Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30429.t1 | ABD32483.2 | 83.3 | 324 | 52 | 1 | 1 | 322 | 6 | 329 | 9.50E-150 | 539.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30429.t1 | Q8L3W1 | 26.9 | 338 | 195 | 5 | 13 | 305 | 6 | 336 | 1.3e-25 | 118.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30429.t1 | Q2HSK0 | 83.3 | 324 | 52 | 1 | 1 | 322 | 6 | 329 | 6.9e-150 | 539.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30429.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30429.t1 | MTR_7g050710 | 83.333 | 324 | 52 | 1 | 1 | 322 | 1 | 324 | 0.0 | 554 |
| MS.gene30429.t1 | MTR_3g098790 | 71.429 | 322 | 86 | 1 | 1 | 322 | 1 | 316 | 1.73e-165 | 464 |
| MS.gene30429.t1 | MTR_7g050580 | 72.642 | 318 | 72 | 3 | 1 | 318 | 1 | 303 | 1.07e-155 | 438 |
| MS.gene30429.t1 | MTR_7g050590 | 73.579 | 299 | 73 | 5 | 28 | 322 | 1 | 297 | 1.08e-152 | 430 |
| MS.gene30429.t1 | MTR_7g050560 | 68.966 | 319 | 82 | 4 | 1 | 318 | 1 | 303 | 4.10e-149 | 422 |
| MS.gene30429.t1 | MTR_7g050720 | 59.236 | 314 | 115 | 7 | 7 | 307 | 4 | 317 | 9.04e-116 | 337 |
| MS.gene30429.t1 | MTR_8g103940 | 37.380 | 313 | 160 | 8 | 11 | 305 | 37 | 331 | 1.26e-54 | 186 |
| MS.gene30429.t1 | MTR_1g108780 | 35.906 | 298 | 163 | 7 | 21 | 305 | 8 | 290 | 6.71e-49 | 170 |
| MS.gene30429.t1 | MTR_1g035460 | 34.615 | 312 | 145 | 9 | 28 | 305 | 1 | 287 | 1.15e-45 | 159 |
| MS.gene30429.t1 | MTR_7g050640 | 66.038 | 106 | 36 | 0 | 1 | 106 | 1 | 106 | 8.28e-44 | 146 |
| MS.gene30429.t1 | MTR_5g044670 | 33.333 | 315 | 185 | 9 | 13 | 318 | 16 | 314 | 3.89e-43 | 151 |
| MS.gene30429.t1 | MTR_3g061370 | 33.548 | 310 | 167 | 11 | 5 | 304 | 1 | 281 | 1.23e-41 | 146 |
| MS.gene30429.t1 | MTR_3g061350 | 33.654 | 312 | 171 | 12 | 1 | 304 | 1 | 284 | 4.95e-40 | 142 |
| MS.gene30429.t1 | MTR_3g061320 | 32.131 | 305 | 163 | 11 | 10 | 304 | 9 | 279 | 5.95e-40 | 141 |
| MS.gene30429.t1 | MTR_3g061310 | 31.126 | 302 | 176 | 10 | 10 | 304 | 9 | 285 | 6.34e-39 | 139 |
| MS.gene30429.t1 | MTR_3g061340 | 31.818 | 308 | 155 | 10 | 10 | 304 | 9 | 274 | 7.71e-39 | 139 |
| MS.gene30429.t1 | MTR_6g043890 | 33.898 | 295 | 165 | 10 | 11 | 291 | 13 | 291 | 2.72e-34 | 128 |
| MS.gene30429.t1 | MTR_3g061290 | 56.311 | 103 | 43 | 1 | 10 | 112 | 9 | 109 | 4.56e-34 | 124 |
| MS.gene30429.t1 | MTR_3g061330 | 54.369 | 103 | 45 | 1 | 10 | 112 | 9 | 109 | 2.43e-33 | 123 |
| MS.gene30429.t1 | MTR_1g035620 | 30.508 | 295 | 181 | 7 | 10 | 303 | 6 | 277 | 5.64e-33 | 126 |
| MS.gene30429.t1 | MTR_1g035640 | 32.258 | 310 | 175 | 10 | 13 | 315 | 9 | 290 | 1.13e-32 | 126 |
| MS.gene30429.t1 | MTR_1g050845 | 32.787 | 305 | 149 | 11 | 10 | 303 | 6 | 265 | 1.59e-30 | 122 |
| MS.gene30429.t1 | MTR_4g119990 | 31.475 | 305 | 192 | 9 | 11 | 304 | 13 | 311 | 2.88e-30 | 118 |
| MS.gene30429.t1 | MTR_3g005480 | 26.837 | 313 | 158 | 7 | 5 | 308 | 13 | 263 | 7.99e-29 | 112 |
| MS.gene30429.t1 | MTR_3g005490 | 25.574 | 305 | 157 | 5 | 12 | 308 | 20 | 262 | 8.23e-29 | 112 |
| MS.gene30429.t1 | MTR_5g070440 | 26.885 | 305 | 162 | 7 | 12 | 308 | 20 | 271 | 2.50e-27 | 108 |
| MS.gene30429.t1 | MTR_1g035570 | 30.392 | 306 | 173 | 9 | 13 | 305 | 9 | 287 | 7.23e-27 | 109 |
| MS.gene30429.t1 | MTR_6g061070 | 30.094 | 319 | 195 | 11 | 6 | 304 | 11 | 321 | 1.83e-26 | 109 |
| MS.gene30429.t1 | MTR_3g005420 | 28.525 | 305 | 171 | 10 | 4 | 308 | 282 | 539 | 2.19e-25 | 106 |
| MS.gene30429.t1 | MTR_3g005420 | 24.382 | 283 | 144 | 8 | 12 | 292 | 39 | 253 | 3.23e-15 | 76.6 |
| MS.gene30429.t1 | MTR_1g021400 | 26.331 | 338 | 189 | 9 | 11 | 304 | 28 | 349 | 2.81e-25 | 104 |
| MS.gene30429.t1 | MTR_1g021360 | 28.523 | 298 | 188 | 7 | 12 | 297 | 178 | 462 | 3.05e-25 | 105 |
| MS.gene30429.t1 | MTR_1g021360 | 26.923 | 286 | 156 | 8 | 12 | 290 | 20 | 259 | 4.67e-15 | 75.9 |
| MS.gene30429.t1 | MTR_3g061220 | 45.631 | 103 | 41 | 2 | 10 | 112 | 9 | 96 | 3.45e-23 | 92.8 |
| MS.gene30429.t1 | MTR_1g021330 | 25.301 | 332 | 200 | 5 | 11 | 297 | 24 | 352 | 7.07e-23 | 98.2 |
| MS.gene30429.t1 | MTR_3g005460 | 26.299 | 308 | 170 | 10 | 11 | 308 | 260 | 520 | 1.14e-22 | 98.6 |
| MS.gene30429.t1 | MTR_3g005460 | 31.967 | 122 | 79 | 1 | 6 | 127 | 18 | 135 | 2.27e-16 | 80.1 |
| MS.gene30429.t1 | MTR_1g021410 | 23.964 | 338 | 197 | 8 | 11 | 304 | 21 | 342 | 3.66e-22 | 95.9 |
| MS.gene30429.t1 | MTR_1g021270 | 26.197 | 355 | 206 | 10 | 8 | 314 | 11 | 357 | 4.95e-21 | 94.0 |
| MS.gene30429.t1 | MTR_1g021380 | 24.138 | 319 | 206 | 8 | 11 | 304 | 20 | 327 | 1.88e-20 | 90.9 |
| MS.gene30429.t1 | MTR_1g035650 | 33.180 | 217 | 120 | 8 | 10 | 220 | 6 | 203 | 2.72e-20 | 87.8 |
| MS.gene30429.t1 | MTR_1g034240 | 40.404 | 99 | 59 | 0 | 13 | 111 | 7 | 105 | 8.30e-20 | 89.7 |
| MS.gene30429.t1 | MTR_1g034240 | 32.090 | 134 | 85 | 2 | 178 | 311 | 271 | 398 | 1.06e-14 | 74.7 |
| MS.gene30429.t1 | MTR_4g068320 | 38.384 | 99 | 61 | 0 | 13 | 111 | 6 | 104 | 2.32e-19 | 88.6 |
| MS.gene30429.t1 | MTR_4g068320 | 33.083 | 133 | 83 | 2 | 178 | 310 | 267 | 393 | 5.76e-15 | 75.5 |
| MS.gene30429.t1 | MTR_3g005495 | 27.986 | 293 | 148 | 9 | 4 | 296 | 236 | 465 | 6.16e-19 | 87.4 |
| MS.gene30429.t1 | MTR_3g005495 | 32.323 | 99 | 63 | 1 | 29 | 127 | 29 | 123 | 1.21e-14 | 74.7 |
| MS.gene30429.t1 | MTR_1g035480 | 40.517 | 116 | 66 | 2 | 8 | 123 | 12 | 124 | 1.28e-18 | 82.4 |
| MS.gene30429.t1 | MTR_1g021435 | 25.000 | 344 | 196 | 8 | 11 | 303 | 20 | 352 | 1.96e-18 | 85.5 |
| MS.gene30429.t1 | MTR_1g035520 | 28.664 | 307 | 177 | 11 | 28 | 303 | 87 | 382 | 1.20e-17 | 83.2 |
| MS.gene30429.t1 | MTR_1g035500 | 37.288 | 118 | 71 | 2 | 6 | 123 | 18 | 132 | 8.57e-17 | 77.4 |
| MS.gene30429.t1 | MTR_1g034210 | 37.255 | 102 | 64 | 0 | 13 | 114 | 7 | 108 | 2.16e-16 | 79.0 |
