AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31895

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31895.t1 MTR_6g061070 67.951 493 96 6 317 802 33 470 0.0 640
MS.gene31895.t1 MTR_1g035520 56.908 304 111 8 317 607 87 383 7.59e-95 301
MS.gene31895.t1 MTR_1g035520 93.571 140 9 0 663 802 244 383 1.42e-86 280
MS.gene31895.t1 MTR_8g092510 87.821 156 13 2 146 295 206 361 2.15e-83 283
MS.gene31895.t1 MTR_8g092510 77.108 83 5 2 69 138 54 135 1.23e-25 114
MS.gene31895.t1 MTR_3g009480 85.897 156 16 2 146 295 195 350 6.19e-81 276
MS.gene31895.t1 MTR_3g009480 81.690 71 12 1 69 138 54 124 7.79e-25 111
MS.gene31895.t1 MTR_1g035480 63.125 160 37 2 317 476 32 169 6.79e-60 201
MS.gene31895.t1 MTR_1g033740 63.125 160 39 2 317 476 37 176 1.08e-59 201
MS.gene31895.t1 MTR_1g035500 60.625 160 44 2 317 476 40 180 2.47e-58 197
MS.gene31895.t1 MTR_1g035500 68.293 41 13 0 1 41 1 41 5.72e-11 62.8
MS.gene31895.t1 MTR_1g035640 33.202 506 255 16 318 802 21 464 3.82e-57 203
MS.gene31895.t1 MTR_1g035620 32.377 488 222 16 318 801 25 408 2.36e-53 191
MS.gene31895.t1 MTR_1g035510 44.939 247 108 6 317 560 1 222 4.56e-53 184
MS.gene31895.t1 MTR_1g035470 58.861 158 40 3 317 474 1 133 2.75e-49 170
MS.gene31895.t1 MTR_1g035570 33.229 319 157 10 318 620 21 299 4.97e-39 150
MS.gene31895.t1 MTR_1g035570 44.944 89 45 2 713 801 309 393 5.99e-14 75.1
MS.gene31895.t1 MTR_8g092500 62.205 127 8 1 69 195 24 110 4.98e-39 141
MS.gene31895.t1 MTR_1g050845 33.219 292 141 8 318 606 25 265 4.23e-35 144
MS.gene31895.t1 MTR_5g044670 29.299 314 189 10 314 620 28 315 2.06e-33 132
MS.gene31895.t1 MTR_1g035490 32.215 298 135 12 506 802 97 328 4.09e-31 125
MS.gene31895.t1 MTR_3g098790 31.699 306 171 11 315 610 24 301 2.55e-29 120
MS.gene31895.t1 MTR_7g050710 30.667 300 182 6 318 610 29 309 1.08e-28 118
MS.gene31895.t1 MTR_7g050580 30.333 300 168 8 317 610 28 292 7.32e-27 112
MS.gene31895.t1 MTR_1g108780 27.759 299 195 10 318 612 13 294 2.12e-26 114
MS.gene31895.t1 MTR_7g050720 30.690 290 175 9 317 594 25 300 4.36e-26 110
MS.gene31895.t1 MTR_7g050590 28.000 300 192 6 317 610 1 282 9.53e-26 108
MS.gene31895.t1 MTR_1g035650 35.841 226 101 9 303 522 13 200 3.23e-25 104
MS.gene31895.t1 MTR_4g119990 26.282 312 201 11 318 619 31 323 1.24e-24 107
MS.gene31895.t1 MTR_6g043890 29.787 282 168 11 318 592 31 289 1.32e-24 106
MS.gene31895.t1 MTR_3g061310 30.241 291 165 12 318 604 26 282 2.08e-24 104
MS.gene31895.t1 MTR_1g035540 66.667 69 19 1 551 619 13 77 1.50e-23 97.4
MS.gene31895.t1 MTR_3g061350 30.847 295 157 16 318 604 26 281 1.94e-23 101
MS.gene31895.t1 MTR_7g050560 29.221 308 161 11 317 610 28 292 1.42e-22 99.8
MS.gene31895.t1 MTR_3g061370 30.405 296 157 15 318 604 23 278 8.49e-22 96.7
