AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31082

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31082.t1 MTR_2g098240 93.023 387 20 4 1 385 1 382 0.0 702
MS.gene31082.t1 MTR_4g065080 64.000 400 93 9 6 358 4 399 7.10e-172 486
MS.gene31082.t1 MTR_8g011780 44.663 356 161 6 9 334 12 361 5.51e-99 301
MS.gene31082.t1 MTR_7g053200 41.690 355 175 6 10 337 6 355 3.19e-90 278
MS.gene31082.t1 MTR_4g113790 38.624 378 179 7 12 339 88 462 4.00e-76 244
MS.gene31082.t1 MTR_3g010260 39.011 364 176 8 11 334 411 768 1.08e-75 250
MS.gene31082.t1 MTR_1g060790 39.889 361 173 8 12 334 467 821 4.29e-75 249
MS.gene31082.t1 MTR_2g062850 37.845 399 188 11 1 361 159 535 1.85e-74 241
MS.gene31082.t1 MTR_2g027240 38.420 367 176 9 12 334 201 561 3.61e-74 242
MS.gene31082.t1 MTR_8g446990 38.904 365 179 9 8 334 125 483 4.72e-74 239
MS.gene31082.t1 MTR_8g070530 41.033 329 170 6 10 332 592 902 4.42e-73 245
MS.gene31082.t1 MTR_7g081665 39.722 360 176 8 11 334 360 714 1.40e-72 241
MS.gene31082.t1 MTR_2g095980 43.293 328 169 7 10 331 366 682 1.55e-72 240
MS.gene31082.t1 MTR_2g085065 39.466 337 168 8 23 324 97 432 2.07e-72 233
MS.gene31082.t1 MTR_6g004720 37.950 361 179 8 12 334 248 601 5.74e-72 236
MS.gene31082.t1 MTR_2g095980 43.293 328 169 7 10 331 621 937 4.95e-71 239
MS.gene31082.t1 MTR_2g095980 43.293 328 169 7 10 331 621 937 7.12e-71 239
MS.gene31082.t1 MTR_8g006870 38.997 359 177 8 12 333 367 720 8.02e-71 236
MS.gene31082.t1 MTR_7g104180 37.270 381 188 9 12 354 489 856 8.88e-70 235
MS.gene31082.t1 MTR_2g018990 38.483 356 182 10 12 334 74 425 4.07e-69 224
MS.gene31082.t1 MTR_4g061610 41.566 332 159 8 8 331 637 941 6.00e-69 234
MS.gene31082.t1 MTR_8g089420 37.778 360 179 11 12 331 70 424 6.22e-69 224
MS.gene31082.t1 MTR_7g033640 36.164 365 187 7 12 334 229 589 6.91e-69 228
MS.gene31082.t1 MTR_2g069990 40.597 335 176 9 12 331 91 417 7.29e-68 222
MS.gene31082.t1 MTR_4g107280 31.507 365 186 9 20 374 92 402 1.23e-49 172
MS.gene31082.t1 MTR_7g073520 31.595 326 175 5 12 334 143 423 5.08e-47 167
MS.gene31082.t1 MTR_6g470940 30.250 400 219 12 3 383 863 1221 1.84e-46 171
MS.gene31082.t1 MTR_5g069000 31.176 340 209 9 3 335 748 1069 2.05e-44 164
MS.gene31082.t1 MTR_4g035835 31.176 340 209 9 3 335 744 1065 4.18e-44 164
MS.gene31082.t1 MTR_4g107280 29.201 363 158 9 20 374 92 363 1.15e-39 145
MS.gene31082.t1 MTR_2g040150 31.611 329 193 12 20 328 116 432 5.81e-38 143
MS.gene31082.t1 MTR_1g019340 30.321 343 209 11 12 337 103 432 7.03e-37 139
MS.gene31082.t1 MTR_1g019340 30.514 331 203 10 12 328 103 420 8.37e-37 140
MS.gene31082.t1 MTR_3g104700 30.294 340 199 11 12 328 89 413 3.40e-36 138
MS.gene31082.t1 MTR_1g042700 29.480 346 205 10 12 338 110 435 4.04e-36 138
MS.gene31082.t1 MTR_1g069735 28.652 356 223 12 12 353 115 453 6.33e-35 134
MS.gene31082.t1 MTR_1g069735 28.652 356 223 12 12 353 115 453 6.78e-35 134
MS.gene31082.t1 MTR_1g069735 28.652 356 223 12 12 353 115 453 1.25e-34 134
MS.gene31082.t1 MTR_3g104700 29.692 357 196 13 12 328 89 430 3.45e-34 133
MS.gene31082.t1 MTR_7g097150 28.609 381 218 14 12 371 115 462 5.67e-33 129
MS.gene31082.t1 MTR_1g075880 27.171 357 225 12 12 350 112 451 4.58e-32 127
MS.gene31082.t1 MTR_1g442790 29.178 353 222 13 15 352 108 447 4.60e-32 127
MS.gene31082.t1 MTR_1g442790 29.178 353 222 13 15 352 108 447 6.23e-32 127
MS.gene31082.t1 MTR_1g090917 29.091 330 184 9 8 331 47 332 2.33e-29 119
MS.gene31082.t1 MTR_1g090917 28.788 330 185 9 8 331 47 332 2.91e-29 118
MS.gene31082.t1 MTR_3g110405 28.669 293 155 7 14 301 34 277 9.19e-29 114
MS.gene31082.t1 MTR_8g035890 27.575 301 156 7 10 301 9 256 1.42e-28 113
MS.gene31082.t1 MTR_8g040300 26.821 302 159 7 10 302 3 251 2.81e-28 112
MS.gene31082.t1 MTR_3g095620 26.885 305 164 8 23 318 31 285 4.97e-27 109
MS.gene31082.t1 MTR_7g116390 28.431 306 154 9 10 301 9 263 3.36e-26 107
MS.gene31082.t1 MTR_6g087000 31.579 228 106 6 114 336 855 1037 6.10e-26 110
MS.gene31082.t1 MTR_1g080020 29.010 293 140 8 23 301 15 253 9.96e-26 105
MS.gene31082.t1 MTR_1g090917 30.864 243 127 6 93 331 2 207 2.63e-25 105
MS.gene31082.t1 MTR_1g090917 31.276 243 126 6 93 331 2 207 3.46e-25 105
MS.gene31082.t1 MTR_2g020380 27.019 322 182 10 14 332 1 272 4.60e-25 107
MS.gene31082.t1 MTR_5g045190 25.000 328 191 7 20 343 242 518 4.07e-24 104
MS.gene31082.t1 MTR_3g099920 26.625 323 180 8 1 317 1 272 4.26e-24 103
MS.gene31082.t1 MTR_2g016340 25.617 324 180 11 21 338 16 284 1.74e-22 99.0
MS.gene31082.t1 MTR_4g006970 25.231 325 185 10 1 317 1 275 6.96e-22 97.1
MS.gene31082.t1 MTR_3g466400 25.914 301 170 9 21 317 18 269 1.02e-21 96.7
MS.gene31082.t1 MTR_1g076370 27.389 314 171 11 1 305 5 270 2.06e-21 95.5
MS.gene31082.t1 MTR_8g024100 25.083 303 168 9 23 313 21 276 2.35e-21 96.3