| MS.gene30429.t1 | MTR_1g035440 | 40.000 | 105 | 62 | 1 | 11 | 114 | 13 | 117 | 2.80e-16 | 77.4 |
| MS.gene30429.t1 | MTR_1g034210 | 37.255 | 102 | 64 | 0 | 13 | 114 | 7 | 108 | 3.74e-16 | 78.6 |
| MS.gene30429.t1 | MTR_1g033740 | 36.441 | 118 | 72 | 2 | 6 | 123 | 15 | 129 | 7.98e-16 | 75.1 |
| MS.gene30429.t1 | MTR_3g005440 | 29.167 | 144 | 97 | 2 | 27 | 168 | 34 | 174 | 2.12e-15 | 77.0 |
| MS.gene30429.t1 | MTR_3g005440 | 32.203 | 118 | 80 | 0 | 12 | 129 | 241 | 358 | 1.28e-13 | 71.6 |
| MS.gene30429.t1 | MTR_1g021350 | 27.331 | 311 | 187 | 11 | 11 | 297 | 20 | 315 | 3.69e-15 | 75.5 |
| MS.gene30429.t1 | MTR_3g005420 | 24.382 | 283 | 144 | 8 | 12 | 292 | 20 | 234 | 3.89e-15 | 76.3 |
| MS.gene30429.t1 | MTR_1g021320 | 36.957 | 92 | 58 | 0 | 11 | 102 | 23 | 114 | 1.92e-14 | 74.3 |
| MS.gene30429.t1 | MTR_1g021320 | 35.922 | 103 | 63 | 3 | 11 | 112 | 182 | 282 | 4.56e-12 | 67.4 |
| MS.gene30429.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 11 | 102 | 21 | 111 | 2.28e-14 | 72.4 |
| MS.gene30429.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 11 | 102 | 21 | 111 | 2.56e-14 | 72.8 |
| MS.gene30429.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 11 | 102 | 21 | 111 | 5.00e-14 | 72.4 |
| MS.gene30429.t1 | MTR_1g035510 | 28.340 | 247 | 127 | 11 | 28 | 252 | 1 | 219 | 5.14e-14 | 70.5 |
| MS.gene30429.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 11 | 102 | 21 | 111 | 5.24e-14 | 72.4 |
| MS.gene30429.t1 | MTR_1g021290 | 29.508 | 122 | 81 | 2 | 9 | 127 | 153 | 272 | 1.15e-12 | 68.2 |
| MS.gene30429.t1 | MTR_1g021290 | 28.689 | 122 | 77 | 3 | 14 | 132 | 28 | 142 | 3.88e-11 | 63.5 |
| MS.gene30429.t1 | MTR_1g035490 | 37.500 | 120 | 68 | 4 | 188 | 305 | 82 | 196 | 3.66e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30429.t1 | AT3G18990 | 26.979 | 341 | 197 | 5 | 13 | 308 | 6 | 339 | 4.14e-33 | 125 |
| MS.gene30429.t1 | AT3G18990 | 26.923 | 338 | 195 | 5 | 13 | 305 | 6 | 336 | 5.51e-33 | 125 |
| MS.gene30429.t1 | AT4G33280 | 29.483 | 329 | 185 | 14 | 12 | 313 | 19 | 327 | 5.95e-24 | 100 |
| MS.gene30429.t1 | AT1G49475 | 43.564 | 101 | 56 | 1 | 13 | 113 | 34 | 133 | 1.02e-21 | 91.3 |
| MS.gene30429.t1 | AT4G01580 | 41.346 | 104 | 61 | 0 | 13 | 116 | 30 | 133 | 1.56e-21 | 90.5 |
| MS.gene30429.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.22e-20 | 87.8 |
| MS.gene30429.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.50e-20 | 87.8 |
| MS.gene30429.t1 | AT3G18960 | 43.182 | 88 | 50 | 0 | 29 | 116 | 9 | 96 | 3.12e-17 | 78.6 |
| MS.gene30429.t1 | AT4G33280 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 1.74e-13 | 70.1 |
| MS.gene30429.t1 | AT4G33280 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 3.23e-13 | 70.1 |
| MS.gene30429.t1 | AT3G53310 | 32.353 | 102 | 67 | 2 | 3 | 104 | 2 | 101 | 4.93e-12 | 65.9 |
Find 56 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATGGAAATTAAATT+TGG | 0.157556 | 7.3:+53642181 | MS.gene30429:CDS |
| AAAGATTTGTACCTCAAATT+TGG | 0.180864 | 7.3:-53642309 | None:intergenic |
| TTTCACCAACAATGTGAAAT+TGG | 0.216826 | 7.3:+53642470 | MS.gene30429:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.253897 | 7.3:+53642311 | MS.gene30429:CDS |
| GGTTTCCTTGGAGAAGGTTT+TGG | 0.257981 | 7.3:-53639743 | None:intergenic |
| TGCTTCCAATTTCACATTGT+TGG | 0.309809 | 7.3:-53642475 | None:intergenic |
| GTCTTTAGACATATAGCTTT+TGG | 0.314158 | 7.3:-53642149 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.337543 | 7.3:+53642168 | MS.gene30429:CDS |
| GAGAGGAGATATTCAACTTC+AGG | 0.365011 | 7.3:+53643459 | MS.gene30429:CDS |
| AGGTGTTGAATGGGAGAGTT+TGG | 0.366825 | 7.3:+53643479 | MS.gene30429:CDS |
| CGTTGAACACCACTTTCTTC+CGG | 0.401759 | 7.3:+53642929 | MS.gene30429:CDS |
| AAAAGAGTGATGGCAAGATA+TGG | 0.414999 | 7.3:+53642204 | MS.gene30429:CDS |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7.3:+53642325 | MS.gene30429:CDS |
| ATTCAACTTCAGGTGTTGAA+TGG | 0.430462 | 7.3:+53643469 | MS.gene30429:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7.3:+53642106 | MS.gene30429:intron |
| GGTCTGCTAGGTATTCTATC+AGG | 0.438342 | 7.3:+53643500 | MS.gene30429:CDS |
| TCCATCCTTTGTTGTTGTCA+TGG | 0.443657 | 7.3:+53642896 | MS.gene30429:CDS |
| CCATCCTTTGTTGTTGTCAT+GGG | 0.446533 | 7.3:+53642897 | MS.gene30429:CDS |
| TTCAACTTCAGGTGTTGAAT+GGG | 0.455910 | 7.3:+53643470 | MS.gene30429:CDS |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7.3:+53642219 | MS.gene30429:CDS |
| TCTATCAGGATGTGCGCTAA+AGG | 0.492186 | 7.3:+53643514 | MS.gene30429:CDS |
| AAAGGCGTACAAGGTTTCCT+TGG | 0.496563 | 7.3:-53639755 | None:intergenic |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7.3:+53643577 | MS.gene30429:CDS |
| AGGTTTATTTCCTTGACCAT+TGG | 0.505200 | 7.3:-53642390 | None:intergenic |
| ATGGGAGAGTTTGGTCTGCT+AGG | 0.505527 | 7.3:+53643488 | MS.gene30429:CDS |
| ATTGTTTAACATTTCAGAGT+AGG | 0.512018 | 7.3:+53643686 | MS.gene30429:CDS |
| ATATGTCTAAAGACTCCAAA+TGG | 0.517821 | 7.3:+53642158 | MS.gene30429:CDS |
| ACATTGTTGGTGAAATTCAA+AGG | 0.523282 | 7.3:-53642462 | None:intergenic |
| TTTGCAGAGCATCACTCTCT+AGG | 0.527747 | 7.3:+53642248 | MS.gene30429:CDS |
| GTACAAGGTTTCCTTGGAGA+AGG | 0.535514 | 7.3:-53639749 | None:intergenic |
| TTAAATTTGGAAAAGAGTGA+TGG | 0.536531 | 7.3:+53642194 | MS.gene30429:CDS |
| CAAAAGAGTTGAAGCTCGGA+AGG | 0.537314 | 7.3:+53642364 | MS.gene30429:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7.3:-53643641 | None:intergenic |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7.3:+53642214 | MS.gene30429:CDS |