MS.gene31895.t1 MTR_1g035460 24.759 311 217 7 317 621 1 300 1.79e-21 98.2
MS.gene31895.t1 MTR_8g103940 26.490 302 184 10 318 607 55 330 9.05e-20 94.0
MS.gene31895.t1 MTR_3g061320 29.210 291 162 13 318 604 26 276 1.42e-19 90.1
MS.gene31895.t1 MTR_3g061340 28.136 295 161 13 318 607 26 274 1.51e-19 90.1
MS.gene31895.t1 MTR_3g061330 31.019 216 113 10 318 529 26 209 2.41e-16 80.1
MS.gene31895.t1 MTR_3g061290 36.885 122 66 4 318 436 26 139 1.49e-14 73.6
MS.gene31895.t1 MTR_3g061220 37.624 101 49 2 318 416 26 114 4.96e-12 63.9
MS.gene31895.t1 MTR_1g035440 42.857 84 44 2 318 397 31 114 8.62e-12 66.6
MS.gene31895.t1 MTR_1g021435 22.468 316 195 12 318 594 38 342 2.09e-11 67.0
MS.gene31895.t1 MTR_1g021360 24.746 295 168 11 318 594 198 456 2.11e-11 67.4
MS.gene31895.t1 MTR_7g050640 41.860 86 47 2 309 391 20 105 4.30e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31895.t1 AT2G21790 54.221 308 60 9 69 295 54 361 1.51e-80 276
MS.gene31895.t1 AT3G18990 24.599 374 228 16 306 647 16 367 9.73e-18 86.3
MS.gene31895.t1 AT3G18990 24.768 323 197 13 306 596 16 324 2.16e-17 85.1
MS.gene31895.t1 AT4G33280 26.403 303 189 12 317 607 38 318 1.51e-13 73.2

Find 157 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACCCATTTGGAAGTTTA+AGG 0.148962 1.1:-19795259 None:intergenic
ATGGAATATGCGGGCAATTT+TGG 0.164513 1.1:+19799517 MS.gene31895:CDS
TTGGGTGCCTGATCTCTTTA+TGG 0.175397 1.1:+19794582 MS.gene31895:CDS
TCACTTGAGTAGTTGCTTCT+TGG 0.254873 1.1:+19794243 MS.gene31895:CDS
TTTGGAAGTTTAAGGGATAT+TGG 0.281020 1.1:-19795251 None:intergenic
TGCTGATATAGTTGACTTCT+TGG 0.294833 1.1:+19794501 MS.gene31895:CDS
TGCAATGCAGTGATGGTATT+TGG 0.296187 1.1:+19795300 MS.gene31895:CDS
ATGGTATTTGGCTTCAAAAT+TGG 0.298035 1.1:+19795312 MS.gene31895:CDS
TACGTGCCCATGGTTACATT+TGG 0.313598 1.1:+19794368 MS.gene31895:CDS
ACGTGCCCATGGTTACATTT+GGG 0.323530 1.1:+19794369 MS.gene31895:CDS
TATTCTTTCGAAAAGCAATT+AGG 0.323587 1.1:-19796492 None:intergenic
AGTTTAAGGGATATTGGATT+TGG 0.337634 1.1:-19795245 None:intergenic
TTATCACCTTCAACATGATA+TGG 0.351084 1.1:-19797320 None:intergenic
AGCAGCCAAGGATGCATAAT+CGG 0.351842 1.1:-19793880 None:intergenic
AATCTGACCCTCCTTTGTAT+TGG 0.356917 1.1:-19795379 None:intergenic
AAGAAGCATGGTATATTTAG+TGG 0.374789 1.1:+19799822 MS.gene31895:CDS
TATAATGAACATCTCGACTA+TGG 0.388378 1.1:+19799897 MS.gene31895:CDS
GGCATGGTTCCTTCGTGGTT+GGG 0.394000 1.1:-19796728 None:intergenic
TTGACCCCAACAATCTCATT+GGG 0.398282 1.1:-19794643 None:intergenic
AGACCCATTTGGAAGTTTAA+GGG 0.398720 1.1:-19795258 None:intergenic
TCTGCCCCAATGAGATTGTT+GGG 0.399972 1.1:+19794638 MS.gene31895:CDS
GGTTACATTTGGGGAACAAA+TGG 0.400707 1.1:+19794379 MS.gene31895:CDS
