS.gene29663.t1 AT2G31180 42.056 107 61 1 19 124 14 120 1.85e-22 94.0
MS.gene29663.t1 AT5G49330 45.045 111 59 2 19 128 14 123 2.14e-22 95.5
MS.gene29663.t1 AT3G28910 44.954 109 58 2 12 119 8 115 2.92e-22 95.1
MS.gene29663.t1 AT1G66230 38.710 124 68 4 16 134 8 128 3.00e-22 94.4
MS.gene29663.t1 AT1G79180 44.660 103 54 2 19 119 16 117 3.46e-22 94.4
MS.gene29663.t1 AT3G53200 54.930 71 32 0 52 122 12 82 4.38e-22 92.0
MS.gene29663.t1 AT3G47600 45.098 102 55 1 19 119 14 115 4.47e-22 94.7
MS.gene29663.t1 AT5G62470 45.098 102 55 1 19 119 14 115 5.86e-22 94.4
MS.gene29663.t1 AT5G14340 38.983 118 67 3 19 134 26 140 6.13e-22 93.2
MS.gene29663.t1 AT3G27810 43.443 122 61 3 19 138 22 137 8.09e-22 91.7
MS.gene29663.t1 AT4G37780 44.660 103 55 2 19 119 14 116 1.53e-21 92.8
MS.gene29663.t1 AT2G36890 43.636 110 58 3 19 125 14 122 1.80e-21 92.4
MS.gene29663.t1 AT2G36890 43.636 110 58 3 19 125 55 163 2.09e-21 92.8
MS.gene29663.t1 AT5G16600 39.516 124 67 4 16 134 8 128 2.11e-21 92.8
MS.gene29663.t1 AT2G47460 43.137 102 57 1 19 119 14 115 2.14e-21 93.2
MS.gene29663.t1 AT5G65790 44.660 103 55 2 19 119 14 116 2.27e-21 93.2
MS.gene29663.t1 AT5G59780 38.235 136 77 2 36 171 11 139 4.53e-21 89.4
MS.gene29663.t1 AT5G40350 44.118 102 54 2 19 118 19 119 4.67e-21 89.4
MS.gene29663.t1 AT5G52260 44.660 103 54 2 19 119 14 115 5.74e-21 90.5
MS.gene29663.t1 AT1G68320 40.777 103 58 2 19 119 21 122 5.90e-21 90.9
MS.gene29663.t1 AT5G23000 38.028 142 77 5 19 152 14 152 5.94e-21 91.3
MS.gene29663.t1 AT4G25560 43.689 103 55 2 19 119 12 113 7.10e-21 90.5
MS.gene29663.t1 AT2G26950 42.593 108 51 3 18 120 17 118 8.17e-21 91.7
MS.gene29663.t1 AT3G49690 43.689 103 56 2 19 119 14 116 1.03e-20 90.5
MS.gene29663.t1 AT3G01530 41.818 110 61 2 12 119 20 128 1.16e-20 88.2
MS.gene29663.t1 AT5G40430 41.346 104 60 1 15 118 50 152 2.14e-20 88.6
MS.gene29663.t1 AT3G46130 48.101 79 41 0 52 130 23 101 2.45e-20 87.8
MS.gene29663.t1 AT5G57620 43.689 103 56 2 19 119 14 116 2.48e-20 89.7
MS.gene29663.t1 AT3G46130 48.101 79 41 0 52 130 13 91 2.91e-20 87.4
MS.gene29663.t1 AT5G14750 51.471 68 33 0 52 119 18 85 6.81e-20 85.1
MS.gene29663.t1 AT1G48000 40.594 101 59 1 19 118 34 134 3.63e-19 85.1
MS.gene29663.t1 AT5G26660 44.565 92 49 1 52 143 17 106 5.96e-19 85.9
MS.gene29663.t1 AT5G62320 40.541 111 54 3 19 119 15 123 1.61e-18 83.2