| AAAACATGGAAAGTCGCAAA+AGG | 0.558949 | 7.3:+53642508 | MS.gene30429:CDS |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7.3:+53643538 | MS.gene30429:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7.3:+53643546 | MS.gene30429:CDS |
| CCCATGACAACAACAAAGGA+TGG | 0.571041 | 7.3:-53642897 | None:intergenic |
| CTATCAAAAGAGTTGAAGCT+CGG | 0.573122 | 7.3:+53642360 | MS.gene30429:CDS |
| CGGAAGGTCTCCAATGGTCA+AGG | 0.579416 | 7.3:+53642380 | MS.gene30429:CDS |
| TGCAGCTTACCGGAAGAAAG+TGG | 0.589285 | 7.3:-53642938 | None:intergenic |
| GAGCATCACTCTCTAGGTCA+TGG | 0.595626 | 7.3:+53642254 | MS.gene30429:CDS |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7.3:+53643542 | MS.gene30429:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7.3:+53643442 | MS.gene30429:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7.3:+53642215 | MS.gene30429:CDS |
| ACATGGAAAGTCGCAAAAGG+TGG | 0.608889 | 7.3:+53642511 | MS.gene30429:CDS |
| AGCATTAGTTGTGTAAAACA+TGG | 0.615182 | 7.3:+53642494 | MS.gene30429:CDS |
| GAAGCTCGGAAGGTCTCCAA+TGG | 0.627258 | 7.3:+53642374 | MS.gene30429:CDS |
| CTTACCCAAAACCTTCTCCA+AGG | 0.638528 | 7.3:+53639738 | MS.gene30429:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7.3:+53643558 | MS.gene30429:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7.3:-53643418 | None:intergenic |
| CAAATTGATAGAATGTCCAA+AGG | 0.647085 | 7.3:+53642542 | MS.gene30429:CDS |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7.3:-53643422 | None:intergenic |
| CAAGGAAATAAACCTCCGAA+TGG | 0.648381 | 7.3:+53642398 | MS.gene30429:CDS |
| TGCACCCATGACAACAACAA+AGG | 0.693553 | 7.3:-53642901 | None:intergenic |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7.3:+53639686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTAACATTTTTATTTTC+TGG | + | chr7.3:53642648-53642667 | MS.gene30429:intron | 10.0% |
| !! | AAAAGAAAATTAATATGTCA+TGG | - | chr7.3:53639972-53639991 | None:intergenic | 15.0% |
| !! | AGTTATATCATTCATATTAA+TGG | + | chr7.3:53642068-53642087 | MS.gene30429:intron | 15.0% |
| !! | ATGAATGAAAAAAAAAACAA+GGG | - | chr7.3:53643363-53643382 | None:intergenic | 15.0% |
| !! | CAATAAATAAATAACAGTAA+AGG | - | chr7.3:53639776-53639795 | None:intergenic | 15.0% |
| !! | TCAAAAAATGCATAAAAATA+AGG | - | chr7.3:53640164-53640183 | None:intergenic | 15.0% |
| !! | TTAGAATAACTTTAATTAGT+TGG | + | chr7.3:53642721-53642740 | MS.gene30429:intron | 15.0% |
| !!! | AAATGTTTTTAGTTTTTTAG+GGG | - | chr7.3:53640505-53640524 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTACATTACTTT+AGG | - | chr7.3:53642046-53642065 | None:intergenic | 15.0% |
| !!! | CAAATGTTTTTAGTTTTTTA+GGG | - | chr7.3:53640506-53640525 | None:intergenic | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7.3:53643341-53643360 | None:intergenic | 15.0% |
| !! | AAAAATTCCAAAAATATCCT+TGG | + | chr7.3:53640286-53640305 | MS.gene30429:intron | 20.0% |
| !! | AATCAATTGTTCTGTAATTT+AGG | - | chr7.3:53640111-53640130 | None:intergenic | 20.0% |
| !! | GATGAATGAAAAAAAAAACA+AGG | - | chr7.3:53643364-53643383 | None:intergenic | 20.0% |
| !! | GGTAAAATTGGAAAAAAATA+GGG | + | chr7.3:53641829-53641848 | MS.gene30429:intron | 20.0% |
| !! | TGAATGAAAAAAAAAACAAG+GGG | - | chr7.3:53643362-53643381 | None:intergenic | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr7.3:53642181-53642200 | MS.gene30429:CDS | 20.0% |
| !! | TGTTTCAAAAAAAAATGTCA+TGG | - | chr7.3:53639941-53639960 | None:intergenic | 20.0% |
| !!! | AAAAACCTTTTTATTGTTGT+TGG | - | chr7.3:53642999-53643018 | None:intergenic | 20.0% |
| !!! | AAACGTTTTTAGTTTTTTAG+AGG | - | chr7.3:53640716-53640735 | None:intergenic | 20.0% |
| !!! | ATATTCATATCGTTTTTGTT+CGG | - | chr7.3:53640575-53640594 | None:intergenic | 20.0% |
| !!! | ATATTTTTGGAATTTTTGCA+GGG | - | chr7.3:53640283-53640302 | None:intergenic | 20.0% |
| !!! | GCAAATGTTTTTAGTTTTTT+AGG | - | chr7.3:53640507-53640526 | None:intergenic | 20.0% |
| ! | AAACATAGAGTTAAACCTAA+TGG | + | chr7.3:53640077-53640096 | MS.gene30429:intron | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | - | chr7.3:53642312-53642331 | None:intergenic | 25.0% |
| ! | AATCAACGACATATCATAAA+TGG | + | chr7.3:53639996-53640015 | MS.gene30429:intron | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | + | chr7.3:53642116-53642135 | MS.gene30429:CDS | 25.0% |
| ! | AGAATACTAACAATACATTC+TGG | + | chr7.3:53641786-53641805 | MS.gene30429:intron | 25.0% |
| ! | ATAAATGCAGTCAAAAAATG+TGG | - | chr7.3:53641125-53641144 | None:intergenic | 25.0% |
| ! | ATCAACGACATATCATAAAT+GGG | + | chr7.3:53639997-53640016 | MS.gene30429:intron | 25.0% |
| ! | ATTGTTTAACATTTCAGAGT+AGG | + | chr7.3:53643686-53643705 | MS.gene30429:CDS | 25.0% |
| ! | GGGTAAAATTGGAAAAAAAT+AGG | + | chr7.3:53641828-53641847 | MS.gene30429:intron | 25.0% |
| ! | GGTTGCTAAAAATTTAAACA+TGG | - | chr7.3:53642758-53642777 | None:intergenic | 25.0% |
| ! | GTTAAAAAGATCATATCTAG+TGG | - | chr7.3:53643023-53643042 | None:intergenic | 25.0% |
| ! | TAAGTATGATCTTGAAAAAG+TGG | - | chr7.3:53639722-53639741 | None:intergenic | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7.3:53643644-53643663 | None:intergenic | 25.0% |
| ! | TCTTGCCAATTTATTCAATT+TGG | + | chr7.3:53641988-53642007 | MS.gene30429:intron | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7.3:53642298-53642317 | MS.gene30429:CDS | 25.0% |
| ! | TGAAGAAAATTGAAGAAAAG+AGG | + | chr7.3:53640735-53640754 | MS.gene30429:intron | 25.0% |
| ! | TTAAATTTGGAAAAGAGTGA+TGG | + | chr7.3:53642194-53642213 | MS.gene30429:CDS | 25.0% |
| ! | TTTGAAGAACATTTCTCTTT+AGG | + | chr7.3:53640179-53640198 | MS.gene30429:intron | 25.0% |