CTTGACCCCAACAATCTCAT+TGG 0.402730 1.1:-19794644 None:intergenic
GACAACACCCGTAAAAGATA+TGG 0.404989 1.1:+19799498 MS.gene31895:CDS
TTCTGCCCCAATGAGATTGT+TGG 0.411432 1.1:+19794637 MS.gene31895:CDS
CATCAAGAATGCGGCTCGAT+TGG 0.412162 1.1:+19794001 MS.gene31895:CDS
GGGCATGGTTCCTTCGTGGT+TGG 0.425016 1.1:-19796729 None:intergenic
TACCTCTCTACAAAATTTCT+CGG 0.425845 1.1:-19795209 None:intergenic
GGAACAAATGGAACGTCTAA+TGG 0.432244 1.1:+19794391 MS.gene31895:CDS
TGGAAAGAGTTCAGAGCAAT+GGG 0.432615 1.1:+19794602 MS.gene31895:CDS
ATAATACCTTGAAACTGCTC+AGG 0.432958 1.1:-19796750 None:intergenic
GCAGCCAAGGATGCATAATC+GGG 0.439835 1.1:-19793879 None:intergenic
ATAATAATTGTGAATGAAAG+TGG 0.448746 1.1:-19796702 None:intergenic
GGTCTGCGTGCAAAATGAAT+TGG 0.448911 1.1:+19795276 MS.gene31895:CDS
ATATCCCTTAAACTTCCAAA+TGG 0.449227 1.1:+19795254 MS.gene31895:CDS
TTAGAAGTGTTGGTGAGGAC+AGG 0.455257 1.1:+19796547 MS.gene31895:CDS
AGTAAATCTGCTGGAGGGAT+TGG 0.455606 1.1:+19794328 MS.gene31895:CDS
TTATTGCCATATCATGTTGA+AGG 0.460335 1.1:+19797314 MS.gene31895:CDS
TGCTTCTTCAACAGCTCACT+TGG 0.461685 1.1:-19799807 None:intergenic
GAATTTACATGAGATGTTCA+AGG 0.464486 1.1:+19799688 MS.gene31895:CDS
CTCAGGGCATGGTTCCTTCG+TGG 0.465138 1.1:-19796733 None:intergenic
CCACCCCGATTATGCATCCT+TGG 0.465793 1.1:+19793875 MS.gene31895:CDS
GGGGATTTATGATACATTGA+AGG 0.466284 1.1:+19794291 MS.gene31895:CDS
ATTATGCATCCTTGGCTGCT+AGG 0.472580 1.1:+19793883 MS.gene31895:CDS
CAACTACTCAAGTGAGGCCT+AGG 0.473485 1.1:-19794235 None:intergenic
GACTATGGTTGGTTCACTAA+AGG 0.474605 1.1:+19799912 MS.gene31895:CDS
CATTACATGTTTGCTTGTGA+AGG 0.477712 1.1:-19793672 None:intergenic
AAGGAACATGAGTTGAAAGT+TGG 0.478819 1.1:+19796645 MS.gene31895:CDS
TGAGAGTAGGGGAAGGAACA+TGG 0.483751 1.1:+19799859 MS.gene31895:CDS
CGAGTTGTTTGTGTTGAAGC+TGG 0.483809 1.1:-19793376 None:intergenic
TTATCGCCATGTCATGTTGA+AGG 0.488274 1.1:+19796061 MS.gene31895:CDS
GTCTGCGTGCAAAATGAATT+GGG 0.489112 1.1:+19795277 MS.gene31895:CDS
TGTGAGAGATTGCAAAGTAA+AGG 0.489991 1.1:+19799947 MS.gene31895:CDS
ATGAAAGAGGATAGTATTGA+GGG 0.496212 1.1:+19794271 MS.gene31895:CDS
CCATGCCCTGAGCAGTTTCA+AGG 0.498811 1.1:+19796744 MS.gene31895:CDS
CATTAAACTTTCGTAAAAGC+AGG 0.501843 1.1:+19796583 MS.gene31895:CDS
GCAACGGCGGCATTTACAAT+GGG 0.504133 1.1:+19793303 MS.gene31895:CDS
GGCAACGGCGGCATTTACAA+TGG 0.504266 1.1:+19793302 MS.gene31895:CDS
GGCGGCATTTACAATGGGCG+TGG 0.506008 1.1:+19793308 MS.gene31895:CDS
AGTGAAGCTAGGGTTCTCAT+TGG 0.506413 1.1:-19797285 None:intergenic
AGTGAAACTAGGACTCTCAT+TGG 0.512039 1.1:-19796032 None:intergenic
ATGGAAAGAGTTCAGAGCAA+TGG 0.512042 1.1:+19794601 MS.gene31895:CDS
CGTGCCCATGGTTACATTTG+GGG 0.512128 1.1:+19794370 MS.gene31895:CDS