MS.gene31082.t1 MTR_4g132070 26.899 316 152 12 21 317 95 350 7.27e-21 94.7
MS.gene31082.t1 MTR_7g113490 25.240 313 168 9 21 318 72 333 9.26e-21 94.7
MS.gene31082.t1 MTR_3g099767 25.080 311 167 9 23 324 118 371 1.76e-20 93.2
MS.gene31082.t1 MTR_6g012980 27.129 317 164 10 11 317 67 326 4.79e-20 91.7
MS.gene31082.t1 MTR_1g013700 23.944 284 169 6 21 301 17 256 5.00e-20 91.7
MS.gene31082.t1 MTR_2g078740 24.665 373 205 13 20 377 18 329 5.09e-20 92.4
MS.gene31082.t1 MTR_2g078740 27.386 241 128 6 20 259 18 212 8.34e-20 91.7
MS.gene31082.t1 MTR_2g078740 27.386 241 128 6 20 259 18 212 9.38e-20 91.7
MS.gene31082.t1 MTR_7g106710 26.948 308 158 10 23 317 141 394 1.75e-19 90.1
MS.gene31082.t1 MTR_7g106710 26.948 308 158 10 23 317 141 394 4.34e-19 89.4
MS.gene31082.t1 MTR_4g029020 23.238 383 207 13 21 384 16 330 5.78e-19 88.6
MS.gene31082.t1 MTR_8g086380 26.144 306 164 11 21 317 30 282 6.95e-19 88.6
MS.gene31082.t1 MTR_3g466480 25.559 313 163 10 21 314 25 286 8.09e-19 88.2
MS.gene31082.t1 MTR_7g106710 26.948 308 158 10 23 317 141 394 1.08e-18 88.2
MS.gene31082.t1 MTR_7g106710 27.419 310 154 11 23 317 141 394 1.32e-18 87.8
MS.gene31082.t1 MTR_1g100250 25.070 355 181 13 4 338 395 684 2.41e-18 87.4
MS.gene31082.t1 MTR_4g128820 24.179 335 192 12 13 340 6 285 3.27e-18 86.3
MS.gene31082.t1 MTR_5g075060 23.779 307 169 11 21 317 16 267 3.28e-18 86.3
MS.gene31082.t1 MTR_7g072575 24.409 254 144 6 21 271 16 224 3.28e-18 86.3
MS.gene31082.t1 MTR_5g075100 26.460 291 154 10 21 301 27 267 4.12e-18 85.9
MS.gene31082.t1 MTR_1g048630 22.667 300 179 6 20 317 10 258 4.69e-18 86.7
MS.gene31082.t1 MTR_2g100030 25.338 296 175 8 42 320 42 308 7.23e-18 85.5
MS.gene31082.t1 MTR_3g088715 39.450 109 55 3 214 317 24 126 2.03e-17 78.6
MS.gene31082.t1 MTR_1g040875 27.622 286 157 9 21 301 28 268 3.56e-17 83.2
MS.gene31082.t1 MTR_8g093730 24.843 318 170 10 13 317 295 556 4.07e-17 83.6
MS.gene31082.t1 MTR_5g067150 22.756 312 165 11 21 317 13 263 3.54e-16 79.7
MS.gene31082.t1 MTR_5g067150 22.756 312 165 11 21 317 13 263 4.02e-16 79.7
MS.gene31082.t1 MTR_3g096230 24.603 252 138 5 13 259 240 444 1.19e-15 79.0
MS.gene31082.t1 MTR_1g103760 23.664 262 150 7 21 278 16 231 1.63e-15 78.2
MS.gene31082.t1 MTR_3g096230 24.590 244 132 5 21 259 248 444 1.80e-15 78.6
MS.gene31082.t1 MTR_3g072320 25.287 261 143 7 12 268 7 219 3.44e-15 77.0
MS.gene31082.t1 MTR_1g081000 22.634 243 143 3 20 261 7 205 3.62e-15 77.4
MS.gene31082.t1 MTR_1g081000 22.634 243 143 3 20 261 7 205 3.75e-15 77.4
MS.gene31082.t1 MTR_1g105290 24.111 253 141 5 21 266 59 267 2.19e-14 75.1
MS.gene31082.t1 MTR_3g101210 23.288 292 166 6 21 300 311 556 2.20e-14 75.1
MS.gene31082.t1 MTR_1g105290 24.111 253 141 5 21 266 59 267 2.46e-14 75.1
MS.gene31082.t1 MTR_4g075410 26.667 240 127 4 23 259 26 219 2.47e-14 75.5
MS.gene31082.t1 MTR_4g075410 26.667 240 127 4 23 259 26 219 2.50e-14 75.5
MS.gene31082.t1 MTR_1g105290 24.111 253 141 5 21 266 59 267 2.58e-14 74.7
MS.gene31082.t1 MTR_3g101210 23.288 292 166 6 21 300 311 556 2.80e-14 74.7
MS.gene31082.t1 MTR_4g125800 22.491 289 161 7 42 316 40 279 3.87e-14 72.8
MS.gene31082.t1 MTR_4g074875 26.667 195 101 1 65 259 67 219 4.80e-14 74.3
MS.gene31082.t1 MTR_4g074875 26.667 195 101 1 65 259 67 219 4.82e-14 74.3
MS.gene31082.t1 MTR_4g125800 22.491 289 161 7 42 316 116 355 1.04e-13 72.4
MS.gene31082.t1 MTR_4g005830 23.390 295 164 7 17 300 84 327 1.08e-12 68.9
MS.gene31082.t1 MTR_3g076970 25.097 259 149 8 23 276 32 250 4.75e-12 67.0
MS.gene31082.t1 MTR_0464s0040 25.108 231 125 5 8 236 3 187 4.05e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31082.t1 AT3G20830 57.179 397 143 6 12 385 16 408 6.18e-147 422
MS.gene31082.t1 AT1G51170 57.825 377 135 7 7 361 13 387 1.62e-145 419
MS.gene31082.t1 AT3G25250 47.550 347 155 5 12 338 12 351 9.42e-103 310
MS.gene31082.t1 AT4G13000 44.134 358 176 6 12 358 15 359 4.81e-98 296
MS.gene31082.t1 AT5G55910 39.730 370 174 9 12 338 104 467 7.66e-77 246
MS.gene31082.t1 AT5G55910 39.730 370 174 9 12 338 104 467 7.66e-77 246
MS.gene31082.t1 AT1G16440 37.405 393 205 8 12 379 108 484 9.13e-77 246
MS.gene31082.t1 AT5G58140 40.597 335 167 6 8 332 568 880 1.34e-76 254
MS.gene31082.t1 AT5G58140 40.597 335 167 6 8 332 568 880 1.34e-76 254
MS.gene31082.t1 AT5G58140 40.597 335 167 6 8 332 568 880 1.34e-76 254
MS.gene31082.t1 AT5G58140 40.597 335 167 6 8 332 568 880 1.34e-76 254
MS.gene31082.t1 AT5G58140 40.597 335 167 6 8 332 568 880 1.34e-76 254
MS.gene31082.t1 AT1G79250 37.859 383 189 8 12 348 141 520 3.59e-76 246
MS.gene31082.t1 AT1G79250 37.859 383 189 8 12 348 141 520 3.59e-76 246
MS.gene31082.t1 AT1G79250 37.859 383 189 8 12 348 141 520 3.59e-76 246
