Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30077.t1 | XP_013448135.1 | 87.8 | 172 | 21 | 0 | 1 | 172 | 1 | 172 | 2.30E-81 | 311.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30077.t1 | Q8L8Q3 | 85.0 | 113 | 17 | 0 | 5 | 117 | 33 | 145 | 2.5e-52 | 206.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30077.t1 | A0A072TXJ1 | 87.8 | 172 | 21 | 0 | 1 | 172 | 1 | 172 | 1.6e-81 | 311.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30077.t1 | TF | LOB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30077.t1 | MTR_7g033800 | 96.512 | 172 | 6 | 0 | 1 | 172 | 1 | 172 | 2.51e-126 | 352 |
MS.gene30077.t1 | MTR_6g005070 | 90.000 | 110 | 11 | 0 | 4 | 113 | 2 | 111 | 1.08e-70 | 210 |
MS.gene30077.t1 | MTR_3g077240 | 86.957 | 115 | 14 | 1 | 1 | 115 | 1 | 114 | 2.15e-70 | 211 |
MS.gene30077.t1 | MTR_6g005080 | 86.607 | 112 | 15 | 0 | 4 | 115 | 3 | 114 | 2.06e-69 | 207 |
MS.gene30077.t1 | MTR_4g105170 | 65.116 | 172 | 45 | 3 | 1 | 157 | 1 | 172 | 3.20e-69 | 208 |
MS.gene30077.t1 | MTR_8g040900 | 55.294 | 170 | 54 | 3 | 6 | 171 | 2 | 153 | 1.50e-51 | 164 |
MS.gene30077.t1 | MTR_5g017950 | 66.364 | 110 | 37 | 0 | 5 | 114 | 2 | 111 | 1.42e-49 | 162 |
MS.gene30077.t1 | MTR_5g083230 | 62.393 | 117 | 40 | 1 | 9 | 125 | 4 | 116 | 1.44e-49 | 157 |
MS.gene30077.t1 | MTR_3g073690 | 66.667 | 111 | 37 | 0 | 5 | 115 | 3 | 113 | 1.68e-48 | 156 |
MS.gene30077.t1 | MTR_5g083010 | 50.000 | 150 | 69 | 1 | 8 | 157 | 8 | 151 | 4.36e-47 | 151 |
MS.gene30077.t1 | MTR_4g083680 | 64.078 | 103 | 37 | 0 | 10 | 112 | 14 | 116 | 9.95e-47 | 150 |
MS.gene30077.t1 | MTR_3g452660 | 67.290 | 107 | 35 | 0 | 8 | 114 | 4 | 110 | 1.05e-46 | 154 |
MS.gene30077.t1 | MTR_2g068760 | 63.107 | 103 | 38 | 0 | 10 | 112 | 12 | 114 | 1.68e-46 | 149 |
MS.gene30077.t1 | MTR_3g071590 | 59.829 | 117 | 43 | 1 | 8 | 124 | 5 | 117 | 7.09e-46 | 148 |
MS.gene30077.t1 | MTR_3g031660 | 60.577 | 104 | 41 | 0 | 9 | 112 | 5 | 108 | 1.16e-44 | 145 |
MS.gene30077.t1 | MTR_3g071420 | 67.010 | 97 | 32 | 0 | 8 | 104 | 11 | 107 | 1.37e-44 | 145 |
MS.gene30077.t1 | MTR_5g083960 | 59.821 | 112 | 45 | 0 | 3 | 114 | 31 | 142 | 6.23e-44 | 144 |
MS.gene30077.t1 | MTR_3g094690 | 61.905 | 105 | 40 | 0 | 10 | 114 | 46 | 150 | 8.48e-44 | 145 |
MS.gene30077.t1 | MTR_2g093310 | 59.223 | 103 | 42 | 0 | 10 | 112 | 32 | 134 | 2.85e-41 | 137 |
MS.gene30077.t1 | MTR_3g094690 | 60.952 | 105 | 40 | 1 | 10 | 114 | 46 | 149 | 3.24e-41 | 138 |