CATGAAAGAGGATAGTATTG+AGG 0.513073 1.1:+19794270 MS.gene31895:CDS
TGCATAATCGGGGTGGTTAG+CGG 0.515425 1.1:-19793868 None:intergenic
ACTCTTTCCATAAAGAGATC+AGG 0.516899 1.1:-19794589 None:intergenic
TATCCCTTAAACTTCCAAAT+GGG 0.519149 1.1:+19795255 MS.gene31895:CDS
TTTGGCTTCAAAATTGGAAG+AGG 0.520115 1.1:+19795318 MS.gene31895:CDS
TAATGGAAACACAGGAGGCA+TGG 0.520474 1.1:+19795952 MS.gene31895:CDS
AATAATATGAGAGTGAAGCT+AGG 0.520491 1.1:-19797296 None:intergenic
TGTTGAAGGTGATAATAGAT+TGG 0.520882 1.1:+19796075 MS.gene31895:CDS
TGTGCAAAATCATGTGTTCA+AGG 0.521657 1.1:+19800001 MS.gene31895:CDS
TATCAGCATGCCATGGCTCC+AGG 0.523661 1.1:-19794486 None:intergenic
CTTCTTGGTGTGCATGAAAG+AGG 0.526579 1.1:+19794258 MS.gene31895:CDS
GTGAAGCTAGGGTTCTCATT+GGG 0.527042 1.1:-19797284 None:intergenic
TGATTGAACACACGCAGCAT+TGG 0.527196 1.1:-19794421 None:intergenic
GGGGTGGTTAGCGGTCATAC+AGG 0.532625 1.1:-19793859 None:intergenic
ATTACATGTTTGCTTGTGAA+GGG 0.534196 1.1:-19793671 None:intergenic
AGAGATTGCAAAGTAAAGGC+TGG 0.538378 1.1:+19799951 MS.gene31895:CDS
AAGGCAACAATTAGAAGTGT+TGG 0.542696 1.1:+19796537 MS.gene31895:CDS
AATGGAAACACAGGAGGCAT+GGG 0.543418 1.1:+19795953 MS.gene31895:CDS
TACATGAATGAGTTATTGCA+AGG 0.543984 1.1:+19796513 MS.gene31895:CDS
ATGAACATCTCGACTATGGT+TGG 0.544359 1.1:+19799901 MS.gene31895:CDS
ATTCCGTGGAGTTGAGAGTA+GGG 0.547073 1.1:+19799847 MS.gene31895:CDS
GTGAAACTAGGACTCTCATT+GGG 0.547777 1.1:-19796031 None:intergenic
CCTTGAAACTGCTCAGGGCA+TGG 0.548538 1.1:-19796744 None:intergenic
TTGCTGTGTACCTGGAGCCA+TGG 0.549073 1.1:+19794476 MS.gene31895:CDS
GCTGTCATTAGTAAATCTGC+TGG 0.558625 1.1:+19794319 MS.gene31895:CDS
TTGTTCCCCAAATGTAACCA+TGG 0.559225 1.1:-19794375 None:intergenic
ACTACTGCTGCTACACCTCA+AGG 0.560864 1.1:+19795605 MS.gene31895:CDS
TAGAAGTGTTGGTGAGGACA+GGG 0.562489 1.1:+19796548 MS.gene31895:CDS
AAAGAGATCAGGCACCCAAA+GGG 0.564159 1.1:-19794578 None:intergenic
GATAATTTGACAGTGAAACT+AGG 0.566923 1.1:-19796043 None:intergenic
CATACAGGCGGCGGTTTCAG+CGG 0.568521 1.1:-19793844 None:intergenic
TATATTTAGTGGAAATTCCG+TGG 0.570238 1.1:+19799833 MS.gene31895:CDS
AAAATTGGAAGAGGTTTGCA+TGG 0.571811 1.1:+19795327 MS.gene31895:CDS
ATGGTTGGTTCACTAAAGGT+TGG 0.573713 1.1:+19799916 MS.gene31895:CDS
CTAATGAAAACAGAGGAGGC+AGG 0.574849 1.1:+19797204 MS.gene31895:CDS
GTAAAAGATATGGAATATGC+GGG 0.574921 1.1:+19799508 MS.gene31895:CDS
TTGTGAATGTTACTCCCTTG+AGG 0.576438 1.1:-19795620 None:intergenic
GTCGCTCAGAAAGTTTGTGC+CGG 0.580015 1.1:+19793793 MS.gene31895:intron
AATTCCGTGGAGTTGAGAGT+AGG 0.585424 1.1:+19799846 MS.gene31895:CDS
GTTCACAACATACGTGCCCA+TGG 0.585675 1.1:+19794358 MS.gene31895:CDS
TGTTCCCCAAATGTAACCAT+GGG 0.588262 1.1:-19794374 None:intergenic