MS.gene29663.t1 AT3G27810 49.425 87 39 1 52 138 7 88 2.77e-18 80.9
MS.gene29663.t1 AT5G35550 54.412 68 31 0 52 119 53 120 4.69e-18 82.4
MS.gene29663.t1 AT3G12820 52.941 68 32 0 52 119 2 69 4.94e-18 80.5
MS.gene29663.t1 AT1G79180 34.074 135 55 1 19 119 16 150 5.17e-18 83.2
MS.gene29663.t1 AT2G02820 34.343 99 65 0 21 119 32 130 8.20e-18 82.8
MS.gene29663.t1 AT2G02820 34.343 99 65 0 21 119 32 130 2.25e-17 82.4
MS.gene29663.t1 AT3G06490 41.739 115 63 3 7 119 10 122 2.29e-17 81.3
MS.gene29663.t1 AT2G02820 34.343 99 65 0 21 119 32 130 2.45e-17 82.4
MS.gene29663.t1 AT5G40350 52.239 67 32 0 52 118 8 74 2.61e-17 78.2
MS.gene29663.t1 AT1G14350 34.343 99 65 0 21 119 27 125 3.21e-17 81.6
MS.gene29663.t1 AT1G14350 34.343 99 65 0 21 119 27 125 3.21e-17 81.6
MS.gene29663.t1 AT1G66370 31.159 138 82 4 19 148 10 142 6.88e-17 78.6
MS.gene29663.t1 AT1G66380 32.824 131 78 3 19 143 10 136 1.47e-16 75.1
MS.gene29663.t1 AT5G49620 38.532 109 66 1 12 119 21 129 3.40e-16 77.8
MS.gene29663.t1 AT3G47600 48.529 68 35 0 52 119 42 109 5.76e-16 77.4
MS.gene29663.t1 AT1G56650 31.111 135 78 3 19 142 10 140 1.65e-15 75.1
MS.gene29663.t1 AT3G18100 40.426 94 56 0 19 112 498 591 9.56e-15 75.1
MS.gene29663.t1 AT3G18100 40.426 94 56 0 19 112 546 639 1.08e-14 74.7
MS.gene29663.t1 AT3G18100 40.426 94 56 0 19 112 333 426 1.40e-14 74.3
MS.gene29663.t1 AT3G18100 40.426 94 56 0 19 112 385 478 1.56e-14 74.3
MS.gene29663.t1 AT1G66390 31.387 137 83 3 19 148 10 142 3.84e-14 71.2
MS.gene29663.t1 AT1G71030 44.615 65 36 0 55 119 5 69 8.71e-13 65.9
MS.gene29663.t1 AT5G49620 34.146 123 66 2 12 119 21 143 9.10e-13 68.2
MS.gene29663.t1 AT1G71030 44.615 65 36 0 55 119 19 83 1.04e-12 66.2
MS.gene29663.t1 AT1G66380 35.484 93 59 1 52 143 11 103 1.42e-12 63.5
MS.gene29663.t1 AT1G22640 49.123 57 29 0 63 119 2 58 1.72e-12 65.5
MS.gene29663.t1 AT5G14750 45.614 57 31 0 63 119 2 58 2.60e-12 63.5
MS.gene29663.t1 AT5G14750 45.614 57 31 0 63 119 2 58 2.60e-12 63.5
MS.gene29663.t1 AT2G37630 35.354 99 61 1 17 112 2 100 5.73e-12 65.9
MS.gene29663.t1 AT5G59780 35.714 98 60 1 74 171 1 95 9.98e-12 62.8
MS.gene29663.t1 AT3G46130 45.614 57 31 0 74 130 1 57 1.29e-11 62.8
MS.gene29663.t1 AT1G18960 33.654 104 65 3 17 119 8 108 3.47e-11 63.2
MS.gene29663.t1 AT3G23250 44.828 58 32 0 62 119 1 58 8.82e-11 61.2

