Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30240.t1 | XP_013443315.1 | 97.8 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.00E+00 | 1695.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30240.t1 | Q84TH9 | 50.9 | 976 | 335 | 17 | 3 | 857 | 6 | 958 | 3.0e-252 | 872.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30240.t1 | A0A072TUX0 | 97.8 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.0e+00 | 1695.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30240.t1 | TF | RWP-RK |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30240.t1 | MTR_0022s0430 | 97.783 | 857 | 19 | 0 | 1 | 857 | 1 | 857 | 0.0 | 1750 |
MS.gene30240.t1 | MTR_0022s0430 | 98.248 | 742 | 13 | 0 | 116 | 857 | 1 | 742 | 0.0 | 1518 |
MS.gene30240.t1 | MTR_1g100970 | 69.111 | 709 | 184 | 9 | 1 | 692 | 1 | 691 | 0.0 | 961 |
MS.gene30240.t1 | MTR_1g100970 | 65.537 | 177 | 54 | 3 | 688 | 857 | 803 | 979 | 2.01e-59 | 219 |
MS.gene30240.t1 | MTR_1g100970 | 71.935 | 620 | 153 | 5 | 76 | 692 | 10 | 611 | 0.0 | 889 |
MS.gene30240.t1 | MTR_1g100970 | 65.537 | 177 | 54 | 3 | 688 | 857 | 723 | 899 | 1.08e-59 | 219 |
MS.gene30240.t1 | MTR_1g100970 | 70.192 | 416 | 105 | 4 | 280 | 692 | 4 | 403 | 0.0 | 576 |
MS.gene30240.t1 | MTR_1g100970 | 65.537 | 177 | 54 | 3 | 688 | 857 | 515 | 691 | 5.26e-61 | 220 |
MS.gene30240.t1 | MTR_3g115400 | 37.500 | 792 | 422 | 18 | 112 | 853 | 139 | 907 | 5.73e-145 | 451 |
MS.gene30240.t1 | MTR_2g099350 | 40.365 | 602 | 301 | 16 | 84 | 667 | 137 | 698 | 2.93e-119 | 385 |
MS.gene30240.t1 | MTR_2g099350 | 34.783 | 138 | 90 | 0 | 718 | 855 | 820 | 957 | 1.28e-19 | 95.1 |
MS.gene30240.t1 | MTR_4g068000 | 40.463 | 561 | 278 | 14 | 112 | 658 | 147 | 665 | 3.24e-114 | 370 |
MS.gene30240.t1 | MTR_4g068000 | 44.444 | 81 | 45 | 0 | 764 | 844 | 826 | 906 | 3.83e-18 | 90.1 |
MS.gene30240.t1 | MTR_5g099060 | 33.676 | 389 | 213 | 9 | 87 | 466 | 98 | 450 | 2.13e-49 | 189 |
MS.gene30240.t1 | MTR_5g099060 | 71.951 | 82 | 23 | 0 | 565 | 646 | 608 | 689 | 4.43e-30 | 128 |
MS.gene30240.t1 | MTR_5g099060 | 42.683 | 82 | 46 | 1 | 759 | 839 | 828 | 909 | 5.93e-13 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30240.t1 | AT4G24020 | 52.169 | 945 | 310 | 16 | 34 | 857 | 35 | 958 | 0.0 | 887 |
MS.gene30240.t1 | AT1G64530 | 53.129 | 879 | 316 | 19 | 28 | 857 | 5 | 836 | 0.0 | 863 |
MS.gene30240.t1 | AT1G64530 | 55.187 | 723 | 246 | 15 | 167 | 857 | 5 | 681 | 0.0 | 742 |
MS.gene30240.t1 | AT4G24020 | 51.073 | 699 | 234 | 12 | 246 | 857 | 1 | 678 | 0.0 | 630 |
MS.gene30240.t1 | AT1G76350 | 35.534 | 833 | 459 | 22 | 18 | 828 | 1 | 777 | 8.53e-148 | 456 |
MS.gene30240.t1 | AT1G76350 | 35.534 | 833 | 459 | 22 | 18 | 828 | 1 | 777 | 8.53e-148 | 456 |
MS.gene30240.t1 | AT1G76350 | 35.534 | 833 | 459 | 22 | 18 | 828 | 1 | 777 | 8.53e-148 | 456 |
MS.gene30240.t1 | AT1G76350 | 35.534 | 833 | 459 | 22 | 18 | 828 | 1 | 777 | 8.53e-148 | 456 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.615 | 832 | 439 | 21 | 90 | 856 | 137 | 928 | 1.96e-143 | 448 |
MS.gene30240.t1 | AT2G43500 | 34.201 | 845 | 438 | 22 | 90 | 856 | 137 | 941 | 4.53e-140 | 439 |
MS.gene30240.t1 | AT2G43500 | 34.201 | 845 | 438 | 22 | 90 | 856 | 137 | 941 | 4.53e-140 | 439 |
MS.gene30240.t1 | AT2G43500 | 33.964 | 845 | 440 | 22 | 90 | 856 | 137 | 941 | 5.41e-139 | 437 |
MS.gene30240.t1 | AT1G20640 | 35.006 | 817 | 468 | 18 | 53 | 842 | 45 | 825 | 3.21e-137 | 429 |
MS.gene30240.t1 | AT1G20640 | 35.006 | 817 | 468 | 18 | 53 | 842 | 45 | 825 | 3.21e-137 | 429 |
MS.gene30240.t1 | AT1G20640 | 35.006 | 817 | 468 | 18 | 53 | 842 | 45 | 825 | 3.21e-137 | 429 |
MS.gene30240.t1 | AT3G59580 | 39.451 | 583 | 304 | 13 | 112 | 686 | 106 | 647 | 2.33e-120 | 386 |
MS.gene30240.t1 | AT3G59580 | 43.750 | 96 | 52 | 2 | 763 | 856 | 793 | 888 | 4.74e-18 | 90.1 |
MS.gene30240.t1 | AT3G59580 | 39.451 | 583 | 304 | 13 | 112 | 686 | 106 | 647 | 2.33e-120 | 386 |
MS.gene30240.t1 | AT3G59580 | 43.750 | 96 | 52 | 2 | 763 | 856 | 793 | 888 | 4.74e-18 | 90.1 |
MS.gene30240.t1 | AT3G59580 | 39.451 | 583 | 304 | 13 | 112 | 686 | 106 | 647 | 2.33e-120 | 386 |
MS.gene30240.t1 | AT3G59580 | 43.750 | 96 | 52 | 2 | 763 | 856 | 793 | 888 | 4.74e-18 | 90.1 |
MS.gene30240.t1 | AT2G17150 | 37.197 | 578 | 308 | 11 | 112 | 650 | 124 | 685 | 3.59e-111 | 362 |
MS.gene30240.t1 | AT2G17150 | 37.197 | 578 | 308 | 11 | 112 | 650 | 124 | 685 | 3.59e-111 | 362 |
MS.gene30240.t1 | AT2G17150 | 33.846 | 520 | 292 | 10 | 112 | 595 | 124 | 627 | 1.66e-85 | 286 |
MS.gene30240.t1 | AT2G17150 | 33.843 | 523 | 291 | 11 | 112 | 595 | 124 | 630 | 8.98e-84 | 282 |
MS.gene30240.t1 | AT2G17150 | 33.843 | 523 | 291 | 11 | 112 | 595 | 124 | 630 | 8.98e-84 | 282 |
MS.gene30240.t1 | AT2G17150 | 34.459 | 444 | 237 | 10 | 245 | 650 | 3 | 430 | 6.21e-65 | 230 |
MS.gene30240.t1 | AT4G38340 | 35.398 | 339 | 189 | 5 | 103 | 437 | 37 | 349 | 5.54e-64 | 228 |
MS.gene30240.t1 | AT4G38340 | 64.634 | 82 | 29 | 0 | 565 | 646 | 419 | 500 | 9.23e-27 | 117 |
MS.gene30240.t1 | AT4G38340 | 35.398 | 339 | 189 | 5 | 103 | 437 | 108 | 420 | 2.74e-63 | 228 |
MS.gene30240.t1 | AT4G38340 | 64.634 | 82 | 29 | 0 | 565 | 646 | 490 | 571 | 1.21e-26 | 117 |
MS.gene30240.t1 | AT4G35270 | 43.617 | 94 | 51 | 2 | 765 | 856 | 865 | 958 | 7.58e-17 | 86.3 |
MS.gene30240.t1 | AT4G35270 | 43.617 | 94 | 51 | 2 | 765 | 856 | 865 | 958 | 7.58e-17 | 86.3 |
MS.gene30240.t1 | AT4G35270 | 43.617 | 94 | 51 | 2 | 765 | 856 | 865 | 958 | 7.58e-17 | 86.3 |
MS.gene30240.t1 | AT4G35270 | 43.617 | 94 | 51 | 2 | 765 | 856 | 865 | 958 | 7.58e-17 | 86.3 |
Find 162 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAGGAGTTCAGAAATTT+TGG | 0.134313 | 6.2:+45238393 | MS.gene30240:CDS |
GGCATTTGATATCAAGTATT+TGG | 0.155719 | 6.2:+45240922 | MS.gene30240:CDS |
GAATGCATTATCCGAGATTT+TGG | 0.190538 | 6.2:+45238998 | MS.gene30240:CDS |
