AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31548

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31548.t1 MTR_2g089620 96.899 129 4 0 10 138 44 172 4.43e-89 264
MS.gene31548.t1 MTR_2g089620 91.379 58 5 0 135 192 269 326 4.49e-18 80.5
MS.gene31548.t1 MTR_4g091490 71.318 129 33 2 10 138 45 169 4.68e-59 189
MS.gene31548.t1 MTR_2g011660 93.023 86 6 0 10 95 45 130 3.44e-55 178
MS.gene31548.t1 MTR_4g478180 70.874 103 30 0 9 111 44 146 9.65e-51 167
MS.gene31548.t1 MTR_5g029840 66.667 120 40 0 2 121 36 155 4.81e-49 162
MS.gene31548.t1 MTR_4g082290 78.652 89 19 0 10 98 44 132 5.98e-49 164
MS.gene31548.t1 MTR_4g082230 77.528 89 20 0 10 98 44 132 9.21e-48 160
MS.gene31548.t1 MTR_6g012690 73.404 94 25 0 10 103 44 137 1.80e-47 159
MS.gene31548.t1 MTR_5g007370 67.619 105 32 1 9 111 43 147 2.16e-47 157
MS.gene31548.t1 MTR_7g011170 73.626 91 24 0 10 100 44 134 5.30e-47 156
MS.gene31548.t1 MTR_3g074520 73.034 89 24 0 9 97 43 131 1.04e-46 156
MS.gene31548.t1 MTR_7g076740 75.581 86 21 0 9 94 44 129 5.00e-44 148
MS.gene31548.t1 MTR_4g073420 76.471 85 20 0 10 94 44 128 2.92e-43 146
MS.gene31548.t1 MTR_8g031360 66.667 99 32 1 9 106 45 143 1.35e-42 144
MS.gene31548.t1 MTR_1g112760 64.444 90 32 0 9 98 44 133 5.39e-42 141
MS.gene31548.t1 MTR_3g077110 64.835 91 32 0 9 99 43 133 7.41e-42 144
MS.gene31548.t1 MTR_4g102380 69.767 86 26 0 9 94 43 128 1.79e-41 141
MS.gene31548.t1 MTR_1g085640 74.118 85 22 0 10 94 44 128 2.00e-41 144
MS.gene31548.t1 MTR_4g105130 71.765 85 24 0 10 94 44 128 2.16e-41 143
MS.gene31548.t1 MTR_8g095390 71.765 85 24 0 10 94 44 128 2.53e-41 142
MS.gene31548.t1 MTR_1g085040 73.256 86 23 0 9 94 43 128 3.43e-41 142
MS.gene31548.t1 MTR_7g110830 74.118 85 22 0 10 94 44 128 3.90e-41 142
MS.gene31548.t1 MTR_5g079670 69.880 83 25 0 10 92 43 125 2.10e-40 136
MS.gene31548.t1 MTR_3g461490 67.033 91 29 1 10 100 44 133 2.60e-40 139
MS.gene31548.t1 MTR_6g009430 62.626 99 37 0 10 108 44 142 2.76e-40 139
MS.gene31548.t1 MTR_5g042030 72.619 84 23 0 12 95 41 124 3.35e-40 138
MS.gene31548.t1 MTR_5g078140 69.767 86 26 0 9 94 43 128 5.18e-40 138
MS.gene31548.t1 MTR_3g097450 72.289 83 23 0 10 92 44 126 5.82e-40 137
MS.gene31548.t1 MTR_7g115650 74.359 78 20 0 10 87 44 121 9.31e-40 134
MS.gene31548.t1 MTR_3g065440 71.429 84 24 0 9 92 43 126 2.31e-39 136
MS.gene31548.t1 MTR_4g485530 68.675 83 26 0 10 92 44 126 7.03e-39 132
MS.gene31548.t1 MTR_2g064160 66.667 84 28 0 9 92 42 125 1.01e-38 135
MS.gene31548.t1 MTR_3g083540 67.059 85 28 0 10 94 73 157 3.38e-38 133
MS.gene31548.t1 MTR_7g111290 70.930 86 25 0 9 94 1 86 4.63e-38 134
MS.gene31548.t1 MTR_1g076150 71.605 81 23 0 2 82 36 116 1.83e-37 130
MS.gene31548.t1 MTR_4g065017 63.542 96 28 1 10 98 49 144 2.44e-37 132
MS.gene31548.t1 MTR_7g111290 70.930 86 25 0 9 94 43 128 4.22e-37 132
MS.gene31548.t1 MTR_1g100653 75.000 76 19 0 10 85 44 119 5.72e-37 130
MS.gene31548.t1 MTR_1g043080 75.676 74 18 0 10 83 44 117 5.97e-37 129
MS.gene31548.t1 MTR_7g096930 75.342 73 18 0 10 82 44 116 6.51e-36 127
MS.gene31548.t1 MTR_1g043050 73.684 76 20 0 10 85 44 119 8.88e-36 125
MS.gene31548.t1 MTR_2g089450 71.429 77 22 0 9 85 43 119 2.26e-35 124
MS.gene31548.t1 MTR_8g017340 62.637 91 33 1 9 99 44 133 2.96e-35 129
MS.gene31548.t1 MTR_3g028740 75.342 73 18 0 10 82 54 126 3.37e-35 126
MS.gene31548.t1 MTR_5g010020 62.500 104 34 2 10 108 44 147 6.20e-35 125
MS.gene31548.t1 MTR_0251s0050 50.833 120 55 1 9 128 44 159 1.66e-34 123
MS.gene31548.t1 MTR_8g017350 62.921 89 32 1 9 97 44 131 1.81e-34 128
MS.gene31548.t1 MTR_8g027345 71.053 76 22 0 10 85 44 119 3.27e-34 123
MS.gene31548.t1 MTR_8g017440 53.398 103 42 1 9 105 43 145 4.83e-34 123
MS.gene31548.t1 MTR_1g100667 66.667 78 26 0 8 85 43 120 5.91e-34 121
MS.gene31548.t1 MTR_6g055910 62.791 86 31 1 8 93 15 99 6.94e-34 121
MS.gene31548.t1 MTR_8g098860 69.333 75 23 0 10 84 44 118 7.06e-34 122
MS.gene31548.t1 MTR_2g067420 77.941 68 15 0 10 77 46 113 1.05e-33 122
MS.gene31548.t1 MTR_2g099740 58.511 94 32 1 9 95 43 136 1.08e-33 124
MS.gene31548.t1 MTR_4g100720 73.611 72 19 0 10 81 45 116 1.12e-33 118
MS.gene31548.t1 MTR_7g117730 71.233 73 21 0 10 82 44 116 1.32e-33 120
MS.gene31548.t1 MTR_4g125520 72.603 73 20 0 10 82 44 116 1.57e-33 121
MS.gene31548.t1 MTR_8g017540 62.963 81 30 0 9 89 89 169 2.88e-33 122
MS.gene31548.t1 MTR_2g034790 69.863 73 22 0 10 82 44 116 7.34e-33 120
MS.gene31548.t1 MTR_7g010210 68.421 76 24 0 10 85 44 119 7.71e-33 119
MS.gene31548.t1 MTR_7g010210 68.421 76 24 0 10 85 44 119 8.29e-33 120
MS.gene31548.t1 MTR_0008s0390 68.000 75 24 0 9 83 44 118 1.27e-32 118
MS.gene31548.t1 MTR_7g087130 63.953 86 29 1 10 93 44 129 1.54e-32 119
MS.gene31548.t1 MTR_8g017390 64.000 75 27 0 9 83 44 118 1.56e-32 121
MS.gene31548.t1 MTR_3g039990 69.333 75 23 0 10 84 45 119 1.86e-32 119
MS.gene31548.t1 MTR_4g121460 68.493 73 23 0 10 82 44 116 2.04e-32 119