| ! | TTTGTTCGGATTTAAATTTC+CGG | - | chr7.3:53640561-53640580 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | + | chr7.3:53642311-53642330 | MS.gene30429:CDS | 25.0% |
| !! | ACTTGTTTAAGGCTATAAAT+AGG | - | chr7.3:53640798-53640817 | None:intergenic | 25.0% |
| !! | CATTTCCATTTTCTATTGTT+TGG | + | chr7.3:53643386-53643405 | MS.gene30429:intron | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | - | chr7.3:53642116-53642135 | None:intergenic | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | - | chr7.3:53642805-53642824 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | + | chr7.3:53642804-53642823 | MS.gene30429:intron | 25.0% |
| !!! | ACATGATGTTACTTTGTATT+TGG | + | chr7.3:53639828-53639847 | MS.gene30429:intron | 25.0% |
| !!! | ACATTTTTTGACTGCATTTA+TGG | + | chr7.3:53641124-53641143 | MS.gene30429:intron | 25.0% |
| !!! | GATATTTTTGGAATTTTTGC+AGG | - | chr7.3:53640284-53640303 | None:intergenic | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | + | chr7.3:53642659-53642678 | MS.gene30429:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7.3:53643442-53643461 | MS.gene30429:CDS | 25.0% |
| !!! | TTTTAGTTTTTTAGAGGTGT+CGG | - | chr7.3:53640710-53640729 | None:intergenic | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | + | chr7.3:53642658-53642677 | MS.gene30429:intron | 25.0% |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7.3:53643425-53643444 | None:intergenic | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7.3:53643577-53643596 | MS.gene30429:CDS | 30.0% | |
| AAGTAACTAACAATCTGGTT+CGG | - | chr7.3:53640327-53640346 | None:intergenic | 30.0% | |
| AAGTATATTCCGTAAACCAA+AGG | + | chr7.3:53641001-53641020 | MS.gene30429:intron | 30.0% | |
| AATTTATTCAATTTGGCCAG+GGG | + | chr7.3:53641995-53642014 | MS.gene30429:intron | 30.0% | |
| ACTGGATGTATGTTTATTCT+GGG | - | chr7.3:53641900-53641919 | None:intergenic | 30.0% | |
| AGCATTAGTTGTGTAAAACA+TGG | + | chr7.3:53642494-53642513 | MS.gene30429:CDS | 30.0% | |
| AGTAGCCAACAACAATAAAA+AGG | + | chr7.3:53642991-53643010 | MS.gene30429:intron | 30.0% | |
| ATATGTCTAAAGACTCCAAA+TGG | + | chr7.3:53642158-53642177 | MS.gene30429:CDS | 30.0% | |
| ATATTTGACGATAATCTTCG+AGG | - | chr7.3:53642779-53642798 | None:intergenic | 30.0% | |
| ATGATCTTGAAAAAGTGGAT+TGG | - | chr7.3:53639717-53639736 | None:intergenic | 30.0% | |
| ATTGACTGTATTAATGACCT+AGG | - | chr7.3:53640821-53640840 | None:intergenic | 30.0% | |
| CAAATTGATAGAATGTCCAA+AGG | + | chr7.3:53642542-53642561 | MS.gene30429:CDS | 30.0% | |
| CAATTTATTCAATTTGGCCA+GGG | + | chr7.3:53641994-53642013 | MS.gene30429:intron | 30.0% | |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7.3:53642280-53642299 | None:intergenic | 30.0% | |
| CATTATGTAGCTAATTGTCA+CGG | + | chr7.3:53643187-53643206 | MS.gene30429:intron | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7.3:53643538-53643557 | MS.gene30429:CDS | 30.0% | |
| GACATAAAATCGTATACCTT+TGG | - | chr7.3:53642561-53642580 | None:intergenic | 30.0% | |
| GTAATCACTTGTGTCAATAT+CGG | - | chr7.3:53643096-53643115 | None:intergenic | 30.0% | |
| GTATCTTTCTTTGATGTCAA+GGG | + | chr7.3:53640387-53640406 | MS.gene30429:intron | 30.0% | |
| GTTCTGCTAAAATACTATTC+CGG | + | chr7.3:53641739-53641758 | MS.gene30429:intron | 30.0% | |
| TACTGGATGTATGTTTATTC+TGG | - | chr7.3:53641901-53641920 | None:intergenic | 30.0% | |
| TACTTCCGGAAAATAAAATC+CGG | + | chr7.3:53640342-53640361 | MS.gene30429:intron | 30.0% | |
| TAGTATTCTTCAGATGTTTC+CGG | - | chr7.3:53641775-53641794 | None:intergenic | 30.0% | |
| TGAAAGAGAGCCATTAATTT+GGG | - | chr7.3:53640875-53640894 | None:intergenic | 30.0% | |
| TGACAATTAGCTACATAATG+TGG | - | chr7.3:53643187-53643206 | None:intergenic | 30.0% | |
| TGCAGAAAATTGAAGAAAAG+AGG | + | chr7.3:53640524-53640543 | MS.gene30429:intron | 30.0% | |
| TGTATCTTTCTTTGATGTCA+AGG | + | chr7.3:53640386-53640405 | MS.gene30429:intron | 30.0% | |
| TTCTGCCAAACAATAGAAAA+TGG | - | chr7.3:53643394-53643413 | None:intergenic | 30.0% | |
| TTGAAAGAGAGCCATTAATT+TGG | - | chr7.3:53640876-53640895 | None:intergenic | 30.0% | |
| TTTCACCAACAATGTGAAAT+TGG | + | chr7.3:53642470-53642489 | MS.gene30429:CDS | 30.0% | |
| TTTGTGGAAAAATATGGAAG+AGG | + | chr7.3:53642122-53642141 | MS.gene30429:CDS | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr7.3:53642176-53642195 | None:intergenic | 30.0% |
| ! | ACATTGTTGGTGAAATTCAA+AGG | - | chr7.3:53642465-53642484 | None:intergenic | 30.0% |
| ! | GTCTTTAGACATATAGCTTT+TGG | - | chr7.3:53642152-53642171 | None:intergenic | 30.0% |
| ! | TAAGTACCTGATGTGTATTT+TGG | + | chr7.3:53641923-53641942 | MS.gene30429:intron | 30.0% |
| ! | TACATTACTTTAGGAAACAC+TGG | - | chr7.3:53642037-53642056 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7.3:53643325-53643344 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7.3:53643326-53643345 | None:intergenic | 30.0% |
| !!! | CTATTCCGGATTTTAAAATC+CGG | + | chr7.3:53641753-53641772 | MS.gene30429:intron | 30.0% |
| !!! | TGTTTCCGGATTTTAAAATC+CGG | - | chr7.3:53641761-53641780 | None:intergenic | 30.0% |
| !!! | TTTTAGTTTTTTAGGGGTGT+CGG | - | chr7.3:53640499-53640518 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAATTTTACCCC+TGG | - | chr7.3:53641827-53641846 | None:intergenic | 30.0% |
| AAAACATGGAAAGTCGCAAA+AGG | + | chr7.3:53642508-53642527 | MS.gene30429:CDS | 35.0% | |
| AAAAGAGGTGAAGAGATTTC+CGG | + | chr7.3:53640539-53640558 | MS.gene30429:intron | 35.0% | |
| AAAAGAGGTGAAGTGAAGAA+TGG | + | chr7.3:53640750-53640769 | MS.gene30429:intron | 35.0% | |
| AAAAGAGTGATGGCAAGATA+TGG | + | chr7.3:53642204-53642223 | MS.gene30429:CDS | 35.0% | |
| AATAGCATTTCAGCTTGTGT+GGG | - | chr7.3:53640436-53640455 | None:intergenic | 35.0% | |