MS.gene31082.t1 AT1G79250 37.859 383 189 8 12 348 141 520 3.59e-76 246
MS.gene31082.t1 AT3G12690 40.571 350 178 8 12 334 180 526 6.48e-76 246
MS.gene31082.t1 AT3G12690 40.571 350 178 8 12 334 180 526 6.48e-76 246
MS.gene31082.t1 AT3G12690 40.571 350 178 8 12 334 180 526 6.48e-76 246
MS.gene31082.t1 AT2G36350 40.327 367 170 8 12 334 554 915 9.27e-76 253
MS.gene31082.t1 AT5G47750 40.000 365 171 10 12 334 186 544 1.05e-75 245
MS.gene31082.t1 AT5G58140 41.033 329 162 6 8 326 568 874 1.23e-75 251
MS.gene31082.t1 AT5G40030 39.779 362 183 8 9 338 106 464 1.10e-74 240
MS.gene31082.t1 AT2G44830 41.160 362 169 10 12 334 358 714 1.84e-74 246
MS.gene31082.t1 AT2G44830 41.160 362 169 10 12 334 358 714 1.84e-74 246
MS.gene31082.t1 AT2G44830 41.160 362 169 10 12 334 358 714 1.84e-74 246
MS.gene31082.t1 AT2G34650 38.968 349 186 9 10 335 68 412 2.97e-74 238
MS.gene31082.t1 AT4G26610 39.024 369 174 9 12 338 118 477 6.80e-74 238
MS.gene31082.t1 AT3G45780 42.388 335 168 5 8 332 654 973 7.01e-73 245
MS.gene31082.t1 AT3G45780 42.388 335 168 5 8 332 654 973 7.01e-73 245
MS.gene31082.t1 AT3G52890 39.024 369 174 8 12 334 533 896 9.62e-72 241
MS.gene31082.t1 AT3G52890 39.024 369 174 8 12 334 533 896 9.62e-72 241
MS.gene31082.t1 AT3G52890 39.024 369 174 8 12 334 533 896 9.62e-72 241
MS.gene31082.t1 AT3G52890 39.024 369 174 8 12 334 533 896 9.62e-72 241
MS.gene31082.t1 AT3G44610 38.218 348 168 7 23 324 75 421 4.93e-71 229
MS.gene31082.t1 AT5G03640 39.011 364 177 8 12 334 536 895 2.18e-70 238
MS.gene31082.t1 AT5G03640 39.011 364 177 8 12 334 536 895 2.18e-70 238
MS.gene31082.t1 AT3G27580 37.396 361 184 7 12 334 177 533 2.83e-69 228
MS.gene31082.t1 AT3G27580 37.396 361 184 7 12 334 177 533 2.83e-69 228
MS.gene31082.t1 AT1G53700 38.053 339 201 5 3 333 79 416 3.07e-67 220
MS.gene31082.t1 AT3G14370 37.681 345 180 7 8 330 79 410 2.30e-64 213
MS.gene31082.t1 AT3G08720 31.496 381 196 9 2 375 123 445 2.80e-51 178
MS.gene31082.t1 AT3G08720 31.496 381 196 9 2 375 123 445 2.80e-51 178
MS.gene31082.t1 AT3G08720 31.496 381 196 9 2 375 123 445 2.80e-51 178
MS.gene31082.t1 AT3G08720 31.496 381 196 9 2 375 123 445 2.80e-51 178
MS.gene31082.t1 AT3G08730 31.751 337 177 7 12 343 129 417 6.77e-50 174
MS.gene31082.t1 AT3G08730 31.751 337 177 7 12 343 129 417 6.77e-50 174
MS.gene31082.t1 AT1G45160 33.735 332 187 10 12 334 665 972 1.93e-44 165
MS.gene31082.t1 AT1G45160 33.735 332 187 10 12 334 665 972 2.41e-44 164
MS.gene31082.t1 AT3G17850 30.571 350 197 11 3 335 869 1189 3.22e-44 164
MS.gene31082.t1 AT1G48490 29.730 333 205 7 12 338 823 1132 3.70e-43 161
MS.gene31082.t1 AT1G48490 29.730 333 205 7 12 338 823 1132 3.70e-43 161
MS.gene31082.t1 AT1G48490 29.730 333 205 7 12 338 823 1132 3.70e-43 161
MS.gene31082.t1 AT1G48490 29.730 333 205 7 12 338 824 1133 3.85e-43 161
MS.gene31082.t1 AT5G62310 29.545 352 200 9 3 335 739 1061 7.26e-43 160
MS.gene31082.t1 AT3G10540 30.625 320 178 7 21 334 49 330 5.43e-41 151
MS.gene31082.t1 AT2G19400 31.657 338 199 11 12 328 100 426 6.78e-41 151
MS.gene31082.t1 AT1G30640 30.612 343 207 11 10 335 20 348 5.90e-39 145
MS.gene31082.t1 AT5G04510 29.688 320 181 7 21 334 48 329 1.04e-38 143
MS.gene31082.t1 AT1G30640 30.612 343 207 11 10 335 113 441 2.35e-38 145
MS.gene31082.t1 AT1G30640 30.612 343 207 11 10 335 113 441 2.35e-38 145
MS.gene31082.t1 AT5G04510 29.688 320 181 7 21 334 48 329 3.16e-38 144
MS.gene31082.t1 AT2G26700 45.570 158 84 1 12 167 82 239 1.84e-37 142
MS.gene31082.t1 AT2G26700 45.890 146 68 3 215 350 354 498 9.57e-32 126
MS.gene31082.t1 AT4G33080 28.783 337 209 8 12 328 89 414 4.41e-36 138
MS.gene31082.t1 AT4G33080 28.783 337 209 8 12 328 89 414 4.83e-36 138
MS.gene31082.t1 AT5G09890 28.916 332 209 9 12 328 97 416 6.87e-36 137
MS.gene31082.t1 AT5G09890 28.916 332 209 9 12 328 97 416 7.24e-36 137
MS.gene31082.t1 AT3G23310 28.307 378 229 14 12 370 115 469 1.02e-34 135
MS.gene31082.t1 AT4G14350 28.647 377 227 14 12 370 114 466 2.12e-33 131
MS.gene31082.t1 AT4G14350 28.647 377 227 14 12 370 114 466 2.13e-33 131
MS.gene31082.t1 AT4G14350 28.647 377 227 14 12 370 114 466 2.13e-33 131
MS.gene31082.t1 AT4G14350 28.647 377 227 14 12 370 114 466 2.13e-33 131
MS.gene31082.t1 AT2G45490 29.758 289 139 6 23 301 28 262 5.34e-32 122
MS.gene31082.t1 AT5G04510 30.216 278 151 8 21 293 48 287 1.52e-31 122
MS.gene31082.t1 AT1G03920 27.874 348 207 12 12 338 19 343 2.57e-31 124
MS.gene31082.t1 AT1G03920 27.874 348 207 12 12 338 132 456 6.92e-31 124
MS.gene31082.t1 AT1G03920 27.874 348 207 12 12 338 132 456 6.92e-31 124
MS.gene31082.t1 AT2G45490 27.178 287 153 5 2 286 7 239 1.97e-28 112
MS.gene31082.t1 AT2G20470 26.513 347 212 11 12 338 119 442 4.49e-28 115
MS.gene31082.t1 AT2G20470 26.513 347 212 11 12 338 119 442 4.49e-28 115