Find 81 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCCTCCGCCGGTGTAAA+AGG 0.293260 5.1:-65076342 None:intergenic
TTACGACGGTGATTATTATA+AGG 0.303478 5.1:+65076614 MS.gene29663:CDS
AACGGAATCCCCGGTCGTTC+TGG 0.325808 5.1:+65076264 MS.gene29663:CDS
TTCATCACCACCATTTGAAT+TGG 0.344280 5.1:-65076142 None:intergenic
TTATAAACGTCCTTGTGTTA+TGG 0.349334 5.1:+65076659 MS.gene29663:CDS
ATTGAAGCACATGCAGTTCA+TGG 0.355261 5.1:+65076372 MS.gene29663:CDS
CACTTTCTAAGTGTTGAATC+AGG 0.358447 5.1:-65076987 None:intergenic
ACGATTTCTCGTCTTCTTCC+AGG 0.363590 5.1:+65076408 MS.gene29663:CDS
GCATGATAGCAGAGGAAGTT+AGG 0.373360 5.1:+65076925 MS.gene29663:CDS
TCAAATGGTGGTGATGAAAA+TGG 0.378520 5.1:+65076147 MS.gene29663:CDS
GATGATGACGCAGGGAATAA+AGG 0.383743 5.1:+65076738 MS.gene29663:CDS
GTGATAAAGTGAAGGGTTCA+TGG 0.392662 5.1:+65076169 MS.gene29663:CDS
AGGAAAACGGTGCAAGAAAC+TGG 0.405900 5.1:+65076229 MS.gene29663:CDS
ACCGGTGGAACCGTTGTAAC+CGG 0.417169 5.1:-65076510 None:intergenic
ATTCCCACCGGTGTGATAAC+CGG 0.422805 5.1:+65076573 MS.gene29663:CDS
AGATGAAACATTGGTGAAAC+TGG 0.427247 5.1:+65076203 MS.gene29663:CDS
CTTTGAACAACCGTTGCAAC+CGG 0.434972 5.1:-65076528 None:intergenic
ACGGAATCCCCGGTCGTTCT+GGG 0.435316 5.1:+65076265 MS.gene29663:CDS
ATGCAGTTCATGGAAACAAA+TGG 0.435359 5.1:+65076382 MS.gene29663:CDS
AACTCTCCGCCGTCGTCGCA+CGG 0.450623 5.1:+65076467 MS.gene29663:CDS
GATAACATGCGCCTTGGTGG+TGG 0.451447 5.1:+65076957 MS.gene29663:CDS
GGCTCTTGCAGCGGTTTCAC+CGG 0.460836 5.1:+65076491 MS.gene29663:CDS
AAGGGTTCCAACGGCGGTGC+CGG 0.461128 5.1:+65076548 MS.gene29663:CDS
CGGTTGCAACGGTTGTTCAA+AGG 0.465093 5.1:+65076529 MS.gene29663:CDS
CAAGAGCCGCCGTGCGACGA+CGG 0.472586 5.1:-65076476 None:intergenic
GGTTGCAACGGTTGTTCAAA+GGG 0.473960 5.1:+65076530 MS.gene29663:CDS
ATCACACCGGTGGGAATCAC+CGG 0.476511 5.1:-65076567 None:intergenic
AGTGAAAATTCCAATTCAAA+TGG 0.476613 5.1:+65076132 MS.gene29663:CDS
TATAAGGATTTGTTGAGTCT+CGG 0.499886 5.1:+65076630 MS.gene29663:CDS
GCAAGACTTCCCAGAACGAC+CGG 0.501357 5.1:-65076274 None:intergenic
GTCACGTGACGGTGAAGAAA+CGG 0.504415 5.1:+65076707 MS.gene29663:CDS
ACCGGTTACAACGGTTCCAC+CGG 0.509986 5.1:+65076509 MS.gene29663:CDS
AACGGTTCCACCGGTTGCAA+CGG 0.511374 5.1:+65076518 MS.gene29663:CDS
ATAAAGGTGTTAACGTGGTT+AGG 0.512437 5.1:+65076754 MS.gene29663:CDS
ATCGCGTTGTCTGTTCTACC+TGG 0.514284 5.1:-65076426 None:intergenic