MS.gene31548.t1 MTR_6g055910 61.628 86 32 1 8 93 44 128 3.19e-32 117
MS.gene31548.t1 MTR_0008s0470 66.667 75 25 0 9 83 44 118 4.47e-32 117
MS.gene31548.t1 MTR_2g089420 63.636 77 28 0 9 85 42 118 5.59e-32 120
MS.gene31548.t1 MTR_1g062940 52.885 104 49 0 5 108 33 136 5.64e-32 115
MS.gene31548.t1 MTR_8g020490 67.105 76 25 0 10 85 40 115 6.44e-32 115
MS.gene31548.t1 MTR_0197s0010 65.333 75 26 0 8 82 31 105 7.79e-32 115
MS.gene31548.t1 MTR_1g017000 59.756 82 33 0 2 83 37 118 9.22e-32 115
MS.gene31548.t1 MTR_3g052430 66.667 78 25 1 10 87 73 149 9.84e-32 120
MS.gene31548.t1 MTR_8g017500 55.435 92 35 1 9 94 43 134 1.23e-31 117
MS.gene31548.t1 MTR_4g063100 60.000 80 31 1 3 81 2 81 1.87e-31 114
MS.gene31548.t1 MTR_3g052450 66.234 77 25 1 11 87 73 148 3.11e-31 119
MS.gene31548.t1 MTR_0140s0030 65.753 73 25 0 10 82 45 117 5.21e-31 115
MS.gene31548.t1 MTR_0489s0020 65.753 73 25 0 10 82 45 117 5.21e-31 115
MS.gene31548.t1 MTR_8g042410 61.628 86 32 1 2 87 61 145 5.37e-31 118
MS.gene31548.t1 MTR_3g045430 36.970 165 81 2 1 164 36 178 2.25e-30 113
MS.gene31548.t1 MTR_2g097910 44.595 148 54 3 10 152 52 176 2.26e-30 113
MS.gene31548.t1 MTR_4g063100 63.014 73 27 0 9 81 38 110 3.01e-30 111
MS.gene31548.t1 MTR_0008s0280 63.889 72 26 0 9 80 43 114 3.49e-30 110
MS.gene31548.t1 MTR_5g014990 62.195 82 31 0 2 83 37 118 5.11e-30 112
MS.gene31548.t1 MTR_1g045610 65.753 73 25 0 9 81 52 124 7.08e-30 110
MS.gene31548.t1 MTR_1g021230 66.667 72 24 0 10 81 89 160 1.03e-29 114
MS.gene31548.t1 MTR_6g012180 72.059 68 19 0 10 77 44 111 1.74e-29 111
MS.gene31548.t1 MTR_3g011610 56.977 86 36 1 2 87 61 145 1.77e-29 114
MS.gene31548.t1 MTR_0063s0090 64.789 71 25 0 9 79 43 113 2.30e-29 108
MS.gene31548.t1 MTR_4g057635 56.383 94 40 1 2 95 37 129 3.43e-29 110
MS.gene31548.t1 MTR_1g073170 63.014 73 27 0 9 81 51 123 3.83e-29 108
MS.gene31548.t1 MTR_5g079120 59.494 79 32 0 10 88 93 171 4.64e-29 109
MS.gene31548.t1 MTR_1g017140 60.976 82 32 0 2 83 37 118 5.79e-29 110
MS.gene31548.t1 MTR_2g096380 57.831 83 32 1 2 81 8 90 6.59e-29 107
MS.gene31548.t1 MTR_7g035075 61.842 76 29 0 10 85 46 121 7.24e-29 107
MS.gene31548.t1 MTR_5g079290 60.811 74 29 0 10 83 49 122 2.53e-28 107
MS.gene31548.t1 MTR_5g079220 62.162 74 28 0 10 83 53 126 4.86e-28 106
MS.gene31548.t1 MTR_5g078910 60.811 74 29 0 10 83 39 112 5.46e-28 107
MS.gene31548.t1 MTR_3g103570 63.014 73 27 0 11 83 46 118 5.53e-28 107
MS.gene31548.t1 MTR_2g096380 60.274 73 29 0 9 81 37 109 6.68e-28 105
MS.gene31548.t1 MTR_0247s0040 65.714 70 24 0 10 79 39 108 8.30e-28 103
MS.gene31548.t1 MTR_6g090405 56.098 82 36 0 2 83 37 118 9.05e-28 105
MS.gene31548.t1 MTR_7g017260 60.811 74 29 0 10 83 59 132 9.98e-28 105
MS.gene31548.t1 MTR_1g110460 58.228 79 33 0 10 88 58 136 1.56e-27 105
MS.gene31548.t1 MTR_6g006030 61.644 73 28 0 10 82 46 118 1.68e-27 103
MS.gene31548.t1 MTR_7g102110 42.105 114 55 1 10 123 45 147 2.36e-27 104
MS.gene31548.t1 MTR_8g060940 65.217 69 24 0 10 78 39 107 2.64e-27 103
MS.gene31548.t1 MTR_2g095520 68.657 67 21 0 10 76 45 111 2.82e-27 105
MS.gene31548.t1 MTR_0193s0090 60.811 74 29 0 10 83 39 112 3.11e-27 102
MS.gene31548.t1 MTR_5g078860 62.162 74 28 0 10 83 39 112 4.79e-27 104
MS.gene31548.t1 MTR_5g078800 60.811 74 29 0 10 83 39 112 6.03e-27 103
MS.gene31548.t1 MTR_1g086530 59.722 72 29 0 10 81 65 136 2.04e-26 102
MS.gene31548.t1 MTR_2g088170 64.103 78 27 1 10 87 61 137 3.62e-26 104
MS.gene31548.t1 MTR_1g086510 61.111 72 28 0 10 81 53 124 3.66e-26 101
MS.gene31548.t1 MTR_4g097570 67.164 67 22 0 9 75 45 111 3.97e-26 101
MS.gene31548.t1 MTR_0001s0360 59.722 72 29 0 12 83 41 112 4.84e-26 100
MS.gene31548.t1 MTR_4g128670 62.667 75 28 0 2 76 37 111 5.96e-26 102
MS.gene31548.t1 MTR_4g097570 62.162 74 28 0 2 75 37 110 1.57e-25 100
MS.gene31548.t1 MTR_1g083630 61.111 72 28 0 10 81 44 115 1.78e-25 102
MS.gene31548.t1 MTR_5g078930 59.722 72 29 0 10 81 41 112 2.81e-25 97.8
MS.gene31548.t1 MTR_7g109320 65.753 73 25 0 10 82 44 116 3.78e-25 100
MS.gene31548.t1 MTR_5g078950 61.429 70 27 0 10 79 39 108 4.39e-25 98.6
MS.gene31548.t1 MTR_5g062790 52.809 89 40 2 10 97 41 128 1.35e-24 97.8
MS.gene31548.t1 MTR_5g088080 47.917 96 48 2 10 104 44 138 3.69e-24 95.9
MS.gene31548.t1 MTR_5g088150 47.917 96 48 2 10 104 44 138 3.69e-24 95.9
MS.gene31548.t1 MTR_5g488210 47.917 96 48 2 10 104 44 138 3.69e-24 95.9
MS.gene31548.t1 MTR_5g488170 47.917 96 48 2 10 104 44 138 3.90e-24 95.5
MS.gene31548.t1 MTR_4g128190 47.959 98 48 2 10 106 30 125 4.18e-24 95.5
MS.gene31548.t1 MTR_5g088640 47.917 96 48 2 10 104 44 138 5.07e-24 95.9
MS.gene31548.t1 MTR_2g033170 63.380 71 26 0 10 80 56 126 3.50e-23 94.7
MS.gene31548.t1 MTR_8g006470 58.108 74 29 2 12 84 44 116 4.27e-23 93.6
MS.gene31548.t1 MTR_4g019370 55.696 79 31 1 14 92 71 145 5.49e-23 94.4