| AATGTTTCTTTGCAGCTTAC+CGG | - | chr7.3:53642951-53642970 | None:intergenic | 35.0% | |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7.3:53643542-53643561 | MS.gene30429:CDS | 35.0% | |
| ACCAGATTGTTAGTTACTTC+CGG | + | chr7.3:53640328-53640347 | MS.gene30429:intron | 35.0% | |
| ACTGTCCAAACCCAAATTAA+TGG | + | chr7.3:53640862-53640881 | MS.gene30429:intron | 35.0% | |
| ACTTTCAGGGTTTGTATGAA+CGG | + | chr7.3:53641292-53641311 | MS.gene30429:intron | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7.3:53642393-53642412 | None:intergenic | 35.0% | |
| AGTCAATGAAAACGTGTTAG+TGG | + | chr7.3:53640834-53640853 | MS.gene30429:intron | 35.0% | |
| CCAATTTATTCAATTTGGCC+AGG | + | chr7.3:53641993-53642012 | MS.gene30429:intron | 35.0% | |
| CCTGGCCAAATTGAATAAAT+TGG | - | chr7.3:53641996-53642015 | None:intergenic | 35.0% | |
| CCTTATGATGGCATGATAAA+AGG | + | chr7.3:53639901-53639920 | MS.gene30429:intron | 35.0% | |
| CTATCAAAAGAGTTGAAGCT+CGG | + | chr7.3:53642360-53642379 | MS.gene30429:CDS | 35.0% | |
| CTTGTGTGAGGTTCATATAA+CGG | - | chr7.3:53640634-53640653 | None:intergenic | 35.0% | |
| GCTCTTAGGAGATTAGAATT+AGG | + | chr7.3:53641533-53641552 | MS.gene30429:intron | 35.0% | |
| GGTTTACGGAATATACTTTC+CGG | - | chr7.3:53640999-53641018 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | + | chr7.3:53642951-53642970 | MS.gene30429:intron | 35.0% | |
| GTGTCTTTCTTTGATGTCAA+GGG | + | chr7.3:53640598-53640617 | MS.gene30429:intron | 35.0% | |
| TATCTATGAAAGGCCAATGA+TGG | - | chr7.3:53641257-53641276 | None:intergenic | 35.0% | |
| TATGTCTTCTTCATTGTGTC+AGG | + | chr7.3:53642575-53642594 | MS.gene30429:intron | 35.0% | |
| TATTGCAGGGTTCATATGAA+AGG | + | chr7.3:53640452-53640471 | MS.gene30429:intron | 35.0% | |
| TCACCATTATCGCATTAATC+CGG | + | chr7.3:53640977-53640996 | MS.gene30429:intron | 35.0% | |
| TGCTTCCAATTTCACATTGT+TGG | - | chr7.3:53642478-53642497 | None:intergenic | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7.3:53643421-53643440 | None:intergenic | 35.0% | |
| TGTGTCTTTCTTTGATGTCA+AGG | + | chr7.3:53640597-53640616 | MS.gene30429:intron | 35.0% | |
| TTCCAAAAATATCCTTGGTC+CGG | + | chr7.3:53640291-53640310 | MS.gene30429:intron | 35.0% | |
| TTTCCGGATTAATGCGATAA+TGG | - | chr7.3:53640983-53641002 | None:intergenic | 35.0% | |
| ! | AATAACAGTAAAGGCGTACA+AGG | - | chr7.3:53639767-53639786 | None:intergenic | 35.0% |
| ! | AATGACCTAGGACTTGTTTA+AGG | - | chr7.3:53640809-53640828 | None:intergenic | 35.0% |
| ! | ACAAAAAAGTGCACAACATC+TGG | - | chr7.3:53640369-53640388 | None:intergenic | 35.0% |
| ! | ACATTCTGGAAAACGAAATC+CGG | + | chr7.3:53641800-53641819 | MS.gene30429:intron | 35.0% |
| ! | CCTTTTATCATGCCATCATA+AGG | - | chr7.3:53639904-53639923 | None:intergenic | 35.0% |
| ! | TATAGCCTTAAACAAGTCCT+AGG | + | chr7.3:53640801-53640820 | MS.gene30429:intron | 35.0% |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | + | chr7.3:53642325-53642344 | MS.gene30429:CDS | 35.0% |
| !! | ATGGAGGTATTTGTTGAAGA+TGG | + | chr7.3:53640769-53640788 | MS.gene30429:intron | 35.0% |
| !! | ATTCAACTTCAGGTGTTGAA+TGG | + | chr7.3:53643469-53643488 | MS.gene30429:CDS | 35.0% |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7.3:53642817-53642836 | None:intergenic | 35.0% |
| !! | CATTGGCCTTTCATAGATAA+GGG | + | chr7.3:53641258-53641277 | MS.gene30429:intron | 35.0% |
| !! | GGTTTGGAAGGGTATTTATA+GGG | - | chr7.3:53641177-53641196 | None:intergenic | 35.0% |
| !! | TCATTGGCCTTTCATAGATA+AGG | + | chr7.3:53641257-53641276 | MS.gene30429:intron | 35.0% |
| !! | TTCAACTTCAGGTGTTGAAT+GGG | + | chr7.3:53643470-53643489 | MS.gene30429:CDS | 35.0% |
| AACCACTGTCAAAAACGTGT+GGG | - | chr7.3:53641081-53641100 | None:intergenic | 40.0% | |
| AAGACTCAGATGACAAGGTA+AGG | - | chr7.3:53640031-53640050 | None:intergenic | 40.0% | |
| AATGCTATTGCAGGGTTCAT+AGG | + | chr7.3:53640447-53640466 | MS.gene30429:intron | 40.0% | |
| ACAAGCTGAAATGCTATTGC+AGG | + | chr7.3:53640438-53640457 | MS.gene30429:intron | 40.0% | |
| ACTTGTGTCAATATCGGACA+CGG | - | chr7.3:53643090-53643109 | None:intergenic | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr7.3:53642168-53642187 | MS.gene30429:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7.3:53642219-53642238 | MS.gene30429:CDS | 40.0% | |
| AGCCTAAAACACACCAGTTT+GGG | - | chr7.3:53641959-53641978 | None:intergenic | 40.0% | |
| AGGGTGGAAAAAGTAAATCC+CGG | - | chr7.3:53640244-53640263 | None:intergenic | 40.0% | |
| ATAGCATTTCAGCTTGTGTG+AGG | - | chr7.3:53640435-53640454 | None:intergenic | 40.0% | |
| ATAGCATTTCAGCTTGTGTG+GGG | - | chr7.3:53640435-53640454 | None:intergenic | 40.0% | |
| ATCCCGGAGTTATCTGTATT+AGG | - | chr7.3:53640228-53640247 | None:intergenic | 40.0% | |
| ATGGTTGTAGAAGGAAGAAG+AGG | - | chr7.3:53641228-53641247 | None:intergenic | 40.0% | |
| CAAGCTGAAATGCTATTGCA+GGG | + | chr7.3:53640439-53640458 | MS.gene30429:intron | 40.0% | |
| CAAGGAAATAAACCTCCGAA+TGG | + | chr7.3:53642398-53642417 | MS.gene30429:CDS | 40.0% | |
| CAATAGCATTTCAGCTTGTG+TGG | - | chr7.3:53640437-53640456 | None:intergenic | 40.0% | |
| CACATCAGGTACTTATCTAC+TGG | - | chr7.3:53641918-53641937 | None:intergenic | 40.0% | |
| CTTGGCTATTGGAGGAAAAT+CGG | - | chr7.3:53641479-53641498 | None:intergenic | 40.0% | |
| CTTGTGTGGGGTTCATATAA+CGG | - | chr7.3:53640423-53640442 | None:intergenic | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7.3:53643459-53643478 | MS.gene30429:CDS | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7.3:53642106-53642125 | MS.gene30429:intron | 40.0% | |
| GCAATGCCAAAATACACATC+AGG | - | chr7.3:53641932-53641951 | None:intergenic | 40.0% | |