TGCAGTTCATGGAAACAAAT+GGG 0.515010 5.1:+65076383 MS.gene29663:CDS
GGAATCACCGGCACCGCCGT+TGG 0.524579 5.1:-65076555 None:intergenic
GTGAAACTGGTAAAGGAAAA+CGG 0.530100 5.1:+65076216 MS.gene29663:CDS
TCTTCTTCTTTCAGAAAACC+AGG 0.531221 5.1:-65076798 None:intergenic
GTTGATAACATGCGCCTTGG+TGG 0.538563 5.1:+65076954 MS.gene29663:CDS
CAAGACTTCCCAGAACGACC+GGG 0.539420 5.1:-65076273 None:intergenic
AAAGGAAAGTGTTGAACGGT+TGG 0.545701 5.1:-65076324 None:intergenic
GGAAGTCTTGCCGTCTGCGG+TGG 0.545828 5.1:+65076286 MS.gene29663:CDS
TCGCACGGCGGCTCTTGCAG+CGG 0.549045 5.1:+65076482 MS.gene29663:CDS
TCGTTAAGTTTGTTTCCACC+TGG 0.549818 5.1:+65076780 MS.gene29663:CDS
GTGATAAGCAACGGAATCCC+CGG 0.556212 5.1:+65076255 MS.gene29663:CDS
TGAACAACCGTTGCAACCGG+TGG 0.559619 5.1:-65076525 None:intergenic
AACATTGGTGAAACTGGTAA+AGG 0.560058 5.1:+65076209 MS.gene29663:CDS
ATAACATGCGCCTTGGTGGT+GGG 0.567081 5.1:+65076958 MS.gene29663:CDS
CTGGGAAGTCTTGCCGTCTG+CGG 0.576361 5.1:+65076283 MS.gene29663:CDS
TAAAACTGAAGATGAAACAT+TGG 0.578358 5.1:+65076194 MS.gene29663:CDS
GAGAATAATAGCGGGTCACG+TGG 0.581994 5.1:+65076684 MS.gene29663:CDS
GAAAATTCCAATTCAAATGG+TGG 0.587306 5.1:+65076135 MS.gene29663:CDS
AACTGGTCTGTGATAAGCAA+CGG 0.591578 5.1:+65076246 MS.gene29663:CDS
GAGCCGCCGTGCGACGACGG+CGG 0.592018 5.1:-65076473 None:intergenic
GCGGTGCCGGTGATTCCCAC+CGG 0.594901 5.1:+65076561 MS.gene29663:CDS
TGTTCAAAGGGTTCCAACGG+CGG 0.597209 5.1:+65076542 MS.gene29663:CDS
TATGTTGATAACATGCGCCT+TGG 0.597244 5.1:+65076951 MS.gene29663:CDS
ATGATGATGTTATCCTCCGC+CGG 0.600301 5.1:-65076351 None:intergenic
GCTGATTACACCACCGCAGA+CGG 0.606009 5.1:-65076296 None:intergenic
GGTTGTTCAAAGGGTTCCAA+CGG 0.607530 5.1:+65076539 MS.gene29663:CDS
AGCGGTTTCACCGGTTACAA+CGG 0.623845 5.1:+65076500 MS.gene29663:CDS
TGAAAATGGTGATAAAGTGA+AGG 0.624446 5.1:+65076161 MS.gene29663:CDS
GAAAATGGTGATAAAGTGAA+GGG 0.628856 5.1:+65076162 MS.gene29663:CDS
GTTATGGTTGAGAATAATAG+CGG 0.638175 5.1:+65076675 MS.gene29663:CDS
TTTCCGGTTATCACACCGGT+GGG 0.639604 5.1:-65076576 None:intergenic
TCTTCTTTCAGAAAACCAGG+TGG 0.639884 5.1:-65076795 None:intergenic
TTATGGTTGAGAATAATAGC+GGG 0.641955 5.1:+65076676 MS.gene29663:CDS
GGGTCACGTGGGTCACGTGA+CGG 0.646108 5.1:+65076696 MS.gene29663:CDS
AGAATAATAGCGGGTCACGT+GGG 0.660707 5.1:+65076685 MS.gene29663:CDS