MS.gene30077.t1 | MTR_7g096530 | 60.000 | 115 | 42 | 2 | 1 | 111 | 1 | 115 | 1.06e-40 | 137 |
MS.gene30077.t1 | MTR_4g060950 | 54.464 | 112 | 50 | 1 | 2 | 112 | 15 | 126 | 4.64e-40 | 134 |
MS.gene30077.t1 | MTR_8g036085 | 59.048 | 105 | 42 | 1 | 11 | 114 | 23 | 127 | 5.15e-39 | 132 |
MS.gene30077.t1 | MTR_5g075020 | 63.810 | 105 | 38 | 0 | 10 | 114 | 42 | 146 | 6.26e-39 | 132 |
MS.gene30077.t1 | MTR_5g075020 | 63.810 | 105 | 38 | 0 | 10 | 114 | 46 | 150 | 9.61e-39 | 132 |
MS.gene30077.t1 | MTR_1g070220 | 57.265 | 117 | 45 | 2 | 1 | 112 | 1 | 117 | 2.24e-38 | 130 |
MS.gene30077.t1 | MTR_1g095850 | 57.426 | 101 | 43 | 0 | 12 | 112 | 73 | 173 | 5.70e-38 | 130 |
MS.gene30077.t1 | MTR_8g036105 | 59.804 | 102 | 40 | 1 | 11 | 111 | 18 | 119 | 6.20e-36 | 124 |
MS.gene30077.t1 | MTR_7g074990 | 61.053 | 95 | 36 | 1 | 11 | 104 | 20 | 114 | 1.50e-35 | 124 |
MS.gene30077.t1 | MTR_7g028905 | 50.980 | 102 | 50 | 0 | 10 | 111 | 4 | 105 | 1.64e-34 | 117 |
MS.gene30077.t1 | MTR_5g080470 | 55.670 | 97 | 42 | 1 | 10 | 105 | 6 | 102 | 6.73e-34 | 118 |
MS.gene30077.t1 | MTR_6g027710 | 51.923 | 104 | 49 | 1 | 10 | 112 | 39 | 142 | 3.89e-33 | 117 |
MS.gene30077.t1 | MTR_8g079660 | 50.000 | 104 | 52 | 0 | 11 | 114 | 8 | 111 | 4.09e-33 | 118 |
MS.gene30077.t1 | MTR_7g096610 | 57.143 | 98 | 41 | 1 | 8 | 104 | 5 | 102 | 5.67e-33 | 117 |
MS.gene30077.t1 | MTR_7g075230 | 53.043 | 115 | 51 | 2 | 11 | 122 | 12 | 126 | 1.76e-32 | 115 |
MS.gene30077.t1 | MTR_1g070205 | 54.737 | 95 | 42 | 1 | 11 | 104 | 12 | 106 | 3.12e-32 | 115 |
MS.gene30077.t1 | MTR_5g093010 | 46.552 | 116 | 58 | 1 | 12 | 127 | 6 | 117 | 3.54e-32 | 112 |
MS.gene30077.t1 | MTR_4g107450 | 37.580 | 157 | 86 | 4 | 12 | 161 | 11 | 162 | 2.39e-30 | 112 |
MS.gene30077.t1 | MTR_8g079620 | 46.154 | 104 | 56 | 0 | 11 | 114 | 8 | 111 | 2.56e-29 | 108 |
MS.gene30077.t1 | MTR_6g011200 | 44.898 | 98 | 53 | 1 | 9 | 105 | 7 | 104 | 3.23e-28 | 105 |
MS.gene30077.t1 | MTR_6g027700 | 48.515 | 101 | 51 | 1 | 11 | 110 | 7 | 107 | 3.41e-28 | 104 |
MS.gene30077.t1 | MTR_8g079580 | 46.667 | 105 | 55 | 1 | 11 | 114 | 8 | 112 | 8.98e-27 | 101 |
MS.gene30077.t1 | MTR_6g011230 | 43.000 | 100 | 57 | 0 | 8 | 107 | 8 | 107 | 1.20e-26 | 100 |
MS.gene30077.t1 | MTR_6g011250 | 44.762 | 105 | 57 | 1 | 8 | 111 | 6 | 110 | 4.32e-26 | 98.6 |
MS.gene30077.t1 | MTR_8g017090 | 41.346 | 104 | 61 | 0 | 8 | 111 | 9 | 112 | 8.33e-26 | 100 |
MS.gene30077.t1 | MTR_2g100020 | 42.708 | 96 | 55 | 0 | 12 | 107 | 20 | 115 | 3.95e-23 | 92.8 |