MS.gene31548.t1 MTR_3g463400 54.930 71 32 0 14 84 166 236 1.51e-22 94.0
MS.gene31548.t1 MTR_4g029540 57.333 75 30 2 12 85 44 117 4.50e-22 90.9
MS.gene31548.t1 MTR_5g088610 51.685 89 41 2 10 97 41 128 5.44e-22 91.7
MS.gene31548.t1 MTR_4g123040 62.857 70 26 0 11 80 57 126 1.70e-21 89.7
MS.gene31548.t1 MTR_4g105660 55.882 68 30 0 14 81 213 280 4.49e-21 89.7
MS.gene31548.t1 MTR_7g451170 52.941 68 32 0 14 81 224 291 5.31e-21 89.4
MS.gene31548.t1 MTR_7g061330 53.623 69 32 0 14 82 146 214 5.39e-21 90.1
MS.gene31548.t1 MTR_7g461410 53.623 69 32 0 14 82 146 214 5.39e-21 90.1
MS.gene31548.t1 MTR_5g016510 33.987 153 97 2 14 162 38 190 7.24e-21 88.2
MS.gene31548.t1 MTR_7g061330 53.623 69 32 0 14 82 110 178 7.60e-21 89.7
MS.gene31548.t1 MTR_4g094982 36.538 156 81 3 14 168 38 176 7.65e-21 87.4
MS.gene31548.t1 MTR_7g037260 34.000 150 87 4 14 161 178 317 8.88e-21 88.6
MS.gene31548.t1 MTR_5g070020 50.704 71 35 0 14 84 155 225 1.35e-20 87.8
MS.gene31548.t1 MTR_5g049190 56.716 67 29 0 14 80 52 118 2.95e-20 85.1
MS.gene31548.t1 MTR_4g088015 51.316 76 33 1 14 85 254 329 3.43e-20 87.4
MS.gene31548.t1 MTR_1g057980 56.061 66 29 0 14 79 113 178 4.03e-20 85.9
MS.gene31548.t1 MTR_3g077650 52.113 71 34 0 14 84 214 284 4.05e-20 87.4
MS.gene31548.t1 MTR_3g101290 52.941 68 32 0 14 81 70 137 5.96e-20 84.0
MS.gene31548.t1 MTR_6g015455 49.351 77 39 0 14 90 38 114 7.85e-20 87.0
MS.gene31548.t1 MTR_7g035350 56.061 66 29 0 14 79 258 323 9.50e-20 86.3
MS.gene31548.t1 MTR_6g027340 38.571 140 72 4 7 142 41 170 1.29e-19 82.8
MS.gene31548.t1 MTR_5g007300 82.222 45 8 0 10 54 96 140 1.69e-19 80.9
MS.gene31548.t1 MTR_6g027360 40.496 121 61 3 7 126 103 213 2.68e-19 84.0
MS.gene31548.t1 MTR_4g082040 54.412 68 31 0 14 81 138 205 2.94e-19 84.7
MS.gene31548.t1 MTR_3g110028 46.753 77 38 1 14 87 118 194 9.28e-19 83.6
MS.gene31548.t1 MTR_1g026870 48.052 77 37 1 14 87 118 194 9.68e-19 83.6
MS.gene31548.t1 MTR_5g041570 52.941 68 32 0 14 81 167 234 1.08e-18 83.2
MS.gene31548.t1 MTR_7g450950 51.515 66 32 0 14 79 190 255 1.11e-18 82.4
MS.gene31548.t1 MTR_6g074860 48.235 85 42 2 14 98 37 119 1.53e-18 80.5
MS.gene31548.t1 MTR_5g082910 55.556 63 28 0 14 76 52 114 1.36e-17 79.0
MS.gene31548.t1 MTR_6g027370 46.988 83 43 1 14 96 132 213 3.30e-17 78.6
MS.gene31548.t1 MTR_7g037130 45.833 72 37 1 14 85 178 247 2.82e-16 75.9
MS.gene31548.t1 MTR_7g061550 34.906 106 62 2 2 101 31 135 4.04e-16 75.5
MS.gene31548.t1 MTR_6g055910 55.172 58 25 1 36 93 2 58 5.28e-16 73.2
MS.gene31548.t1 MTR_1g085880 56.944 72 30 1 10 80 44 115 7.82e-16 72.4
MS.gene31548.t1 MTR_7g086960 52.941 68 32 0 14 81 122 189 1.42e-15 73.9
MS.gene31548.t1 MTR_5g010650 53.226 62 29 0 14 75 143 204 1.42e-15 74.3
MS.gene31548.t1 MTR_1g085770 56.944 72 30 1 10 80 44 115 1.69e-15 73.2
MS.gene31548.t1 MTR_3g089045 50.667 75 36 1 8 81 42 116 1.88e-14 70.1
MS.gene31548.t1 MTR_4g063100 62.791 43 16 0 39 81 4 46 8.51e-14 67.0
MS.gene31548.t1 MTR_2g096380 51.786 56 24 1 40 92 5 60 9.22e-13 63.9
MS.gene31548.t1 MTR_5g007310 52.632 57 24 2 61 117 3 56 1.14e-12 64.7
MS.gene31548.t1 MTR_5g038910 39.706 68 41 0 14 81 59 126 2.03e-11 62.4
MS.gene31548.t1 MTR_5g038910 39.706 68 41 0 14 81 59 126 4.01e-11 61.2
MS.gene31548.t1 MTR_1g008970 42.029 69 40 0 14 82 124 192 5.81e-11 60.1
MS.gene31548.t1 MTR_1g076150 65.714 35 12 0 48 82 30 64 6.99e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31548.t1 AT4G21440 71.642 134 29 4 10 137 44 174 1.48e-57 184
MS.gene31548.t1 AT4G05100 91.860 86 7 0 10 95 45 130 3.54e-55 177
MS.gene31548.t1 AT4G28110 90.698 86 8 0 10 95 44 129 6.81e-55 176
MS.gene31548.t1 AT5G54230 71.304 115 29 3 10 123 44 155 5.68e-51 167
MS.gene31548.t1 AT5G16770 71.569 102 29 0 10 111 44 145 2.19e-49 163
MS.gene31548.t1 AT5G16770 71.569 102 29 0 10 111 44 145 2.19e-49 163
MS.gene31548.t1 AT3G02940 78.889 90 19 0 10 99 44 133 3.01e-49 162
MS.gene31548.t1 AT5G16770 71.569 102 29 0 10 111 44 145 3.23e-49 162
MS.gene31548.t1 AT5G16770 71.569 102 29 0 10 111 44 145 3.23e-49 162
MS.gene31548.t1 AT3G02940 78.889 90 19 0 10 99 44 133 6.12e-49 162
MS.gene31548.t1 AT3G02940 78.889 90 19 0 10 99 44 133 6.12e-49 162
MS.gene31548.t1 AT5G65230 70.833 96 28 0 5 100 39 134 3.66e-48 159
MS.gene31548.t1 AT5G10280 64.545 110 39 0 5 114 39 148 2.64e-47 157
MS.gene31548.t1 AT5G15310 65.385 104 34 1 10 113 44 145 6.18e-47 154
MS.gene31548.t1 AT5G15310 65.385 104 34 1 10 113 44 145 2.80e-46 155
MS.gene31548.t1 AT5G15310 65.385 104 34 1 10 113 44 145 3.52e-46 154
MS.gene31548.t1 AT1G34670 57.692 130 53 2 9 138 43 170 1.62e-45 154
MS.gene31548.t1 AT4G17785 61.607 112 43 0 2 113 37 148 1.70e-45 153
MS.gene31548.t1 AT3G01140 75.581 86 21 0 10 95 44 129 1.71e-45 153
MS.gene31548.t1 AT4G17785 61.607 112 43 0 2 113 37 148 1.77e-45 154
MS.gene31548.t1 AT3G01140 75.581 86 21 0 10 95 87 172 4.59e-45 153