MS.gene31082.t1 AT2G20470 26.513 347 212 11 12 338 119 442 4.57e-28 115
MS.gene31082.t1 AT2G20050 31.111 225 106 4 117 336 877 1057 3.78e-27 114
MS.gene31082.t1 AT2G20050 31.111 225 106 4 117 336 880 1060 3.89e-27 114
MS.gene31082.t1 AT2G25880 27.526 287 154 7 21 302 29 266 1.77e-26 107
MS.gene31082.t1 AT2G25880 27.526 287 154 7 21 302 42 279 2.68e-26 107
MS.gene31082.t1 AT4G32830 28.322 286 151 7 21 301 35 271 2.88e-26 107
MS.gene31082.t1 AT2G25880 27.526 287 154 7 21 302 90 327 9.15e-26 107
MS.gene31082.t1 AT5G18700 27.744 328 176 10 14 338 1 270 2.02e-25 108
MS.gene31082.t1 AT4G18700 27.532 316 172 10 8 317 17 281 4.39e-24 103
MS.gene31082.t1 AT4G04720 26.814 317 153 12 21 318 84 340 9.89e-24 103
MS.gene31082.t1 AT4G04720 26.814 317 153 12 21 318 84 340 9.89e-24 103
MS.gene31082.t1 AT4G29810 27.217 327 175 9 3 317 56 331 7.09e-23 99.0
MS.gene31082.t1 AT4G29810 27.217 327 175 9 3 317 65 340 8.78e-23 99.0
MS.gene31082.t1 AT4G29810 27.097 310 167 8 3 300 65 327 2.02e-21 94.7
MS.gene31082.t1 AT1G29230 26.623 308 166 10 3 301 61 317 2.47e-21 95.9
MS.gene31082.t1 AT3G50530 27.852 298 175 11 23 301 154 430 5.58e-21 95.1
MS.gene31082.t1 AT1G69220 26.360 239 131 4 20 258 252 445 6.14e-21 95.5
MS.gene31082.t1 AT3G06030 26.250 320 163 10 21 322 72 336 6.39e-21 95.1
MS.gene31082.t1 AT5G25110 24.561 285 166 7 21 301 47 286 6.94e-21 94.4
MS.gene31082.t1 AT4G26070 25.382 327 179 8 4 317 42 316 1.10e-20 92.4
MS.gene31082.t1 AT4G26070 25.382 327 179 8 4 317 55 329 1.45e-20 92.4
MS.gene31082.t1 AT4G26070 25.382 327 179 8 4 317 55 329 1.45e-20 92.4
MS.gene31082.t1 AT4G26070 25.382 327 179 8 4 317 54 328 1.63e-20 92.0
MS.gene31082.t1 AT1G12680 24.415 299 159 9 23 313 113 352 2.28e-20 92.8
MS.gene31082.t1 AT1G69220 25.490 255 145 4 4 258 209 418 3.64e-20 93.2
MS.gene31082.t1 AT3G15220 25.360 347 187 12 20 352 18 306 4.92e-20 92.4
MS.gene31082.t1 AT2G34180 25.697 323 183 12 2 317 40 312 6.04e-20 91.7
MS.gene31082.t1 AT1G54960 25.794 252 136 5 21 265 72 279 9.38e-20 91.7
MS.gene31082.t1 AT1G54960 25.794 252 136 5 21 265 72 279 9.38e-20 91.7
MS.gene31082.t1 AT5G45810 25.581 301 165 9 10 301 21 271 1.61e-19 90.5
MS.gene31082.t1 AT5G10930 23.776 286 168 7 21 301 16 256 1.80e-19 90.1
MS.gene31082.t1 AT2G30360 26.923 286 160 10 21 301 25 266 1.95e-19 89.7
MS.gene31082.t1 AT4G21940 26.183 317 155 12 21 318 106 362 2.06e-19 90.1
MS.gene31082.t1 AT2G26980 25.688 327 173 12 21 338 18 283 2.10e-19 89.4
MS.gene31082.t1 AT4G21940 26.183 317 155 12 21 318 106 362 2.28e-19 90.1
MS.gene31082.t1 AT2G26980 25.688 327 173 12 21 338 18 283 2.45e-19 89.4
MS.gene31082.t1 AT5G45820 25.510 294 152 10 21 301 16 255 2.52e-19 89.7
MS.gene31082.t1 AT4G21940 26.183 317 155 12 21 318 106 362 2.58e-19 90.1
MS.gene31082.t1 AT1G09000 25.397 252 137 5 21 265 73 280 2.96e-19 90.1
MS.gene31082.t1 AT2G26980 25.688 327 173 12 21 338 28 293 3.38e-19 89.4
MS.gene31082.t1 AT2G26980 25.688 327 173 12 21 338 18 283 3.53e-19 89.4
MS.gene31082.t1 AT1G09000 25.000 252 138 4 21 265 73 280 3.98e-19 89.7
MS.gene31082.t1 AT5G01810 24.370 357 202 11 21 357 16 324 8.16e-19 87.8
MS.gene31082.t1 AT5G01810 24.370 357 202 11 21 357 16 324 8.16e-19 87.8
MS.gene31082.t1 AT5G01810 25.263 285 164 9 21 301 16 255 1.02e-18 87.4
MS.gene31082.t1 AT1G50240 22.549 306 184 6 20 323 9 263 1.12e-18 88.6
MS.gene31082.t1 AT1G50240 22.549 306 184 6 20 323 9 263 1.12e-18 88.6
MS.gene31082.t1 AT4G26070 26.667 270 149 5 4 271 55 277 1.97e-18 85.5
MS.gene31082.t1 AT1G53165 25.369 339 181 12 20 344 18 298 1.99e-18 87.8
MS.gene31082.t1 AT1G53165 25.369 339 181 12 20 344 18 298 2.02e-18 87.4
MS.gene31082.t1 AT1G53165 25.369 339 181 12 20 344 18 298 2.20e-18 87.4
MS.gene31082.t1 AT3G04530 25.338 296 166 7 15 301 9 258 2.44e-18 84.7
MS.gene31082.t1 AT4G23650 26.115 314 153 11 23 317 84 337 3.26e-18 86.7
MS.gene31082.t1 AT1G08650 26.471 306 167 8 8 301 3 262 8.57e-18 83.2
MS.gene31082.t1 AT1G08650 26.471 306 167 8 8 301 3 262 1.18e-17 82.8
MS.gene31082.t1 AT4G14580 24.474 380 215 12 1 359 1 329 1.81e-17 84.0
MS.gene31082.t1 AT2G26980 25.784 287 155 10 21 298 18 255 1.84e-17 82.0
MS.gene31082.t1 AT2G17890 26.531 294 155 10 21 301 112 357 2.67e-17 84.0
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 2.92e-17 84.0
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT4G04740 25.830 271 132 9 62 318 114 329 3.22e-17 83.6
MS.gene31082.t1 AT5G14720 25.490 255 136 5 12 259 11 218 7.23e-17 82.8
MS.gene31082.t1 AT5G14720 25.490 255 136 5 12 259 11 218 7.23e-17 82.8
MS.gene31082.t1 AT1G63700 25.994 327 160 12 21 330 404 665 1.48e-16 82.0
MS.gene31082.t1 AT1G63700 25.994 327 160 12 21 330 404 665 1.48e-16 82.0
MS.gene31082.t1 AT1G18350 22.022 277 160 7 3 272 30 257 4.95e-16 78.6