MS.gene30077.t1 | MTR_4g099230 | 38.462 | 104 | 62 | 2 | 12 | 114 | 3 | 105 | 1.56e-22 | 88.6 |
MS.gene30077.t1 | MTR_5g085390 | 39.423 | 104 | 62 | 1 | 9 | 111 | 7 | 110 | 4.53e-20 | 84.0 |
MS.gene30077.t1 | MTR_4g088035 | 35.556 | 90 | 58 | 0 | 10 | 99 | 5 | 94 | 4.11e-18 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30077.t1 | AT3G27650 | 84.956 | 113 | 17 | 0 | 5 | 117 | 33 | 145 | 4.65e-70 | 209 |
MS.gene30077.t1 | AT5G63090 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 1.73e-68 | 206 |
MS.gene30077.t1 | AT5G63090 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 1.73e-68 | 206 |
MS.gene30077.t1 | AT5G63090 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 1.73e-68 | 206 |
MS.gene30077.t1 | AT5G63090 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 1.73e-68 | 206 |
MS.gene30077.t1 | AT1G65620 | 69.828 | 116 | 33 | 1 | 1 | 116 | 1 | 114 | 3.70e-51 | 162 |
MS.gene30077.t1 | AT1G65620 | 69.828 | 116 | 33 | 1 | 1 | 116 | 1 | 114 | 3.70e-51 | 162 |
MS.gene30077.t1 | AT1G65620 | 69.828 | 116 | 33 | 1 | 1 | 116 | 1 | 114 | 3.70e-51 | 162 |
MS.gene30077.t1 | AT1G65620 | 69.828 | 116 | 33 | 1 | 1 | 116 | 1 | 114 | 3.70e-51 | 162 |
MS.gene30077.t1 | AT1G65620 | 69.828 | 116 | 33 | 1 | 1 | 116 | 1 | 114 | 3.70e-51 | 162 |
MS.gene30077.t1 | AT5G66870 | 65.455 | 110 | 38 | 0 | 6 | 115 | 2 | 111 | 1.82e-49 | 162 |
MS.gene30077.t1 | AT2G30130 | 62.281 | 114 | 39 | 1 | 9 | 122 | 6 | 115 | 5.90e-48 | 154 |
MS.gene30077.t1 | AT2G23660 | 60.748 | 107 | 42 | 0 | 8 | 114 | 2 | 108 | 1.11e-45 | 152 |
MS.gene30077.t1 | AT2G23660 | 60.748 | 107 | 42 | 0 | 8 | 114 | 2 | 108 | 1.11e-45 | 152 |
MS.gene30077.t1 | AT2G23660 | 60.748 | 107 | 42 | 0 | 8 | 114 | 2 | 108 | 1.11e-45 | 152 |
MS.gene30077.t1 | AT1G31320 | 59.322 | 118 | 46 | 1 | 10 | 125 | 12 | 129 | 2.76e-44 | 144 |
MS.gene30077.t1 | AT1G16530 | 61.607 | 112 | 42 | 1 | 10 | 120 | 13 | 124 | 6.81e-44 | 143 |
MS.gene30077.t1 | AT2G30340 | 55.932 | 118 | 47 | 1 | 10 | 122 | 51 | 168 | 6.92e-43 | 144 |
MS.gene30077.t1 | AT2G30340 | 55.932 | 118 | 47 | 1 | 10 | 122 | 52 | 169 | 7.10e-43 | 144 |
MS.gene30077.t1 | AT3G11090 | 59.259 | 108 | 44 | 0 | 8 | 115 | 8 | 115 | 1.76e-42 | 139 |
MS.gene30077.t1 | AT1G07900 | 59.223 | 103 | 42 | 0 | 10 | 112 | 32 | 134 | 2.09e-41 | 137 |
MS.gene30077.t1 | AT2G28500 | 59.223 | 103 | 42 | 0 | 10 | 112 | 54 | 156 | 5.89e-41 | 138 |
MS.gene30077.t1 | AT3G26660 | 51.304 | 115 | 55 | 1 | 12 | 125 | 6 | 120 | 2.38e-39 | 130 |
