AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30924

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30924.t1 MTR_2g096160 50.463 216 25 5 60 193 608 823 6.20e-51 176
MS.gene30924.t1 MTR_4g061833 44.175 206 33 4 60 183 454 659 2.21e-40 145
MS.gene30924.t1 MTR_4g061833 44.175 206 33 4 60 183 605 810 4.38e-40 145
MS.gene30924.t1 MTR_4g061930 44.175 206 33 4 60 183 605 810 4.38e-40 145
MS.gene30924.t1 MTR_2g080220 48.624 109 27 2 60 139 607 715 6.55e-26 104
MS.gene30924.t1 MTR_6g048090 39.456 147 55 3 60 172 602 748 6.18e-24 99.0
MS.gene30924.t1 MTR_2g030310 45.872 109 30 2 60 139 626 734 1.42e-23 97.8
MS.gene30924.t1 MTR_2g030310 45.872 109 30 2 60 139 626 734 1.81e-23 97.4
MS.gene30924.t1 MTR_8g037700 48.624 109 26 3 60 139 636 743 3.03e-22 94.0
MS.gene30924.t1 MTR_1g100110 39.394 132 61 2 60 172 606 737 8.11e-22 92.8
MS.gene30924.t1 MTR_7g115300 44.954 109 31 2 60 139 634 742 2.38e-21 91.3
MS.gene30924.t1 MTR_1g080740 44.954 109 31 2 60 139 629 737 3.40e-21 90.9
MS.gene30924.t1 MTR_4g095012 44.954 109 31 2 60 139 579 687 6.34e-21 90.1
MS.gene30924.t1 MTR_7g073660 44.037 109 32 2 60 139 647 755 6.57e-21 90.1
MS.gene30924.t1 MTR_1g040200 42.727 110 34 2 59 139 169 278 1.60e-20 87.8
MS.gene30924.t1 MTR_4g109010 43.119 109 31 3 60 139 642 748 2.26e-19 85.9
MS.gene30924.t1 MTR_4g095032 59.091 66 27 0 60 125 544 609 2.73e-19 85.5
MS.gene30924.t1 MTR_1g040073 41.284 109 35 2 60 139 538 646 4.20e-19 84.7
MS.gene30924.t1 MTR_8g467150 41.284 109 35 2 60 139 554 662 4.45e-19 84.7
MS.gene30924.t1 MTR_4g095042 59.091 66 27 0 60 125 603 668 4.47e-19 84.7
MS.gene30924.t1 MTR_2g072740 46.250 80 41 1 60 139 113 190 5.65e-19 82.0
MS.gene30924.t1 MTR_4g095045 59.091 66 27 0 60 125 412 477 5.74e-19 84.3
MS.gene30924.t1 MTR_7g015550 57.353 68 26 2 60 124 638 705 1.34e-16 77.8
MS.gene30924.t1 MTR_7g015510 57.353 68 26 2 60 124 638 705 1.37e-16 77.8
MS.gene30924.t1 MTR_7g015420 57.353 68 26 2 60 124 629 696 1.51e-16 77.4
MS.gene30924.t1 MTR_7g015390 55.882 68 27 2 60 124 638 705 2.67e-16 76.6
MS.gene30924.t1 MTR_7g015670 57.353 68 26 2 60 124 641 708 3.14e-16 76.6
MS.gene30924.t1 MTR_5g047070 51.515 66 32 0 60 125 378 443 3.85e-16 76.3
MS.gene30924.t1 MTR_4g111925 63.462 52 19 0 60 111 647 698 3.91e-16 76.3
MS.gene30924.t1 MTR_5g047120 52.239 67 30 1 60 124 619 685 4.56e-16 76.3
MS.gene30924.t1 MTR_6g015805 52.941 68 29 2 60 124 641 708 4.74e-16 76.3
MS.gene30924.t1 MTR_7g015310 57.353 68 26 2 60 124 630 697 4.90e-16 75.9
MS.gene30924.t1 MTR_7g015240 55.882 68 27 2 60 124 627 694 2.64e-15 73.9
MS.gene30924.t1 MTR_7g015280 55.882 68 27 2 60 124 620 687 3.11e-15 73.6
MS.gene30924.t1 MTR_4g099130 53.846 65 28 1 62 124 186 250 7.21e-15 72.0
MS.gene30924.t1 MTR_7g015230 54.412 68 28 2 60 124 640 707 1.50e-14 71.6
MS.gene30924.t1 MTR_4g052290 54.412 68 28 2 60 124 633 700 1.92e-14 71.2
MS.gene30924.t1 MTR_7g057170 48.611 72 35 1 55 124 717 788 2.30e-14 71.2
MS.gene30924.t1 MTR_7g015250 52.941 68 29 2 60 124 624 691 2.33e-14 71.2
MS.gene30924.t1 MTR_7g057170 48.611 72 35 1 55 124 717 788 2.46e-14 71.2
MS.gene30924.t1 MTR_7g015320 54.412 68 28 2 60 124 629 696 2.53e-14 71.2
MS.gene30924.t1 MTR_7g015290 54.412 68 29 1 60 125 146 213 5.62e-14 69.3
MS.gene30924.t1 MTR_3g086120 45.833 72 36 2 55 124 709 779 7.62e-14 69.7
MS.gene30924.t1 MTR_5g030920 47.761 67 33 1 60 124 680 746 7.88e-14 69.7
MS.gene30924.t1 MTR_5g030920 47.761 67 33 1 60 124 703 769 8.22e-14 69.7
MS.gene30924.t1 MTR_3g086120 45.833 72 36 2 55 124 709 779 8.46e-14 69.7
MS.gene30924.t1 MTR_2g100470 49.254 67 32 1 60 124 657 723 9.79e-14 69.3
MS.gene30924.t1 MTR_8g015010 41.772 79 42 1 55 133 715 789 1.20e-13 68.9
MS.gene30924.t1 MTR_4g115630 53.846 65 27 2 63 124 325 389 1.29e-13 68.9
MS.gene30924.t1 MTR_7g033135 44.595 74 38 2 60 131 421 493 1.44e-13 68.9
MS.gene30924.t1 MTR_5g013610 47.826 69 34 1 60 126 178 246 1.51e-13 68.2
MS.gene30924.t1 MTR_8g070880 39.640 111 46 4 32 124 693 800 2.27e-13 68.2
MS.gene30924.t1 MTR_8g070910 50.000 72 34 1 55 124 376 447 2.44e-13 68.2
MS.gene30924.t1 MTR_1g089600 37.719 114 58 5 23 124 359 471 2.52e-13 68.2