| GCATTCCGGAATATACAATC+CGG | - | chr7.3:53641033-53641052 | None:intergenic | 40.0% | |
| GCATTCCGGATTGTATATTC+CGG | + | chr7.3:53641025-53641044 | MS.gene30429:intron | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7.3:53642215-53642234 | MS.gene30429:CDS | 40.0% | |
| GTTGAAAGACTCAGATGACA+AGG | - | chr7.3:53640036-53640055 | None:intergenic | 40.0% | |
| GTTTGTATGAACGGTCAATG+AGG | + | chr7.3:53641301-53641320 | MS.gene30429:intron | 40.0% | |
| TAAAACACACCAGTTTGGGT+TGG | - | chr7.3:53641955-53641974 | None:intergenic | 40.0% | |
| TAACCACTGTCAAAAACGTG+TGG | - | chr7.3:53641082-53641101 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | - | chr7.3:53641960-53641979 | None:intergenic | 40.0% | |
| TATGTCCTATCACATAGCAG+TGG | + | chr7.3:53641506-53641525 | MS.gene30429:intron | 40.0% | |
| TATTGCAGGGTTCATAGGAA+CGG | + | chr7.3:53640663-53640682 | MS.gene30429:intron | 40.0% | |
| TCCCGGAGTTATCTGTATTA+GGG | - | chr7.3:53640227-53640246 | None:intergenic | 40.0% | |
| TCCGGAAGTAACTAACAATC+TGG | - | chr7.3:53640332-53640351 | None:intergenic | 40.0% | |
| TCTTCTTCCTTCTACAACCA+TGG | + | chr7.3:53641227-53641246 | MS.gene30429:intron | 40.0% | |
| TGGAAAACCATGGTTGTAGA+AGG | - | chr7.3:53641237-53641256 | None:intergenic | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7.3:53642214-53642233 | MS.gene30429:CDS | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+GGG | - | chr7.3:53641954-53641973 | None:intergenic | 40.0% |
| ! | AACCCAAACTGGTGTGTTTT+AGG | + | chr7.3:53641954-53641973 | MS.gene30429:intron | 40.0% |
| ! | AACCCTGAAAGTTTTCAACG+AGG | - | chr7.3:53641284-53641303 | None:intergenic | 40.0% |
| ! | AATGCGATAATGGTGAACGA+GGG | - | chr7.3:53640973-53640992 | None:intergenic | 40.0% |
| ! | ATCCGGACCAAGGATATTTT+TGG | - | chr7.3:53640296-53640315 | None:intergenic | 40.0% |
| ! | ATGCCATCATAAGGTGTTCT+TGG | - | chr7.3:53639895-53639914 | None:intergenic | 40.0% |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | - | chr7.3:53640095-53640114 | None:intergenic | 40.0% |
| ! | CAACCATGGTTTTCCATCAT+TGG | + | chr7.3:53641241-53641260 | MS.gene30429:intron | 40.0% |
| ! | GAGAGCCATTAATTTGGGTT+TGG | - | chr7.3:53640870-53640889 | None:intergenic | 40.0% |
| ! | GCTCTACGATTTTCACCATT+CGG | - | chr7.3:53642416-53642435 | None:intergenic | 40.0% |
| ! | GTTTCCTTGGAGAAGGTTTT+GGG | - | chr7.3:53639745-53639764 | None:intergenic | 40.0% |
| ! | TAATGCGATAATGGTGAACG+AGG | - | chr7.3:53640974-53640993 | None:intergenic | 40.0% |
| ! | TGCCATCATAAGGTGTTCTT+GGG | - | chr7.3:53639894-53639913 | None:intergenic | 40.0% |
| !! | CCATCCTTTGTTGTTGTCAT+GGG | + | chr7.3:53642897-53642916 | MS.gene30429:CDS | 40.0% |
| !! | CTGGTTCGGAAAACAAAATC+CGG | - | chr7.3:53640313-53640332 | None:intergenic | 40.0% |
| !! | GCGTTCTGGATTTTACATTC+CGG | + | chr7.3:53640913-53640932 | MS.gene30429:intron | 40.0% |
| !! | GGGTTTGGAAGGGTATTTAT+AGG | - | chr7.3:53641178-53641197 | None:intergenic | 40.0% |
| !! | TACATAATGTGGCACTGACA+CGG | - | chr7.3:53643176-53643195 | None:intergenic | 40.0% |
| !! | TCCATCCTTTGTTGTTGTCA+TGG | + | chr7.3:53642896-53642915 | MS.gene30429:CDS | 40.0% |
| !! | TGGAAGGGTATTTATAGGGA+GGG | - | chr7.3:53641173-53641192 | None:intergenic | 40.0% |
| !! | TTGGAAGGGTATTTATAGGG+AGG | - | chr7.3:53641174-53641193 | None:intergenic | 40.0% |
| !!! | CTGGTCCGGATTTTATTTTC+CGG | - | chr7.3:53640350-53640369 | None:intergenic | 40.0% |
| !!! | TAGTTTTTTAGAGGTGTCGG+TGG | - | chr7.3:53640707-53640726 | None:intergenic | 40.0% |
| AAAGTGCACAACATCTGGTC+CGG | - | chr7.3:53640364-53640383 | None:intergenic | 45.0% | |
| AATAAGGCCGAGTGAGACAA+CGG | - | chr7.3:53640148-53640167 | None:intergenic | 45.0% | |
| AATCCAGAACGCTTCAGCAT+TGG | - | chr7.3:53640905-53640924 | None:intergenic | 45.0% | |
| ACACGGACATGTCTCTAACA+AGG | - | chr7.3:53643073-53643092 | None:intergenic | 45.0% | |
| ACATGGAAAGTCGCAAAAGG+TGG | + | chr7.3:53642511-53642530 | MS.gene30429:CDS | 45.0% | |
| ACCACTGTCAAAAACGTGTG+GGG | - | chr7.3:53641080-53641099 | None:intergenic | 45.0% | |
| ACGAGGCCCTTATCTATGAA+AGG | - | chr7.3:53641267-53641286 | None:intergenic | 45.0% | |
| AGAAGAAACAAATGCCCCTG+AGG | - | chr7.3:53641431-53641450 | None:intergenic | 45.0% | |
| AGAAGGAAGAAGAGGAAGAG+AGG | - | chr7.3:53641220-53641239 | None:intergenic | 45.0% | |
| AGAGGTGAAGTGAAGAATGG+AGG | + | chr7.3:53640753-53640772 | MS.gene30429:intron | 45.0% | |
| AGGCCCCACAAATATCTCTA+AGG | + | chr7.3:53640199-53640218 | MS.gene30429:intron | 45.0% | |
| ATAGCAGTGGTTAGGCTCTT+AGG | + | chr7.3:53641519-53641538 | MS.gene30429:intron | 45.0% | |
| CAAAAGAGTTGAAGCTCGGA+AGG | + | chr7.3:53642364-53642383 | MS.gene30429:CDS | 45.0% | |
| CATAGCAGTAGCTTGGCTAT+TGG | - | chr7.3:53641490-53641509 | None:intergenic | 45.0% | |
| CCCATGACAACAACAAAGGA+TGG | - | chr7.3:53642900-53642919 | None:intergenic | 45.0% | |
| CCCCCTAATACAGATAACTC+CGG | + | chr7.3:53640222-53640241 | MS.gene30429:intron | 45.0% | |
| CCCCTAATACAGATAACTCC+GGG | + | chr7.3:53640223-53640242 | MS.gene30429:intron | 45.0% | |
| CCCGGAGTTATCTGTATTAG+GGG | - | chr7.3:53640226-53640245 | None:intergenic | 45.0% | |
| CCGGAGTTATCTGTATTAGG+GGG | - | chr7.3:53640225-53640244 | None:intergenic | 45.0% | |
| CCTAACCACTGCTATGTGAT+AGG | - | chr7.3:53641514-53641533 | None:intergenic | 45.0% | |
| CCTATCACATAGCAGTGGTT+AGG | + | chr7.3:53641511-53641530 | MS.gene30429:intron | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | + | chr7.3:53642929-53642948 | MS.gene30429:CDS | 45.0% | |
| CTCAGATGACAAGGTAAGGT+AGG | - | chr7.3:53640027-53640046 | None:intergenic | 45.0% | |
| CTTACCCAAAACCTTCTCCA+AGG | + | chr7.3:53639738-53639757 | MS.gene30429:CDS | 45.0% | |