TTGAAGCTGGCGTTGTTGAA+CGG 0.590950 1.1:-19793363 None:intergenic
TTCTCCTACACTTTCAACGC+TGG 0.596342 1.1:+19794208 MS.gene31895:CDS
GCAGAGGCTAATGGAAACAC+AGG 0.596384 1.1:+19795944 MS.gene31895:intron
ATAATATGAGAGTGAAGCTA+GGG 0.600162 1.1:-19797295 None:intergenic
TAATGAAAACAGAGGAGGCA+GGG 0.600637 1.1:+19797205 MS.gene31895:CDS
CGTAAAAGATATGGAATATG+CGG 0.600766 1.1:+19799507 MS.gene31895:CDS
GCGGCATTTACAATGGGCGT+GGG 0.601464 1.1:+19793309 MS.gene31895:CDS
AACAATTAGAAGTGTTGGTG+AGG 0.601806 1.1:+19796542 MS.gene31895:CDS
TTTGCATGGTCGCTCCGATG+TGG 0.602338 1.1:+19795341 MS.gene31895:CDS
TGAAATTATCATCAAGAATG+CGG 0.602682 1.1:+19793992 MS.gene31895:CDS
TAAAGAGATCAGGCACCCAA+AGG 0.610062 1.1:-19794579 None:intergenic
GTTAGCGGTCATACAGGCGG+CGG 0.615094 1.1:-19793853 None:intergenic
CTGCCCCAATGAGATTGTTG+GGG 0.615255 1.1:+19794639 MS.gene31895:CDS
AACAGCAATCCTAGCAGCCA+AGG 0.615588 1.1:-19793892 None:intergenic
GTCATTAGTAAATCTGCTGG+AGG 0.617415 1.1:+19794322 MS.gene31895:CDS
AATTGGGTGCAATGCAGTGA+TGG 0.617555 1.1:+19795293 MS.gene31895:CDS
AGTGAGCTGTTGAAGAAGCA+TGG 0.617628 1.1:+19799810 MS.gene31895:CDS
TATTCAAGTATGAGATGCAA+CGG 0.618523 1.1:+19795443 MS.gene31895:CDS
AATCTCATTGGGGCAGAACA+AGG 0.622905 1.1:-19794632 None:intergenic
CTTTCAACGCTGGAACACCT+AGG 0.623357 1.1:+19794218 MS.gene31895:CDS
GTGGTTAGCGGTCATACAGG+CGG 0.624764 1.1:-19793856 None:intergenic
TAATACCTTGAAACTGCTCA+GGG 0.625384 1.1:-19796749 None:intergenic
GTGTTGGTGAGGACAGGGCA+TGG 0.626789 1.1:+19796553 MS.gene31895:CDS
TTCCCCTACTCTCAACTCCA+CGG 0.627106 1.1:-19799850 None:intergenic
GGAAGGAACATGGTTTGTAG+AGG 0.629163 1.1:+19799869 MS.gene31895:CDS
TGTTCCAGCGTTGAAAGTGT+AGG 0.629278 1.1:-19794212 None:intergenic
GCATGTTATGTTGATCAGAA+AGG 0.634303 1.1:+19794448 MS.gene31895:CDS
TTTCAACAACAACACGGCAA+CGG 0.635953 1.1:+19793287 MS.gene31895:CDS
GAATGAGTTATTGCAAGGGA+AGG 0.643476 1.1:+19796518 MS.gene31895:CDS
CTACTGCTGCTACACCTCAA+GGG 0.653810 1.1:+19795606 MS.gene31895:CDS
GCAGAGACTAATGAAAACAG+AGG 0.657129 1.1:+19797197 MS.gene31895:intron
TATTATTATCCCAACCACGA+AGG 0.659077 1.1:+19796719 MS.gene31895:CDS
TTATCACCTTCAACATGACA+TGG 0.659419 1.1:-19796067 None:intergenic
GGGCGTGGGAGTGAAGCTCA+AGG 0.660198 1.1:+19793323 MS.gene31895:CDS
TTCCGTGGAGTTGAGAGTAG+GGG 0.660437 1.1:+19799848 MS.gene31895:CDS
ACATGAATGAGTTATTGCAA+GGG 0.661417 1.1:+19796514 MS.gene31895:CDS
CAACAACAACACGGCAACGG+CGG 0.664470 1.1:+19793290 MS.gene31895:CDS
TCAACTATATCAGCATGCCA+TGG 0.671085 1.1:-19794493 None:intergenic
TCATTAGTAAATCTGCTGGA+GGG 0.679752 1.1:+19794323 MS.gene31895:CDS
TGACCCCAACAATCTCATTG+GGG 0.681151 1.1:-19794642 None:intergenic
AAGAAGCAACTACTCAAGTG+AGG 0.683257 1.1:-19794241 None:intergenic