MS.gene30924.t1 MTR_1g066950 44.578 83 41 3 53 131 696 777 3.24e-13 67.8
MS.gene30924.t1 MTR_2g100450 47.692 65 32 1 62 124 476 540 4.47e-13 67.4
MS.gene30924.t1 MTR_2g100450 47.692 65 32 1 62 124 681 745 5.58e-13 67.0
MS.gene30924.t1 MTR_2g100450 47.692 65 32 1 62 124 681 745 6.36e-13 67.0
MS.gene30924.t1 MTR_5g092120 43.662 71 40 0 55 125 174 244 6.51e-13 66.6
MS.gene30924.t1 MTR_5g079840 46.479 71 37 1 55 125 187 256 6.88e-13 66.6
MS.gene30924.t1 MTR_8g014860 46.875 64 34 0 63 126 207 270 7.00e-13 65.9
MS.gene30924.t1 MTR_6g011570 45.714 70 36 1 60 127 182 251 7.33e-13 66.6
MS.gene30924.t1 MTR_1g027490 45.833 72 36 2 55 124 498 568 7.48e-13 66.6
MS.gene30924.t1 MTR_8g014790 43.750 64 36 0 63 126 675 738 7.92e-13 66.6
MS.gene30924.t1 MTR_8g015100 39.048 105 53 3 29 133 561 654 9.31e-13 66.6
MS.gene30924.t1 MTR_8g015100 39.048 105 53 3 29 133 344 437 9.50e-13 66.2
MS.gene30924.t1 MTR_8g014690 45.455 66 36 0 60 125 674 739 1.07e-12 66.2
MS.gene30924.t1 MTR_6g088510 52.239 67 29 2 60 124 203 268 1.16e-12 65.9
MS.gene30924.t1 MTR_3g115500 49.180 61 31 0 60 120 61 121 1.24e-12 65.1
MS.gene30924.t1 MTR_8g015340 51.667 60 29 0 60 119 704 763 1.25e-12 66.2
MS.gene30924.t1 MTR_2g019990 49.180 61 31 0 60 120 61 121 1.34e-12 65.9
MS.gene30924.t1 MTR_4g123480 46.970 66 33 2 60 125 21 84 1.41e-12 63.9
MS.gene30924.t1 MTR_7g061220 40.426 94 50 4 43 131 185 277 1.46e-12 65.9
MS.gene30924.t1 MTR_1g027660 44.444 72 37 2 55 124 490 560 1.51e-12 65.9
MS.gene30924.t1 MTR_7g083500 44.444 72 38 1 55 124 183 254 1.52e-12 65.5
MS.gene30924.t1 MTR_1g027640 44.444 72 37 2 55 124 518 588 1.59e-12 65.9
MS.gene30924.t1 MTR_7g094100 49.254 67 31 2 60 124 395 460 1.62e-12 65.9
MS.gene30924.t1 MTR_7g094100 49.254 67 31 2 60 124 395 460 1.77e-12 65.5
MS.gene30924.t1 MTR_1g027600 44.444 72 37 2 55 124 516 586 1.79e-12 65.5
MS.gene30924.t1 MTR_8g074920 43.939 66 35 1 60 123 185 250 1.86e-12 65.5
MS.gene30924.t1 MTR_7g100630 39.583 96 52 4 41 131 689 783 1.86e-12 65.5
MS.gene30924.t1 MTR_1g020060 44.156 77 41 1 60 134 157 233 2.11e-12 65.1
MS.gene30924.t1 MTR_2g019990 49.180 61 31 0 60 120 197 257 2.20e-12 65.1
MS.gene30924.t1 MTR_8g014970 46.032 63 34 0 63 125 439 501 2.24e-12 65.5
MS.gene30924.t1 MTR_2g084120 47.222 72 36 1 55 124 199 270 2.43e-12 65.1
MS.gene30924.t1 MTR_3g062570 47.945 73 31 2 59 124 609 681 2.96e-12 65.1
MS.gene30924.t1 MTR_1g027670 44.444 72 37 2 55 124 155 225 2.98e-12 64.7
MS.gene30924.t1 MTR_3g062570 47.945 73 31 2 59 124 473 545 3.05e-12 65.1
MS.gene30924.t1 MTR_8g014760 48.438 64 31 1 63 124 670 733 3.26e-12 65.1
MS.gene30924.t1 MTR_3g062570 40.816 98 42 3 43 124 699 796 3.53e-12 64.7
MS.gene30924.t1 MTR_5g047110 50.769 65 27 2 62 124 616 677 3.58e-12 64.7
MS.gene30924.t1 MTR_5g038450 43.939 66 37 0 60 125 250 315 3.78e-12 64.7
MS.gene30924.t1 MTR_3g115500 49.180 61 31 0 60 120 157 217 4.21e-12 64.3
MS.gene30924.t1 MTR_7g058810 47.458 59 31 0 62 120 203 261 4.30e-12 64.3
MS.gene30924.t1 MTR_4g133920 46.154 65 35 0 55 119 138 202 4.40e-12 63.9
MS.gene30924.t1 MTR_8g100155 42.254 71 40 1 55 125 178 247 4.41e-12 64.3
MS.gene30924.t1 MTR_7g074610 43.939 66 36 1 60 125 203 267 4.66e-12 64.3
MS.gene30924.t1 MTR_3g462840 44.286 70 37 1 60 127 179 248 4.66e-12 64.3
MS.gene30924.t1 MTR_5g058090 46.154 65 32 1 63 124 693 757 4.79e-12 64.3
MS.gene30924.t1 MTR_3g115500 49.180 61 31 0 60 120 175 235 4.90e-12 63.9
MS.gene30924.t1 MTR_4g069970 50.746 67 30 2 60 124 247 312 4.91e-12 64.3
MS.gene30924.t1 MTR_1g027570 43.056 72 38 2 55 124 513 583 5.50e-12 64.3
MS.gene30924.t1 MTR_4g069970 50.746 67 30 2 60 124 247 312 5.84e-12 63.9
MS.gene30924.t1 MTR_4g069970 50.746 67 30 2 60 124 247 312 5.91e-12 63.9
MS.gene30924.t1 MTR_5g047060 50.769 65 27 2 62 124 632 693 6.06e-12 64.3
MS.gene30924.t1 MTR_8g469230 43.939 66 37 0 60 125 246 311 6.18e-12 63.9
MS.gene30924.t1 MTR_4g115120 45.455 66 35 1 60 125 225 289 6.36e-12 63.9
MS.gene30924.t1 MTR_3g062590 39.796 98 43 3 43 124 701 798 7.77e-12 63.9
MS.gene30924.t1 MTR_1g117060 43.939 66 37 0 55 120 200 265 8.68e-12 63.5
MS.gene30924.t1 MTR_8g014700 46.875 64 32 1 63 124 679 742 1.02e-11 63.5
MS.gene30924.t1 MTR_8g014700 46.875 64 32 1 63 124 703 766 1.05e-11 63.5