MS.gene31548.t1 AT4G34990 75.294 85 21 0 10 94 44 128 2.72e-44 148
MS.gene31548.t1 AT5G07700 74.118 85 22 0 10 94 44 128 2.31e-43 147
MS.gene31548.t1 AT5G07700 74.118 85 22 0 10 94 44 128 2.31e-43 147
MS.gene31548.t1 AT1G18570 64.486 107 32 1 10 110 45 151 3.21e-43 147
MS.gene31548.t1 AT4G22680 73.256 86 23 0 9 94 43 128 3.63e-43 145
MS.gene31548.t1 AT3G61250 73.256 86 23 0 9 94 43 128 3.64e-43 146
MS.gene31548.t1 AT1G57560 57.377 122 46 3 9 130 43 158 1.10e-42 144
MS.gene31548.t1 AT1G57560 70.930 86 25 0 9 94 43 128 1.44e-42 145
MS.gene31548.t1 AT5G26660 62.745 102 36 1 11 112 14 113 1.68e-42 145
MS.gene31548.t1 AT2G16720 75.904 83 20 0 10 92 44 126 2.45e-42 143
MS.gene31548.t1 AT5G61420 74.118 85 22 0 10 94 44 128 2.53e-42 145
MS.gene31548.t1 AT1G22640 59.649 114 44 1 10 121 44 157 2.89e-42 142
MS.gene31548.t1 AT4G38620 74.118 85 22 0 10 94 44 128 2.92e-42 143
MS.gene31548.t1 AT5G26660 61.538 104 38 1 9 112 43 144 4.86e-42 144
MS.gene31548.t1 AT1G74080 56.000 125 53 1 10 132 44 168 5.89e-42 144
MS.gene31548.t1 AT5G07690 72.941 85 23 0 10 94 44 128 6.30e-42 144
MS.gene31548.t1 AT4G12350 72.093 86 24 0 9 94 43 128 1.22e-41 142
MS.gene31548.t1 AT5G60890 70.588 85 25 0 10 94 44 128 3.87e-41 140
MS.gene31548.t1 AT4G09460 73.494 83 22 0 10 92 44 126 6.08e-41 139
MS.gene31548.t1 AT5G62320 56.140 114 45 1 9 122 51 159 7.00e-41 139
MS.gene31548.t1 AT3G13540 58.407 113 41 2 10 121 55 162 7.69e-41 139
MS.gene31548.t1 AT1G09540 72.093 86 24 0 9 94 43 128 1.21e-40 141
MS.gene31548.t1 AT1G18710 64.444 90 32 0 10 99 44 133 3.18e-40 137
MS.gene31548.t1 AT5G56110 70.588 85 25 0 10 94 44 128 5.20e-40 138
MS.gene31548.t1 AT1G66230 69.767 86 26 0 9 94 43 128 6.69e-40 137
MS.gene31548.t1 AT1G35515 71.084 83 24 0 10 92 44 126 1.12e-39 134
MS.gene31548.t1 AT5G16600 68.605 86 27 0 9 94 43 128 2.09e-39 137
MS.gene31548.t1 AT4G01680 73.494 83 22 0 10 92 44 126 2.23e-39 135
MS.gene31548.t1 AT4G01680 70.115 87 26 0 6 92 52 138 4.29e-39 137
MS.gene31548.t1 AT1G74430 65.882 85 29 0 10 94 44 128 5.14e-39 134
MS.gene31548.t1 AT4G01680 73.494 83 22 0 10 92 44 126 1.13e-38 135
MS.gene31548.t1 AT3G12720 66.667 84 28 0 9 92 53 136 1.85e-38 134
MS.gene31548.t1 AT3G28470 48.936 141 71 1 10 150 44 183 7.15e-38 133
MS.gene31548.t1 AT3G23250 75.342 73 18 0 10 82 44 116 1.89e-36 128
MS.gene31548.t1 AT1G06180 69.048 84 26 0 2 85 36 119 5.85e-36 126
MS.gene31548.t1 AT5G14340 61.798 89 34 0 9 97 55 143 7.97e-36 126
MS.gene31548.t1 AT1G63910 65.517 87 30 0 10 96 44 130 8.26e-36 129
MS.gene31548.t1 AT5G12870 73.333 75 20 0 10 84 50 124 1.17e-35 126
MS.gene31548.t1 AT1G16490 73.973 73 19 0 10 82 46 118 1.49e-35 125
MS.gene31548.t1 AT2G31180 52.632 114 43 1 10 112 44 157 1.52e-35 125
MS.gene31548.t1 AT5G35550 70.000 80 24 0 3 82 42 121 4.20e-35 124
MS.gene31548.t1 AT1G79180 72.368 76 21 0 10 85 46 121 4.89e-35 125
MS.gene31548.t1 AT1G79180 73.333 75 20 0 11 85 80 154 1.30e-34 124
MS.gene31548.t1 AT1G56160 68.293 82 26 0 1 82 37 118 2.01e-34 123
MS.gene31548.t1 AT5G14750 68.493 73 23 0 10 82 48 120 3.99e-34 120
MS.gene31548.t1 AT3G12820 64.286 84 30 0 1 84 37 120 8.66e-34 120
MS.gene31548.t1 AT5G35550 73.973 73 19 0 10 82 46 118 9.68e-34 120
MS.gene31548.t1 AT5G40330 67.123 73 24 0 10 82 44 116 2.78e-33 118
MS.gene31548.t1 AT5G55020 70.513 78 22 1 10 87 58 134 3.45e-33 124
MS.gene31548.t1 AT3G13890 67.568 74 24 0 10 83 44 117 3.73e-33 121
MS.gene31548.t1 AT3G27920 64.865 74 26 0 10 83 46 119 5.52e-33 118
MS.gene31548.t1 AT3G12820 70.423 71 21 0 14 84 2 72 9.01e-33 116
MS.gene31548.t1 AT3G08500 71.233 73 21 0 10 82 62 134 1.27e-32 120
MS.gene31548.t1 AT5G14750 68.116 69 22 0 14 82 18 86 1.97e-32 115
MS.gene31548.t1 AT5G62470 66.667 75 25 0 10 84 44 118 2.63e-32 119
MS.gene31548.t1 AT3G13890 68.056 72 23 0 12 83 55 126 4.15e-32 119
MS.gene31548.t1 AT3G53200 68.831 77 24 0 5 81 36 112 5.51e-32 115
MS.gene31548.t1 AT1G08810 67.089 79 26 0 10 88 44 122 5.99e-32 116
MS.gene31548.t1 AT3G47600 66.667 75 25 0 10 84 44 118 7.93e-32 117
MS.gene31548.t1 AT1G74650 68.919 74 23 0 10 83 44 117 8.70e-32 117
MS.gene31548.t1 AT3G53200 67.089 79 26 0 3 81 1 79 9.31e-32 114
MS.gene31548.t1 AT4G25560 66.667 78 26 0 8 85 40 117 1.13e-31 116
MS.gene31548.t1 AT1G22640 55.556 99 42 1 25 121 2 100 1.24e-31 114
MS.gene31548.t1 AT5G52600 68.056 72 23 0 10 81 44 115 1.44e-31 113
MS.gene31548.t1 AT3G47600 66.216 74 25 0 11 84 39 112 1.62e-31 116
MS.gene31548.t1 AT3G28910 64.557 79 28 0 10 88 44 122 3.07e-31 115
MS.gene31548.t1 AT2G26960 52.830 106 48 2 10 115 52 155 3.34e-31 117
MS.gene31548.t1 AT5G52260 70.513 78 23 0 8 85 42 119 3.68e-31 114
MS.gene31548.t1 AT2G47460 67.123 73 24 0 10 82 44 116 4.87e-31 116
MS.gene31548.t1 AT4G26930 66.667 78 25 1 10 87 51 127 6.27e-31 116
MS.gene31548.t1 AT3G62610 67.123 73 24 0 10 82 44 116 6.44e-31 115
MS.gene31548.t1 AT5G40350 61.842 76 29 0 11 86 5 80 6.87e-31 110