GTGGAGTTGAGAGTAGGGGA+AGG 0.685462 1.1:+19799852 MS.gene31895:CDS
CCAAGGATGCATAATCGGGG+TGG 0.693063 1.1:-19793875 None:intergenic
TGAAAGAGGATAGTATTGAG+GGG 0.695012 1.1:+19794272 MS.gene31895:CDS
TCTTATAACATCATCAGACA+AGG 0.698207 1.1:+19799712 MS.gene31895:CDS
AAACTAAAAGATCTCCACAT+CGG 0.700040 1.1:-19795355 None:intergenic
GAGGCTAATGGAAACACAGG+AGG 0.702704 1.1:+19795947 MS.gene31895:intron
GAGACTAATGAAAACAGAGG+AGG 0.703693 1.1:+19797200 MS.gene31895:intron
TGGACATGTGCAGAAAACCA+AGG 0.707757 1.1:+19799457 MS.gene31895:intron
CAAGACGACTTTGTAAACGC+CGG 0.714826 1.1:-19793812 None:intergenic
ATGTCGTTTCAACAACAACA+CGG 0.718899 1.1:+19793281 MS.gene31895:CDS
ACATCATCAGCAATCAACAA+CGG 0.718982 1.1:-19793966 None:intergenic
CAGCCAAGGATGCATAATCG+GGG 0.721826 1.1:-19793878 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATATACAAATTTTTCA+AGG + chr1.1:19799234-19799253 MS.gene31895:intron 10.0%
!! AAAAATATACATAAATAGAG+TGG - chr1.1:19797063-19797082 None:intergenic 15.0%
!! AAAATATACATAAATAGAGT+GGG - chr1.1:19797062-19797081 None:intergenic 15.0%
!! TGCTTGTAATAAATTAATTA+AGG - chr1.1:19798668-19798687 None:intergenic 15.0%
!!! AACAAATTAAATTTTATACG+TGG - chr1.1:19799762-19799781 None:intergenic 15.0%
!!! ATATTTTAAGGTTTAAATCT+TGG + chr1.1:19798144-19798163 MS.gene31895:intron 15.0%
!!! ATTAATGAGAAAAAAAGTAT+AGG - chr1.1:19797361-19797380 None:intergenic 15.0%
!!! CAAATGTGTAAAATATTTTA+AGG + chr1.1:19798132-19798151 MS.gene31895:intron 15.0%
!!! CTATTTTATTTTACAGTTAT+TGG - chr1.1:19799050-19799069 None:intergenic 15.0%
!! AAAAAGAGAATCAATTCAAA+TGG + chr1.1:19795575-19795594 MS.gene31895:CDS 20.0%
!! AACAAAGAAAACATAGTTTA+AGG - chr1.1:19799641-19799660 None:intergenic 20.0%
!! ACTAATTGAAAACATATTCA+AGG + chr1.1:19796248-19796267 MS.gene31895:intron 20.0%
!! ATAATAATTGTGAATGAAAG+TGG - chr1.1:19796705-19796724 None:intergenic 20.0%
!! ATAGTGAGATAATATATGAT+AGG + chr1.1:19794024-19794043 MS.gene31895:intron 20.0%
!! CAAGAATAATGATATCTAAT+TGG - chr1.1:19793547-19793566 None:intergenic 20.0%
!! GATTTCATCTTAAATAAAGT+GGG - chr1.1:19795838-19795857 None:intergenic 20.0%
!! GTTAAAAATAAATCATGGAA+AGG + chr1.1:19794525-19794544 MS.gene31895:CDS 20.0%
!! TAAACAGATGAATGAATAAA+AGG - chr1.1:19795703-19795722 None:intergenic 20.0%
!! TACTAACAAAAACATATTCA+AGG + chr1.1:19797500-19797519 MS.gene31895:intron 20.0%
!! TAGTGAGATAATATATGATA+GGG + chr1.1:19794025-19794044 MS.gene31895:intron 20.0%
!! TATTAACAAGAGAAACATTT+GGG - chr1.1:19796210-19796229 None:intergenic 20.0%
!! TATTACAGAAAAAGTAGTAT+AGG - chr1.1:19796108-19796127 None:intergenic 20.0%
!! TGATTTCATCTTAAATAAAG+TGG - chr1.1:19795839-19795858 None:intergenic 20.0%