GTAACGGAAGATGATGACGC+AGG 0.670273 5.1:+65076729 MS.gene29663:CDS
TAACGGAAGATGATGACGCA+GGG 0.671779 5.1:+65076730 MS.gene29663:CDS
CAGGAGCAAACCCACCACCA+AGG 0.672680 5.1:-65076968 None:intergenic
TTATTCTCAACCATAACACA+AGG 0.679685 5.1:-65076669 None:intergenic
AAGACTTCCCAGAACGACCG+GGG 0.681485 5.1:-65076272 None:intergenic
TCTTCAGCGCATGATAGCAG+AGG 0.681841 5.1:+65076917 MS.gene29663:CDS
TGACGGTGAAGAAACGGTAA+CGG 0.688161 5.1:+65076713 MS.gene29663:CDS
TGTAAAAGGAAAGTGTTGAA+CGG 0.698355 5.1:-65076328 None:intergenic
CGTGTGAATGAAAGTTACGA+CGG 0.718108 5.1:+65076600 MS.gene29663:CDS
AGGGAATAAAGGTGTTAACG+TGG 0.740809 5.1:+65076749 MS.gene29663:CDS
TCTCCGCCGTCGTCGCACGG+CGG 0.756035 5.1:+65076470 MS.gene29663:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTGAAAATTCCAATTCAAA+TGG + chr5.1:65076132-65076151 MS.gene29663:CDS 25.0%
! TAAAACTGAAGATGAAACAT+TGG + chr5.1:65076194-65076213 MS.gene29663:CDS 25.0%
! TACTGAAAAATGAGAAATTG+AGG + chr5.1:65076889-65076908 MS.gene29663:CDS 25.0%
GAAAAATGAGAAATTGAGGT+CGG + chr5.1:65076893-65076912 MS.gene29663:CDS 30.0%
GAAAATGGTGATAAAGTGAA+GGG + chr5.1:65076162-65076181 MS.gene29663:CDS 30.0%
GAAAATTCCAATTCAAATGG+TGG + chr5.1:65076135-65076154 MS.gene29663:CDS 30.0%
GTTATGGTTGAGAATAATAG+CGG + chr5.1:65076675-65076694 MS.gene29663:CDS 30.0%
TGAAAATGGTGATAAAGTGA+AGG + chr5.1:65076161-65076180 MS.gene29663:CDS 30.0%
TTACGACGGTGATTATTATA+AGG + chr5.1:65076614-65076633 MS.gene29663:CDS 30.0%
TTATAAACGTCCTTGTGTTA+TGG + chr5.1:65076659-65076678 MS.gene29663:CDS 30.0%
TTATGGTTGAGAATAATAGC+GGG + chr5.1:65076676-65076695 MS.gene29663:CDS 30.0%
TTATTCTCAACCATAACACA+AGG - chr5.1:65076672-65076691 None:intergenic 30.0%
!! TATAAGGATTTGTTGAGTCT+CGG + chr5.1:65076630-65076649 MS.gene29663:CDS 30.0%
!! TGTAAAAGGAAAGTGTTGAA+CGG - chr5.1:65076331-65076350 None:intergenic 30.0%
AACATTGGTGAAACTGGTAA+AGG + chr5.1:65076209-65076228 MS.gene29663:CDS 35.0%
ACAACGCGATAAAAAATCAC+TGG + chr5.1:65076439-65076458 MS.gene29663:CDS 35.0%
AGATGAAACATTGGTGAAAC+TGG + chr5.1:65076203-65076222 MS.gene29663:CDS 35.0%
ATGCAGTTCATGGAAACAAA+TGG + chr5.1:65076382-65076401 MS.gene29663:CDS 35.0%
GTGAAACTGGTAAAGGAAAA+CGG + chr5.1:65076216-65076235 MS.gene29663:CDS 35.0%
TCTTCTTCTTTCAGAAAACC+AGG - chr5.1:65076801-65076820 None:intergenic 35.0%
TGCAGTTCATGGAAACAAAT+GGG + chr5.1:65076383-65076402 MS.gene29663:CDS 35.0%