MS.gene30924.t1 MTR_1g027580 43.056 72 38 2 55 124 513 583 1.08e-11 63.5
MS.gene30924.t1 MTR_2g020810 40.909 66 39 0 55 120 221 286 1.08e-11 63.2
MS.gene30924.t1 MTR_2g014960 45.833 72 37 1 55 124 711 782 1.13e-11 63.5
MS.gene30924.t1 MTR_5g026370 43.939 66 36 1 60 125 203 267 1.26e-11 62.8
MS.gene30924.t1 MTR_7g015620 47.887 71 31 2 60 124 599 669 1.66e-11 62.8
MS.gene30924.t1 MTR_3g088750 34.259 108 67 3 55 159 527 633 1.74e-11 62.8
MS.gene30924.t1 MTR_4g125260 39.000 100 49 4 30 127 176 265 1.77e-11 62.8
MS.gene30924.t1 MTR_1g015020 42.857 70 37 2 60 127 194 262 1.93e-11 62.4
MS.gene30924.t1 MTR_2g095880 40.845 71 42 0 55 125 194 264 1.93e-11 62.4
MS.gene30924.t1 MTR_3g096555 46.970 66 34 1 55 120 405 469 1.98e-11 62.4
MS.gene30924.t1 MTR_3g096555 46.970 66 34 1 55 120 447 511 1.98e-11 62.4
MS.gene30924.t1 MTR_1g097160 47.945 73 35 2 54 124 406 477 2.00e-11 62.4
MS.gene30924.t1 MTR_5g055310 51.471 68 27 3 59 124 420 483 2.18e-11 62.4
MS.gene30924.t1 MTR_4g118855 50.847 59 28 1 62 120 182 239 2.25e-11 62.0
MS.gene30924.t1 MTR_2g095880 40.845 71 42 0 55 125 194 264 2.44e-11 62.0
MS.gene30924.t1 MTR_5g075650 47.222 72 31 2 60 124 721 792 2.49e-11 62.4
MS.gene30924.t1 MTR_4g126970 47.761 67 32 2 62 126 240 305 2.53e-11 62.0
MS.gene30924.t1 MTR_4g131900 42.424 66 38 0 55 120 204 269 2.56e-11 62.0
MS.gene30924.t1 MTR_3g088785 43.056 72 38 2 55 124 524 594 2.63e-11 62.4
MS.gene30924.t1 MTR_5g023980 39.437 71 42 1 55 125 203 272 3.01e-11 61.2
MS.gene30924.t1 MTR_2g096950 42.254 71 40 1 55 125 186 255 3.07e-11 61.6
MS.gene30924.t1 MTR_3g050780 42.424 66 38 0 55 120 181 246 3.26e-11 61.6
MS.gene30924.t1 MTR_6g011330 40.909 66 39 0 60 125 247 312 3.53e-11 61.6
MS.gene30924.t1 MTR_8g014740 45.312 64 33 1 63 124 36 99 3.61e-11 60.5
MS.gene30924.t1 MTR_2g100550 43.939 66 35 1 63 126 439 504 3.82e-11 61.6
MS.gene30924.t1 MTR_1g010220 37.719 114 62 4 19 124 474 586 4.47e-11 61.6
MS.gene30924.t1 MTR_7g082530 52.941 68 26 3 59 124 468 531 4.74e-11 61.6
MS.gene30924.t1 MTR_7g109670 46.269 67 34 1 60 124 489 555 4.80e-11 61.6
MS.gene30924.t1 MTR_7g082530 52.941 68 26 3 59 124 468 531 4.83e-11 61.6
MS.gene30924.t1 MTR_3g088760 41.667 72 39 2 55 124 522 592 4.88e-11 61.6
MS.gene30924.t1 MTR_7g009320 39.394 66 40 0 60 125 237 302 5.18e-11 61.2
MS.gene30924.t1 MTR_8g028115 43.750 64 34 1 63 124 30 93 5.25e-11 60.1
MS.gene30924.t1 MTR_1g031780 47.692 65 31 2 62 124 160 223 5.81e-11 60.8
MS.gene30924.t1 MTR_8g008820 48.276 58 30 0 62 119 193 250 5.93e-11 60.8
MS.gene30924.t1 MTR_1g110110 46.753 77 30 4 50 124 422 489 6.10e-11 61.2
MS.gene30924.t1 MTR_8g461120 42.254 71 37 1 63 133 687 753 7.44e-11 60.8
MS.gene30924.t1 MTR_3g075440 47.692 65 30 3 63 124 460 523 7.46e-11 60.8
MS.gene30924.t1 MTR_5g033690 41.791 67 36 2 60 124 417 482 7.73e-11 60.8
MS.gene30924.t1 MTR_8g461120 42.254 71 37 1 63 133 662 728 7.84e-11 60.8
MS.gene30924.t1 MTR_1g086870 46.269 67 34 1 60 124 395 461 8.06e-11 60.8
MS.gene30924.t1 MTR_8g014930 42.254 71 37 1 63 133 639 705 8.06e-11 60.8
MS.gene30924.t1 MTR_2g008400 46.575 73 36 2 54 124 397 468 8.48e-11 60.8
MS.gene30924.t1 MTR_8g014930 42.254 71 37 1 63 133 673 739 8.76e-11 60.8
MS.gene30924.t1 MTR_3g088755 41.667 72 39 2 55 124 529 599 8.96e-11 60.8
MS.gene30924.t1 MTR_2g039290 44.776 67 35 1 60 124 1167 1233 9.24e-11 60.8
MS.gene30924.t1 MTR_2g039290 44.776 67 35 1 60 124 945 1011 9.44e-11 60.8
MS.gene30924.t1 MTR_2g039290 44.776 67 35 1 60 124 1179 1245 9.60e-11 60.8
MS.gene30924.t1 MTR_5g031870 44.068 59 33 0 62 120 240 298 9.82e-11 60.5
MS.gene30924.t1 MTR_5g031870 44.068 59 33 0 62 120 245 303 9.96e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30924.t1 AT3G46290 43.519 216 39 6 60 192 590 805 2.30e-39 143
MS.gene30924.t1 AT5G59700 42.130 216 40 7 60 193 587 799 5.75e-36 133
MS.gene30924.t1 AT2G39360 52.273 132 27 4 60 162 593 717 6.25e-31 119
MS.gene30924.t1 AT5G54380 49.541 109 26 2 60 139 615 723 1.84e-26 106
MS.gene30924.t1 AT1G30570 45.872 109 30 2 60 139 625 733 5.85e-24 99.0
MS.gene30924.t1 AT5G61350 49.541 109 25 3 60 139 636 743 1.80e-23 97.4