GAAATTGTTGAAATAATAAA+TGG | 0.200770 | 6.2:+45239569 | MS.gene30240:CDS |
CCGCGGAACTTTGGCTTTGC+CGG | 0.236108 | 6.2:+45237751 | MS.gene30240:CDS |
TCCTTCAACAGATGTTATTT+TGG | 0.238876 | 6.2:+45240673 | MS.gene30240:CDS |
GAGATGATATCATAAGGTTT+AGG | 0.252384 | 6.2:+45240831 | MS.gene30240:CDS |
TTTGATGACATAAATGATAT+AGG | 0.255609 | 6.2:+45239725 | MS.gene30240:CDS |
CTTTGAAACTTCATGGCCTT+TGG | 0.283678 | 6.2:+45235749 | MS.gene30240:CDS |
TGAATGTTCTTGCTCAAGTT+TGG | 0.289107 | 6.2:+45237471 | MS.gene30240:CDS |
ATATTGACTTTGAAACTTCA+TGG | 0.295000 | 6.2:+45235742 | MS.gene30240:CDS |
TGATGATGCCTCGCCGGATA+TGG | 0.295685 | 6.2:+45239655 | MS.gene30240:CDS |
AGATGATATCATAAGGTTTA+GGG | 0.297192 | 6.2:+45240832 | MS.gene30240:CDS |
TGTGAACAAAAGGGTTTGTT+AGG | 0.298735 | 6.2:+45239464 | MS.gene30240:CDS |
ACAAAATTTCCAAAGTCTTA+AGG | 0.299670 | 6.2:+45239508 | MS.gene30240:CDS |
GTAAAGGTGGTAGAGCTATA+TGG | 0.302407 | 6.2:-45237373 | None:intergenic |
TTGATGACATAAATGATATA+GGG | 0.306217 | 6.2:+45239726 | MS.gene30240:CDS |
CTAGAATAATACTGAACATT+AGG | 0.308143 | 6.2:-45237686 | None:intergenic |
CGAAGTAGAAGGTTCATTAA+AGG | 0.317422 | 6.2:-45240495 | None:intergenic |
TTGCAGACTTTATCCACTTC+AGG | 0.317776 | 6.2:-45237848 | None:intergenic |
ATGCAGGCATAGAAGTGTTT+TGG | 0.319602 | 6.2:+45239079 | MS.gene30240:CDS |
AAAGTCCAAATAGGAGAAAA+AGG | 0.324979 | 6.2:-45235825 | None:intergenic |
GTGTCATTCTTTCCTTGATT+AGG | 0.326052 | 6.2:-45237415 | None:intergenic |
CAAAGTCTTAAGGTTGCTTC+TGG | 0.326490 | 6.2:+45239518 | MS.gene30240:CDS |
CGGTATAAACTCACGACTTC+AGG | 0.341493 | 6.2:+45237515 | MS.gene30240:CDS |
GAATGTTCTTGCTCAAGTTT+GGG | 0.347471 | 6.2:+45237472 | MS.gene30240:CDS |
TAAAGGTGGTAGAGCTATAT+GGG | 0.350011 | 6.2:-45237372 | None:intergenic |
GATGAATCCTTGAAGCTTCT+AGG | 0.354814 | 6.2:-45240706 | None:intergenic |
CACGGTGTTGAAGGAGCATT+TGG | 0.358152 | 6.2:+45240428 | MS.gene30240:CDS |
AATTTAGTAGATTGAATAAT+CGG | 0.359252 | 6.2:-45239620 | None:intergenic |
CAGATTCGCTTCATTGTAGT+TGG | 0.362535 | 6.2:-45240314 | None:intergenic |
GGAAGCTCGGTTGAGAGCTC+GGG | 0.369901 | 6.2:+45241067 | MS.gene30240:CDS |
GATCACAACATTGCAGCTTC+AGG | 0.377518 | 6.2:+45235858 | MS.gene30240:CDS |
TGAAACTCATAATTTACCTT+TGG | 0.388107 | 6.2:+45239040 | MS.gene30240:CDS |
GATGAAGATTGTGACTATAA+AGG | 0.392208 | 6.2:+45240799 | MS.gene30240:CDS |
TGGAAGCTCGGTTGAGAGCT+CGG | 0.395850 | 6.2:+45241066 | MS.gene30240:CDS |
GGGTTTGTTAGGATCAATAT+TGG | 0.397430 | 6.2:+45239475 | MS.gene30240:CDS |
TTAAAGGAACCAGCAGCAAT+AGG | 0.398705 | 6.2:-45240479 | None:intergenic |
TCAAACTTGTTCGAAGTAGA+AGG | 0.406104 | 6.2:-45240506 | None:intergenic |
TTATAATGTCCGCGGAACTT+TGG | 0.411117 | 6.2:+45237742 | MS.gene30240:CDS |
ATTCTAGTAAAGAGTATTCA+AGG | 0.417663 | 6.2:+45237702 | MS.gene30240:CDS |
GCCTTCTCGAAAGATCAAAA+AGG | 0.427695 | 6.2:+45240361 | MS.gene30240:CDS |
TATCAGGAAGCAACATTATC+CGG | 0.428263 | 6.2:+45241014 | MS.gene30240:CDS |
TGAACATTAGGAGTCCATTC+AGG | 0.428488 | 6.2:-45237674 | None:intergenic |
CCTTGCAGGCAGTAAATTTG+AGG | 0.428965 | 6.2:+45238377 | MS.gene30240:intron |
CTCAACCGAGCTTCCAAGAA+TGG | 0.432722 | 6.2:-45241059 | None:intergenic |
CAACAAGGTCAAGGAGTTGC+CGG | 0.440323 | 6.2:+45239248 | MS.gene30240:CDS |
AGCATGTGATGCAGATTTGC+AGG | 0.441692 | 6.2:+45240970 | MS.gene30240:CDS |
TCAGAACCTCAAGAACCATT+TGG | 0.443751 | 6.2:+45240599 | MS.gene30240:CDS |
CATTTGCATATGAACAAAAT+CGG | 0.447369 | 6.2:-45240738 | None:intergenic |
ATAGGGAGTGTGCTTGTACT+TGG | 0.448459 | 6.2:-45240461 | None:intergenic |
TTTGTCCATTCTTGGAAGCT+CGG | 0.456709 | 6.2:+45241054 | MS.gene30240:CDS |
TGTTGAAGGAGCATTTGGTT+TGG | 0.459032 | 6.2:+45240433 | MS.gene30240:CDS |
TGCTTCTGGCGTTGAACTTG+AGG | 0.461662 | 6.2:+45239532 | MS.gene30240:CDS |
TCCAAAATAACATCTGTTGA+AGG | 0.462313 | 6.2:-45240674 | None:intergenic |
CAGAAGCAACCTTAAGACTT+TGG | 0.464919 | 6.2:-45239517 | None:intergenic |
GAATCGGTCCACGGTGTTGA+AGG | 0.465822 | 6.2:+45240419 | MS.gene30240:CDS |
ATCAGGTCCTAGAAGCTTCA+AGG | 0.470331 | 6.2:+45240699 | MS.gene30240:CDS |
TCGATTAGCATTCCTCCAAA+TGG | 0.471421 | 6.2:-45240614 | None:intergenic |
TTCAATCACACATTTGAGCT+TGG | 0.474964 | 6.2:-45240399 | None:intergenic |
TTCTGTCGTGATTGATCTAG+TGG | 0.475848 | 6.2:-45239689 | None:intergenic |
CTATGTGCATCGAGAACAAA+TGG | 0.477972 | 6.2:-45237542 | None:intergenic |
GGCACTCCCTCCTCCATATC+CGG | 0.479812 | 6.2:-45239668 | None:intergenic |
ATGAGAGCATAGTGTACTAA+AGG | 0.480498 | 6.2:-45239338 | None:intergenic |
CACAAACATGGGTTCCATGC+AGG | 0.482327 | 6.2:+45239063 | MS.gene30240:CDS |
ATAGTGTACTAAAGGGTAAT+CGG | 0.483148 | 6.2:-45239330 | None:intergenic |
TCGTTCTTCTTAGGTTCTGA+TGG | 0.484619 | 6.2:-45240554 | None:intergenic |
TTCAGCAGAAGTTACCTGAA+TGG | 0.484930 | 6.2:+45237660 | MS.gene30240:CDS |
TCACAAAATTTATTGATACT+AGG | 0.487471 | 6.2:-45239446 | None:intergenic |
ATACCGACTTCCGTTCCTCA+CGG | 0.490903 | 6.2:-45237498 | None:intergenic |
TTGCCGGTGTTTGAACCTCC+AGG | 0.491680 | 6.2:+45237767 | MS.gene30240:CDS |
TGATGATCAAGAGTGGATAT+TGG | 0.499118 | 6.2:+45240946 | MS.gene30240:CDS |
TAAAGGAACCAGCAGCAATA+GGG | 0.499720 | 6.2:-45240478 | None:intergenic |
CATATAGAGATGATATCATA+AGG | 0.502450 | 6.2:+45240825 | MS.gene30240:CDS |
TAGTACATAATCATCACTTC+CGG | 0.503376 | 6.2:-45239408 | None:intergenic |
TTATTTCAGTGGGAGTCTAA+AGG | 0.508493 | 6.2:+45239877 | MS.gene30240:CDS |
ACAATCATGTGTTGCTGTGT+TGG | 0.509780 | 6.2:+45237790 | MS.gene30240:CDS |
TTGGTTTCAGTCTTCAAGGA+AGG | 0.509934 | 6.2:-45239788 | None:intergenic |
ATTTACCTTTGGCACAAACA+TGG | 0.510573 | 6.2:+45239051 | MS.gene30240:CDS |
GATCTTTCGAGAAGGCCAAC+GGG | 0.510978 | 6.2:-45240354 | None:intergenic |
AGAAAATGAACATACCTCCT+AGG | 0.514035 | 6.2:-45239913 | None:intergenic |
TTTGGAGCATCCATACAGTC+AGG | 0.519675 | 6.2:+45238411 | MS.gene30240:CDS |
GGCGTTGAACTTGAGGAGGA+TGG | 0.522989 | 6.2:+45239539 | MS.gene30240:CDS |