MS.gene30077.t1 | AT2G40470 | 61.905 | 105 | 40 | 0 | 10 | 114 | 19 | 123 | 2.56e-39 | 132 |
MS.gene30077.t1 | AT3G26620 | 56.000 | 100 | 44 | 0 | 12 | 111 | 6 | 105 | 5.00e-39 | 129 |
MS.gene30077.t1 | AT2G40470 | 61.905 | 105 | 40 | 0 | 10 | 114 | 44 | 148 | 5.77e-39 | 132 |
MS.gene30077.t1 | AT2G42430 | 55.372 | 121 | 49 | 2 | 1 | 116 | 1 | 121 | 4.57e-38 | 130 |
MS.gene30077.t1 | AT3G03760 | 57.692 | 104 | 43 | 1 | 10 | 112 | 50 | 153 | 1.33e-37 | 130 |
MS.gene30077.t1 | AT4G00210 | 55.357 | 112 | 49 | 1 | 1 | 111 | 1 | 112 | 1.68e-36 | 126 |
MS.gene30077.t1 | AT2G45420 | 60.606 | 99 | 38 | 1 | 14 | 111 | 40 | 138 | 2.96e-36 | 126 |
MS.gene30077.t1 | AT4G00220 | 60.606 | 99 | 38 | 1 | 14 | 111 | 20 | 118 | 5.75e-36 | 125 |
MS.gene30077.t1 | AT2G45410 | 44.937 | 158 | 79 | 4 | 14 | 170 | 19 | 169 | 1.48e-33 | 117 |
MS.gene30077.t1 | AT5G06080 | 50.467 | 107 | 52 | 1 | 10 | 115 | 6 | 112 | 2.48e-33 | 116 |
MS.gene30077.t1 | AT3G58190 | 55.660 | 106 | 46 | 1 | 1 | 105 | 1 | 106 | 4.40e-33 | 117 |
MS.gene30077.t1 | AT2G31310 | 55.208 | 96 | 42 | 1 | 10 | 104 | 6 | 101 | 5.26e-33 | 116 |
MS.gene30077.t1 | AT2G42440 | 52.525 | 99 | 46 | 1 | 8 | 105 | 4 | 102 | 1.32e-32 | 117 |
MS.gene30077.t1 | AT3G50510 | 48.113 | 106 | 55 | 0 | 9 | 114 | 10 | 115 | 2.68e-31 | 112 |
MS.gene30077.t1 | AT3G50510 | 48.113 | 106 | 55 | 0 | 9 | 114 | 10 | 115 | 2.68e-31 | 112 |
MS.gene30077.t1 | AT5G35900 | 41.964 | 112 | 65 | 0 | 12 | 123 | 6 | 117 | 3.22e-28 | 104 |
MS.gene30077.t1 | AT3G13850 | 36.220 | 127 | 81 | 0 | 12 | 138 | 37 | 163 | 1.93e-27 | 103 |
MS.gene30077.t1 | AT3G47870 | 37.615 | 109 | 68 | 0 | 8 | 116 | 33 | 141 | 1.79e-25 | 100 |
MS.gene30077.t1 | AT1G72980 | 40.541 | 111 | 66 | 0 | 1 | 111 | 3 | 113 | 5.56e-24 | 94.0 |
MS.gene30077.t1 | AT1G06280 | 43.011 | 93 | 52 | 1 | 12 | 104 | 25 | 116 | 7.06e-20 | 82.8 |
MS.gene30077.t1 | AT4G22700 | 37.838 | 111 | 67 | 2 | 12 | 121 | 6 | 115 | 2.88e-19 | 80.9 |
MS.gene30077.t1 | AT2G19820 | 37.363 | 91 | 56 | 1 | 8 | 97 | 9 | 99 | 8.46e-16 | 70.1 |
MS.gene30077.t1 | AT5G15060 | 41.096 | 73 | 41 | 1 | 12 | 82 | 18 | 90 | 9.17e-16 | 70.5 |
MS.gene30077.t1 | AT3G27940 | 35.821 | 67 | 43 | 0 | 10 | 76 | 4 | 70 | 4.21e-11 | 58.5 |
MS.gene30077.t1 | AT3G27940 | 35.821 | 67 | 43 | 0 | 10 | 76 | 4 | 70 | 4.21e-11 | 58.5 |
MS.gene30077.t1 | AT3G27940 | 35.821 | 67 | 43 | 0 | 10 | 76 | 4 | 70 | 4.21e-11 | 58.5 |
Find 40 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAATGTTCACAAAATATT+TGG | 0.149406 | 7.1:-63714706 | MS.gene30077:CDS |