MS.gene30924.t1 AT5G24010 45.872 109 30 2 60 139 594 702 2.05e-23 97.4
MS.gene30924.t1 AT4G39110 49.541 109 25 3 60 139 631 738 4.84e-22 93.6
MS.gene30924.t1 AT2G21480 47.009 117 30 4 60 147 630 743 7.89e-22 92.8
MS.gene30924.t1 AT3G04690 44.037 109 32 2 60 139 622 730 4.47e-21 90.5
MS.gene30924.t1 AT3G51550 44.037 109 32 2 60 139 642 750 6.55e-21 90.1
MS.gene30924.t1 AT5G28680 44.444 108 31 2 60 138 626 733 3.17e-20 88.2
MS.gene30924.t1 AT5G28680 44.444 108 31 2 60 138 626 733 3.17e-20 88.2
MS.gene30924.t1 AT5G38990 55.882 68 27 2 60 124 634 701 2.07e-17 80.1
MS.gene30924.t1 AT5G39000 50.000 78 34 2 60 136 627 700 5.59e-17 79.0
MS.gene30924.t1 AT4G29450 40.541 111 55 3 60 163 683 789 2.81e-16 76.6
MS.gene30924.t1 AT4G29180 53.731 67 29 1 60 124 683 749 9.80e-16 75.1
MS.gene30924.t1 AT4G29180 53.731 67 29 1 60 124 685 751 1.06e-15 75.1
MS.gene30924.t1 AT4G29180 53.731 67 29 1 60 124 682 748 1.08e-15 75.1
MS.gene30924.t1 AT2G28960 50.000 68 32 1 59 124 546 613 1.21e-15 75.1
MS.gene30924.t1 AT2G28960 50.000 68 32 1 59 124 678 745 1.47e-15 74.7
MS.gene30924.t1 AT1G51800 40.426 94 45 2 33 124 673 757 1.91e-15 74.3
MS.gene30924.t1 AT2G28970 48.611 72 35 1 55 124 545 616 2.92e-15 73.9
MS.gene30924.t1 AT5G48740 48.611 72 35 1 55 124 708 779 2.99e-15 73.9
MS.gene30924.t1 AT2G28970 48.611 72 35 1 55 124 580 651 3.03e-15 73.9
MS.gene30924.t1 AT3G46355 48.611 72 35 1 55 124 88 159 5.46e-15 72.0
MS.gene30924.t1 AT4G20450 47.222 72 36 1 55 124 692 763 8.54e-15 72.4
MS.gene30924.t1 AT1G07560 50.820 61 30 0 60 120 673 733 2.18e-14 71.2
MS.gene30924.t1 AT5G59650 43.056 72 39 1 55 124 688 759 2.34e-14 71.2
MS.gene30924.t1 AT5G59650 43.056 72 39 1 55 124 680 751 2.36e-14 71.2
MS.gene30924.t1 AT4G20450 45.833 72 37 1 55 124 692 763 2.48e-14 71.2
MS.gene30924.t1 AT2G07180 48.485 66 33 1 60 125 202 266 2.97e-14 70.9
MS.gene30924.t1 AT2G07180 48.485 66 33 1 60 125 202 266 2.97e-14 70.9
MS.gene30924.t1 AT2G23200 40.909 110 34 4 60 139 593 701 3.39e-14 70.9
MS.gene30924.t1 AT1G79620 52.778 72 32 1 55 124 738 809 6.16e-14 70.1
MS.gene30924.t1 AT1G79620 52.778 72 32 1 55 124 764 835 6.18e-14 70.1
MS.gene30924.t1 AT1G79620 54.412 68 31 0 55 122 738 805 8.02e-14 69.7
MS.gene30924.t1 AT5G49760 53.731 67 29 1 60 124 736 802 8.49e-14 69.7
MS.gene30924.t1 AT5G49770 42.593 108 47 4 32 124 698 805 1.19e-13 69.3
MS.gene30924.t1 AT5G59680 43.056 72 39 1 55 124 681 752 1.29e-13 68.9
MS.gene30924.t1 AT3G21340 47.059 68 34 1 59 124 697 764 1.32e-13 68.9
MS.gene30924.t1 AT1G51850 47.059 68 34 1 59 124 663 730 1.44e-13 68.9
MS.gene30924.t1 AT1G51850 47.059 68 34 1 59 124 683 750 1.46e-13 68.9
MS.gene30924.t1 AT1G51830 47.059 68 34 1 59 124 498 565 1.46e-13 68.9
MS.gene30924.t1 AT1G51830 47.059 68 34 1 59 124 491 558 1.49e-13 68.9
MS.gene30924.t1 AT3G53840 48.529 68 32 2 59 124 464 530 2.13e-13 68.2
MS.gene30924.t1 AT1G67720 50.746 67 30 2 60 124 712 777 2.21e-13 68.6
MS.gene30924.t1 AT3G46410 43.056 72 39 1 55 124 88 159 2.26e-13 67.4
MS.gene30924.t1 AT2G37050 41.111 90 48 3 46 131 694 782 4.23e-13 67.4
MS.gene30924.t1 AT2G37050 41.111 90 48 3 46 131 695 783 4.23e-13 67.4
MS.gene30924.t1 AT1G51805 47.761 67 33 1 60 124 659 725 4.29e-13 67.4
MS.gene30924.t1 AT1G51805 47.761 67 33 1 60 124 683 749 4.44e-13 67.4
MS.gene30924.t1 AT2G29000 47.059 68 34 1 59 124 670 737 4.47e-13 67.4
MS.gene30924.t1 AT4G29990 43.056 72 39 1 55 124 673 744 5.31e-13 67.4
MS.gene30924.t1 AT1G49100 45.588 68 35 1 59 124 686 753 5.32e-13 67.4
MS.gene30924.t1 AT2G04300 44.444 72 38 1 55 124 683 754 5.91e-13 67.0
MS.gene30924.t1 AT2G04300 44.444 72 38 1 55 124 642 713 6.39e-13 67.0
MS.gene30924.t1 AT3G46400 46.875 64 32 1 63 124 685 748 6.55e-13 67.0
MS.gene30924.t1 AT2G11520 47.692 65 31 2 63 124 334 398 7.81e-13 66.6
MS.gene30924.t1 AT3G46330 48.611 72 34 2 63 131 675 746 8.79e-13 66.6
MS.gene30924.t1 AT3G46330 48.611 72 34 2 63 131 651 722 9.26e-13 66.6
MS.gene30924.t1 AT1G51880 44.118 68 36 1 59 124 670 737 1.15e-12 66.2
MS.gene30924.t1 AT1G51880 44.118 68 36 1 59 124 696 763 1.16e-12 66.2
MS.gene30924.t1 AT1G51880 44.118 68 36 1 59 124 688 755 1.21e-12 66.2
MS.gene30924.t1 AT2G48010 46.575 73 36 2 54 124 387 458 1.35e-12 65.9