GTTCTCGATGCACATAGTAA+TGG | 0.524193 | 6.2:+45237548 | MS.gene30240:CDS |
TGAGAGCATAGTGTACTAAA+GGG | 0.524506 | 6.2:-45239337 | None:intergenic |
AAAGTCAATATCATAATCCA+TGG | 0.524649 | 6.2:-45235730 | None:intergenic |
GCTCAAATGTGTGATTGAAT+CGG | 0.524972 | 6.2:+45240403 | MS.gene30240:CDS |
TACCGACTTCCGTTCCTCAC+GGG | 0.526382 | 6.2:-45237497 | None:intergenic |
GGAACCCATGTTTGTGCCAA+AGG | 0.526754 | 6.2:-45239056 | None:intergenic |
TTCTTTGAACTGTGGCATTG+TGG | 0.528686 | 6.2:+45240856 | MS.gene30240:CDS |
CTACAATGAAGCGAATCTGC+AGG | 0.533175 | 6.2:+45240318 | MS.gene30240:CDS |
TGGTTTCAGTCTTCAAGGAA+GGG | 0.536716 | 6.2:-45239787 | None:intergenic |
GATGTTCAACACATGCATCA+TGG | 0.537711 | 6.2:-45239220 | None:intergenic |
TTTACCTTTGGCACAAACAT+GGG | 0.539885 | 6.2:+45239052 | MS.gene30240:CDS |
AAAGACTGAAACTAGAGGTA+GGG | 0.540963 | 6.2:+45240900 | MS.gene30240:CDS |
TTCTGGCGTTGAACTTGAGG+AGG | 0.543428 | 6.2:+45239535 | MS.gene30240:CDS |
CTCAAGTTTGGGCGCCCGTG+AGG | 0.544969 | 6.2:+45237483 | MS.gene30240:CDS |
TGATGGCATTATGCTTAATG+AGG | 0.545096 | 6.2:-45240537 | None:intergenic |
TGTCAATATCTCCAAAATCT+CGG | 0.545224 | 6.2:-45239009 | None:intergenic |
AGCACACTCCCTATTGCTGC+TGG | 0.545790 | 6.2:+45240470 | MS.gene30240:CDS |
ATTCCTCCAAATGGTTCTTG+AGG | 0.546024 | 6.2:-45240605 | None:intergenic |
ACATGGTTATTGCCTAATCA+AGG | 0.549443 | 6.2:+45237403 | MS.gene30240:CDS |
TAAATGGAACAGTTCATTCG+AGG | 0.550878 | 6.2:+45239585 | MS.gene30240:CDS |
GATTAACTATGCTCCTGAAG+TGG | 0.553438 | 6.2:+45237835 | MS.gene30240:CDS |
AAAAGACTGAAACTAGAGGT+AGG | 0.555056 | 6.2:+45240899 | MS.gene30240:CDS |
GTCTTGCAAGATTATTTCAG+TGG | 0.557527 | 6.2:+45239866 | MS.gene30240:CDS |
TGATCTTTCGAGAAGGCCAA+CGG | 0.557990 | 6.2:-45240355 | None:intergenic |
TCACAAAACATGTGTTTCTG+TGG | 0.558067 | 6.2:+45239284 | MS.gene30240:CDS |
TGATTAGGCAATAACCATGT+GGG | 0.558445 | 6.2:-45237400 | None:intergenic |
TGCCTCGCCGGATATGGAGG+AGG | 0.561475 | 6.2:+45239661 | MS.gene30240:CDS |
CGCCCGTGAGGAACGGAAGT+CGG | 0.562164 | 6.2:+45237495 | MS.gene30240:CDS |
GCATTATGCTTAATGAGGTA+TGG | 0.563307 | 6.2:-45240532 | None:intergenic |
TGCAGATTTGCAGGAGTGCA+TGG | 0.563685 | 6.2:+45240979 | MS.gene30240:CDS |
ACAGCAACACATGATTGTCC+TGG | 0.563896 | 6.2:-45237785 | None:intergenic |
TAGACATGATGATGCCTCGC+CGG | 0.566773 | 6.2:+45239649 | MS.gene30240:CDS |
AAGACTGAAACTAGAGGTAG+GGG | 0.567055 | 6.2:+45240901 | MS.gene30240:CDS |
GTTTGGGCGCCCGTGAGGAA+CGG | 0.567751 | 6.2:+45237488 | MS.gene30240:CDS |
TAAAGTCTGCAAAGCACTTG+AGG | 0.568169 | 6.2:+45237859 | MS.gene30240:CDS |
GAAGCTCGGTTGAGAGCTCG+GGG | 0.572404 | 6.2:+45241068 | MS.gene30240:CDS |
TCTTGCAAGATTATTTCAGT+GGG | 0.573681 | 6.2:+45239867 | MS.gene30240:CDS |
AAGGATGCTGCAAAGAGCCT+AGG | 0.585131 | 6.2:+45239896 | MS.gene30240:CDS |
CAAAATTTATTGATACTAGG+AGG | 0.585345 | 6.2:-45239443 | None:intergenic |
ATTTGAGCTTGGACAGCGAA+CGG | 0.585917 | 6.2:-45240388 | None:intergenic |
TGTTTACAAAGTTCTCATAC+CGG | 0.592559 | 6.2:+45239389 | MS.gene30240:CDS |
GAACCTCAAGAACCATTTGG+AGG | 0.595264 | 6.2:+45240602 | MS.gene30240:CDS |
AAATATCATGCACAACAAGC+CGG | 0.597148 | 6.2:-45241033 | None:intergenic |
TCATATGCAAATGCAGCACA+TGG | 0.598418 | 6.2:+45240748 | MS.gene30240:CDS |
ATTTGGATGATGATCAAGAG+TGG | 0.598828 | 6.2:+45240939 | MS.gene30240:CDS |
GGACATTATAATGCAGAGCA+TGG | 0.609549 | 6.2:-45237730 | None:intergenic |
GTGCATCGAGAACAAATGGT+TGG | 0.611524 | 6.2:-45237538 | None:intergenic |
TATCATAGATTCTCACACAT+GGG | 0.612412 | 6.2:+45239193 | MS.gene30240:CDS |
TTTAGGGTTTCTTTGAACTG+TGG | 0.615467 | 6.2:+45240848 | MS.gene30240:CDS |
TGATGCCTCGCCGGATATGG+AGG | 0.619277 | 6.2:+45239658 | MS.gene30240:CDS |
GAGTTAGATACATGATCCAA+AGG | 0.619901 | 6.2:-45235765 | None:intergenic |
GCCTCGCCGGATATGGAGGA+GGG | 0.620542 | 6.2:+45239662 | MS.gene30240:CDS |
ATATCATAGATTCTCACACA+TGG | 0.620841 | 6.2:+45239192 | MS.gene30240:CDS |
GGCAGCACGGAATATCCCGT+TGG | 0.622543 | 6.2:+45240339 | MS.gene30240:CDS |
GATGCTGCAAAGAGCCTAGG+AGG | 0.625305 | 6.2:+45239899 | MS.gene30240:CDS |
TCCCTCCTCCATATCCGGCG+AGG | 0.628096 | 6.2:-45239663 | None:intergenic |
ATCATAGATTCTCACACATG+GGG | 0.628408 | 6.2:+45239194 | MS.gene30240:CDS |
CCACCTTTACAAAACCCACA+TGG | 0.631339 | 6.2:+45237386 | MS.gene30240:CDS |
AAGCGAATCTGCAGGCAGCA+CGG | 0.638097 | 6.2:+45240326 | MS.gene30240:CDS |
TTGATTAGGCAATAACCATG+TGG | 0.639504 | 6.2:-45237401 | None:intergenic |
TTTGGAGGAATGCTAATCGA+AGG | 0.641496 | 6.2:+45240617 | MS.gene30240:CDS |
TGTCCTGGAGGTTCAAACAC+CGG | 0.651803 | 6.2:-45237770 | None:intergenic |
AAAACACTTCTATGCCTGCA+TGG | 0.651967 | 6.2:-45239077 | None:intergenic |
TATGATATAGAATGCTACCT+CGG | 0.654836 | 6.2:-45239177 | None:intergenic |
CCGGCAAAGCCAAAGTTCCG+CGG | 0.659988 | 6.2:-45237751 | None:intergenic |
CATCACTTACAACAAGGTCA+AGG | 0.666531 | 6.2:+45239239 | MS.gene30240:CDS |
TGCTAAAAGACTGAAACTAG+AGG | 0.668005 | 6.2:+45240895 | MS.gene30240:CDS |
ATATGAACAAAATCGGAACA+TGG | 0.669337 | 6.2:-45240731 | None:intergenic |
GCAACACATGATTGTCCTGG+AGG | 0.677274 | 6.2:-45237782 | None:intergenic |
TGTGTGATTGAATCGGTCCA+CGG | 0.682338 | 6.2:+45240410 | MS.gene30240:CDS |
GCTCTGCATTATAATGTCCG+CGG | 0.700570 | 6.2:+45237734 | MS.gene30240:CDS |
AGTTTGCATGTCAATAACCG+AGG | 0.703589 | 6.2:+45239160 | MS.gene30240:CDS |
AAACCGTCGTTGAGAAAACG+CGG | 0.713944 | 6.2:+45239815 | MS.gene30240:CDS |
TGAACAAAATCGGAACATGG+AGG | 0.716509 | 6.2:-45240728 | None:intergenic |
TGGCATTGTGGAATTGAGAG+AGG | 0.720051 | 6.2:+45240868 | MS.gene30240:CDS |
AAAGGTGGTAGAGCTATATG+GGG | 0.722178 | 6.2:-45237371 | None:intergenic |
GTTGAACATCACTTACAACA+AGG | 0.722760 | 6.2:+45239233 | MS.gene30240:CDS |
CAAATGCTCCTTCAACACCG+TGG | 0.738899 | 6.2:-45240427 | None:intergenic |
AAGCTCGGTTGAGAGCTCGG+GGG | 0.778694 | 6.2:+45241069 | MS.gene30240:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTATCAAATTATCAT+TGG | + | chr6.2:45237025-45237044 | MS.gene30240:intron | 10.0% |