TTCATCACCACCATTTGAAT+TGG - chr5.1:65076145-65076164 None:intergenic 35.0%
! ACTTTCATTCACACGTTTTC+CGG - chr5.1:65076595-65076614 None:intergenic 35.0%
! TCAAATGGTGGTGATGAAAA+TGG + chr5.1:65076147-65076166 MS.gene29663:CDS 35.0%
! TCAACACTTTCCTTTTACAC+CGG + chr5.1:65076332-65076351 MS.gene29663:CDS 35.0%
!! ATAAAGGTGTTAACGTGGTT+AGG + chr5.1:65076754-65076773 MS.gene29663:CDS 35.0%
!! CACTTTCTAAGTGTTGAATC+AGG - chr5.1:65076990-65077009 None:intergenic 35.0%
ATTGAAGCACATGCAGTTCA+TGG + chr5.1:65076372-65076391 MS.gene29663:CDS 40.0%
CGTGTGAATGAAAGTTACGA+CGG + chr5.1:65076600-65076619 MS.gene29663:CDS 40.0%
GTGATAAAGTGAAGGGTTCA+TGG + chr5.1:65076169-65076188 MS.gene29663:CDS 40.0%
TCTTCTTTCAGAAAACCAGG+TGG - chr5.1:65076798-65076817 None:intergenic 40.0%
! AACTGGTCTGTGATAAGCAA+CGG + chr5.1:65076246-65076265 MS.gene29663:CDS 40.0%
! TCGTTAAGTTTGTTTCCACC+TGG + chr5.1:65076780-65076799 MS.gene29663:CDS 40.0%
!! AAAGGAAAGTGTTGAACGGT+TGG - chr5.1:65076327-65076346 None:intergenic 40.0%
!! AGGGAATAAAGGTGTTAACG+TGG + chr5.1:65076749-65076768 MS.gene29663:CDS 40.0%
!! TATGTTGATAACATGCGCCT+TGG + chr5.1:65076951-65076970 MS.gene29663:CDS 40.0%
ACGATTTCTCGTCTTCTTCC+AGG + chr5.1:65076408-65076427 MS.gene29663:CDS 45.0%
AGGAAAACGGTGCAAGAAAC+TGG + chr5.1:65076229-65076248 MS.gene29663:CDS 45.0%
CTTTGAACAACCGTTGCAAC+CGG - chr5.1:65076531-65076550 None:intergenic 45.0%
GCATGATAGCAGAGGAAGTT+AGG + chr5.1:65076925-65076944 MS.gene29663:CDS 45.0%
GGTTGCAACGGTTGTTCAAA+GGG + chr5.1:65076530-65076549 MS.gene29663:CDS 45.0%
GGTTGTTCAAAGGGTTCCAA+CGG + chr5.1:65076539-65076558 MS.gene29663:CDS 45.0%
TGACGGTGAAGAAACGGTAA+CGG + chr5.1:65076713-65076732 MS.gene29663:CDS 45.0%
! ACACTTTCCTTTTACACCGG+CGG + chr5.1:65076335-65076354 MS.gene29663:CDS 45.0%
! ACGTTTTCCGGTTATCACAC+CGG - chr5.1:65076583-65076602 None:intergenic 45.0%
! ATGATGATGTTATCCTCCGC+CGG - chr5.1:65076354-65076373 None:intergenic 45.0%
! GATGATGACGCAGGGAATAA+AGG + chr5.1:65076738-65076757 MS.gene29663:CDS 45.0%
! TAACGGAAGATGATGACGCA+GGG + chr5.1:65076730-65076749 MS.gene29663:CDS 45.0%
!! AGAATAATAGCGGGTCACGT+GGG + chr5.1:65076685-65076704 MS.gene29663:CDS 45.0%
ATCGCGTTGTCTGTTCTACC+TGG - chr5.1:65076429-65076448 None:intergenic 50.0%
ATTCCCACCGGTGTGATAAC+CGG + chr5.1:65076573-65076592 MS.gene29663:CDS 50.0%