!! TTATTCATTCATCTGTTTAT+GGG + chr1.1:19795704-19795723 MS.gene31895:intron 20.0%
!! TTGGAGTTAAAAATAAATCA+TGG + chr1.1:19794520-19794539 MS.gene31895:CDS 20.0%
!! TTTATTCATTCATCTGTTTA+TGG + chr1.1:19795703-19795722 MS.gene31895:intron 20.0%
!!! AAATAAACACATTGATTTTG+TGG - chr1.1:19796966-19796985 None:intergenic 20.0%
!!! AATAAACACATTGATTTTGT+GGG - chr1.1:19796965-19796984 None:intergenic 20.0%
!!! AATTGAAACTTTCTAGTTAT+TGG - chr1.1:19794916-19794935 None:intergenic 20.0%
!!! AATTTGTATGGATTAAAAAG+TGG - chr1.1:19795788-19795807 None:intergenic 20.0%
!!! ATTGATTTTCTTTTTCTTGA+TGG - chr1.1:19796904-19796923 None:intergenic 20.0%
!!! CCAAGATTAATTTTTATACA+CGG + chr1.1:19799293-19799312 MS.gene31895:intron 20.0%
!!! GAGAAAGAAGTTTATTTTAA+TGG - chr1.1:19798642-19798661 None:intergenic 20.0%
!!! GATTTTAGTCATTCTAATAA+TGG + chr1.1:19799157-19799176 MS.gene31895:intron 20.0%
!!! GTATACTTTTGTAATTTGTA+TGG - chr1.1:19795800-19795819 None:intergenic 20.0%
!!! GTATGTATGAATTTAATTTC+AGG - chr1.1:19793597-19793616 None:intergenic 20.0%
!!! TAACAAAAGAGAAAAAGTAT+AGG + chr1.1:19797552-19797571 MS.gene31895:intron 20.0%
!!! TATTCTTTTGAAAACCATTT+AGG - chr1.1:19797741-19797760 None:intergenic 20.0%
!!! TTGATTTTCTTTTTCTTGAT+GGG - chr1.1:19796903-19796922 None:intergenic 20.0%
!!! TTTTGTATGGATTAAAAAGT+GGG - chr1.1:19797019-19797038 None:intergenic 20.0%
! AAATGCACAAAAACTAAAGA+TGG + chr1.1:19797233-19797252 MS.gene31895:CDS 25.0%
! AATGCACAAAAACTAAAGAT+GGG + chr1.1:19797234-19797253 MS.gene31895:CDS 25.0%
! AATTTGATACATTTAAGCAG+TGG + chr1.1:19797643-19797662 MS.gene31895:intron 25.0%
! AGTGAGATAATATATGATAG+GGG + chr1.1:19794026-19794045 MS.gene31895:intron 25.0%
! ATGTTAATGTTACTGTCATT+AGG + chr1.1:19798262-19798281 MS.gene31895:intron 25.0%
! ATTAACAAGAGAAACATTTG+GGG - chr1.1:19796209-19796228 None:intergenic 25.0%
! CAAAAAAGATTATTCAAGCA+CGG + chr1.1:19794709-19794728 MS.gene31895:CDS 25.0%
! CCGTGTATAAAAATTAATCT+TGG - chr1.1:19799296-19799315 None:intergenic 25.0%
! CTATTAACAAGAGAAACATT+TGG - chr1.1:19796211-19796230 None:intergenic 25.0%
! CTATTATCAAATGAGACATT+TGG - chr1.1:19797464-19797483 None:intergenic 25.0%
! TACACTTAAAAATGTGGATA+GGG + chr1.1:19795026-19795045 MS.gene31895:intron 25.0%
! TATTCTTTCGAAAAGCAATT+AGG - chr1.1:19796495-19796514 None:intergenic 25.0%
! TGAAATTATCATCAAGAATG+CGG + chr1.1:19793992-19794011 MS.gene31895:CDS 25.0%
! TGTTAATGTTACTGTCATTA+GGG + chr1.1:19798263-19798282 MS.gene31895:intron 25.0%
! TTAAACACACTATCATCTAT+CGG - chr1.1:19799092-19799111 None:intergenic 25.0%
! TTTGTTCATATATATGCAGT+TGG + chr1.1:19799776-19799795 MS.gene31895:intron 25.0%
!! AAATTATTTTCAGCACTTGA+AGG - chr1.1:19797167-19797186 None:intergenic 25.0%