!! | AATATTATATAGACATTGTT+TGG | + | chr6.2:45237950-45237969 | MS.gene30240:intron | 15.0% |
!! | AATTTAGTAGATTGAATAAT+CGG | - | chr6.2:45239623-45239642 | None:intergenic | 15.0% |
!! | ATAAAATATAACTAATGTGT+TGG | - | chr6.2:45237014-45237033 | None:intergenic | 15.0% |
!! | ATATTATATAGACATTGTTT+GGG | + | chr6.2:45237951-45237970 | MS.gene30240:intron | 15.0% |
!! | CTATTCAAAAATAAAATTCT+AGG | - | chr6.2:45236017-45236036 | None:intergenic | 15.0% |
!! | GAAATTGTTGAAATAATAAA+TGG | + | chr6.2:45239569-45239588 | MS.gene30240:CDS | 15.0% |
!! | TAATAAATCCCTATATTATA+AGG | + | chr6.2:45238723-45238742 | MS.gene30240:intron | 15.0% |
!!! | AACGAAACAAAAAATTTTAA+GGG | + | chr6.2:45238793-45238812 | MS.gene30240:intron | 15.0% |
!!! | AATAAATTTTGTGAACAAAA+GGG | + | chr6.2:45239455-45239474 | MS.gene30240:CDS | 15.0% |
!!! | ATTTTTGAATAGTAGTTATA+TGG | + | chr6.2:45236025-45236044 | MS.gene30240:intron | 15.0% |
!!! | TAACGAAACAAAAAATTTTA+AGG | + | chr6.2:45238792-45238811 | MS.gene30240:intron | 15.0% |
!!! | TGTTTTTGTTTTTGTATTTT+TGG | + | chr6.2:45236113-45236132 | MS.gene30240:intron | 15.0% |
!!! | TTCATTTATTTTCTTATGTT+TGG | + | chr6.2:45237906-45237925 | MS.gene30240:intron | 15.0% |
!!! | TTTTTATGCCTTATAATATA+GGG | - | chr6.2:45238734-45238753 | None:intergenic | 15.0% |
!!! | TTTTTCAATAATTTTGCTTT+TGG | + | chr6.2:45236341-45236360 | MS.gene30240:intron | 15.0% |
!!! | TTTTTTATGCCTTATAATAT+AGG | - | chr6.2:45238735-45238754 | None:intergenic | 15.0% |
!! | AAAACAAAAACAATAATCTG+TGG | - | chr6.2:45236105-45236124 | None:intergenic | 20.0% |
!! | AAACATAAACCAAATATTGA+AGG | - | chr6.2:45238704-45238723 | None:intergenic | 20.0% |
!! | AAATCAATGTATAAAACTTG+AGG | - | chr6.2:45238248-45238267 | None:intergenic | 20.0% |
!! | AACATAAACCAAATATTGAA+GGG | - | chr6.2:45238703-45238722 | None:intergenic | 20.0% |
!! | AAGTTTCATCATTACTAATT+TGG | + | chr6.2:45236665-45236684 | MS.gene30240:intron | 20.0% |
!! | ATTTGCCAATTTCTAATATA+TGG | - | chr6.2:45238136-45238155 | None:intergenic | 20.0% |
!! | CATAACCATATATTAGAAAT+TGG | + | chr6.2:45238128-45238147 | MS.gene30240:intron | 20.0% |
!! | TAAAGAGGGATATAAATAAA+GGG | - | chr6.2:45238468-45238487 | None:intergenic | 20.0% |
!! | TCACAAAATTTATTGATACT+AGG | - | chr6.2:45239449-45239468 | None:intergenic | 20.0% |
!! | TTAAAAATTGTAATATGCCA+AGG | + | chr6.2:45238864-45238883 | MS.gene30240:intron | 20.0% |
!!! | AAATAATTTTCGTTCTTCTT+AGG | - | chr6.2:45240566-45240585 | None:intergenic | 20.0% |
!!! | ATATGGAATATATTTTGCTA+AGG | + | chr6.2:45236042-45236061 | MS.gene30240:intron | 20.0% |
!!! | CAATAAATTTTGTGAACAAA+AGG | + | chr6.2:45239454-45239473 | MS.gene30240:CDS | 20.0% |
!!! | CAGAAACATTAATATGTTTT+TGG | - | chr6.2:45238891-45238910 | None:intergenic | 20.0% |
!!! | CCTCAAAAGTTTATTTTTTA+AGG | - | chr6.2:45236771-45236790 | None:intergenic | 20.0% |
!!! | CCTTAAAAAATAAACTTTTG+AGG | + | chr6.2:45236768-45236787 | MS.gene30240:intron | 20.0% |
!!! | TTGATGACATAAATGATATA+GGG | + | chr6.2:45239726-45239745 | MS.gene30240:CDS | 20.0% |
!!! | TTTGATGACATAAATGATAT+AGG | + | chr6.2:45239725-45239744 | MS.gene30240:CDS | 20.0% |
!!! | TTTTCTGATTTAGTTGATTT+AGG | + | chr6.2:45239930-45239949 | MS.gene30240:intron | 20.0% |
! | AAAAGAGTCAAATAATGTCA+AGG | - | chr6.2:45238286-45238305 | None:intergenic | 25.0% |
! | AAAGTCAATATCATAATCCA+TGG | - | chr6.2:45235733-45235752 | None:intergenic | 25.0% |
! | AACACAAACATAACAAGATA+AGG | - | chr6.2:45235892-45235911 | None:intergenic | 25.0% |
! | ACAAAATTTCCAAAGTCTTA+AGG | + | chr6.2:45239508-45239527 | MS.gene30240:CDS | 25.0% |
! | AGATGATATCATAAGGTTTA+GGG | + | chr6.2:45240832-45240851 | MS.gene30240:CDS | 25.0% |
! | ATATATCCAATAACAGCAAT+AGG | - | chr6.2:45240276-45240295 | None:intergenic | 25.0% |
! | CAAAATTTATTGATACTAGG+AGG | - | chr6.2:45239446-45239465 | None:intergenic | 25.0% |
! | CACTAATTAGATTTACAAGT+AGG | + | chr6.2:45238527-45238546 | MS.gene30240:intron | 25.0% |
! | CATATAGAGATGATATCATA+AGG | + | chr6.2:45240825-45240844 | MS.gene30240:CDS | 25.0% |
! | CATTTGCATATGAACAAAAT+CGG | - | chr6.2:45240741-45240760 | None:intergenic | 25.0% |
! | CTAAAGAGGGATATAAATAA+AGG | - | chr6.2:45238469-45238488 | None:intergenic | 25.0% |
! | CTAGAATAATACTGAACATT+AGG | - | chr6.2:45237689-45237708 | None:intergenic | 25.0% |
! | TAATTTGGTCACTAGAATAA+AGG | + | chr6.2:45236680-45236699 | MS.gene30240:intron | 25.0% |
! | TAGATTTACAAGTAGGTTTA+GGG | + | chr6.2:45238534-45238553 | MS.gene30240:intron | 25.0% |
! | TGAAACTCATAATTTACCTT+TGG | + | chr6.2:45239040-45239059 | MS.gene30240:CDS | 25.0% |
! | TGCAAAATATGTAAAACCAA+TGG | - | chr6.2:45236568-45236587 | None:intergenic | 25.0% |
! | TGCATTAATTTCTTTGTACT+TGG | + | chr6.2:45236584-45236603 | MS.gene30240:intron | 25.0% |
! | TTAGATTTACAAGTAGGTTT+AGG | + | chr6.2:45238533-45238552 | MS.gene30240:intron | 25.0% |
! | TTGAAATGTTTGACGATATA+AGG | + | chr6.2:45236849-45236868 | MS.gene30240:intron | 25.0% |
!! | AGCTTTTATATTGACATCTT+TGG | - | chr6.2:45237196-45237215 | None:intergenic | 25.0% |
!! | ATGTATATGTTTTCTGTTGA+CGG | + | chr6.2:45237599-45237618 | MS.gene30240:CDS | 25.0% |
!! | GAGATATTTTGCAAGAAAAA+AGG | - | chr6.2:45235798-45235817 | None:intergenic | 25.0% |
!! | TTGACATTATTTGACTCTTT+TGG | + | chr6.2:45238285-45238304 | MS.gene30240:intron | 25.0% |
!! | TTTCAAATACTCGTGATTTT+AGG | + | chr6.2:45236813-45236832 | MS.gene30240:intron | 25.0% |
!!! | AAAAATTGCTCAAGTTTTGA+TGG | + | chr6.2:45239122-45239141 | MS.gene30240:CDS | 25.0% |
!!! | AAGTTTTGATGGTTATTGTA+TGG | + | chr6.2:45239133-45239152 | MS.gene30240:CDS | 25.0% |
!!! | AGTTTTGATGGTTATTGTAT+GGG | + | chr6.2:45239134-45239153 | MS.gene30240:CDS | 25.0% |
!!! | ATATTGACTTTGAAACTTCA+TGG | + | chr6.2:45235742-45235761 | MS.gene30240:CDS | 25.0% |