MS.gene31082.t1 AT2G38490 25.306 245 137 7 21 263 32 232 1.62e-15 78.2
MS.gene31082.t1 AT1G53570 24.390 328 171 11 5 317 206 471 1.68e-15 78.6
MS.gene31082.t1 AT1G53570 24.390 328 171 11 5 317 206 471 1.69e-15 78.6
MS.gene31082.t1 AT1G53570 24.390 328 171 11 5 317 206 471 1.89e-15 78.6
MS.gene31082.t1 AT1G53570 24.390 328 171 11 5 317 206 471 1.89e-15 78.6
MS.gene31082.t1 AT4G30960 22.968 283 173 5 21 301 28 267 1.91e-15 77.8
MS.gene31082.t1 AT1G53570 25.194 258 141 7 5 259 206 414 2.21e-15 78.2
MS.gene31082.t1 AT1G53570 25.194 258 141 7 5 259 206 414 2.27e-15 78.2
MS.gene31082.t1 AT3G04810 24.400 250 142 6 14 261 1 205 2.32e-15 78.2
MS.gene31082.t1 AT3G04810 24.400 250 142 6 14 261 1 205 2.32e-15 78.2
MS.gene31082.t1 AT3G04810 24.400 250 142 6 14 261 1 205 2.32e-15 78.2
MS.gene31082.t1 AT5G28290 23.457 243 141 4 20 261 7 205 4.86e-15 77.0
MS.gene31082.t1 AT3G23000 25.141 354 193 15 23 359 31 329 4.91e-15 76.6
MS.gene31082.t1 AT5G28290 23.457 243 141 4 20 261 7 205 5.20e-15 77.0
MS.gene31082.t1 AT5G28290 23.457 243 141 4 20 261 7 205 5.20e-15 77.0
MS.gene31082.t1 AT5G07070 23.228 254 147 7 21 271 16 224 1.01e-14 75.9
MS.gene31082.t1 AT1G73500 23.175 315 176 8 16 317 46 307 1.58e-14 74.3
MS.gene31082.t1 AT3G13530 26.667 240 127 4 23 259 26 219 5.87e-14 74.3
MS.gene31082.t1 AT1G32320 25.157 318 167 11 13 317 44 303 6.12e-14 72.4
MS.gene31082.t1 AT3G07980 25.523 239 131 4 23 259 26 219 1.38e-13 73.2
MS.gene31082.t1 AT3G07980 25.523 239 131 4 23 259 26 219 1.65e-13 72.8
MS.gene31082.t1 AT1G51660 22.697 304 171 7 23 316 85 334 1.48e-12 68.9
MS.gene31082.t1 AT1G07150 25.243 309 160 13 22 316 14 265 2.31e-12 68.6
MS.gene31082.t1 AT2G25880 33.333 99 63 1 207 302 136 234 3.72e-12 66.2
MS.gene31082.t1 AT1G07150 25.243 309 160 13 22 316 28 279 4.45e-12 67.8
MS.gene31082.t1 AT5G58140 30.172 116 77 2 8 121 568 681 1.00e-10 63.9

Find 98 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGGGAAAACACCGTTTA+AGG 0.214990 2.4:+5819861 MS.gene31082:CDS
TTTGAAACGGCTCAGTTAAT+TGG 0.230681 2.4:+5819352 MS.gene31082:CDS
TGTTTAACGGCGGGTGAATT+TGG 0.254729 2.4:+5820120 MS.gene31082:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2.4:-5819784 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2.4:-5819135 None:intergenic
CTCCCAACGGGCTCGACGTT+CGG 0.347912 2.4:-5819275 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2.4:+5819541 MS.gene31082:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2.4:-5819783 None:intergenic
AGATCACCTCCTGAGCAATA+TGG 0.363728 2.4:-5819385 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2.4:+5819919 MS.gene31082:CDS
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2.4:+5820014 MS.gene31082:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2.4:-5819121 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2.4:-5819874 None:intergenic
TATGGGAAAACACCGTTTAA+GGG 0.398885 2.4:+5819862 MS.gene31082:CDS
CGCCGAACGTCGAGCCCGTT+GGG 0.404219 2.4:+5819273 MS.gene31082:CDS
TCCATTCCTCCCATCCATCC+TGG 0.408154 2.4:+5819324 MS.gene31082:CDS
TGGAAGGAAAACACCGTTAA+CGG 0.421316 2.4:+5819939 MS.gene31082:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2.4:+5819151 MS.gene31082:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2.4:+5819985 MS.gene31082:CDS
CGTTCGATCAAATCCGTTAA+CGG 0.430561 2.4:-5819952 None:intergenic
TTAAGCTACGAGATGTTGTA+TGG 0.433577 2.4:+5819844 MS.gene31082:CDS
CCTTGCCGTCGTCGCCGTTA+CGG 0.459014 2.4:+5820190 MS.gene31082:CDS
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2.4:+5819742 MS.gene31082:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2.4:+5819594 MS.gene31082:CDS
AAACGGCTCAGTTAATTGGC+TGG 0.467130 2.4:+5819356 MS.gene31082:CDS
TCAAAGTTGCCCAGGATGGA+TGG 0.472882 2.4:-5819334 None:intergenic
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2.4:-5819423 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2.4:-5819706 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2.4:+5819166 MS.gene31082:CDS
CCCAGGATGGATGGGAGGAA+TGG 0.499957 2.4:-5819325 None:intergenic
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2.4:-5819991 None:intergenic
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2.4:+5820056 MS.gene31082:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2.4:+5819165 MS.gene31082:CDS
TCATCTCTCGACGGGATAAA+CGG 0.515767 2.4:-5820093 None:intergenic
TTAACGGCGGGTGAATTTGG+TGG 0.515774 2.4:+5820123 MS.gene31082:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2.4:-5819459 None:intergenic
AACGGCTCAGTTAATTGGCT+GGG 0.516902 2.4:+5819357 MS.gene31082:CDS
CAAAGTTGCCCAGGATGGAT+GGG 0.520980 2.4:-5819333 None:intergenic