CGGTTGCAACGGTTGTTCAA+AGG + chr5.1:65076529-65076548 MS.gene29663:CDS 50.0%
GTCACGTGACGGTGAAGAAA+CGG + chr5.1:65076707-65076726 MS.gene29663:CDS 50.0%
GTGATAAGCAACGGAATCCC+CGG + chr5.1:65076255-65076274 MS.gene29663:CDS 50.0%
TCTTCAGCGCATGATAGCAG+AGG + chr5.1:65076917-65076936 MS.gene29663:CDS 50.0%
TGTTCAAAGGGTTCCAACGG+CGG + chr5.1:65076542-65076561 MS.gene29663:CDS 50.0%
TTATCCTCCGCCGGTGTAAA+AGG - chr5.1:65076345-65076364 None:intergenic 50.0%
TTTCCGGTTATCACACCGGT+GGG - chr5.1:65076579-65076598 None:intergenic 50.0%
! AGCGGTTTCACCGGTTACAA+CGG + chr5.1:65076500-65076519 MS.gene29663:CDS 50.0%
! ATAACATGCGCCTTGGTGGT+GGG + chr5.1:65076958-65076977 MS.gene29663:CDS 50.0%
! GTAACGGAAGATGATGACGC+AGG + chr5.1:65076729-65076748 MS.gene29663:CDS 50.0%
! TTTTCCGGTTATCACACCGG+TGG - chr5.1:65076580-65076599 None:intergenic 50.0%
!! GAGAATAATAGCGGGTCACG+TGG + chr5.1:65076684-65076703 MS.gene29663:CDS 50.0%
!! GTTGATAACATGCGCCTTGG+TGG + chr5.1:65076954-65076973 MS.gene29663:CDS 50.0%
AAGACTTCCCAGAACGACCG+GGG - chr5.1:65076275-65076294 None:intergenic 55.0%
ACCGGTGGAACCGTTGTAAC+CGG - chr5.1:65076513-65076532 None:intergenic 55.0%
ACCGGTTACAACGGTTCCAC+CGG + chr5.1:65076509-65076528 MS.gene29663:CDS 55.0%
ATCACACCGGTGGGAATCAC+CGG - chr5.1:65076570-65076589 None:intergenic 55.0%
CAAGACTTCCCAGAACGACC+GGG - chr5.1:65076276-65076295 None:intergenic 55.0%
GATAACATGCGCCTTGGTGG+TGG + chr5.1:65076957-65076976 MS.gene29663:CDS 55.0%
GCAAGACTTCCCAGAACGAC+CGG - chr5.1:65076277-65076296 None:intergenic 55.0%
GCTGATTACACCACCGCAGA+CGG - chr5.1:65076299-65076318 None:intergenic 55.0%
TGAACAACCGTTGCAACCGG+TGG - chr5.1:65076528-65076547 None:intergenic 55.0%
! AACGGTTCCACCGGTTGCAA+CGG + chr5.1:65076518-65076537 MS.gene29663:CDS 55.0%
! CTTTCCTTTTACACCGGCGG+AGG + chr5.1:65076338-65076357 MS.gene29663:CDS 55.0%
AACGGAATCCCCGGTCGTTC+TGG + chr5.1:65076264-65076283 MS.gene29663:CDS 60.0%
ACGGAATCCCCGGTCGTTCT+GGG + chr5.1:65076265-65076284 MS.gene29663:CDS 60.0%
CAGGAGCAAACCCACCACCA+AGG - chr5.1:65076971-65076990 None:intergenic 60.0%
CTGGGAAGTCTTGCCGTCTG+CGG + chr5.1:65076283-65076302 MS.gene29663:CDS 60.0%
GGCTCTTGCAGCGGTTTCAC+CGG + chr5.1:65076491-65076510 MS.gene29663:CDS 60.0%
AACTCTCCGCCGTCGTCGCA+CGG + chr5.1:65076467-65076486 MS.gene29663:CDS 65.0%