!!! | ATGGACATTTTAACATTATC+AGG | + | chr6.2:45240998-45241017 | MS.gene30240:CDS | 25.0% |
!!! | ATTAATATGTTTTTGGTCCT+TGG | - | chr6.2:45238884-45238903 | None:intergenic | 25.0% |
!!! | ATTCTAGTAAAGAGTATTCA+AGG | + | chr6.2:45237702-45237721 | MS.gene30240:CDS | 25.0% |
!!! | TCTTGTTATGTTTGTGTTTT+TGG | + | chr6.2:45235894-45235913 | MS.gene30240:intron | 25.0% |
AAAAAATGTGTCTGCAGTTA+TGG | + | chr6.2:45240057-45240076 | MS.gene30240:intron | 30.0% | |
AAAGTCCAAATAGGAGAAAA+AGG | - | chr6.2:45235828-45235847 | None:intergenic | 30.0% | |
AATAAGGTGAAAACAGCTTA+TGG | + | chr6.2:45238012-45238031 | MS.gene30240:intron | 30.0% | |
AATGGAATAAACATGCAGAA+AGG | - | chr6.2:45236550-45236569 | None:intergenic | 30.0% | |
AATTGATTGAGAAATCCAAG+AGG | + | chr6.2:45235990-45236009 | MS.gene30240:intron | 30.0% | |
AGATTTACAAGTAGGTTTAG+GGG | + | chr6.2:45238535-45238554 | MS.gene30240:intron | 30.0% | |
ATAAAGGGAGAAATACATCA+TGG | - | chr6.2:45238453-45238472 | None:intergenic | 30.0% | |
ATAGTGTACTAAAGGGTAAT+CGG | - | chr6.2:45239333-45239352 | None:intergenic | 30.0% | |
ATATCATAGATTCTCACACA+TGG | + | chr6.2:45239192-45239211 | MS.gene30240:CDS | 30.0% | |
ATATGAACAAAATCGGAACA+TGG | - | chr6.2:45240734-45240753 | None:intergenic | 30.0% | |
ATGAACATTGTAGTTTATGC+TGG | + | chr6.2:45237250-45237269 | MS.gene30240:intron | 30.0% | |
ATGTTTGACGATATAAGGTA+AGG | + | chr6.2:45236854-45236873 | MS.gene30240:intron | 30.0% | |
ATTGATTGAGAAATCCAAGA+GGG | + | chr6.2:45235991-45236010 | MS.gene30240:intron | 30.0% | |
CAGGAATTATAGACAAAATC+TGG | - | chr6.2:45236636-45236655 | None:intergenic | 30.0% | |
CTTCTTGTACTATATCTTGT+AGG | - | chr6.2:45238199-45238218 | None:intergenic | 30.0% | |
GAGATGATATCATAAGGTTT+AGG | + | chr6.2:45240831-45240850 | MS.gene30240:CDS | 30.0% | |
GATGAAGATTGTGACTATAA+AGG | + | chr6.2:45240799-45240818 | MS.gene30240:CDS | 30.0% | |
GCCTATCATAGAAAATATCT+CGG | + | chr6.2:45238562-45238581 | MS.gene30240:intron | 30.0% | |
GGCATTTGATATCAAGTATT+TGG | + | chr6.2:45240922-45240941 | MS.gene30240:CDS | 30.0% | |
GGGACTAAAACAAATAAACA+AGG | - | chr6.2:45238683-45238702 | None:intergenic | 30.0% | |
GTCACTGAAATTGTAATCAT+AGG | + | chr6.2:45236717-45236736 | MS.gene30240:intron | 30.0% | |
GTGAAACAAAAAAATGCACA+AGG | - | chr6.2:45238626-45238645 | None:intergenic | 30.0% | |
GTTTGAATTGACAATGAGTT+TGG | - | chr6.2:45236270-45236289 | None:intergenic | 30.0% | |
TAGTACATAATCATCACTTC+CGG | - | chr6.2:45239411-45239430 | None:intergenic | 30.0% | |
TATCATAGATTCTCACACAT+GGG | + | chr6.2:45239193-45239212 | MS.gene30240:CDS | 30.0% | |
TATGATATAGAATGCTACCT+CGG | - | chr6.2:45239180-45239199 | None:intergenic | 30.0% | |
TCAAACTATTCCATATTCAC+AGG | + | chr6.2:45236610-45236629 | MS.gene30240:intron | 30.0% | |
TCAAATAATGTCAAGGAAGT+TGG | - | chr6.2:45238279-45238298 | None:intergenic | 30.0% | |
TCATCAGAAAAAGTCCAAAT+AGG | - | chr6.2:45235837-45235856 | None:intergenic | 30.0% | |
TCCAAAATAACATCTGTTGA+AGG | - | chr6.2:45240677-45240696 | None:intergenic | 30.0% | |
TCGAAACTTCAACAAAATCA+CGG | - | chr6.2:45236204-45236223 | None:intergenic | 30.0% | |
TCTTGCAAGATTATTTCAGT+GGG | + | chr6.2:45239867-45239886 | MS.gene30240:CDS | 30.0% | |
TGTCAATATCTCCAAAATCT+CGG | - | chr6.2:45239012-45239031 | None:intergenic | 30.0% | |
TGTTTACAAAGTTCTCATAC+CGG | + | chr6.2:45239389-45239408 | MS.gene30240:CDS | 30.0% | |
TTGTATAGCTAGTTAGTACA+TGG | - | chr6.2:45236939-45236958 | None:intergenic | 30.0% | |
TTGTTGTCAGTTGAATAACA+TGG | + | chr6.2:45238938-45238957 | MS.gene30240:intron | 30.0% | |
TTTCTGCATGTTTATTCCAT+TGG | + | chr6.2:45236549-45236568 | MS.gene30240:intron | 30.0% | |
! | AACAACCTTTTTCTCCTATT+TGG | + | chr6.2:45235820-45235839 | MS.gene30240:CDS | 30.0% |
! | AGATGAAAATGTGTTTTCCA+TGG | + | chr6.2:45235713-45235732 | MS.gene30240:CDS | 30.0% |
! | CATGATATTTTGTCCATTCT+TGG | + | chr6.2:45241046-45241065 | MS.gene30240:CDS | 30.0% |
! | CTAAAACCTATTGCTGTTAT+TGG | + | chr6.2:45240267-45240286 | MS.gene30240:intron | 30.0% |
! | GAAAACACATTTTCATCTAG+TGG | - | chr6.2:45235711-45235730 | None:intergenic | 30.0% |
! | GTCTATAATTCCTGTTTTCT+TGG | + | chr6.2:45236642-45236661 | MS.gene30240:intron | 30.0% |
! | TACAATTTCACGGACTAATT+TGG | + | chr6.2:45237117-45237136 | MS.gene30240:intron | 30.0% |
! | TTTGAGGAGTTCAGAAATTT+TGG | + | chr6.2:45238393-45238412 | MS.gene30240:CDS | 30.0% |
!! | GTTTTAGTCCCTTCAATATT+TGG | + | chr6.2:45238692-45238711 | MS.gene30240:intron | 30.0% |
!! | TCCTTCAACAGATGTTATTT+TGG | + | chr6.2:45240673-45240692 | MS.gene30240:CDS | 30.0% |
!!! | TTCAACAGATGTTATTTTGG+AGG | + | chr6.2:45240676-45240695 | MS.gene30240:CDS | 30.0% |
!!! | TTTTTGTTGTTACCTGAAAG+TGG | - | chr6.2:45237299-45237318 | None:intergenic | 30.0% |
AAAAGACTGAAACTAGAGGT+AGG | + | chr6.2:45240899-45240918 | MS.gene30240:CDS | 35.0% | |
AAAGACTGAAACTAGAGGTA+GGG | + | chr6.2:45240900-45240919 | MS.gene30240:CDS | 35.0% | |
AAAGTCCCTAAAATCGTGAA+TGG | - | chr6.2:45236899-45236918 | None:intergenic | 35.0% | |
AAATATCATGCACAACAAGC+CGG | - | chr6.2:45241036-45241055 | None:intergenic | 35.0% | |
AAGCTATCCTGAAGAGATTA+CGG | + | chr6.2:45237988-45238007 | MS.gene30240:intron | 35.0% | |
AATAAAATTCTAGGCCCTCT+TGG | - | chr6.2:45236008-45236027 | None:intergenic | 35.0% | |
ACATGGTTATTGCCTAATCA+AGG | + | chr6.2:45237403-45237422 | MS.gene30240:CDS | 35.0% | |
AGAAAATGAACATACCTCCT+AGG | - | chr6.2:45239916-45239935 | None:intergenic | 35.0% | |
ATCATAGATTCTCACACATG+GGG | + | chr6.2:45239194-45239213 | MS.gene30240:CDS | 35.0% | |
ATTTACCTTTGGCACAAACA+TGG | + | chr6.2:45239051-45239070 | MS.gene30240:CDS | 35.0% | |
ATTTGGATGATGATCAAGAG+TGG | + | chr6.2:45240939-45240958 | MS.gene30240:CDS | 35.0% | |
CATAGAAAATATCTCGGCTT+TGG | + | chr6.2:45238568-45238587 | MS.gene30240:intron | 35.0% | |
CGAAGTAGAAGGTTCATTAA+AGG | - | chr6.2:45240498-45240517 | None:intergenic | 35.0% | |