TGCGCTCCGTTACCAACAAA+CGG 0.524239 2.4:+5819411 MS.gene31082:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2.4:+5819997 MS.gene31082:CDS
GAGAGATGACAGATGTTTAA+CGG 0.529767 2.4:+5820107 MS.gene31082:CDS
AACATCTGTCATCTCTCGAC+GGG 0.532395 2.4:-5820101 None:intergenic
TAAGACGTCGATCTCCCAAC+GGG 0.538002 2.4:-5819287 None:intergenic
GAGGAATGGATGTGATAAAG+TGG 0.538669 2.4:-5819311 None:intergenic
GAGCCGTTTCAAAGTTGCCC+AGG 0.539709 2.4:-5819342 None:intergenic
CATCCTGGGCAACTTTGAAA+CGG 0.540547 2.4:+5819339 MS.gene31082:CDS
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2.4:+5819765 MS.gene31082:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2.4:+5819966 MS.gene31082:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2.4:-5819417 None:intergenic
GGACTAATTCGACGATTGAG+TGG 0.549952 2.4:-5819685 None:intergenic
CCATTCCTCCCATCCATCCT+GGG 0.550555 2.4:+5819325 MS.gene31082:CDS
TGGGCCGTTCCATATTGCTC+AGG 0.553646 2.4:+5819376 MS.gene31082:CDS
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2.4:+5819923 MS.gene31082:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2.4:+5819994 MS.gene31082:CDS
GATGACAGATGTTTAACGGC+GGG 0.554752 2.4:+5820111 MS.gene31082:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2.4:-5819233 None:intergenic
CTCAACGTAAAACTCGGCTA+TGG 0.558023 2.4:+5819656 MS.gene31082:CDS
ACGTTCGGCGTCGTGTGTGG+AGG 0.558783 2.4:-5819260 None:intergenic
GTGGATTCTGCTATCTTCGA+CGG 0.561764 2.4:-5819629 None:intergenic
GGCGGGTGAATTTGGTGGAG+TGG 0.562495 2.4:+5820128 MS.gene31082:CDS
CGTTTCAAAGTTGCCCAGGA+TGG 0.564263 2.4:-5819338 None:intergenic
ACTCAATCGTCGAATTAGTC+CGG 0.566855 2.4:+5819687 MS.gene31082:CDS
TCGACGTTCGGCGTCGTGTG+TGG 0.568999 2.4:-5819263 None:intergenic
AAATGTTGACGGAGGTTGAA+CGG 0.573624 2.4:+5820067 MS.gene31082:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2.4:+5819700 MS.gene31082:CDS
ACGCCGAACGTCGAGCCCGT+TGG 0.575774 2.4:+5819272 MS.gene31082:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2.4:-5819141 None:intergenic
TAAGCTACGAGATGTTGTAT+GGG 0.582681 2.4:+5819845 MS.gene31082:CDS
GGTGACCGTAACGGCGACGA+CGG 0.585676 2.4:-5820195 None:intergenic
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2.4:+5819784 MS.gene31082:CDS
GGCGACGACGGCAAGGACGA+CGG 0.589903 2.4:-5820183 None:intergenic
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2.4:-5819782 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2.4:+5819157 MS.gene31082:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2.4:+5819863 MS.gene31082:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2.4:+5819490 MS.gene31082:CDS
TCTTGAACATCTTCATACCA+TGG 0.599326 2.4:+5819489 MS.gene31082:CDS
GCCGTTCCATATTGCTCAGG+AGG 0.603060 2.4:+5819379 MS.gene31082:CDS
CGTTAACGGATTTGATCGAA+CGG 0.605793 2.4:+5819953 MS.gene31082:CDS
ACGAATCTCAACGTAAAACT+CGG 0.610350 2.4:+5819650 MS.gene31082:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2.4:-5819564 None:intergenic
ACCTCCTGAGCAATATGGAA+CGG 0.615838 2.4:-5819380 None:intergenic
AAACATCTGTCATCTCTCGA+CGG 0.616411 2.4:-5820102 None:intergenic
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2.4:-5819112 None:intergenic
CCGTAACGGCGACGACGGCA+AGG 0.635063 2.4:-5820190 None:intergenic
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2.4:-5819795 None:intergenic
TCAGACGACGGTGACCGTAA+CGG 0.637892 2.4:-5820204 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2.4:-5819435 None:intergenic
CTATCTTCAAACTCAGACGA+CGG 0.644976 2.4:-5820216 None:intergenic
ATAAGACGTCGATCTCCCAA+CGG 0.650869 2.4:-5819288 None:intergenic
AGTTGCCCAGGATGGATGGG+AGG 0.654044 2.4:-5819330 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2.4:+5819778 MS.gene31082:CDS
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2.4:+5819718 MS.gene31082:CDS
GTCACGATAAGCTATGCCCA+TGG 0.680568 2.4:-5819506 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2.4:-5819230 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2.4:+5820059 MS.gene31082:CDS
CAACAACGTTAACACCACCA+TGG 0.701516 2.4:+5819216 MS.gene31082:CDS
AGATGACAGATGTTTAACGG+CGG 0.727423 2.4:+5820110 MS.gene31082:CDS
TCTCTCGACGGGATAAACGG+CGG 0.747082 2.4:-5820090 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACGTTCTTATTCAACAATC+TGG + chr2.4:5819541-5819560 MS.gene31082:CDS 30.0%
ACGTAAACTTTCACACAAAA+CGG + chr2.4:5819594-5819613 MS.gene31082:CDS 30.0%
CTCAAACCACTCAAAATATT+AGG + chr2.4:5819151-5819170 MS.gene31082:CDS 30.0%
TTCAAGAAGCTTGAATTTGT+TGG + chr2.4:5819919-5819938 MS.gene31082:CDS 30.0%
TTCTTATTCTTCCCCTTAAA+CGG - chr2.4:5819877-5819896 None:intergenic 30.0%
! TGTTGAATAAGAACGTTTTC+TGG - chr2.4:5819538-5819557 None:intergenic 30.0%
!! ATGAATTCGCAGTTGATTTT+TGG + chr2.4:5819809-5819828 MS.gene31082:CDS 30.0%