MS.gene30924.t1 AT2G39110 44.595 74 39 1 55 126 201 274 1.51e-12 65.9
MS.gene30924.t1 AT5G16900 48.438 64 31 1 63 124 496 559 1.54e-12 65.9
MS.gene30924.t1 AT3G46370 41.667 72 40 1 55 124 588 659 1.54e-12 65.9
MS.gene30924.t1 AT3G46370 41.667 72 40 1 55 124 588 659 1.54e-12 65.9
MS.gene30924.t1 AT5G16900 48.438 64 31 1 63 124 682 745 1.57e-12 65.9
MS.gene30924.t1 AT5G16900 48.438 64 31 1 63 124 682 745 1.57e-12 65.9
MS.gene30924.t1 AT2G39110 44.595 74 39 1 55 126 186 259 1.58e-12 65.5
MS.gene30924.t1 AT1G18390 32.759 174 63 8 55 196 441 592 1.91e-12 65.5
MS.gene30924.t1 AT2G28990 45.312 64 33 1 63 124 686 749 2.07e-12 65.5
MS.gene30924.t1 AT2G28990 45.312 64 33 1 63 124 686 749 2.07e-12 65.5
MS.gene30924.t1 AT1G66880 31.447 159 77 7 59 196 695 842 2.14e-12 65.5
MS.gene30924.t1 AT1G51810 41.667 72 40 1 55 124 551 622 2.43e-12 65.5
MS.gene30924.t1 AT1G18390 32.759 174 63 8 55 196 447 598 2.50e-12 65.1
MS.gene30924.t1 AT1G51860 44.118 68 36 1 59 124 544 611 2.54e-12 65.1
MS.gene30924.t1 AT1G51910 42.647 68 37 1 59 124 678 745 2.60e-12 65.1
MS.gene30924.t1 AT1G51890 44.118 68 36 1 59 124 610 677 2.71e-12 65.1
MS.gene30924.t1 AT2G28590 40.845 71 42 0 55 125 201 271 2.73e-12 64.7
MS.gene30924.t1 AT1G51890 44.118 68 36 1 59 124 674 741 2.85e-12 65.1
MS.gene30924.t1 AT1G51860 44.118 68 36 1 59 124 688 755 3.12e-12 65.1
MS.gene30924.t1 AT2G28590 42.424 66 38 0 55 120 201 266 3.41e-12 64.7
MS.gene30924.t1 AT1G51890 44.118 68 36 1 59 124 674 741 3.41e-12 64.7
MS.gene30924.t1 AT1G51890 44.118 68 36 1 59 124 696 763 3.43e-12 65.1
MS.gene30924.t1 AT1G66880 31.447 159 77 7 59 196 1074 1221 3.44e-12 65.1
MS.gene30924.t1 AT1G06840 39.796 98 43 3 43 124 704 801 3.60e-12 64.7
MS.gene30924.t1 AT1G51890 44.118 68 36 1 59 124 402 469 3.75e-12 64.7
MS.gene30924.t1 AT3G53590 45.833 72 32 2 60 124 726 797 3.77e-12 64.7
MS.gene30924.t1 AT5G35580 42.254 71 38 2 59 127 199 268 3.77e-12 64.7
MS.gene30924.t1 AT3G58690 47.222 72 36 1 55 124 192 263 4.14e-12 64.3
MS.gene30924.t1 AT5G35580 42.254 71 38 2 59 127 187 256 4.16e-12 64.3
MS.gene30924.t1 AT5G38210 50.000 68 28 3 59 124 465 528 4.46e-12 64.7
MS.gene30924.t1 AT5G38210 50.000 68 28 3 59 124 477 540 4.61e-12 64.3
MS.gene30924.t1 AT5G01020 43.939 66 36 1 60 125 181 245 4.90e-12 64.3
MS.gene30924.t1 AT1G51820 45.588 68 35 1 59 124 683 750 4.91e-12 64.3
MS.gene30924.t1 AT5G38210 50.000 68 28 3 59 124 459 522 5.14e-12 64.3
MS.gene30924.t1 AT1G20650 47.541 61 32 0 60 120 185 245 5.18e-12 63.9
MS.gene30924.t1 AT1G51820 45.588 68 35 1 59 124 421 488 5.53e-12 64.3
MS.gene30924.t1 AT1G76370 43.939 66 37 0 60 125 182 247 5.64e-12 63.9
MS.gene30924.t1 AT5G49780 37.963 108 52 4 32 124 598 705 6.68e-12 63.9
MS.gene30924.t1 AT5G49780 37.963 108 52 4 32 124 719 826 6.70e-12 63.9
MS.gene30924.t1 AT5G49780 37.963 108 52 4 32 124 697 804 6.87e-12 63.9
MS.gene30924.t1 AT3G46340 46.875 64 32 1 63 124 695 758 7.12e-12 63.9
MS.gene30924.t1 AT3G46420 46.875 64 32 1 63 124 640 703 7.18e-12 63.9
MS.gene30924.t1 AT5G02800 40.909 66 39 0 55 120 176 241 9.04e-12 63.2
MS.gene30924.t1 AT5G59670 41.667 72 40 1 55 124 665 736 9.43e-12 63.5
MS.gene30924.t1 AT5G59670 41.667 72 40 1 55 124 665 736 9.43e-12 63.5
MS.gene30924.t1 AT1G07870 42.424 66 38 0 55 120 206 271 9.99e-12 63.2
MS.gene30924.t1 AT1G07870 42.424 66 38 0 55 120 206 271 1.15e-11 63.2
MS.gene30924.t1 AT3G25490 46.875 64 31 2 63 124 217 279 1.15e-11 63.2
MS.gene30924.t1 AT1G66880 47.059 68 30 3 59 124 453 516 1.23e-11 63.2
MS.gene30924.t1 AT4G02010 47.761 67 33 1 60 124 489 555 1.24e-11 63.2
MS.gene30924.t1 AT5G40380 40.541 74 41 2 60 131 421 493 1.40e-11 63.2
MS.gene30924.t1 AT3G20530 42.254 71 41 0 55 125 186 256 1.43e-11 62.4
MS.gene30924.t1 AT1G71830 47.945 73 35 2 54 124 404 475 1.46e-11 63.2
MS.gene30924.t1 AT1G51870 42.647 68 37 1 59 124 635 702 1.49e-11 63.2
MS.gene30924.t1 AT1G51870 42.647 68 37 1 59 124 687 754 1.49e-11 63.2
MS.gene30924.t1 AT3G20530 42.254 71 41 0 55 125 186 256 1.51e-11 62.8
MS.gene30924.t1 AT5G40380 40.541 74 41 2 60 131 421 493 1.53e-11 62.8
MS.gene30924.t1 AT4G00330 46.970 66 31 2 63 124 231 296 1.66e-11 62.8