AAGGGTTCCAACGGCGGTGC+CGG + chr5.1:65076548-65076567 MS.gene29663:CDS 65.0%
GGAAGTCTTGCCGTCTGCGG+TGG + chr5.1:65076286-65076305 MS.gene29663:CDS 65.0%
GGGTCACGTGGGTCACGTGA+CGG + chr5.1:65076696-65076715 MS.gene29663:CDS 65.0%
CAAGAGCCGCCGTGCGACGA+CGG - chr5.1:65076479-65076498 None:intergenic 70.0%
GGAATCACCGGCACCGCCGT+TGG - chr5.1:65076558-65076577 None:intergenic 70.0%
TCGCACGGCGGCTCTTGCAG+CGG + chr5.1:65076482-65076501 MS.gene29663:CDS 70.0%
!! GCGGTGCCGGTGATTCCCAC+CGG + chr5.1:65076561-65076580 MS.gene29663:CDS 70.0%
TCTCCGCCGTCGTCGCACGG+CGG + chr5.1:65076470-65076489 MS.gene29663:CDS 75.0%
! GAGCCGCCGTGCGACGACGG+CGG - chr5.1:65076476-65076495 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 65076126 65077010 65076126 ID=MS.gene29663
chr5.1 mRNA 65076126 65077010 65076126 ID=MS.gene29663.t1;Parent=MS.gene29663
chr5.1 exon 65076126 65077010 65076126 ID=MS.gene29663.t1.exon1;Parent=MS.gene29663.t1
chr5.1 CDS 65076126 65077010 65076126 ID=cds.MS.gene29663.t1;Parent=MS.gene29663.t1
Gene Sequence

>MS.gene29663

ATGATCAGTGAAAATTCCAATTCAAATGGTGGTGATGAAAATGGTGATAAAGTGAAGGGTTCATGGAGTAAAACTGAAGATGAAACATTGGTGAAACTGGTAAAGGAAAACGGTGCAAGAAACTGGTCTGTGATAAGCAACGGAATCCCCGGTCGTTCTGGGAAGTCTTGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACTTTCCTTTTACACCGGCGGAGGATAACATCATCATTGAAGCACATGCAGTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGTAGAACAGACAACGCGATAAAAAATCACTGGAATTCAACTCTCCGCCGTCGTCGCACGGCGGCTCTTGCAGCGGTTTCACCGGTTACAACGGTTCCACCGGTTGCAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGGTGATTCCCACCGGTGTGATAACCGGAAAACGTGTGAATGAAAGTTACGACGGTGATTATTATAAGGATTTGTTGAGTCTCGGCACACGTTATAAACGTCCTTGTGTTATGGTTGAGAATAATAGCGGGTCACGTGGGTCACGTGACGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAAGGTGTTAACGTGGTTAGGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAGAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGGTTCTTCAGCGCATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTGGTGGTGGGTTTGCTCCTGATTCAACACTTAGAAAGTGA
Protein sequence

>MS.gene29663.t1

MISENSNSNGGDENGDKVKGSWSKTEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHFPFTPAEDNIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAALAAVSPVTTVPPVATVVQRVPTAVPVIPTGVITGKRVNESYDGDYYKDLLSLGTRYKRPCVMVENNSGSRGSRDGEETVTEDDDAGNKGVNVVRTSLSLFPPGFLKEEEERKEKEREKEIEDFEDSNDDLKLLKNEKLRSVLQRMIAEEVRNYVDNMRLGGGFAPDSTLRK