GCAAATTTCTGTGGCTCTTC+TGG | 0.194109 | 7.1:+63714727 | None:intergenic |
AGGATTAAAGATCCAGTTTA+TGG | 0.225345 | 7.1:-63714595 | MS.gene30077:CDS |
GGCTCTTCTGGTGGGAAATA+TGG | 0.297872 | 7.1:+63714739 | None:intergenic |
AATCCTTGCCTCGGCTTCAT+AGG | 0.305194 | 7.1:+63714612 | None:intergenic |
TAGTAGAATCAAGTTCCTTT+TGG | 0.319682 | 7.1:+63714527 | None:intergenic |
GGAGCCTAAGAACTTGTCTT+TGG | 0.328487 | 7.1:+63714548 | None:intergenic |
ATCATGATATCGCAGCTATA+AGG | 0.383935 | 7.1:-63714462 | MS.gene30077:CDS |
GCACCAACACAACCATAAAC+TGG | 0.396732 | 7.1:+63714583 | None:intergenic |
GATGGAAGCGGTTCTTCTCT+TGG | 0.408243 | 7.1:-63714427 | MS.gene30077:CDS |
TCCTCCAAAGACAAGTTCTT+AGG | 0.431787 | 7.1:-63714552 | MS.gene30077:CDS |
TTGTCTTTGGAGGACTGAAA+TGG | 0.450349 | 7.1:+63714561 | None:intergenic |
TATGGAGCAAATATGCAATC+TGG | 0.454516 | 7.1:+63714757 | None:intergenic |
AATTTCTGTGGCTCTTCTGG+TGG | 0.462397 | 7.1:+63714730 | None:intergenic |
TCTTGGTCAATCTCCTCCTC+CGG | 0.481615 | 7.1:-63714410 | MS.gene30077:CDS |
ATAAGGATCGGTGGTGAAGA+TGG | 0.485997 | 7.1:-63714445 | MS.gene30077:CDS |
GCCTAAGAACTTGTCTTTGG+AGG | 0.492984 | 7.1:+63714551 | None:intergenic |
TGGATCTTTAATCCTTGCCT+CGG | 0.516855 | 7.1:+63714603 | None:intergenic |
ACAAGTTCTTAGGCTCCAAA+AGG | 0.517159 | 7.1:-63714542 | MS.gene30077:CDS |
TGAAGTGCAACCACATCAAA+GGG | 0.518270 | 7.1:-63714656 | MS.gene30077:CDS |
TCATTATTGTTCCAAGGAGA+AGG | 0.524865 | 7.1:+63714376 | None:intergenic |
ATAGCTGCGATATCATGATT+CGG | 0.525283 | 7.1:+63714466 | None:intergenic |
ACTGCATCTTCCCTTTGATG+TGG | 0.539992 | 7.1:+63714646 | None:intergenic |
ATGAAGTGCAACCACATCAA+AGG | 0.542513 | 7.1:-63714657 | MS.gene30077:CDS |
GATCCAGTTTATGGTTGTGT+TGG | 0.554848 | 7.1:-63714586 | MS.gene30077:CDS |
ATTTCTGTGGCTCTTCTGGT+GGG | 0.562695 | 7.1:+63714731 | None:intergenic |
AGTGGATCATTATTGTTCCA+AGG | 0.566470 | 7.1:+63714370 | None:intergenic |
CTCTCTTGCCTATGAAGCCG+AGG | 0.568060 | 7.1:-63714620 | MS.gene30077:CDS |
GATGGTTATCACACAGGAGG+AGG | 0.572079 | 7.1:-63714343 | MS.gene30077:CDS |
AATAATGATCCACTTGGTGA+TGG | 0.581399 | 7.1:-63714361 | MS.gene30077:CDS |
TGAACATTTGCAAATTTCTG+TGG | 0.582165 | 7.1:+63714718 | None:intergenic |
TTGCCTATGAAGCCGAGGCA+AGG | 0.591021 | 7.1:-63714615 | MS.gene30077:CDS |
ATCGGTGGTGAAGATGGAAG+CGG | 0.616830 | 7.1:-63714439 | MS.gene30077:CDS |
AGCACATGGTGAATTTGAGT+AGG | 0.632061 | 7.1:+63714810 | None:intergenic |