MS.gene30924.t1 AT4G00330 46.970 66 31 2 63 124 231 296 1.66e-11 62.8
MS.gene30924.t1 AT5G59660 48.485 66 28 2 63 124 572 635 1.70e-11 62.8
MS.gene30924.t1 AT5G59660 48.485 66 28 2 63 124 594 657 1.74e-11 62.8
MS.gene30924.t1 AT5G59660 48.485 66 28 2 63 124 597 660 1.83e-11 62.8
MS.gene30924.t1 AT1G70460 50.000 66 32 1 55 120 453 517 2.05e-11 62.8
MS.gene30924.t1 AT5G13160 42.424 66 38 0 55 120 189 254 2.36e-11 62.4
MS.gene30924.t1 AT1G70520 39.286 84 47 3 60 141 431 512 2.57e-11 62.4
MS.gene30924.t1 AT1G79670 44.444 72 37 2 55 124 522 592 2.84e-11 62.4
MS.gene30924.t1 AT5G02070 43.056 72 35 2 59 124 470 541 3.00e-11 62.0
MS.gene30924.t1 AT1G21230 50.794 63 28 2 64 124 518 579 3.08e-11 62.0
MS.gene30924.t1 AT1G21240 44.444 72 37 2 55 124 255 325 3.32e-11 62.0
MS.gene30924.t1 AT1G79670 44.444 72 37 2 55 124 485 555 3.88e-11 61.6
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 731 807 3.89e-11 62.0
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 726 802 3.93e-11 62.0
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 726 802 3.93e-11 62.0
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 726 802 3.93e-11 62.0
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 726 802 3.93e-11 62.0
MS.gene30924.t1 AT4G31100 47.619 63 30 2 64 124 555 616 3.99e-11 61.6
MS.gene30924.t1 AT4G31110 46.875 64 31 2 63 124 541 603 4.37e-11 61.6
MS.gene30924.t1 AT4G31110 46.875 64 31 2 63 124 563 625 4.52e-11 61.6
MS.gene30924.t1 AT1G70530 30.400 125 78 4 60 182 429 546 4.67e-11 61.6
MS.gene30924.t1 AT1G21240 49.206 63 29 2 64 124 525 586 4.95e-11 61.6
MS.gene30924.t1 AT5G01950 42.857 77 37 2 55 124 641 717 5.09e-11 61.6
MS.gene30924.t1 AT5G18610 45.902 61 33 0 60 120 191 251 5.20e-11 61.2
MS.gene30924.t1 AT5G18610 45.902 61 33 0 60 120 191 251 5.20e-11 61.2
MS.gene30924.t1 AT5G18610 45.902 61 33 0 60 120 191 251 5.20e-11 61.2
MS.gene30924.t1 AT1G70530 31.624 117 71 4 60 174 429 538 5.70e-11 61.2
MS.gene30924.t1 AT3G24790 44.262 61 34 0 60 120 155 215 6.04e-11 60.8
MS.gene30924.t1 AT3G24790 44.262 61 34 0 60 120 173 233 7.28e-11 60.8
MS.gene30924.t1 AT1G52290 34.091 132 78 5 60 184 248 377 7.37e-11 60.8

Find 42 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGCTAAAGTTGCTGATTT+TGG 0.167027 2.2:+5801150 MS.gene30924:CDS
TGATTATCGAGGGAGAATTA+AGG 0.282789 2.2:+5800792 MS.gene30924:CDS
CACATGCGTTTGATCGAACT+TGG 0.350257 2.2:-5801190 None:intergenic
TCATAGATCCATCGCTTCCT+AGG 0.370837 2.2:+5801309 MS.gene30924:CDS
GATTATCGAGGGAGAATTAA+GGG 0.377101 2.2:+5800793 MS.gene30924:CDS
AATAACCGCTTTAGCATTGC+CGG 0.416049 2.2:-5801082 None:intergenic
GATCGGGGAGCTCTCTCAAC+AGG 0.453866 2.2:+5801509 MS.gene30924:CDS
ATAACATTACAAATATGATC+GGG 0.481291 2.2:+5801493 MS.gene30924:CDS
GCATGTGTGCACAGCTGTCA+AGG 0.495350 2.2:+5801206 MS.gene30924:CDS
ATATTTGTAATGTTATCTTC+AGG 0.496127 2.2:-5801486 None:intergenic
TCCATCGCTTCCTAGGGAAA+TGG 0.498374 2.2:+5801316 MS.gene30924:CDS
ACGAAGAAACATTTGCGTCC+TGG 0.514538 2.2:-5801545 None:intergenic
CGTTTGATCGAACTTGGGAC+CGG 0.523603 2.2:-5801184 None:intergenic
GATAACATTACAAATATGAT+CGG 0.528486 2.2:+5801492 MS.gene30924:CDS
CAGGAAAGTGGCAGTGAAGA+GGG 0.528627 2.2:+5800820 MS.gene30924:CDS
ACCATTTCCCTAGGAAGCGA+TGG 0.544940 2.2:-5801317 None:intergenic
AGGGAGAATTAAGGGATGGC+AGG 0.550355 2.2:+5800801 MS.gene30924:CDS
GATAAGTTCACCATTTCCCT+AGG 0.553806 2.2:-5801326 None:intergenic
TTTCAAGAGGCTGTTGTGCA+AGG 0.554036 2.2:+5801459 MS.gene30924:CDS
CTTTAGCATTGCCGGTGTGA+AGG 0.559844 2.2:-5801074 None:intergenic
CCACACTTAAAAGCTTCAAA+CGG 0.563274 2.2:-5801582 None:intergenic
CATAGATCCATCGCTTCCTA+GGG 0.570752 2.2:+5801310 MS.gene30924:CDS
CATGTGTGCACAGCTGTCAA+GGG 0.579835 2.2:+5801207 MS.gene30924:CDS
TATGCTCTTCAACTTTCAAG+AGG 0.579926 2.2:+5801446 MS.gene30924:CDS
ATTAAGGGATGGCAGGAAAG+TGG 0.580291 2.2:+5800808 MS.gene30924:CDS
GGAAGCGATGGATCTATGAC+AGG 0.580519 2.2:-5801305 None:intergenic
GTTACTTGACGAGAACGTAA+TGG 0.589235 2.2:+5801131 MS.gene30924:CDS
CTTAAAAGCTTCAAACGGTA+CGG 0.592524 2.2:-5801577 None:intergenic
GCGATACCCTCTTGTGACTG+CGG 0.592569 2.2:-5800848 None:intergenic
GCAGGAAAGTGGCAGTGAAG+AGG 0.594366 2.2:+5800819 MS.gene30924:CDS