!! CTAATATTTTGAGTGGTTTG+AGG - chr2.4:5819153-5819172 None:intergenic 30.0%
!! TGAATTCGCAGTTGATTTTT+GGG + chr2.4:5819810-5819829 MS.gene31082:CDS 30.0%
!!! AGTTTTTTAGAGGGGTAAAA+TGG + chr2.4:5820043-5820062 MS.gene31082:CDS 30.0%
!!! GTTTTTTAGAGGGGTAAAAT+GGG + chr2.4:5820044-5820063 MS.gene31082:CDS 30.0%
!!! TAACGTTGTTGTTGTTTTGT+TGG - chr2.4:5819207-5819226 None:intergenic 30.0%
!!! TAAGAACGTTTTCTGGTTTA+AGG - chr2.4:5819531-5819550 None:intergenic 30.0%
AAGGATCCATTGAAGAGATT+AGG + chr2.4:5819985-5820004 MS.gene31082:CDS 35.0%
AATATTAGGCAAAGGAGCAA+TGG + chr2.4:5819165-5819184 MS.gene31082:CDS 35.0%
ACGAATCTCAACGTAAAACT+CGG + chr2.4:5819650-5819669 MS.gene31082:CDS 35.0%
ACGTAACCTAATCTCTTCAA+TGG - chr2.4:5819994-5820013 None:intergenic 35.0%
ATATTAGGCAAAGGAGCAAT+GGG + chr2.4:5819166-5819185 MS.gene31082:CDS 35.0%
CCACTCAAAATATTAGGCAA+AGG + chr2.4:5819157-5819176 MS.gene31082:CDS 35.0%
CTTGAACATCTTCATACCAT+GGG + chr2.4:5819490-5819509 MS.gene31082:CDS 35.0%
GAAAAGTCTAACTCGTTTGT+TGG + chr2.4:5819742-5819761 MS.gene31082:CDS 35.0%
GAATCTCTGCTATGTAGAAA+CGG - chr2.4:5819462-5819481 None:intergenic 35.0%
GAGAGATGACAGATGTTTAA+CGG + chr2.4:5820107-5820126 MS.gene31082:CDS 35.0%
GGTAAAATGGGAAATGTTGA+CGG + chr2.4:5820056-5820075 MS.gene31082:CDS 35.0%
TAAGCTACGAGATGTTGTAT+GGG + chr2.4:5819845-5819864 MS.gene31082:CDS 35.0%
TATGGGAAAACACCGTTTAA+GGG + chr2.4:5819862-5819881 MS.gene31082:CDS 35.0%
TCTTGAACATCTTCATACCA+TGG + chr2.4:5819489-5819508 MS.gene31082:CDS 35.0%
TGGAGGAGCTAATGAAATTA+AGG + chr2.4:5820014-5820033 MS.gene31082:CDS 35.0%
TTAAGCTACGAGATGTTGTA+TGG + chr2.4:5819844-5819863 MS.gene31082:CDS 35.0%
TTGAAGAGATTAGGTTACGT+TGG + chr2.4:5819994-5820013 MS.gene31082:CDS 35.0%
! TTTGAAACGGCTCAGTTAAT+TGG + chr2.4:5819352-5819371 MS.gene31082:CDS 35.0%
!! AGAAGCTTGAATTTGTTGGA+AGG + chr2.4:5819923-5819942 MS.gene31082:CDS 35.0%
!! CCTTTGCCTAATATTTTGAG+TGG - chr2.4:5819160-5819179 None:intergenic 35.0%
!! GTTTTGTTGGATGAGGAAAA+CGG - chr2.4:5819194-5819213 None:intergenic 35.0%
!!! AAGGAGCATGAGTTTTTTAG+AGG + chr2.4:5820033-5820052 MS.gene31082:CDS 35.0%
!!! AGGAGCATGAGTTTTTTAGA+GGG + chr2.4:5820034-5820053 MS.gene31082:CDS 35.0%
!!! TGTTGTTGTTTTGTTGGATG+AGG - chr2.4:5819201-5819220 None:intergenic 35.0%
AAAATGGGAAATGTTGACGG+AGG + chr2.4:5820059-5820078 MS.gene31082:CDS 40.0%
AAACATCTGTCATCTCTCGA+CGG - chr2.4:5820105-5820124 None:intergenic 40.0%
AAATGTTGACGGAGGTTGAA+CGG + chr2.4:5820067-5820086 MS.gene31082:CDS 40.0%
AAGAGATTAGGTTACGTTGG+AGG + chr2.4:5819997-5820016 MS.gene31082:CDS 40.0%
ACTCAATCGTCGAATTAGTC+CGG + chr2.4:5819687-5819706 MS.gene31082:CDS 40.0%
AGATGACAGATGTTTAACGG+CGG + chr2.4:5820110-5820129 MS.gene31082:CDS 40.0%
ATGGGAAAACACCGTTTAAG+GGG + chr2.4:5819863-5819882 MS.gene31082:CDS 40.0%
CGTTCGATCAAATCCGTTAA+CGG - chr2.4:5819955-5819974 None:intergenic 40.0%
CTATCTTCAAACTCAGACGA+CGG - chr2.4:5820219-5820238 None:intergenic 40.0%
GAGGAATGGATGTGATAAAG+TGG - chr2.4:5819314-5819333 None:intergenic 40.0%
GTATGGGAAAACACCGTTTA+AGG + chr2.4:5819861-5819880 MS.gene31082:CDS 40.0%
TCTTGTGTACTAGGTGATGT+TGG - chr2.4:5819115-5819134 None:intergenic 40.0%
TGGAAGGAAAACACCGTTAA+CGG + chr2.4:5819939-5819958 MS.gene31082:CDS 40.0%
! AGGTTAAGGTCTTGTGTACT+AGG - chr2.4:5819124-5819143 None:intergenic 40.0%
! GAGTTTTACGTTGAGATTCG+TGG - chr2.4:5819651-5819670 None:intergenic 40.0%
! GTTTGAGGTTGTTGAGGTTA+AGG - chr2.4:5819138-5819157 None:intergenic 40.0%
! TTGCTGTTGTTGAGAAGACA+CGG - chr2.4:5819438-5819457 None:intergenic 40.0%
!! CGTTAACGGATTTGATCGAA+CGG + chr2.4:5819953-5819972 MS.gene31082:CDS 40.0%
!!! GGAGCATGAGTTTTTTAGAG+GGG + chr2.4:5820035-5820054 MS.gene31082:CDS 40.0%
AAACGGCTCAGTTAATTGGC+TGG + chr2.4:5819356-5819375 MS.gene31082:CDS 45.0%
AACATCTGTCATCTCTCGAC+GGG - chr2.4:5820104-5820123 None:intergenic 45.0%
AACGGCTCAGTTAATTGGCT+GGG + chr2.4:5819357-5819376 MS.gene31082:CDS 45.0%
AACTACTTTGAGTGCCATGG+TGG - chr2.4:5819233-5819252 None:intergenic 45.0%
ACCTCCTGAGCAATATGGAA+CGG - chr2.4:5819383-5819402 None:intergenic 45.0%
AGATCACCTCCTGAGCAATA+TGG - chr2.4:5819388-5819407 None:intergenic 45.0%
ATAAGACGTCGATCTCCCAA+CGG - chr2.4:5819291-5819310 None:intergenic 45.0%
CAACAACGTTAACACCACCA+TGG + chr2.4:5819216-5819235 MS.gene31082:CDS 45.0%
CGAAATCAGTTAACGTGACG+TGG - chr2.4:5819567-5819586 None:intergenic 45.0%
CTCAACGTAAAACTCGGCTA+TGG + chr2.4:5819656-5819675 MS.gene31082:CDS 45.0%
GATCGAACGGTTGTTAGAGA+AGG + chr2.4:5819966-5819985 MS.gene31082:CDS 45.0%
GATGACAGATGTTTAACGGC+GGG + chr2.4:5820111-5820130 MS.gene31082:CDS 45.0%
GGACTAATTCGACGATTGAG+TGG - chr2.4:5819688-5819707 None:intergenic 45.0%
GTCAACTACTTTGAGTGCCA+TGG - chr2.4:5819236-5819255 None:intergenic 45.0%
GTGGATTCTGCTATCTTCGA+CGG - chr2.4:5819632-5819651 None:intergenic 45.0%