CTGAAGAGATTACGGAAATA+AGG | + | chr6.2:45237996-45238015 | MS.gene30240:intron | 35.0% | |
CTTATTTCCGTAATCTCTTC+AGG | - | chr6.2:45237998-45238017 | None:intergenic | 35.0% | |
GAAAAAACTACCTGACTGTA+TGG | - | chr6.2:45238424-45238443 | None:intergenic | 35.0% | |
GAATGTTCTTGCTCAAGTTT+GGG | + | chr6.2:45237472-45237491 | MS.gene30240:CDS | 35.0% | |
GACACCATCATACAATTTCA+CGG | + | chr6.2:45237107-45237126 | MS.gene30240:intron | 35.0% | |
GAGTTAGATACATGATCCAA+AGG | - | chr6.2:45235768-45235787 | None:intergenic | 35.0% | |
GATGAAACTTCCAAGAAAAC+AGG | - | chr6.2:45236655-45236674 | None:intergenic | 35.0% | |
GCACAAGGCTAAAAATCTAT+AGG | - | chr6.2:45238611-45238630 | None:intergenic | 35.0% | |
GCATTATGCTTAATGAGGTA+TGG | - | chr6.2:45240535-45240554 | None:intergenic | 35.0% | |
GCTCAAATGTGTGATTGAAT+CGG | + | chr6.2:45240403-45240422 | MS.gene30240:CDS | 35.0% | |
GTCTATCTTCGTTACATATC+TGG | - | chr6.2:45238977-45238996 | None:intergenic | 35.0% | |
GTCTTGCAAGATTATTTCAG+TGG | + | chr6.2:45239866-45239885 | MS.gene30240:CDS | 35.0% | |
GTTGAACATCACTTACAACA+AGG | + | chr6.2:45239233-45239252 | MS.gene30240:CDS | 35.0% | |
TAAAGGTGGTAGAGCTATAT+GGG | - | chr6.2:45237375-45237394 | None:intergenic | 35.0% | |
TAAATGGAACAGTTCATTCG+AGG | + | chr6.2:45239585-45239604 | MS.gene30240:CDS | 35.0% | |
TAGTCCGTGAAATTGTATGA+TGG | - | chr6.2:45237114-45237133 | None:intergenic | 35.0% | |
TATCAGGAAGCAACATTATC+CGG | + | chr6.2:45241014-45241033 | MS.gene30240:CDS | 35.0% | |
TCTATGTATCTATGAAGCAC+TGG | - | chr6.2:45237089-45237108 | None:intergenic | 35.0% | |
TGAATGTTCTTGCTCAAGTT+TGG | + | chr6.2:45237471-45237490 | MS.gene30240:CDS | 35.0% | |
TGATGATCAAGAGTGGATAT+TGG | + | chr6.2:45240946-45240965 | MS.gene30240:CDS | 35.0% | |
TGATGGCATTATGCTTAATG+AGG | - | chr6.2:45240540-45240559 | None:intergenic | 35.0% | |
TGATTAGGCAATAACCATGT+GGG | - | chr6.2:45237403-45237422 | None:intergenic | 35.0% | |
TGCTAAAAGACTGAAACTAG+AGG | + | chr6.2:45240895-45240914 | MS.gene30240:CDS | 35.0% | |
TTATTTCAGTGGGAGTCTAA+AGG | + | chr6.2:45239877-45239896 | MS.gene30240:CDS | 35.0% | |
TTCAATCACACATTTGAGCT+TGG | - | chr6.2:45240402-45240421 | None:intergenic | 35.0% | |
TTGATTAGGCAATAACCATG+TGG | - | chr6.2:45237404-45237423 | None:intergenic | 35.0% | |
TTGCAAGAAAAAAGGATGCA+TGG | - | chr6.2:45235790-45235809 | None:intergenic | 35.0% | |
TTGTGACAAAAAAGCTCTTC+CGG | - | chr6.2:45239270-45239289 | None:intergenic | 35.0% | |
TTTACCTTTGGCACAAACAT+GGG | + | chr6.2:45239052-45239071 | MS.gene30240:CDS | 35.0% | |
! | ACCTTTTTGATCTTTCGAGA+AGG | - | chr6.2:45240365-45240384 | None:intergenic | 35.0% |
! | ACTGACCATTCACGATTTTA+GGG | + | chr6.2:45236891-45236910 | MS.gene30240:intron | 35.0% |
! | AGAATCAAATGTCACTTGAG+TGG | - | chr6.2:45237226-45237245 | None:intergenic | 35.0% |
! | ATGAGAGCATAGTGTACTAA+AGG | - | chr6.2:45239341-45239360 | None:intergenic | 35.0% |
! | ATTCATGCAATCTGAAGTGT+CGG | - | chr6.2:45236964-45236983 | None:intergenic | 35.0% |
! | GAATGCATTATCCGAGATTT+TGG | + | chr6.2:45238998-45239017 | MS.gene30240:CDS | 35.0% |
! | GCCGAGATATTTTCTATGAT+AGG | - | chr6.2:45238566-45238585 | None:intergenic | 35.0% |
! | GTGTCATTCTTTCCTTGATT+AGG | - | chr6.2:45237418-45237437 | None:intergenic | 35.0% |
! | TCAAACTTGTTCGAAGTAGA+AGG | - | chr6.2:45240509-45240528 | None:intergenic | 35.0% |
! | TCACAAAACATGTGTTTCTG+TGG | + | chr6.2:45239284-45239303 | MS.gene30240:CDS | 35.0% |
! | TGAGAGCATAGTGTACTAAA+GGG | - | chr6.2:45239340-45239359 | None:intergenic | 35.0% |
! | TGTGAACAAAAGGGTTTGTT+AGG | + | chr6.2:45239464-45239483 | MS.gene30240:CDS | 35.0% |
! | TTTAGGGTTTCTTTGAACTG+TGG | + | chr6.2:45240848-45240867 | MS.gene30240:CDS | 35.0% |
!! | AATCTTGATGATTTTGCAGG+TGG | + | chr6.2:45239749-45239768 | MS.gene30240:CDS | 35.0% |
!! | GATTTTGGAGATATTGACAG+TGG | + | chr6.2:45239013-45239032 | MS.gene30240:CDS | 35.0% |
!! | GGGTTTGTTAGGATCAATAT+TGG | + | chr6.2:45239475-45239494 | MS.gene30240:CDS | 35.0% |
!! | TAACCATGTGGGTTTTGTAA+AGG | - | chr6.2:45237392-45237411 | None:intergenic | 35.0% |
!! | TTCTCCATGACTTTAACTTG+CGG | + | chr6.2:45239993-45240012 | MS.gene30240:intron | 35.0% |
!!! | AGATGTTATTTTGGAGGATC+AGG | + | chr6.2:45240682-45240701 | MS.gene30240:CDS | 35.0% |
!!! | CTTTTTGGTTTCAGTCTTCA+AGG | - | chr6.2:45239795-45239814 | None:intergenic | 35.0% |
AAAACACTTCTATGCCTGCA+TGG | - | chr6.2:45239080-45239099 | None:intergenic | 40.0% | |
AAAGGTGGTAGAGCTATATG+GGG | - | chr6.2:45237374-45237393 | None:intergenic | 40.0% | |
AAGACTGAAACTAGAGGTAG+GGG | + | chr6.2:45240901-45240920 | MS.gene30240:CDS | 40.0% | |
ACAATGAGTTTGGCAGAATC+AGG | - | chr6.2:45236260-45236279 | None:intergenic | 40.0% | |
ACACACACACACACTAAAGA+GGG | - | chr6.2:45238482-45238501 | None:intergenic | 40.0% | |
AGTTTGCATGTCAATAACCG+AGG | + | chr6.2:45239160-45239179 | MS.gene30240:CDS | 40.0% | |
ATTCCTCCAAATGGTTCTTG+AGG | - | chr6.2:45240608-45240627 | None:intergenic | 40.0% | |
CAAAATCTGGCCTGTGAATA+TGG | - | chr6.2:45236623-45236642 | None:intergenic | 40.0% | |
CAAAGTCTTAAGGTTGCTTC+TGG | + | chr6.2:45239518-45239537 | MS.gene30240:CDS | 40.0% | |
CAATGAGTTTGGCAGAATCA+GGG | - | chr6.2:45236259-45236278 | None:intergenic | 40.0% | |
CAGAAGCAACCTTAAGACTT+TGG | - | chr6.2:45239520-45239539 | None:intergenic | 40.0% | |
CAGATTCGCTTCATTGTAGT+TGG | - | chr6.2:45240317-45240336 | None:intergenic | 40.0% | |
CATCACTTACAACAAGGTCA+AGG | + | chr6.2:45239239-45239258 | MS.gene30240:CDS | 40.0% | |
CTATGTGCATCGAGAACAAA+TGG | - | chr6.2:45237545-45237564 | None:intergenic | 40.0% | |
GATGAATCCTTGAAGCTTCT+AGG | - | chr6.2:45240709-45240728 | None:intergenic | 40.0% | |
GATGTTCAACACATGCATCA+TGG | - | chr6.2:45239223-45239242 | None:intergenic | 40.0% | |
GATTAACTATGCTCCTGAAG+TGG | + | chr6.2:45237835-45237854 | MS.gene30240:CDS | 40.0% | |