| GAAAGTTGGCACTTCCTGTA+GGG | - | chr7.3:53640950-53640969 | None:intergenic | 45.0% | |
| GAAGAAACAAATGCCCCTGA+GGG | - | chr7.3:53641430-53641449 | None:intergenic | 45.0% | |
| GAAGGAAGAAGAGGAAGAGA+GGG | - | chr7.3:53641219-53641238 | None:intergenic | 45.0% | |
| GATAGGACATAGCAGTAGCT+TGG | - | chr7.3:53641497-53641516 | None:intergenic | 45.0% | |
| GGAAAACAAAATCCGGACCA+AGG | - | chr7.3:53640306-53640325 | None:intergenic | 45.0% | |
| GGCCTCGTTGAAAACTTTCA+GGG | + | chr7.3:53641279-53641298 | MS.gene30429:intron | 45.0% | |
| GGGCCTTAGAGATATTTGTG+GGG | - | chr7.3:53640205-53640224 | None:intergenic | 45.0% | |
| GGGGCCTTAGAGATATTTGT+GGG | - | chr7.3:53640206-53640225 | None:intergenic | 45.0% | |
| GGTCTGCTAGGTATTCTATC+AGG | + | chr7.3:53643500-53643519 | MS.gene30429:CDS | 45.0% | |
| GTACAAGGTTTCCTTGGAGA+AGG | - | chr7.3:53639752-53639771 | None:intergenic | 45.0% | |
| GTATGAACGGTCAATGAGGA+TGG | + | chr7.3:53641305-53641324 | MS.gene30429:intron | 45.0% | |
| GTCCCAAGAACACCTTATGA+TGG | + | chr7.3:53639889-53639908 | MS.gene30429:intron | 45.0% | |
| TACAATCCGGAATGCACCTT+TGG | - | chr7.3:53641020-53641039 | None:intergenic | 45.0% | |
| TATTGGAGGAAAATCGGAGG+AGG | - | chr7.3:53641473-53641492 | None:intergenic | 45.0% | |
| TCTATCAGGATGTGCGCTAA+AGG | + | chr7.3:53643514-53643533 | MS.gene30429:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7.3:53643546-53643565 | MS.gene30429:CDS | 45.0% | |
| TGCACCCATGACAACAACAA+AGG | - | chr7.3:53642904-53642923 | None:intergenic | 45.0% | |
| ! | AAAGGCGTACAAGGTTTCCT+TGG | - | chr7.3:53639758-53639777 | None:intergenic | 45.0% |
| ! | AATCCAATGCTGAAGCGTTC+TGG | + | chr7.3:53640899-53640918 | MS.gene30429:intron | 45.0% |
| ! | AGAAATGGTGGGGTTTGGAA+GGG | - | chr7.3:53641188-53641207 | None:intergenic | 45.0% |
| ! | AGGCCAATGATGGAAAACCA+TGG | - | chr7.3:53641247-53641266 | None:intergenic | 45.0% |
| ! | ATGCGATAATGGTGAACGAG+GGG | - | chr7.3:53640972-53640991 | None:intergenic | 45.0% |
| ! | CGGAATGCACCTTTGGTTTA+CGG | - | chr7.3:53641013-53641032 | None:intergenic | 45.0% |
| ! | CGTAAACCAAAGGTGCATTC+CGG | + | chr7.3:53641011-53641030 | MS.gene30429:intron | 45.0% |
| ! | CTACGATTTTCACCATTCGG+AGG | - | chr7.3:53642413-53642432 | None:intergenic | 45.0% |
| ! | GGTTTCCTTGGAGAAGGTTT+TGG | - | chr7.3:53639746-53639765 | None:intergenic | 45.0% |
| ! | TTCCAATTTTACCCCTGGTC+CGG | - | chr7.3:53641822-53641841 | None:intergenic | 45.0% |
| ! | TTTGCAGAGCATCACTCTCT+AGG | + | chr7.3:53642248-53642267 | MS.gene30429:CDS | 45.0% |
| !! | AGGTGTTGAATGGGAGAGTT+TGG | + | chr7.3:53643479-53643498 | MS.gene30429:CDS | 45.0% |
| !! | GGAAGGGTATTTATAGGGAG+GGG | - | chr7.3:53641172-53641191 | None:intergenic | 45.0% |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7.3:53643558-53643577 | MS.gene30429:CDS | 45.0% |
| !!! | TAGTTTTTTAGGGGTGTCGG+TGG | - | chr7.3:53640496-53640515 | None:intergenic | 45.0% |
| !! | TTAATTAATTGAAATATTAT+AGG | + | chr7.3:53643260-53643279 | MS.gene30429:intron | 5.0% |
| AGCAGTAGCTTGGCTATTGG+AGG | - | chr7.3:53641487-53641506 | None:intergenic | 50.0% | |
| AGGGATGGTGTGAGAAATGG+TGG | - | chr7.3:53641200-53641219 | None:intergenic | 50.0% | |
| AGGGGTGGGTGAAAAATGGT+TGG | - | chr7.3:53641154-53641173 | None:intergenic | 50.0% | |
| ATAAGGCCGAGTGAGACAAC+GGG | - | chr7.3:53640147-53640166 | None:intergenic | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | + | chr7.3:53641817-53641836 | MS.gene30429:intron | 50.0% | |
| ATGGGAGAGTTTGGTCTGCT+AGG | + | chr7.3:53643488-53643507 | MS.gene30429:CDS | 50.0% | |
| ATGGTGAACGAGGGGAAAGT+TGG | - | chr7.3:53640964-53640983 | None:intergenic | 50.0% | |
| CTGTAGGGCTAAGGACATTC+CGG | - | chr7.3:53640935-53640954 | None:intergenic | 50.0% | |
| GAAAACGAAATCCGGACCAG+GGG | + | chr7.3:53641808-53641827 | MS.gene30429:intron | 50.0% | |
| GAAGAAGAGGAAGAGAGGGA+TGG | - | chr7.3:53641215-53641234 | None:intergenic | 50.0% | |
| GAGAGGGATGGTGTGAGAAA+TGG | - | chr7.3:53641203-53641222 | None:intergenic | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | + | chr7.3:53642254-53642273 | MS.gene30429:CDS | 50.0% | |
| GCCATGACACTGATGCATTC+CGG | - | chr7.3:53641047-53641066 | None:intergenic | 50.0% | |
| GGAAAACGAAATCCGGACCA+GGG | + | chr7.3:53641807-53641826 | MS.gene30429:intron | 50.0% | |
| GGAAAGTTGGCACTTCCTGT+AGG | - | chr7.3:53640951-53640970 | None:intergenic | 50.0% | |
| GGATGGTGTGAGAAATGGTG+GGG | - | chr7.3:53641198-53641217 | None:intergenic | 50.0% | |
| GGCTATTGGAGGAAAATCGG+AGG | - | chr7.3:53641476-53641495 | None:intergenic | 50.0% | |
| GGGATGGTGTGAGAAATGGT+GGG | - | chr7.3:53641199-53641218 | None:intergenic | 50.0% | |
| GGGCCTCGTTGAAAACTTTC+AGG | + | chr7.3:53641278-53641297 | MS.gene30429:intron | 50.0% | |
| GGGGGCCTTAGAGATATTTG+TGG | - | chr7.3:53640207-53640226 | None:intergenic | 50.0% | |
| GGGGTGGGTGAAAAATGGTT+GGG | - | chr7.3:53641153-53641172 | None:intergenic | 50.0% | |
| GGGTATTTATAGGGAGGGGT+GGG | - | chr7.3:53641168-53641187 | None:intergenic | 50.0% | |
| GGTTCATCTGAGGGTCATGT+GGG | + | chr7.3:53641349-53641368 | MS.gene30429:intron | 50.0% | |
| GTTCTTAGCTTCGCCTGTCT+GGG | + | chr7.3:53641380-53641399 | MS.gene30429:intron | 50.0% | |
| TCCGGAATGCATCAGTGTCA+TGG | + | chr7.3:53641043-53641062 | MS.gene30429:intron | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | - | chr7.3:53642941-53642960 | None:intergenic | 50.0% | |
| TGGAAAACGAAATCCGGACC+AGG | + | chr7.3:53641806-53641825 | MS.gene30429:intron | 50.0% | |
| TTTGGCCAGGGGAATTTGTG+TGG | + | chr7.3:53642006-53642025 | MS.gene30429:intron | 50.0% | |