MS.gene31548.t1 AT3G11440 62.821 78 28 1 10 87 73 149 9.29e-31 117
MS.gene31548.t1 AT5G06100 64.103 78 27 1 10 87 64 140 1.14e-30 116
MS.gene31548.t1 AT5G62470 66.667 75 24 1 10 84 44 117 1.48e-30 114
MS.gene31548.t1 AT5G40350 61.039 77 30 0 10 86 49 125 2.03e-30 111
MS.gene31548.t1 AT3G11440 58.140 86 35 1 2 87 65 149 2.13e-30 116
MS.gene31548.t1 AT3G11440 58.140 86 35 1 2 87 65 149 2.13e-30 116
MS.gene31548.t1 AT3G11440 58.140 86 35 1 2 87 65 149 2.13e-30 116
MS.gene31548.t1 AT5G06100 64.103 78 27 1 10 87 64 140 2.49e-30 116
MS.gene31548.t1 AT5G06100 64.103 78 27 1 10 87 64 140 2.49e-30 116
MS.gene31548.t1 AT5G06100 64.103 78 27 1 10 87 64 140 2.49e-30 116
MS.gene31548.t1 AT5G06100 64.103 78 27 1 10 87 64 140 2.49e-30 116
MS.gene31548.t1 AT5G23000 62.195 82 31 0 2 83 37 118 3.27e-30 113
MS.gene31548.t1 AT5G49330 65.753 73 25 0 10 82 44 116 3.31e-30 113
MS.gene31548.t1 AT3G01530 59.036 83 34 0 10 92 57 139 3.37e-30 110
MS.gene31548.t1 AT2G32460 62.821 78 28 1 10 87 50 126 6.01e-30 115
MS.gene31548.t1 AT2G32460 62.821 78 28 1 10 87 38 114 6.22e-30 114
MS.gene31548.t1 AT5G57620 62.195 82 31 0 2 83 37 118 6.44e-30 112
MS.gene31548.t1 AT3G49690 62.195 82 31 0 2 83 37 118 6.87e-30 112
MS.gene31548.t1 AT5G65790 62.195 82 31 0 2 83 37 118 1.25e-29 112
MS.gene31548.t1 AT5G59780 62.667 75 28 0 7 81 16 90 1.47e-29 108
MS.gene31548.t1 AT5G59780 61.644 73 28 0 9 81 39 111 3.12e-29 108
MS.gene31548.t1 AT3G27810 59.740 77 31 0 11 87 4 80 3.97e-29 106
MS.gene31548.t1 AT3G46130 61.644 73 28 0 9 81 40 112 5.95e-29 108
MS.gene31548.t1 AT3G46130 62.500 72 27 0 10 81 9 80 9.30e-29 107
MS.gene31548.t1 AT4G13480 64.384 73 26 0 9 81 37 109 1.07e-28 107
MS.gene31548.t1 AT1G48000 53.763 93 41 1 10 100 64 156 1.07e-28 107
MS.gene31548.t1 AT3G24310 64.384 73 26 0 9 81 49 121 1.22e-28 107
MS.gene31548.t1 AT1G66370 62.500 72 27 0 10 81 40 111 1.54e-28 107
MS.gene31548.t1 AT3G46130 62.162 74 28 0 8 81 17 90 1.63e-28 106
MS.gene31548.t1 AT3G27810 59.740 77 31 0 11 87 53 129 1.78e-28 106
MS.gene31548.t1 AT2G36890 53.846 91 42 0 2 92 37 127 2.90e-28 107
MS.gene31548.t1 AT2G47190 62.500 72 27 0 10 81 52 123 4.23e-28 106
MS.gene31548.t1 AT2G36890 53.846 91 42 0 2 92 78 168 4.48e-28 107
MS.gene31548.t1 AT3G30210 66.197 71 24 0 10 80 59 129 5.31e-28 106
MS.gene31548.t1 AT1G25340 55.422 83 37 0 10 92 50 132 5.54e-28 106
MS.gene31548.t1 AT4G37780 61.644 73 28 0 11 83 46 118 6.73e-28 106
MS.gene31548.t1 AT3G23250 74.138 58 15 0 25 82 2 59 5.12e-27 102
MS.gene31548.t1 AT1G71030 45.872 109 56 2 3 111 6 111 5.15e-27 101
MS.gene31548.t1 AT3G48920 60.274 73 29 0 8 80 48 120 6.83e-27 103
MS.gene31548.t1 AT1G71030 48.421 95 47 1 17 111 5 97 7.54e-27 100
MS.gene31548.t1 AT1G68320 52.174 92 39 1 10 101 51 137 1.54e-26 102
MS.gene31548.t1 AT1G66380 63.889 72 26 0 10 81 7 78 1.94e-26 97.8
MS.gene31548.t1 AT1G66380 63.889 72 26 0 10 81 40 111 1.32e-25 96.7
MS.gene31548.t1 AT1G56650 51.546 97 39 1 8 96 38 134 2.26e-25 99.0
MS.gene31548.t1 AT1G25340 55.844 77 34 0 16 92 51 127 2.74e-25 99.4
MS.gene31548.t1 AT1G25340 55.844 77 34 0 16 92 51 127 4.37e-25 99.4
MS.gene31548.t1 AT1G66390 63.889 72 26 0 10 81 40 111 8.80e-25 97.4
MS.gene31548.t1 AT2G26950 56.410 78 33 1 10 87 48 124 1.97e-24 98.6
MS.gene31548.t1 AT3G06490 50.515 97 46 1 6 100 47 143 5.93e-24 96.7
MS.gene31548.t1 AT5G14750 63.793 58 21 0 25 82 2 59 2.76e-23 90.5
MS.gene31548.t1 AT5G14750 63.793 58 21 0 25 82 2 59 2.76e-23 90.5
MS.gene31548.t1 AT3G60460 58.108 74 29 2 12 84 45 117 4.68e-23 94.0
MS.gene31548.t1 AT1G18960 47.619 84 42 1 11 94 40 121 5.52e-23 93.6
MS.gene31548.t1 AT4G28110 90.476 42 4 0 54 95 4 45 1.25e-22 90.5
MS.gene31548.t1 AT5G49620 45.714 105 55 1 12 114 60 164 1.44e-22 92.8
MS.gene31548.t1 AT2G39880 61.765 68 26 0 14 81 83 150 5.19e-22 92.0
MS.gene31548.t1 AT3G09230 54.286 70 32 0 14 83 88 157 2.46e-21 90.5
MS.gene31548.t1 AT4G18770 55.072 69 31 0 14 82 250 318 3.21e-21 90.1
MS.gene31548.t1 AT2G25230 50.633 79 37 1 14 90 59 137 3.44e-21 87.4
MS.gene31548.t1 AT5G40360 43.396 106 51 3 14 114 191 292 9.67e-21 88.6
MS.gene31548.t1 AT3G55730 58.824 68 28 0 14 81 89 156 3.07e-20 87.4
MS.gene31548.t1 AT5G61420 72.917 48 13 0 47 94 2 49 8.31e-20 84.7
MS.gene31548.t1 AT5G58850 52.941 68 32 0 14 81 138 205 1.20e-19 85.9
MS.gene31548.t1 AT4G37260 52.941 68 32 0 14 81 46 113 2.01e-19 84.3
MS.gene31548.t1 AT5G02320 50.725 69 34 0 14 82 160 228 2.54e-19 85.1
MS.gene31548.t1 AT5G02320 50.725 69 34 0 14 82 160 228 2.54e-19 85.1
MS.gene31548.t1 AT5G02320 50.725 69 34 0 14 82 100 168 3.11e-19 85.1
MS.gene31548.t1 AT3G27785 47.500 80 40 1 14 91 222 301 3.32e-19 84.7
MS.gene31548.t1 AT1G69560 51.316 76 36 1 8 82 133 208 3.66e-19 83.6
MS.gene31548.t1 AT5G67300 51.471 68 33 0 14 81 39 106 3.95e-19 83.2