GATATCGCAGCTATAAGGAT+CGG | 0.642191 | 7.1:-63714457 | MS.gene30077:CDS |
TGGAACAATAATGATCCACT+TGG | 0.642355 | 7.1:-63714367 | MS.gene30077:CDS |
CTTGGTGATGGTTATCACAC+AGG | 0.642976 | 7.1:-63714349 | MS.gene30077:CDS |
ATCGCAGCTATAAGGATCGG+TGG | 0.650659 | 7.1:-63714454 | MS.gene30077:CDS |
GTGTGATAACCATCACCAAG+TGG | 0.670592 | 7.1:+63714352 | None:intergenic |
GGTGATGGTTATCACACAGG+AGG | 0.698306 | 7.1:-63714346 | MS.gene30077:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | GCAAATGTTCACAAAATATT+TGG | - | chr7.1:63714450-63714469 | MS.gene30077:CDS | 25.0% |
AGGATTAAAGATCCAGTTTA+TGG | - | chr7.1:63714561-63714580 | MS.gene30077:CDS | 30.0% | |
TGAACATTTGCAAATTTCTG+TGG | + | chr7.1:63714441-63714460 | None:intergenic | 30.0% | |
! | TAGTAGAATCAAGTTCCTTT+TGG | + | chr7.1:63714632-63714651 | None:intergenic | 30.0% |
AGTGGATCATTATTGTTCCA+AGG | + | chr7.1:63714789-63714808 | None:intergenic | 35.0% | |
ATAGCTGCGATATCATGATT+CGG | + | chr7.1:63714693-63714712 | None:intergenic | 35.0% | |
ATCATGATATCGCAGCTATA+AGG | - | chr7.1:63714694-63714713 | MS.gene30077:CDS | 35.0% | |
TATGGAGCAAATATGCAATC+TGG | + | chr7.1:63714402-63714421 | None:intergenic | 35.0% | |
TCATTATTGTTCCAAGGAGA+AGG | + | chr7.1:63714783-63714802 | None:intergenic | 35.0% | |
TGGAACAATAATGATCCACT+TGG | - | chr7.1:63714789-63714808 | MS.gene30077:CDS | 35.0% | |
! | AATAATGATCCACTTGGTGA+TGG | - | chr7.1:63714795-63714814 | MS.gene30077:CDS | 35.0% |
! | CTTTTTACTATCCTTCTCCT+TGG | - | chr7.1:63714769-63714788 | MS.gene30077:CDS | 35.0% |
ACAAGTTCTTAGGCTCCAAA+AGG | - | chr7.1:63714614-63714633 | MS.gene30077:CDS | 40.0% | |
AGCACATGGTGAATTTGAGT+AGG | + | chr7.1:63714349-63714368 | None:intergenic | 40.0% | |
ATGAAGTGCAACCACATCAA+AGG | - | chr7.1:63714499-63714518 | MS.gene30077:CDS | 40.0% | |
GATATCGCAGCTATAAGGAT+CGG | - | chr7.1:63714699-63714718 | MS.gene30077:CDS | 40.0% | |
GATCCAGTTTATGGTTGTGT+TGG | - | chr7.1:63714570-63714589 | MS.gene30077:CDS | 40.0% | |
GGAGAAGGATAGTAAAAAGC+CGG | + | chr7.1:63714768-63714787 | None:intergenic | 40.0% | |
TCCTCCAAAGACAAGTTCTT+AGG | - | chr7.1:63714604-63714623 | MS.gene30077:CDS | 40.0% | |
TGAAGTGCAACCACATCAAA+GGG | - | chr7.1:63714500-63714519 | MS.gene30077:CDS | 40.0% | |
TGGATCTTTAATCCTTGCCT+CGG | + | chr7.1:63714556-63714575 | None:intergenic | 40.0% | |
! | TTGTCTTTGGAGGACTGAAA+TGG | + | chr7.1:63714598-63714617 | None:intergenic | 40.0% |
AAAAACTTGCACGCAGCACA+TGG | + | chr7.1:63714363-63714382 | None:intergenic | 45.0% | |