ATCGAGGGAGAATTAAGGGA+TGG 0.594603 2.2:+5800797 MS.gene30924:CDS
GGTGAATCCGCAGTCACAAG+AGG 0.611763 2.2:+5800841 MS.gene30924:CDS
TGATGCAGCATCACATACGA+TGG 0.617899 2.2:+5800678 MS.gene30924:CDS
ACATGCGTTTGATCGAACTT+GGG 0.618905 2.2:-5801189 None:intergenic
ATGTGTGCACAGCTGTCAAG+GGG 0.629282 2.2:+5801208 MS.gene30924:CDS
GATGCAGCATCACATACGAT+GGG 0.631862 2.2:+5800679 MS.gene30924:CDS
TCACACCGGCAATGCTAAAG+CGG 0.636123 2.2:+5801077 MS.gene30924:CDS
GTGAATCCGCAGTCACAAGA+GGG 0.652427 2.2:+5800842 MS.gene30924:CDS
TAACATTACAAATATGATCG+GGG 0.668584 2.2:+5801494 MS.gene30924:CDS
GGACTTCATTACCTTCACAC+CGG 0.685623 2.2:+5801063 MS.gene30924:intron
ACAGGTCAACAATTTCAACC+AGG 0.704247 2.2:+5801527 MS.gene30924:CDS
TATTTGCAGACTTCACGTCG+TGG 0.726953 2.2:-5801107 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACATTACAAATATGATC+GGG + chr2.2:5801493-5801512 MS.gene30924:CDS 20.0%
!! ATATTTGTAATGTTATCTTC+AGG - chr2.2:5801489-5801508 None:intergenic 20.0%
!! GATAACATTACAAATATGAT+CGG + chr2.2:5801492-5801511 MS.gene30924:CDS 20.0%
! TAACATTACAAATATGATCG+GGG + chr2.2:5801494-5801513 MS.gene30924:CDS 25.0%
!!! CAAACAATTTTGATTATCGA+GGG + chr2.2:5800782-5800801 MS.gene30924:CDS 25.0%
!!! TCAAACAATTTTGATTATCG+AGG + chr2.2:5800781-5800800 MS.gene30924:CDS 25.0%
GATATATGAATACATGGAGA+AGG + chr2.2:5800954-5800973 MS.gene30924:intron 30.0%
GATCCTGATATATGAATACA+TGG + chr2.2:5800948-5800967 MS.gene30924:intron 30.0%
TCTCCATGTATTCATATATC+AGG - chr2.2:5800954-5800973 None:intergenic 30.0%
! AGCAACACATATTTTATCGT+TGG - chr2.2:5800716-5800735 None:intergenic 30.0%
! GATGTATATTCCTTTTGTGT+AGG + chr2.2:5801282-5801301 MS.gene30924:intron 30.0%
! GATTTTGGATTGTCAAAAAC+CGG + chr2.2:5801165-5801184 MS.gene30924:CDS 30.0%
AAAATCAAACTAGACTCGCT+TGG + chr2.2:5801370-5801389 MS.gene30924:intron 35.0%
ACTCTCAAGAGTCATCTATA+CGG + chr2.2:5800979-5800998 MS.gene30924:intron 35.0%
ATTCAATGGGAGATGTATTG+TGG + chr2.2:5801414-5801433 MS.gene30924:intron 35.0%
CCACACTTAAAAGCTTCAAA+CGG - chr2.2:5801585-5801604 None:intergenic 35.0%
CTTAAAAGCTTCAAACGGTA+CGG - chr2.2:5801580-5801599 None:intergenic 35.0%
GATTATCGAGGGAGAATTAA+GGG + chr2.2:5800793-5800812 MS.gene30924:CDS 35.0%
TATGCTCTTCAACTTTCAAG+AGG + chr2.2:5801446-5801465 MS.gene30924:CDS 35.0%
TCATCATCACAGTAACCAAA+TGG - chr2.2:5800919-5800938 None:intergenic 35.0%
TGATTATCGAGGGAGAATTA+AGG + chr2.2:5800792-5800811 MS.gene30924:CDS 35.0%
! GGTGTTGAAAGACATTCAAT+GGG + chr2.2:5801401-5801420 MS.gene30924:intron 35.0%
! TGGTGTTGAAAGACATTCAA+TGG + chr2.2:5801400-5801419 MS.gene30924:intron 35.0%
!!! ATGGCTAAAGTTGCTGATTT+TGG + chr2.2:5801150-5801169 MS.gene30924:CDS 35.0%
AAGAGTCATCTATACGGTTC+AGG + chr2.2:5800985-5801004 MS.gene30924:intron 40.0%
AATAACCGCTTTAGCATTGC+CGG - chr2.2:5801085-5801104 None:intergenic 40.0%
ACAGGTCAACAATTTCAACC+AGG + chr2.2:5801527-5801546 MS.gene30924:CDS 40.0%
ACATGCGTTTGATCGAACTT+GGG - chr2.2:5801192-5801211 None:intergenic 40.0%
ATATGCATTGGATCTGCTAG+AGG + chr2.2:5801042-5801061 MS.gene30924:intron 40.0%
GATAAGTTCACCATTTCCCT+AGG - chr2.2:5801329-5801348 None:intergenic 40.0%
GTTACTTGACGAGAACGTAA+TGG + chr2.2:5801131-5801150 MS.gene30924:CDS 40.0%
TTAGTTCAGTCATCGCCATT+TGG + chr2.2:5800901-5800920 MS.gene30924:intron 40.0%
TTTCTATCAGTTGTTGCCTC+AGG - chr2.2:5801257-5801276 None:intergenic 40.0%
! TCAATCCAGAGTATTTCCTG+AGG + chr2.2:5801238-5801257 MS.gene30924:intron 40.0%
!! CCGTTTGAAGCTTTTAAGTG+TGG + chr2.2:5801582-5801601 MS.gene30924:CDS 40.0%
ACGAAGAAACATTTGCGTCC+TGG - chr2.2:5801548-5801567 None:intergenic 45.0%
ATCATCGATACAGCACTCGT+AGG + chr2.2:5801346-5801365 MS.gene30924:intron 45.0%
ATCGAGGGAGAATTAAGGGA+TGG + chr2.2:5800797-5800816 MS.gene30924:CDS 45.0%
ATTAAGGGATGGCAGGAAAG+TGG + chr2.2:5800808-5800827 MS.gene30924:CDS 45.0%
CACATGCGTTTGATCGAACT+TGG - chr2.2:5801193-5801212 None:intergenic 45.0%
CATAGATCCATCGCTTCCTA+GGG + chr2.2:5801310-5801329 MS.gene30924:CDS 45.0%
CTATGACAGGCCTACACAAA+AGG - chr2.2:5801295-5801314 None:intergenic 45.0%
CTCTCCTACCAACTTAAGCT+CGG - chr2.2:5801015-5801034 None:intergenic 45.0%
GAGAGGCTTGAGATATGCAT+TGG + chr2.2:5801030-5801049 MS.gene30924:intron 45.0%
GATGCAGCATCACATACGAT+GGG + chr2.2:5800679-5800698 MS.gene30924:CDS 45.0%