GCCTTCTCGAAAGATCAAAA+AGG | + | chr6.2:45240361-45240380 | MS.gene30240:CDS | 40.0% | |
GGACATTATAATGCAGAGCA+TGG | - | chr6.2:45237733-45237752 | None:intergenic | 40.0% | |
GTAAAGGTGGTAGAGCTATA+TGG | - | chr6.2:45237376-45237395 | None:intergenic | 40.0% | |
GTTCTCGATGCACATAGTAA+TGG | + | chr6.2:45237548-45237567 | MS.gene30240:CDS | 40.0% | |
GTTGGACAAACTGTACAACA+AGG | - | chr6.2:45240299-45240318 | None:intergenic | 40.0% | |
TAAAGGAACCAGCAGCAATA+GGG | - | chr6.2:45240481-45240500 | None:intergenic | 40.0% | |
TCAGAACCTCAAGAACCATT+TGG | + | chr6.2:45240599-45240618 | MS.gene30240:CDS | 40.0% | |
TCATATGCAAATGCAGCACA+TGG | + | chr6.2:45240748-45240767 | MS.gene30240:CDS | 40.0% | |
TCGATTAGCATTCCTCCAAA+TGG | - | chr6.2:45240617-45240636 | None:intergenic | 40.0% | |
TGAACAAAATCGGAACATGG+AGG | - | chr6.2:45240731-45240750 | None:intergenic | 40.0% | |
TGAACATTAGGAGTCCATTC+AGG | - | chr6.2:45237677-45237696 | None:intergenic | 40.0% | |
TGACGATATAAGGTAAGGTC+TGG | + | chr6.2:45236859-45236878 | MS.gene30240:intron | 40.0% | |
TGATTGAAGCTACCACTTTC+AGG | + | chr6.2:45237284-45237303 | MS.gene30240:intron | 40.0% | |
TGGTTTCAGTCTTCAAGGAA+GGG | - | chr6.2:45239790-45239809 | None:intergenic | 40.0% | |
TTAAAGGAACCAGCAGCAAT+AGG | - | chr6.2:45240482-45240501 | None:intergenic | 40.0% | |
TTATAATGTCCGCGGAACTT+TGG | + | chr6.2:45237742-45237761 | MS.gene30240:CDS | 40.0% | |
TTCAGATTGCATGAATGCCA+GGG | + | chr6.2:45236968-45236987 | MS.gene30240:intron | 40.0% | |
TTCAGCAGAAGTTACCTGAA+TGG | + | chr6.2:45237660-45237679 | MS.gene30240:CDS | 40.0% | |
TTCTGCTGAAAAACTCTTCC+AGG | - | chr6.2:45237650-45237669 | None:intergenic | 40.0% | |
TTCTGTCGTGATTGATCTAG+TGG | - | chr6.2:45239692-45239711 | None:intergenic | 40.0% | |
TTCTTTGAACTGTGGCATTG+TGG | + | chr6.2:45240856-45240875 | MS.gene30240:CDS | 40.0% | |
TTGCAGACTTTATCCACTTC+AGG | - | chr6.2:45237851-45237870 | None:intergenic | 40.0% | |
TTGGTTTCAGTCTTCAAGGA+AGG | - | chr6.2:45239791-45239810 | None:intergenic | 40.0% | |
TTTGGAGGAATGCTAATCGA+AGG | + | chr6.2:45240617-45240636 | MS.gene30240:CDS | 40.0% | |
TTTGTCCATTCTTGGAAGCT+CGG | + | chr6.2:45241054-45241073 | MS.gene30240:CDS | 40.0% | |
! | ACAATCATGTGTTGCTGTGT+TGG | + | chr6.2:45237790-45237809 | MS.gene30240:CDS | 40.0% |
! | AGAAAATATCTCGGCTTTGG+TGG | + | chr6.2:45238571-45238590 | MS.gene30240:intron | 40.0% |
! | GACTGACCATTCACGATTTT+AGG | + | chr6.2:45236890-45236909 | MS.gene30240:intron | 40.0% |
! | GCTTGTCATCATTTTCGACT+CGG | - | chr6.2:45237337-45237356 | None:intergenic | 40.0% |
! | GGAGAAAACGACGAAGTTTT+AGG | + | chr6.2:45237620-45237639 | MS.gene30240:CDS | 40.0% |
! | TAAAGTCTGCAAAGCACTTG+AGG | + | chr6.2:45237859-45237878 | MS.gene30240:CDS | 40.0% |
! | TCGTTCTTCTTAGGTTCTGA+TGG | - | chr6.2:45240557-45240576 | None:intergenic | 40.0% |
! | TCTCAACGACGGTTTCTTTT+TGG | - | chr6.2:45239810-45239829 | None:intergenic | 40.0% |
!! | CTTTGAAACTTCATGGCCTT+TGG | + | chr6.2:45235749-45235768 | MS.gene30240:CDS | 40.0% |
!! | GGGAATCTTGATGATTTTGC+AGG | + | chr6.2:45239746-45239765 | MS.gene30240:CDS | 40.0% |
!! | TCACTTCGAAAAGCATTCAG+TGG | + | chr6.2:45238817-45238836 | MS.gene30240:intron | 40.0% |
!! | TGTTGAAGGAGCATTTGGTT+TGG | + | chr6.2:45240433-45240452 | MS.gene30240:CDS | 40.0% |
!!! | ATGCAGGCATAGAAGTGTTT+TGG | + | chr6.2:45239079-45239098 | MS.gene30240:CDS | 40.0% |
!!! | CATAGAAGTGTTTTGGCTCA+TGG | + | chr6.2:45239086-45239105 | MS.gene30240:CDS | 40.0% |
!!! | TCTAGTGGCTTTGACTTTTG+AGG | - | chr6.2:45235696-45235715 | None:intergenic | 40.0% |
AAACCGTCGTTGAGAAAACG+CGG | + | chr6.2:45239815-45239834 | MS.gene30240:CDS | 45.0% | |
AAACTGGCAGAAGGTGAAAC+AGG | - | chr6.2:45238357-45238376 | None:intergenic | 45.0% | |
ACAGCAACACATGATTGTCC+TGG | - | chr6.2:45237788-45237807 | None:intergenic | 45.0% | |
AGCATGTGATGCAGATTTGC+AGG | + | chr6.2:45240970-45240989 | MS.gene30240:CDS | 45.0% | |
ATCAGGTCCTAGAAGCTTCA+AGG | + | chr6.2:45240699-45240718 | MS.gene30240:CDS | 45.0% | |
ATTTGAGCTTGGACAGCGAA+CGG | - | chr6.2:45240391-45240410 | None:intergenic | 45.0% | |
CACACACACACACACTAAAG+AGG | - | chr6.2:45238483-45238502 | None:intergenic | 45.0% | |
CCACCTTTACAAAACCCACA+TGG | + | chr6.2:45237386-45237405 | MS.gene30240:CDS | 45.0% | |
CCTCAAATTTACTGCCTGCA+AGG | - | chr6.2:45238380-45238399 | None:intergenic | 45.0% | |
CCTTGCAGGCAGTAAATTTG+AGG | + | chr6.2:45238377-45238396 | MS.gene30240:intron | 45.0% | |
CGGTATAAACTCACGACTTC+AGG | + | chr6.2:45237515-45237534 | MS.gene30240:CDS | 45.0% | |
CTACAATGAAGCGAATCTGC+AGG | + | chr6.2:45240318-45240337 | MS.gene30240:CDS | 45.0% | |
CTTCAGATTGCATGAATGCC+AGG | + | chr6.2:45236967-45236986 | MS.gene30240:intron | 45.0% | |
GAACCTCAAGAACCATTTGG+AGG | + | chr6.2:45240602-45240621 | MS.gene30240:CDS | 45.0% | |
GATCACAACATTGCAGCTTC+AGG | + | chr6.2:45235858-45235877 | MS.gene30240:CDS | 45.0% | |
GCAACCGCAAGTTAAAGTCA+TGG | - | chr6.2:45240000-45240019 | None:intergenic | 45.0% | |
GCTCTGCATTATAATGTCCG+CGG | + | chr6.2:45237734-45237753 | MS.gene30240:CDS | 45.0% | |
GTGCATCGAGAACAAATGGT+TGG | - | chr6.2:45237541-45237560 | None:intergenic | 45.0% | |
TGATCTTTCGAGAAGGCCAA+CGG | - | chr6.2:45240358-45240377 | None:intergenic | 45.0% | |
TGGCATTGTGGAATTGAGAG+AGG | + | chr6.2:45240868-45240887 | MS.gene30240:CDS | 45.0% | |
TGTGTGATTGAATCGGTCCA+CGG | + | chr6.2:45240410-45240429 | MS.gene30240:CDS | 45.0% | |
TTTACTGCCTGCAAGGAAAC+TGG | - | chr6.2:45238373-45238392 | None:intergenic | 45.0% | |
! | ATAGGGAGTGTGCTTGTACT+TGG | - | chr6.2:45240464-45240483 | None:intergenic | 45.0% |
! | GTTTGGTGAGTGTCATGTGA+TGG | + | chr6.2:45237923-45237942 | MS.gene30240:intron | 45.0% |
! | TCTGCAAAGCACTTGAGGTT+AGG | + | chr6.2:45237864-45237883 | MS.gene30240:intron | 45.0% |
! | TTTCCGCGTTTTCTCAACGA+CGG | - | chr6.2:45239821-45239840 | None:intergenic | 45.0% |
! | TTTGGAGCATCCATACAGTC+AGG | + | chr6.2:45238411-45238430 | MS.gene30240:CDS | 45.0% |