TCATCTCTCGACGGGATAAA+CGG - chr2.4:5820096-5820115 None:intergenic 45.0%
TGTTTAACGGCGGGTGAATT+TGG + chr2.4:5820120-5820139 MS.gene31082:CDS 45.0%
! CATCCTGGGCAACTTTGAAA+CGG + chr2.4:5819339-5819358 MS.gene31082:CDS 45.0%
! CGAGTTAGACTTTTCACCGT+CGG - chr2.4:5819737-5819756 None:intergenic 45.0%
! TGAGTGGTTTGAGGTTGTTG+AGG - chr2.4:5819144-5819163 None:intergenic 45.0%
!! GCAGTTGATTTTTGGGCTCT+TGG + chr2.4:5819817-5819836 MS.gene31082:CDS 45.0%
AGAAGACACGGTCCGTTTGT+TGG - chr2.4:5819426-5819445 None:intergenic 50.0%
CAAAGTTGCCCAGGATGGAT+GGG - chr2.4:5819336-5819355 None:intergenic 50.0%
CGTTTCAAAGTTGCCCAGGA+TGG - chr2.4:5819341-5819360 None:intergenic 50.0%
GTCACGATAAGCTATGCCCA+TGG - chr2.4:5819509-5819528 None:intergenic 50.0%
TAAGACGTCGATCTCCCAAC+GGG - chr2.4:5819290-5819309 None:intergenic 50.0%
TCAAAGTTGCCCAGGATGGA+TGG - chr2.4:5819337-5819356 None:intergenic 50.0%
TGCGCTCCGTTACCAACAAA+CGG + chr2.4:5819411-5819430 MS.gene31082:CDS 50.0%
TTAACGGCGGGTGAATTTGG+TGG + chr2.4:5820123-5820142 MS.gene31082:CDS 50.0%
! CACGGTCCGTTTGTTGGTAA+CGG - chr2.4:5819420-5819439 None:intergenic 50.0%
! CGTGGATTGAGTTTCTCCGA+CGG + chr2.4:5819718-5819737 MS.gene31082:CDS 50.0%
ATTAGTCCGGTGAGTCGTCG+TGG + chr2.4:5819700-5819719 MS.gene31082:CDS 55.0%
CCATTCCTCCCATCCATCCT+GGG + chr2.4:5819325-5819344 MS.gene31082:CDS 55.0%
CTCAATCCACGACGACTCAC+CGG - chr2.4:5819709-5819728 None:intergenic 55.0%
GAGCCGTTTCAAAGTTGCCC+AGG - chr2.4:5819345-5819364 None:intergenic 55.0%
GCCGTTCCATATTGCTCAGG+AGG + chr2.4:5819379-5819398 MS.gene31082:CDS 55.0%
TCAGACGACGGTGACCGTAA+CGG - chr2.4:5820207-5820226 None:intergenic 55.0%
TCCATTCCTCCCATCCATCC+TGG + chr2.4:5819324-5819343 MS.gene31082:CDS 55.0%
TCTCTCGACGGGATAAACGG+CGG - chr2.4:5820093-5820112 None:intergenic 55.0%
TGGGCCGTTCCATATTGCTC+AGG + chr2.4:5819376-5819395 MS.gene31082:CDS 55.0%
AGTTGCCCAGGATGGATGGG+AGG - chr2.4:5819333-5819352 None:intergenic 60.0%
CCCAGGATGGATGGGAGGAA+TGG - chr2.4:5819328-5819347 None:intergenic 60.0%
CGAATTCATGTCCGTCGCCG+CGG - chr2.4:5819798-5819817 None:intergenic 60.0%
! GGCGGGTGAATTTGGTGGAG+TGG + chr2.4:5820128-5820147 MS.gene31082:CDS 60.0%
ACGTTCGGCGTCGTGTGTGG+AGG - chr2.4:5819263-5819282 None:intergenic 65.0%
CACAGCAGAGTACGTCGCCC+CGG + chr2.4:5819765-5819784 MS.gene31082:CDS 65.0%
CCGGAAGTAATCCGCGGCGA+CGG + chr2.4:5819784-5819803 MS.gene31082:CDS 65.0%
CCTTGCCGTCGTCGCCGTTA+CGG + chr2.4:5820190-5820209 MS.gene31082:CDS 65.0%
GGTGACCGTAACGGCGACGA+CGG - chr2.4:5820198-5820217 None:intergenic 65.0%
GTCGCCCCGGAAGTAATCCG+CGG + chr2.4:5819778-5819797 MS.gene31082:CDS 65.0%
TCGACGTTCGGCGTCGTGTG+TGG - chr2.4:5819266-5819285 None:intergenic 65.0%
! CCGTCGCCGCGGATTACTTC+CGG - chr2.4:5819787-5819806 None:intergenic 65.0%
! CGTCGCCGCGGATTACTTCC+GGG - chr2.4:5819786-5819805 None:intergenic 65.0%
! CTCCCAACGGGCTCGACGTT+CGG - chr2.4:5819278-5819297 None:intergenic 65.0%
! GTCGCCGCGGATTACTTCCG+GGG - chr2.4:5819785-5819804 None:intergenic 65.0%
ACGCCGAACGTCGAGCCCGT+TGG + chr2.4:5819272-5819291 MS.gene31082:CDS 70.0%
CCGTAACGGCGACGACGGCA+AGG - chr2.4:5820193-5820212 None:intergenic 70.0%
CGCCGAACGTCGAGCCCGTT+GGG + chr2.4:5819273-5819292 MS.gene31082:CDS 70.0%
GGCGACGACGGCAAGGACGA+CGG - chr2.4:5820186-5820205 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 5819103 5820260 5819103 ID=MS.gene31082
chr2.4 mRNA 5819103 5820260 5819103 ID=MS.gene31082.t1;Parent=MS.gene31082
chr2.4 exon 5819103 5820260 5819103 ID=MS.gene31082.t1.exon1;Parent=MS.gene31082.t1
chr2.4 CDS 5819103 5820260 5819103 ID=cds.MS.gene31082.t1;Parent=MS.gene31082.t1
Gene Sequence

>MS.gene31082

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACAACGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACACGACGCCGAACGTCGAGCCCGTTGGGAGATCGACGTCTTATCCACTTTATCACATCCATTCCTCCCATCCATCCTGGGCAACTTTGAAACGGCTCAGTTAATTGGCTGGGCCGTTCCATATTGCTCAGGAGGTGATCTGAATGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTCGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCTATGGAGAATTCCACTCAATCGTCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACACCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGAACGGCCGCCGTTTATCCCGTCGAGAGATGACAGATGTTTAACGGCGGGTGAATTTGGTGGAGTGGATATAAGTGATTATTTTGAAAAGCTGAAATTGCCGTCGTCCTTGCCGTCGTCGCCGTTACGGTCACCGTCGTCTGAGTTTGAAGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MS.gene31082.t1

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNNVNTTMALKVVDKSSTHDAERRARWEIDVLSTLSHPFLPSILGNFETAQLIGWAVPYCSGGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRLWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTPLTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVERPPFIPSRDDRCLTAGEFGGVDISDYFEKLKLPSSLPSSPLRSPSSEFEDSVSFDEF