GGACTTCATTACCTTCACAC+CGG + chr2.2:5801063-5801082 MS.gene30924:intron 45.0%
TATTTGCAGACTTCACGTCG+TGG - chr2.2:5801110-5801129 None:intergenic 45.0%
TCATAGATCCATCGCTTCCT+AGG + chr2.2:5801309-5801328 MS.gene30924:CDS 45.0%
TCATCGATACAGCACTCGTA+GGG + chr2.2:5801347-5801366 MS.gene30924:intron 45.0%
TCTCCTACCAACTTAAGCTC+GGG - chr2.2:5801014-5801033 None:intergenic 45.0%
TGATGCAGCATCACATACGA+TGG + chr2.2:5800678-5800697 MS.gene30924:CDS 45.0%
TGTTGCCTCAGGAAATACTC+TGG - chr2.2:5801246-5801265 None:intergenic 45.0%
TTTCAAGAGGCTGTTGTGCA+AGG + chr2.2:5801459-5801478 MS.gene30924:CDS 45.0%
ACCATTTCCCTAGGAAGCGA+TGG - chr2.2:5801320-5801339 None:intergenic 50.0%
AGGGAGAATTAAGGGATGGC+AGG + chr2.2:5800801-5800820 MS.gene30924:CDS 50.0%
ATGTGTGCACAGCTGTCAAG+GGG + chr2.2:5801208-5801227 MS.gene30924:CDS 50.0%
CAGGAAAGTGGCAGTGAAGA+GGG + chr2.2:5800820-5800839 MS.gene30924:CDS 50.0%
CATGTGTGCACAGCTGTCAA+GGG + chr2.2:5801207-5801226 MS.gene30924:CDS 50.0%
CGTTTGATCGAACTTGGGAC+CGG - chr2.2:5801187-5801206 None:intergenic 50.0%
CTTTAGCATTGCCGGTGTGA+AGG - chr2.2:5801077-5801096 None:intergenic 50.0%
GGAAGCGATGGATCTATGAC+AGG - chr2.2:5801308-5801327 None:intergenic 50.0%
GTGAATCCGCAGTCACAAGA+GGG + chr2.2:5800842-5800861 MS.gene30924:CDS 50.0%
TAGACTCGCTTGGCTGTGTA+TGG + chr2.2:5801380-5801399 MS.gene30924:intron 50.0%
TCACACCGGCAATGCTAAAG+CGG + chr2.2:5801077-5801096 MS.gene30924:CDS 50.0%
TCCATCGCTTCCTAGGGAAA+TGG + chr2.2:5801316-5801335 MS.gene30924:CDS 50.0%
!! ACTCCCGAGCTTAAGTTGGT+AGG + chr2.2:5801008-5801027 MS.gene30924:intron 50.0%
!! CGAGCTTAAGTTGGTAGGAG+AGG + chr2.2:5801013-5801032 MS.gene30924:intron 50.0%
CAGGACTCCCGAGCTTAAGT+TGG + chr2.2:5801004-5801023 MS.gene30924:intron 55.0%
GCAGGAAAGTGGCAGTGAAG+AGG + chr2.2:5800819-5800838 MS.gene30924:CDS 55.0%
GCATGTGTGCACAGCTGTCA+AGG + chr2.2:5801206-5801225 MS.gene30924:CDS 55.0%
GCGATACCCTCTTGTGACTG+CGG - chr2.2:5800851-5800870 None:intergenic 55.0%
GGTGAATCCGCAGTCACAAG+AGG + chr2.2:5800841-5800860 MS.gene30924:CDS 55.0%
GATCGGGGAGCTCTCTCAAC+AGG + chr2.2:5801509-5801528 MS.gene30924:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 5800677 5801608 5800677 ID=MS.gene30924
chr2.2 mRNA 5800677 5801608 5800677 ID=MS.gene30924.t1;Parent=MS.gene30924
chr2.2 exon 5800677 5800863 5800677 ID=MS.gene30924.t1.exon1;Parent=MS.gene30924.t1
chr2.2 CDS 5800677 5800863 5800677 ID=cds.MS.gene30924.t1;Parent=MS.gene30924.t1
chr2.2 exon 5801064 5801247 5801064 ID=MS.gene30924.t1.exon2;Parent=MS.gene30924.t1
chr2.2 CDS 5801064 5801247 5801064 ID=cds.MS.gene30924.t1;Parent=MS.gene30924.t1
chr2.2 exon 5801304 5801363 5801304 ID=MS.gene30924.t1.exon3;Parent=MS.gene30924.t1
chr2.2 CDS 5801304 5801363 5801304 ID=cds.MS.gene30924.t1;Parent=MS.gene30924.t1
chr2.2 exon 5801446 5801608 5801446 ID=MS.gene30924.t1.exon4;Parent=MS.gene30924.t1
chr2.2 CDS 5801446 5801608 5801446 ID=cds.MS.gene30924.t1;Parent=MS.gene30924.t1
Gene Sequence

>MS.gene30924

ATGATGCAGCATCACATACGATGGGAAATAAATACTCCAACGATAAAATATGTGTTGCTTCAAACTTGTAGTATCGTGTTGCTTTTGCAGAAGTTCAAGAAAGTTCAAACAATTTTGATTATCGAGGGAGAATTAAGGGATGGCAGGAAAGTGGCAGTGAAGAGGGTGAATCCGCAGTCACAAGAGGGTATCGCAGAATTTAGAACTGAAATTGAAATGTTGTCTTAGTTCAGTCATCGCCATTTGGTTACTGTGATGATGATAATGAAATGATCCTGATATATGAATACATGGAGAAGGAAACTCTCAAGAGTCATCTATACGGTTCAGGACTCCCGAGCTTAAGTTGGTAGGAGAGGCTTGAGATATGCATTGGATCTGCTAGAGGACTTCATTACCTTCACACCGGCAATGCTAAAGCGGTTATTCACCACGACGTGAAGTCTGCAAATATGTTACTTGACGAGAACGTAATGGCTAAAGTTGCTGATTTTGGATTGTCAAAAACCGGTCCCAAGTTCGATCAAACGCATGTGTGCACAGCTGTCAAGGGGAGTTTCGTCAATCCAGAGTATTTCCTGAGGCAACAACTGATAGAAAAGTCTGATGTATATTCCTTTTGTGTAGGCCTGTCATAGATCCATCGCTTCCTAGGGAAATGGTGAACTTATCATCGATACAGCACTCGTAGGGAAAATCAAACTAGACTCGCTTGGCTGTGTATGGTGTTGAAAGACATTCAATGGGAGATGTATTGTGGAATTTGAAGTATGCTCTTCAACTTTCAAGAGGCTGTTGTGCAAGGTGATCCTGAAGATAACATTACAAATATGATCGGGGAGCTCTCTCAACAGGTCAACAATTTCAACCAGGACGCAAATGTTTCTTCGTCTGATTTTGCCGTACCGTTTGAAGCTTTTAAGTGTGGATGA
Protein sequence

>MS.gene30924.t1

MMQHHIRWEINTPTIKYVLLQTCSIVLLLQKFKKVQTILIIEGELRDGRKVAVKRVNPQSQEGLHYLHTGNAKAVIHHDVKSANMLLDENVMAKVADFGLSKTGPKFDQTHVCTAVKGSFVNPEPVIDPSLPREMVNLSSIQHSMLFNFQEAVVQGDPEDNITNMIGELSQQVNNFNQDANVSSSDFAVPFEAFKCG