!! | CCATGTGGGTTTTGTAAAGG+TGG | - | chr6.2:45237389-45237408 | None:intergenic | 45.0% |
!! | CTAATGTGTTGGTGTCGTGT+TGG | - | chr6.2:45237003-45237022 | None:intergenic | 45.0% |
!! | GACTCTTTTGGCTAACACGT+TGG | + | chr6.2:45238297-45238316 | MS.gene30240:intron | 45.0% |
!! | TATCTCGGCTTTGGTGGTTT+TGG | + | chr6.2:45238577-45238596 | MS.gene30240:intron | 45.0% |
!! | TGAAGCACTGGCATAGACAT+AGG | - | chr6.2:45237077-45237096 | None:intergenic | 45.0% |
!! | TGAGGAGCAAGCTCTAAAGT+TGG | - | chr6.2:45238230-45238249 | None:intergenic | 45.0% |
!!! | AGAAGTGTTTTGGCTCATGG+TGG | + | chr6.2:45239089-45239108 | MS.gene30240:CDS | 45.0% |
!!! | GACGAAGTTTTAGGACTTCC+TGG | + | chr6.2:45237629-45237648 | MS.gene30240:CDS | 45.0% |
!!! | GTGGCTTTGACTTTTGAGGA+AGG | - | chr6.2:45235692-45235711 | None:intergenic | 45.0% |
AAGGATGCTGCAAAGAGCCT+AGG | + | chr6.2:45239896-45239915 | MS.gene30240:CDS | 50.0% | |
CAAATGCTCCTTCAACACCG+TGG | - | chr6.2:45240430-45240449 | None:intergenic | 50.0% | |
CAACAAGGTCAAGGAGTTGC+CGG | + | chr6.2:45239248-45239267 | MS.gene30240:CDS | 50.0% | |
CACAAACATGGGTTCCATGC+AGG | + | chr6.2:45239063-45239082 | MS.gene30240:CDS | 50.0% | |
CTCAACCGAGCTTCCAAGAA+TGG | - | chr6.2:45241062-45241081 | None:intergenic | 50.0% | |
GATCTTTCGAGAAGGCCAAC+GGG | - | chr6.2:45240357-45240376 | None:intergenic | 50.0% | |
GCAACACATGATTGTCCTGG+AGG | - | chr6.2:45237785-45237804 | None:intergenic | 50.0% | |
GGAACCCATGTTTGTGCCAA+AGG | - | chr6.2:45239059-45239078 | None:intergenic | 50.0% | |
TGTCCTGGAGGTTCAAACAC+CGG | - | chr6.2:45237773-45237792 | None:intergenic | 50.0% | |
! | TAGACATGATGATGCCTCGC+CGG | + | chr6.2:45239649-45239668 | MS.gene30240:CDS | 50.0% |
! | TGCAGATTTGCAGGAGTGCA+TGG | + | chr6.2:45240979-45240998 | MS.gene30240:CDS | 50.0% |
! | TGCTTCTGGCGTTGAACTTG+AGG | + | chr6.2:45239532-45239551 | MS.gene30240:CDS | 50.0% |
! | TTCTGGCGTTGAACTTGAGG+AGG | + | chr6.2:45239535-45239554 | MS.gene30240:CDS | 50.0% |
!! | ATACCGACTTCCGTTCCTCA+CGG | - | chr6.2:45237501-45237520 | None:intergenic | 50.0% |
!! | CACGGTGTTGAAGGAGCATT+TGG | + | chr6.2:45240428-45240447 | MS.gene30240:CDS | 50.0% |
!! | TGTTGGTGTCGTGTTGGTGT+CGG | - | chr6.2:45236997-45237016 | None:intergenic | 50.0% |
!!! | AGTGTTTTGGCTCATGGTGG+TGG | + | chr6.2:45239092-45239111 | MS.gene30240:CDS | 50.0% |
AAGCGAATCTGCAGGCAGCA+CGG | + | chr6.2:45240326-45240345 | MS.gene30240:CDS | 55.0% | |
AGCACACTCCCTATTGCTGC+TGG | + | chr6.2:45240470-45240489 | MS.gene30240:CDS | 55.0% | |
CCTGCAAGGAAACTGGCAGA+AGG | - | chr6.2:45238366-45238385 | None:intergenic | 55.0% | |
CCTTCTGCCAGTTTCCTTGC+AGG | + | chr6.2:45238363-45238382 | MS.gene30240:intron | 55.0% | |
GATGCTGCAAAGAGCCTAGG+AGG | + | chr6.2:45239899-45239918 | MS.gene30240:CDS | 55.0% | |
TGGAAGCTCGGTTGAGAGCT+CGG | + | chr6.2:45241066-45241085 | MS.gene30240:CDS | 55.0% | |
TTGCCGGTGTTTGAACCTCC+AGG | + | chr6.2:45237767-45237786 | MS.gene30240:CDS | 55.0% | |
! | GAATCGGTCCACGGTGTTGA+AGG | + | chr6.2:45240419-45240438 | MS.gene30240:CDS | 55.0% |
! | GGCGTTGAACTTGAGGAGGA+TGG | + | chr6.2:45239539-45239558 | MS.gene30240:CDS | 55.0% |
! | TGATGATGCCTCGCCGGATA+TGG | + | chr6.2:45239655-45239674 | MS.gene30240:CDS | 55.0% |
!! | TACCGACTTCCGTTCCTCAC+GGG | - | chr6.2:45237500-45237519 | None:intergenic | 55.0% |
AAGCTCGGTTGAGAGCTCGG+GGG | + | chr6.2:45241069-45241088 | MS.gene30240:CDS | 60.0% | |
CCGGCAAAGCCAAAGTTCCG+CGG | - | chr6.2:45237754-45237773 | None:intergenic | 60.0% | |
GAAGCTCGGTTGAGAGCTCG+GGG | + | chr6.2:45241068-45241087 | MS.gene30240:CDS | 60.0% | |
GGAAGCTCGGTTGAGAGCTC+GGG | + | chr6.2:45241067-45241086 | MS.gene30240:CDS | 60.0% | |
GGCACTCCCTCCTCCATATC+CGG | - | chr6.2:45239671-45239690 | None:intergenic | 60.0% | |
GGCAGCACGGAATATCCCGT+TGG | + | chr6.2:45240339-45240358 | MS.gene30240:CDS | 60.0% | |
TGATGCCTCGCCGGATATGG+AGG | + | chr6.2:45239658-45239677 | MS.gene30240:CDS | 60.0% | |
!! | CCGCGGAACTTTGGCTTTGC+CGG | + | chr6.2:45237751-45237770 | MS.gene30240:CDS | 60.0% |
CGCCCGTGAGGAACGGAAGT+CGG | + | chr6.2:45237495-45237514 | MS.gene30240:CDS | 65.0% | |
CTCAAGTTTGGGCGCCCGTG+AGG | + | chr6.2:45237483-45237502 | MS.gene30240:CDS | 65.0% | |
GCCTCGCCGGATATGGAGGA+GGG | + | chr6.2:45239662-45239681 | MS.gene30240:CDS | 65.0% | |
GTTTGGGCGCCCGTGAGGAA+CGG | + | chr6.2:45237488-45237507 | MS.gene30240:CDS | 65.0% | |
TCCCTCCTCCATATCCGGCG+AGG | - | chr6.2:45239666-45239685 | None:intergenic | 65.0% | |
TGCCTCGCCGGATATGGAGG+AGG | + | chr6.2:45239661-45239680 | MS.gene30240:CDS | 65.0% | |
!! | CGTGTTGGTGTCGGACACCC+TGG | - | chr6.2:45236988-45237007 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 45235660 | 45241096 | 45235660 | ID=MS.gene30240 |
chr6.2 | mRNA | 45235660 | 45241096 | 45235660 | ID=MS.gene30240.t1;Parent=MS.gene30240 |
chr6.2 | exon | 45235660 | 45235879 | 45235660 | ID=MS.gene30240.t1.exon1;Parent=MS.gene30240.t1 |
chr6.2 | CDS | 45235660 | 45235879 | 45235660 | ID=cds.MS.gene30240.t1;Parent=MS.gene30240.t1 |
chr6.2 | exon | 45237306 | 45237880 | 45237306 | ID=MS.gene30240.t1.exon2;Parent=MS.gene30240.t1 |
chr6.2 | CDS | 45237306 | 45237880 | 45237306 | ID=cds.MS.gene30240.t1;Parent=MS.gene30240.t1 |
chr6.2 | exon | 45238385 | 45238432 | 45238385 | ID=MS.gene30240.t1.exon3;Parent=MS.gene30240.t1 |
chr6.2 | CDS | 45238385 | 45238432 | 45238385 | ID=cds.MS.gene30240.t1;Parent=MS.gene30240.t1 |
chr6.2 | exon | 45238978 | 45239920 | 45238978 | ID=MS.gene30240.t1.exon4;Parent=MS.gene30240.t1 |
chr6.2 | CDS | 45238978 | 45239920 | 45238978 | ID=cds.MS.gene30240.t1;Parent=MS.gene30240.t1 |
chr6.2 | exon | 45240309 | 45241096 | 45240309 | ID=MS.gene30240.t1.exon5;Parent=MS.gene30240.t1 |
chr6.2 | CDS | 45240309 | 45241096 | 45240309 | ID=cds.MS.gene30240.t1;Parent=MS.gene30240.t1 |
Gene Sequence |
Protein sequence |