MS.gene31548.t1 AT1G69560 51.316 76 36 1 8 82 149 224 4.03e-19 84.0
MS.gene31548.t1 AT5G11050 33.333 153 84 2 14 154 138 284 5.19e-19 84.0
MS.gene31548.t1 AT5G49620 40.336 119 55 2 12 114 60 178 5.83e-19 83.2
MS.gene31548.t1 AT1G26780 55.714 70 30 1 8 76 124 193 6.81e-19 82.4
MS.gene31548.t1 AT3G09370 51.471 68 33 0 14 81 163 230 8.16e-19 84.0
MS.gene31548.t1 AT3G09370 51.471 68 33 0 14 81 168 235 8.29e-19 83.6
MS.gene31548.t1 AT2G23290 51.471 68 33 0 14 81 46 113 9.71e-19 82.4
MS.gene31548.t1 AT3G09370 47.619 84 40 1 14 93 176 259 9.77e-19 83.6
MS.gene31548.t1 AT1G26780 55.714 70 30 1 8 76 124 193 1.17e-18 82.8
MS.gene31548.t1 AT3G50060 50.000 68 34 0 14 81 39 106 2.00e-18 81.3
MS.gene31548.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.60e-18 82.4
MS.gene31548.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.60e-18 82.4
MS.gene31548.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.60e-18 82.4
MS.gene31548.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.60e-18 82.4
MS.gene31548.t1 AT4G32730 47.826 69 36 0 14 82 120 188 3.23e-18 82.0
MS.gene31548.t1 AT1G17950 52.941 68 32 0 14 81 38 105 5.00e-18 79.3
MS.gene31548.t1 AT3G29020 39.450 109 58 3 7 107 92 200 6.39e-18 80.1
MS.gene31548.t1 AT3G29020 41.237 97 50 2 14 103 98 194 1.34e-17 78.2
MS.gene31548.t1 AT5G40430 45.205 73 40 0 14 86 86 158 1.56e-17 78.2
MS.gene31548.t1 AT5G15310 73.810 42 11 0 54 95 9 50 2.86e-17 77.4
MS.gene31548.t1 AT4G33450 48.529 68 35 0 14 81 52 119 5.37e-17 76.6
MS.gene31548.t1 AT4G25560 65.306 49 17 0 37 85 3 51 9.36e-17 75.5
MS.gene31548.t1 AT5G11510 44.928 69 38 0 14 82 114 182 1.84e-16 77.0
MS.gene31548.t1 AT5G11510 44.928 69 38 0 14 82 114 182 1.84e-16 77.0
MS.gene31548.t1 AT5G11510 44.928 69 38 0 14 82 114 182 1.84e-16 77.0
MS.gene31548.t1 AT5G11510 44.928 69 38 0 14 82 114 182 2.05e-16 77.0
MS.gene31548.t1 AT5G11510 44.928 69 38 0 14 82 114 182 2.23e-16 77.0
MS.gene31548.t1 AT4G00540 50.725 69 34 0 14 82 139 207 3.99e-16 75.9
MS.gene31548.t1 AT5G17800 47.297 74 39 0 12 85 124 197 5.13e-16 75.1
MS.gene31548.t1 AT4G00540 50.725 69 34 0 14 82 137 205 5.78e-16 75.5
MS.gene31548.t1 AT1G22640 48.571 70 34 1 54 121 16 85 1.75e-15 71.2
MS.gene31548.t1 AT1G73410 52.941 68 32 0 14 81 39 106 2.18e-15 72.4
MS.gene31548.t1 AT1G73410 52.941 68 32 0 14 81 39 106 2.21e-15 71.6
MS.gene31548.t1 AT5G59780 62.791 43 16 0 39 81 4 46 3.34e-14 67.8
MS.gene31548.t1 AT3G46130 62.791 43 16 0 39 81 4 46 4.28e-14 67.8
MS.gene31548.t1 AT1G74650 65.000 40 14 0 44 83 2 41 2.44e-13 66.6
MS.gene31548.t1 AT1G74430 50.980 51 25 0 44 94 9 59 2.52e-13 65.9
MS.gene31548.t1 AT2G37630 44.286 70 39 0 12 81 38 107 2.99e-13 67.4
MS.gene31548.t1 AT5G39700 43.056 72 40 1 14 85 89 159 4.62e-13 65.1
MS.gene31548.t1 AT3G28910 57.778 45 19 0 44 88 2 46 7.80e-13 65.5
MS.gene31548.t1 AT5G14340 51.923 52 24 1 47 97 2 53 1.21e-12 63.9
MS.gene31548.t1 AT1G14350 37.647 85 51 1 14 96 58 142 4.31e-12 64.3
MS.gene31548.t1 AT1G14350 37.647 85 51 1 14 96 58 142 4.31e-12 64.3
MS.gene31548.t1 AT2G02820 41.176 68 40 0 14 81 63 130 1.70e-11 62.4
MS.gene31548.t1 AT2G02820 41.176 68 40 0 14 81 63 130 1.83e-11 62.4
MS.gene31548.t1 AT2G02820 41.176 68 40 0 14 81 63 130 3.58e-11 61.2

Find 41 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCATTTCTGAACTTATT+AGG 0.176951 2.4:+11368814 MS.gene31548:CDS
ATTCTCAGATCAGCTTTATT+AGG 0.234361 2.4:+11368772 MS.gene31548:CDS
TATTTCATTGTCTGTTCTTC+CGG 0.234826 2.4:-11368641 None:intergenic
GCGGCTAGCTTTAACAATTC+AGG 0.240123 2.4:-11368859 None:intergenic
AGCTGATCTGAGAATATTAA+TGG 0.303694 2.4:-11368764 None:intergenic
ATTTCATTGTCTGTTCTTCC+GGG 0.338932 2.4:-11368640 None:intergenic
AACCTTCCTCTCTTGATATC+AGG 0.347637 2.4:-11368151 None:intergenic
TTCAGAAATGATGGGTTCAT+TGG 0.357638 2.4:-11368805 None:intergenic
CCTAATAAGTTCAGAAATGA+TGG 0.368616 2.4:-11368814 None:intergenic
ACTACTGGAACACGCACATT+AGG 0.393806 2.4:+11368668 MS.gene31548:CDS
AGACGTGGAGTATGAGTAAC+AGG 0.402224 2.4:-11368718 None:intergenic
CGGCTAGCTTTAACAATTCA+GGG 0.404962 2.4:-11368858 None:intergenic
ATTCAGCTCCACGGTGTCTT+GGG 0.417820 2.4:+11368199 MS.gene31548:CDS
TATTCAGCTCCACGGTGTCT+TGG 0.437369 2.4:+11368198 MS.gene31548:CDS
TCAGAAATGATGGGTTCATT+GGG 0.441253 2.4:-11368804 None:intergenic
CGAAATTCCAGAGAGTACTT+TGG 0.459725 2.4:+11369290 MS.gene31548:CDS
ACAATGAAATAAAGAACTAC+TGG 0.460692 2.4:+11368653 MS.gene31548:CDS
AATACTCTCTTCTTCTTCAA+AGG 0.469466 2.4:-11368176 None:intergenic
CTCAGATCAGCTTTATTAGG+AGG 0.473968 2.4:+11368775 MS.gene31548:CDS
GGTGTTGGTGTCGTCGATAA+AGG 0.492897 2.4:-11369198 None:intergenic
GCAAGAGTTGTCGCCTTCGA+TGG 0.493189 2.4:+11368113 MS.gene31548:CDS
TTAATGTCCAAAGTACTCTC+TGG 0.494232 2.4:-11369297 None:intergenic
AAATGATGGGTTCATTGGGT+TGG 0.498615 2.4:-11368800 None:intergenic
AAACAGTACGGGATATGAAT+CGG 0.507142 2.4:+11369161 MS.gene31548:intron