| ! | AGGGTATTTATAGGGAGGGG+TGG | - | chr7.3:53641169-53641188 | None:intergenic | 50.0% |
| ! | GAGAAATGGTGGGGTTTGGA+AGG | - | chr7.3:53641189-53641208 | None:intergenic | 50.0% |
| ! | GTGTGAGAAATGGTGGGGTT+TGG | - | chr7.3:53641193-53641212 | None:intergenic | 50.0% |
| AAACGTGTGGGGCAGACCAT+CGG | - | chr7.3:53641069-53641088 | None:intergenic | 55.0% | |
| AAATCGGAGGAGGAGGGAAG+AGG | - | chr7.3:53641463-53641482 | None:intergenic | 55.0% | |
| AAATGCCCCTGAGGGATGTG+GGG | - | chr7.3:53641422-53641441 | None:intergenic | 55.0% | |
| AACGAAGGGCGGTTCATCTG+AGG | + | chr7.3:53641339-53641358 | MS.gene30429:intron | 55.0% | |
| ACAAATGCCCCTGAGGGATG+TGG | - | chr7.3:53641424-53641443 | None:intergenic | 55.0% | |
| ACGAAGGGCGGTTCATCTGA+GGG | + | chr7.3:53641340-53641359 | MS.gene30429:intron | 55.0% | |
| AGGGAGGGGTGGGTGAAAAA+TGG | - | chr7.3:53641158-53641177 | None:intergenic | 55.0% | |
| CAAATGCCCCTGAGGGATGT+GGG | - | chr7.3:53641423-53641442 | None:intergenic | 55.0% | |
| CAGCTCCACACAAATTCCCC+TGG | - | chr7.3:53642014-53642033 | None:intergenic | 55.0% | |
| CGCGAGGAAAGACATAGGGT+GGG | + | chr7.3:53641854-53641873 | MS.gene30429:intron | 55.0% | |
| CGGAAGGTCTCCAATGGTCA+AGG | + | chr7.3:53642380-53642399 | MS.gene30429:CDS | 55.0% | |
| CGGAATGTCCTTAGCCCTAC+AGG | + | chr7.3:53640933-53640952 | MS.gene30429:intron | 55.0% | |
| CGGTTCATCTGAGGGTCATG+TGG | + | chr7.3:53641348-53641367 | MS.gene30429:intron | 55.0% | |
| GAAGCTCGGAAGGTCTCCAA+TGG | + | chr7.3:53642374-53642393 | MS.gene30429:CDS | 55.0% | |
| GGAAAAAAATAGGGCGCGCG+AGG | + | chr7.3:53641838-53641857 | MS.gene30429:intron | 55.0% | |
| GGAGGAAAATCGGAGGAGGA+GGG | - | chr7.3:53641469-53641488 | None:intergenic | 55.0% | |
| GGTTCTTAGCTTCGCCTGTC+TGG | + | chr7.3:53641379-53641398 | MS.gene30429:intron | 55.0% | |
| GTCCATCCCGTTGTCTCACT+CGG | + | chr7.3:53640138-53640157 | MS.gene30429:intron | 55.0% | |
| TGCATCAGTGTCATGGCCGA+TGG | + | chr7.3:53641050-53641069 | MS.gene30429:intron | 55.0% | |
| TGGAGGAAAATCGGAGGAGG+AGG | - | chr7.3:53641470-53641489 | None:intergenic | 55.0% | |
| TGGCACTTCCTGTAGGGCTA+AGG | - | chr7.3:53640944-53640963 | None:intergenic | 55.0% | |
| TGGCATTGCCCAACCCAAAC+TGG | + | chr7.3:53641943-53641962 | MS.gene30429:intron | 55.0% | |
| ! | GCCCCACACGTTTTTGACAG+TGG | + | chr7.3:53641076-53641095 | MS.gene30429:intron | 55.0% |
| ! | TTTTTGCAGGGCGCACGAGA+AGG | - | chr7.3:53640271-53640290 | None:intergenic | 55.0% |
| !! | TAGAGGTGTCGGTGGTGTCA+TGG | - | chr7.3:53640699-53640718 | None:intergenic | 55.0% |
| AATGCCCCTGAGGGATGTGG+GGG | - | chr7.3:53641421-53641440 | None:intergenic | 60.0% | |
| ATGGAACCGCGCTGCAACGA+AGG | + | chr7.3:53641324-53641343 | MS.gene30429:intron | 60.0% | |
| GAGGGTCATGTGGGTCAGTG+TGG | + | chr7.3:53641358-53641377 | MS.gene30429:intron | 60.0% | |
| GCGCGAGGAAAGACATAGGG+TGG | + | chr7.3:53641853-53641872 | MS.gene30429:intron | 60.0% | |
| GCTCAGACTTACGCCCAGAC+AGG | - | chr7.3:53641396-53641415 | None:intergenic | 60.0% | |
| GGCGCGCGAGGAAAGACATA+GGG | + | chr7.3:53641850-53641869 | MS.gene30429:intron | 60.0% | |
| TGGAACCGCGCTGCAACGAA+GGG | + | chr7.3:53641325-53641344 | MS.gene30429:intron | 60.0% | |
| AACCGCCCTTCGTTGCAGCG+CGG | - | chr7.3:53641333-53641352 | None:intergenic | 65.0% | |
| AACCGCGCTGCAACGAAGGG+CGG | + | chr7.3:53641328-53641347 | MS.gene30429:intron | 65.0% | |
| AGCACCCCCCACATCCCTCA+GGG | + | chr7.3:53641413-53641432 | MS.gene30429:intron | 65.0% | |
| AGGAGGAGGGAAGAGGAGGG+TGG | - | chr7.3:53641456-53641475 | None:intergenic | 65.0% | |
| AGGGCGCACGAGAAGGCAGT+AGG | - | chr7.3:53640264-53640283 | None:intergenic | 65.0% | |
| ATGCCCCTGAGGGATGTGGG+GGG | - | chr7.3:53641420-53641439 | None:intergenic | 65.0% | |
| CGCACGAGAAGGCAGTAGGG+TGG | - | chr7.3:53640260-53640279 | None:intergenic | 65.0% | |
| CGGAGGAGGAGGGAAGAGGA+GGG | - | chr7.3:53641459-53641478 | None:intergenic | 65.0% | |
| GGAGGAGGGAAGAGGAGGGT+GGG | - | chr7.3:53641455-53641474 | None:intergenic | 65.0% | |
| GGCCGAGTGAGACAACGGGA+TGG | - | chr7.3:53640143-53640162 | None:intergenic | 65.0% | |
| GGGCGCACGAGAAGGCAGTA+GGG | - | chr7.3:53640263-53640282 | None:intergenic | 65.0% | |
| GGGCGCGCGAGGAAAGACAT+AGG | + | chr7.3:53641849-53641868 | MS.gene30429:intron | 65.0% | |
| TCGGAGGAGGAGGGAAGAGG+AGG | - | chr7.3:53641460-53641479 | None:intergenic | 65.0% | |
| !! | TAGGGGTGTCGGTGGTGTCG+TGG | - | chr7.3:53640488-53640507 | None:intergenic | 65.0% |
| GAGCACCCCCCACATCCCTC+AGG | + | chr7.3:53641412-53641431 | MS.gene30429:intron | 70.0% | |
| GCACCCCCCACATCCCTCAG+GGG | + | chr7.3:53641414-53641433 | MS.gene30429:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 53639687 | 53643717 | 53639687 | ID=MS.gene30429 |
| chr7.3 | mRNA | 53639687 | 53643717 | 53639687 | ID=MS.gene30429.t1;Parent=MS.gene30429 |
| chr7.3 | exon | 53639687 | 53639767 | 53639687 | ID=MS.gene30429.t1.exon1;Parent=MS.gene30429.t1 |
| chr7.3 | CDS | 53639687 | 53639767 | 53639687 | ID=cds.MS.gene30429.t1;Parent=MS.gene30429.t1 |
| chr7.3 | exon | 53642107 | 53642563 | 53642107 | ID=MS.gene30429.t1.exon2;Parent=MS.gene30429.t1 |
| chr7.3 | CDS | 53642107 | 53642563 | 53642107 | ID=cds.MS.gene30429.t1;Parent=MS.gene30429.t1 |
| chr7.3 | exon | 53642826 | 53642950 | 53642826 | ID=MS.gene30429.t1.exon3;Parent=MS.gene30429.t1 |
| chr7.3 | CDS | 53642826 | 53642950 | 53642826 | ID=cds.MS.gene30429.t1;Parent=MS.gene30429.t1 |
| chr7.3 | exon | 53643412 | 53643717 | 53643412 | ID=MS.gene30429.t1.exon4;Parent=MS.gene30429.t1 |
| chr7.3 | CDS | 53643412 | 53643717 | 53643412 | ID=cds.MS.gene30429.t1;Parent=MS.gene30429.t1 |
| Gene Sequence |
| Protein sequence |