AATTTCTGTGGCTCTTCTGG+TGG | + | chr7.1:63714429-63714448 | None:intergenic | 45.0% | |
ACTGCATCTTCCCTTTGATG+TGG | + | chr7.1:63714513-63714532 | None:intergenic | 45.0% | |
ATAAGGATCGGTGGTGAAGA+TGG | - | chr7.1:63714711-63714730 | MS.gene30077:CDS | 45.0% | |
ATTTCTGTGGCTCTTCTGGT+GGG | + | chr7.1:63714428-63714447 | None:intergenic | 45.0% | |
GAAGGATAGTAAAAAGCCGG+AGG | + | chr7.1:63714765-63714784 | None:intergenic | 45.0% | |
GCAAATTTCTGTGGCTCTTC+TGG | + | chr7.1:63714432-63714451 | None:intergenic | 45.0% | |
GCACCAACACAACCATAAAC+TGG | + | chr7.1:63714576-63714595 | None:intergenic | 45.0% | |
GCCTAAGAACTTGTCTTTGG+AGG | + | chr7.1:63714608-63714627 | None:intergenic | 45.0% | |
GGAGCCTAAGAACTTGTCTT+TGG | + | chr7.1:63714611-63714630 | None:intergenic | 45.0% | |
GTGTGATAACCATCACCAAG+TGG | + | chr7.1:63714807-63714826 | None:intergenic | 45.0% | |
!! | CTGCGTGCAAGTTTTTGAGA+AGG | - | chr7.1:63714367-63714386 | MS.gene30077:CDS | 45.0% |
!! | CTTGGTGATGGTTATCACAC+AGG | - | chr7.1:63714807-63714826 | MS.gene30077:CDS | 45.0% |
AATCCTTGCCTCGGCTTCAT+AGG | + | chr7.1:63714547-63714566 | None:intergenic | 50.0% | |
ATCGCAGCTATAAGGATCGG+TGG | - | chr7.1:63714702-63714721 | MS.gene30077:CDS | 50.0% | |
ATCGGTGGTGAAGATGGAAG+CGG | - | chr7.1:63714717-63714736 | MS.gene30077:CDS | 50.0% | |
GATGGAAGCGGTTCTTCTCT+TGG | - | chr7.1:63714729-63714748 | MS.gene30077:CDS | 50.0% | |
GATGGTTATCACACAGGAGG+AGG | - | chr7.1:63714813-63714832 | MS.gene30077:CDS | 50.0% | |
GGATAGTAAAAAGCCGGAGG+AGG | + | chr7.1:63714762-63714781 | None:intergenic | 50.0% | |
GGCTCTTCTGGTGGGAAATA+TGG | + | chr7.1:63714420-63714439 | None:intergenic | 50.0% | |
TCTTGGTCAATCTCCTCCTC+CGG | - | chr7.1:63714746-63714765 | MS.gene30077:CDS | 50.0% | |
! | GGTGATGGTTATCACACAGG+AGG | - | chr7.1:63714810-63714829 | MS.gene30077:CDS | 50.0% |
CTCTCTTGCCTATGAAGCCG+AGG | - | chr7.1:63714536-63714555 | MS.gene30077:CDS | 55.0% | |
TTGCCTATGAAGCCGAGGCA+AGG | - | chr7.1:63714541-63714560 | MS.gene30077:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 63714330 | 63714848 | 63714330 | ID=MS.gene30077 |
chr7.1 | mRNA | 63714330 | 63714848 | 63714330 | ID=MS.gene30077.t1;Parent=MS.gene30077 |
chr7.1 | exon | 63714330 | 63714848 | 63714330 | ID=MS.gene30077.t1.exon1;Parent=MS.gene30077.t1 |
chr7.1 | CDS | 63714330 | 63714848 | 63714330 | ID=cds.MS.gene30077.t1;Parent=MS.gene30077.t1 |
Gene Sequence |
Protein sequence |