ACATATGTTGGTGATGGTGT+TGG 0.520525 2.4:-11369213 None:intergenic
ATATTATTACAGGTCTTCAA+AGG 0.587096 2.4:+11368086 MS.gene31548:CDS
TCATTTCTGAACTTATTAGG+TGG 0.587317 2.4:+11368817 MS.gene31548:CDS
ATTACAGGTCTTCAAAGGTG+TGG 0.593786 2.4:+11368091 MS.gene31548:CDS
GCTATAGCTGCTAGATTACC+CGG 0.599027 2.4:+11368622 MS.gene31548:CDS
TCAAATAGTTTGTCCATCGA+AGG 0.602928 2.4:-11368126 None:intergenic
CTATTCACATATGTTGGTGA+TGG 0.609261 2.4:-11369219 None:intergenic
CTAATAAGTTCAGAAATGAT+GGG 0.614515 2.4:-11368813 None:intergenic
GTGCAGCTATTCACATATGT+TGG 0.620924 2.4:-11369225 None:intergenic
GACCTGATATCAAGAGAGGA+AGG 0.621894 2.4:+11368149 MS.gene31548:CDS
TTGAGACCTGATATCAAGAG+AGG 0.625731 2.4:+11368145 MS.gene31548:CDS
GAGAGTATTATTCAGCTCCA+CGG 0.628657 2.4:+11368190 MS.gene31548:CDS
AGGAAAAGACTACTTCGAAG+TGG 0.647134 2.4:+11368688 MS.gene31548:CDS
TGATCTGAGAATATTAATGG+AGG 0.677931 2.4:-11368761 None:intergenic
TCAAATAGATGATCGAGACG+TGG 0.708158 2.4:-11368733 None:intergenic
ACTTGTTTCCCAAGACACCG+TGG 0.731242 2.4:-11368207 None:intergenic
ATATGTGAATAGCTGCACAG+AGG 0.785270 2.4:+11369230 MS.gene31548:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTACATAAAGAAATTT+AGG - chr2.4:11368464-11368483 None:intergenic 10.0%
!! ATTAAATAGCAACATAAATT+TGG + chr2.4:11368894-11368913 MS.gene31548:intron 15.0%
!! TAGAAAATTGGTTAAATATA+TGG - chr2.4:11368512-11368531 None:intergenic 15.0%
!! TTAAATAGCAACATAAATTT+GGG + chr2.4:11368895-11368914 MS.gene31548:intron 15.0%
!! TTCTACTATTAGAAAAATTT+AGG - chr2.4:11368270-11368289 None:intergenic 15.0%
!! TCATTCCAATTAAAATTTGA+TGG - chr2.4:11368241-11368260 None:intergenic 20.0%
!! TTTCATTGCTTAAATAATGA+TGG + chr2.4:11369132-11369151 MS.gene31548:intron 20.0%
!!! AATACAAATCCTTGTTATTT+TGG + chr2.4:11369075-11369094 MS.gene31548:intron 20.0%
!!! AGTAGAAAAATATATCGATT+TGG + chr2.4:11368283-11368302 MS.gene31548:intron 20.0%
!!! TATGTTGCTATTTAATAATG+TGG - chr2.4:11368890-11368909 None:intergenic 20.0%
!!! TTTTGCTTGAATATTATTAC+AGG + chr2.4:11368076-11368095 MS.gene31548:CDS 20.0%
! ACAATGAAATAAAGAACTAC+TGG + chr2.4:11368653-11368672 MS.gene31548:CDS 25.0%
! ATATTATTACAGGTCTTCAA+AGG + chr2.4:11368086-11368105 MS.gene31548:CDS 25.0%
! ATCAGTACAAATGGATATAT+TGG - chr2.4:11368339-11368358 None:intergenic 25.0%
! CTAATAAGTTCAGAAATGAT+GGG - chr2.4:11368816-11368835 None:intergenic 25.0%
! GAAAATTATTAACCTCTACA+AGG - chr2.4:11368408-11368427 None:intergenic 25.0%
! TTGTTTACCATGAACATTAT+AGG + chr2.4:11368593-11368612 MS.gene31548:intron 25.0%
!! TTTTATCATTAACCTTGTAG+AGG + chr2.4:11368393-11368412 MS.gene31548:intron 25.0%
!!! ACTTTTTCACACTAGAAAAT+TGG - chr2.4:11368524-11368543 None:intergenic 25.0%
!!! TGTGTCCATCAAATTTTAAT+TGG + chr2.4:11368233-11368252 MS.gene31548:intron 25.0%
AAATCCTCTCCAAAATAACA+AGG - chr2.4:11369087-11369106 None:intergenic 30.0%
AATACTCTCTTCTTCTTCAA+AGG - chr2.4:11368179-11368198 None:intergenic 30.0%
AATGCGAATAATGGCTTATT+AGG + chr2.4:11369024-11369043 MS.gene31548:intron 30.0%
ACATTCTACACAATAGACTA+AGG - chr2.4:11368430-11368449 None:intergenic 30.0%
AGCTGATCTGAGAATATTAA+TGG - chr2.4:11368767-11368786 None:intergenic 30.0%
CAGATAAATAATGCTGCTAA+TGG + chr2.4:11368934-11368953 MS.gene31548:intron 30.0%
CCATCATTTCTGAACTTATT+AGG + chr2.4:11368814-11368833 MS.gene31548:CDS 30.0%
CCTAATAAGTTCAGAAATGA+TGG - chr2.4:11368817-11368836 None:intergenic 30.0%
TATTTCATTGTCTGTTCTTC+CGG - chr2.4:11368644-11368663 None:intergenic 30.0%
TCATTTCTGAACTTATTAGG+TGG + chr2.4:11368817-11368836 MS.gene31548:CDS 30.0%
TGATCTGAGAATATTAATGG+AGG - chr2.4:11368764-11368783 None:intergenic 30.0%
TGATGGAAACAAAAACAGTA+CGG + chr2.4:11369149-11369168 MS.gene31548:intron 30.0%
TTTACCATGAACATTATAGG+TGG + chr2.4:11368596-11368615 MS.gene31548:intron 30.0%
!! ATTCTCAGATCAGCTTTATT+AGG + chr2.4:11368772-11368791 MS.gene31548:CDS 30.0%
!!! AAATCCTTGTTATTTTGGAG+AGG + chr2.4:11369080-11369099 MS.gene31548:intron 30.0%
AAACAGTACGGGATATGAAT+CGG + chr2.4:11369161-11369180 MS.gene31548:intron 35.0%
ATAAGCCATTATTCGCATTG+TGG - chr2.4:11369023-11369042 None:intergenic 35.0%
ATTTAATAATGTGGCCGTTG+CGG - chr2.4:11368881-11368900 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+GGG - chr2.4:11368643-11368662 None:intergenic 35.0%
GATGGAAACAAAAACAGTAC+GGG + chr2.4:11369150-11369169 MS.gene31548:intron 35.0%
TAAGCCATTATTCGCATTGT+GGG - chr2.4:11369022-11369041 None:intergenic 35.0%
! CTATTCACATATGTTGGTGA+TGG - chr2.4:11369222-11369241 None:intergenic 35.0%
! TCAAATAGTTTGTCCATCGA+AGG - chr2.4:11368129-11368148 None:intergenic 35.0%
! TTAATGTCCAAAGTACTCTC+TGG - chr2.4:11369300-11369319 None:intergenic 35.0%
!! TCAGAAATGATGGGTTCATT+GGG - chr2.4:11368807-11368826 None:intergenic 35.0%
!! TTCAGAAATGATGGGTTCAT+TGG - chr2.4:11368808-11368827 None:intergenic 35.0%
AACCTTCCTCTCTTGATATC+AGG - chr2.4:11368154-11368173 None:intergenic 40.0%
AGGAAAAGACTACTTCGAAG+TGG + chr2.4:11368688-11368707 MS.gene31548:CDS 40.0%
ATATGTGAATAGCTGCACAG+AGG + chr2.4:11369230-11369249 MS.gene31548:CDS 40.0%
ATTACAGGTCTTCAAAGGTG+TGG + chr2.4:11368091-11368110 MS.gene31548:CDS 40.0%
ATTGTTAAAGCTAGCCGCAA+CGG + chr2.4:11368864-11368883 MS.gene31548:intron 40.0%
CAAACCCACAATGCGAATAA+TGG + chr2.4:11369015-11369034 MS.gene31548:intron 40.0%
CAGACCACCTATAATGTTCA+TGG - chr2.4:11368603-11368622 None:intergenic 40.0%
GTGCAGCTATTCACATATGT+TGG - chr2.4:11369228-11369247 None:intergenic 40.0%
TCAAATAGATGATCGAGACG+TGG - chr2.4:11368736-11368755 None:intergenic 40.0%
TTGAGACCTGATATCAAGAG+AGG + chr2.4:11368145-11368164 MS.gene31548:CDS 40.0%
! ATCGTACTGATCACCTATAG+CGG - chr2.4:11368371-11368390 None:intergenic 40.0%
!! AAATGATGGGTTCATTGGGT+TGG - chr2.4:11368803-11368822 None:intergenic 40.0%
!! ACATATGTTGGTGATGGTGT+TGG - chr2.4:11369216-11369235 None:intergenic 40.0%
!! CGAAATTCCAGAGAGTACTT+TGG + chr2.4:11369290-11369309 MS.gene31548:CDS 40.0%
!! CGGCTAGCTTTAACAATTCA+GGG - chr2.4:11368861-11368880 None:intergenic 40.0%
!! CTCAGATCAGCTTTATTAGG+AGG + chr2.4:11368775-11368794 MS.gene31548:CDS 40.0%
!! GAGAGTATTATTCAGCTCCA+CGG + chr2.4:11368190-11368209 MS.gene31548:CDS 40.0%
!! TCGATTTGGATTCTCTTCAG+CGG + chr2.4:11368297-11368316 MS.gene31548:intron 40.0%
ACTACTGGAACACGCACATT+AGG + chr2.4:11368668-11368687 MS.gene31548:CDS 45.0%
AGACGTGGAGTATGAGTAAC+AGG - chr2.4:11368721-11368740 None:intergenic 45.0%
GACCTGATATCAAGAGAGGA+AGG + chr2.4:11368149-11368168 MS.gene31548:CDS 45.0%
GCTATAGCTGCTAGATTACC+CGG + chr2.4:11368622-11368641 MS.gene31548:CDS 45.0%
TTCGCATTGTGGGTTTGAGT+TGG - chr2.4:11369012-11369031 None:intergenic 45.0%
! CCATTTGTACTGATCACCTG+CGG + chr2.4:11368345-11368364 MS.gene31548:intron 45.0%
!! GCGGCTAGCTTTAACAATTC+AGG - chr2.4:11368862-11368881 None:intergenic 45.0%
ACTTGTTTCCCAAGACACCG+TGG - chr2.4:11368210-11368229 None:intergenic 50.0%
ATTCAGCTCCACGGTGTCTT+GGG + chr2.4:11368199-11368218 MS.gene31548:CDS 50.0%
CCGCAGGTGATCAGTACAAA+TGG - chr2.4:11368348-11368367 None:intergenic 50.0%
TATTCAGCTCCACGGTGTCT+TGG + chr2.4:11368198-11368217 MS.gene31548:CDS 50.0%
!! GGTGTTGGTGTCGTCGATAA+AGG - chr2.4:11369201-11369220 None:intergenic 50.0%
CTTCAGCGGCTGCATGATGT+TGG + chr2.4:11368311-11368330 MS.gene31548:intron 55.0%
GCAAGAGTTGTCGCCTTCGA+TGG + chr2.4:11368113-11368132 MS.gene31548:CDS 55.0%
TGATCACCTATAGCGGCCGC+AGG - chr2.4:11368364-11368383 None:intergenic 60.0%
TGATCACCTGCGGCCGCTAT+AGG + chr2.4:11368355-11368374 MS.gene31548:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 11368067 11369332 11368067 ID=MS.gene31548
chr2.4 mRNA 11368067 11369332 11368067 ID=MS.gene31548.t1;Parent=MS.gene31548
chr2.4 exon 11368067 11368227 11368067 ID=MS.gene31548.t1.exon1;Parent=MS.gene31548.t1
chr2.4 CDS 11368067 11368227 11368067 ID=cds.MS.gene31548.t1;Parent=MS.gene31548.t1
chr2.4 exon 11368615 11368866 11368615 ID=MS.gene31548.t1.exon2;Parent=MS.gene31548.t1
chr2.4 CDS 11368615 11368866 11368615 ID=cds.MS.gene31548.t1;Parent=MS.gene31548.t1
chr2.4 exon 11369167 11369332 11369167 ID=MS.gene31548.t1.exon3;Parent=MS.gene31548.t1
chr2.4 CDS 11369167 11369332 11369167 ID=cds.MS.gene31548.t1;Parent=MS.gene31548.t1
Gene Sequence

>MS.gene31548

ATGAACTTGTTTTGCTTGAATATTATTACAGGTCTTCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGACAAACTATTTGAGACCTGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGAGTATTATTCAGCTCCACGGTGTCTTGGGAAACAAGTACGTGTGTCCATCAAATTTTAATTGGAATGAAAGCGTCCTAAATTTTTCTAATAGTAGAAAAATATATCGATTTGGATTCTCTTCAGCGGCTGCATGATGTTGGTACCAATATATCCATTTGTACTGATCACCTGCGGCCGCTATAGGTGATCAGTACGATAATTTTATCATTAACCTTGTAGAGGTTAATAATTTTCCTTAGTCTATTGTGTAGAATGTGTCTCACTTGTCCTAAATTTCTTTATGTAAAATAAAAATACATGATTAACTTCTTATATCCATATATTTAACCAATTTTCTAGTGTGAAAAAGTTTTAACTTGTTGTTTTTGTTGTTTAAAGACTTTATGCTAAGTGTTTTTATTGTTTACCATGAACATTATAGGTGGTCTGCTATAGCTGCTAGATTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATCGATCCTGTTACTCATACTCCACGTCTCGATCATCTATTTGACATGTCCTCCATTAATATTCTCAGATCAGCTTTATTAGGAGGAACCAACCCAATGAACCCATCATTTCTGAACTTATTAGGTGGTGCTCAAGCTTTGATGAACCCTGAATTGTTAAAGCTAGCCGCAACGGCCACATTATTAAATAGCAACATAAATTTGGGTTCACAGAATCAACAACAGATAAATAATGCTGCTAATGGTACTCAACAACAATTGCAAAATCAAGTTTACAATCAAGATCAATTTCAAATACCAACTCAAACCCACAATGCGAATAATGGCTTATTAGGAAACATGAGTTTTTCAAGTTCAGCTGAAAATACAAATCCTTGTTATTTTGGAGAGGATTTGATTTCTAAACAATATTCAGAATTGTTTCATTGCTTAAATAATGATGGAAACAAAAACAGTACGGGATATGAATCGGTTATATCGACTACTCCTTTATCGACGACACCAACACCATCACCAACATATGTGAATAGCTGCACAGAGGAAGAGAGAGATACATATTGCAGTGACTTATTCAAGTTCGAAATTCCAGAGAGTACTTTGGACATTAATGATTTCTTGTAA
Protein sequence

>MS.gene31548.t1

MNLFCLNIITGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEESIIQLHGVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSALLGGTNPMNPSFLNLLGGAQALMNPEFTGYESVISTTPLSTTPTPSPTYVNSCTEEERDTYCSDLFKFEIPESTLDINDFL