!! AACTATTTTCAGCATTTGAA+AGG - chr1.1:19795913-19795932 None:intergenic 25.0%
!! ATAGATGATAGTGTGTTTAA+GGG + chr1.1:19799092-19799111 MS.gene31895:intron 25.0%
!! ATGAGATTTTATGACAGTAA+GGG - chr1.1:19798983-19799002 None:intergenic 25.0%
!! CAAAATTTGAGATGAACTAA+GGG - chr1.1:19795749-19795768 None:intergenic 25.0%
!! TGATTTTCTTTTTCTTGATG+GGG - chr1.1:19796902-19796921 None:intergenic 25.0%
!! TTAAAACATGTGCTTTTGTA+TGG - chr1.1:19797032-19797051 None:intergenic 25.0%
!! TTATTATTTTCATCGTCACT+GGG - chr1.1:19796876-19796895 None:intergenic 25.0%
!! TTTATTATTTTCATCGTCAC+TGG - chr1.1:19796877-19796896 None:intergenic 25.0%
!! TTTGATTGATTGTAGTTTGT+TGG - chr1.1:19798116-19798135 None:intergenic 25.0%
!!! AAATCCTTACATGCTTTTTA+GGG + chr1.1:19794773-19794792 MS.gene31895:intron 25.0%
!!! AATTGATTCTCTTTTTCTTG+AGG - chr1.1:19795571-19795590 None:intergenic 25.0%
!!! ATAAACACATTGATTTTGTG+GGG - chr1.1:19796964-19796983 None:intergenic 25.0%
!!! ATCTTTTTCTGAAACTGTTA+AGG + chr1.1:19793941-19793960 MS.gene31895:CDS 25.0%
!!! ATTGATTCTCTTTTTCTTGA+GGG - chr1.1:19795570-19795589 None:intergenic 25.0%
!!! ATTGTCATGTTTACCTTTTT+TGG + chr1.1:19798596-19798615 MS.gene31895:intron 25.0%
!!! CTTTTAGTTTTCCAATACAA+AGG + chr1.1:19795368-19795387 MS.gene31895:CDS 25.0%
!!! CTTTTGTATGGATTAAAAAG+TGG - chr1.1:19797020-19797039 None:intergenic 25.0%
!!! GTTTTTAGTATCAGACTTTT+AGG - chr1.1:19795121-19795140 None:intergenic 25.0%
!!! TACAAAAACACATGGTTTTA+GGG + chr1.1:19799561-19799580 MS.gene31895:CDS 25.0%
!!! TAGTTTTTAAAGTTTTGCAG+AGG + chr1.1:19795928-19795947 MS.gene31895:intron 25.0%
!!! TATATTTTCTCTGTTAGCTT+TGG + chr1.1:19794966-19794985 MS.gene31895:intron 25.0%
AAACAACAGTAATAAGTGGA+CGG - chr1.1:19798455-19798474 None:intergenic 30.0%
AAACTAAAAGATCTCCACAT+CGG - chr1.1:19795358-19795377 None:intergenic 30.0%
AACGCAATAAAATAGAGCTT+GGG - chr1.1:19798230-19798249 None:intergenic 30.0%
AATAATATGAGAGTGAAGCT+AGG - chr1.1:19797299-19797318 None:intergenic 30.0%
AATCTCATGATGAAGGATAA+TGG + chr1.1:19798995-19799014 MS.gene31895:intron 30.0%
ACACAAACAACAGTAATAAG+TGG - chr1.1:19798459-19798478 None:intergenic 30.0%
ACATGAATGAGTTATTGCAA+GGG + chr1.1:19796514-19796533 MS.gene31895:CDS 30.0%
ACTATACGAACTGATTGTAT+TGG + chr1.1:19797421-19797440 MS.gene31895:intron 30.0%
AGTTTAAGGGATATTGGATT+TGG - chr1.1:19795248-19795267 None:intergenic 30.0%
ATAATATGAGAGTGAAGCTA+GGG - chr1.1:19797298-19797317 None:intergenic 30.0%
ATATCCCTTAAACTTCCAAA+TGG + chr1.1:19795254-19795273 MS.gene31895:CDS 30.0%
ATGTAATCATCCTTATCAAG+AGG + chr1.1:19793692-19793711 MS.gene31895:intron 30.0%
ATTACATGTTTGCTTGTGAA+GGG - chr1.1:19793674-19793693 None:intergenic 30.0%
ATTTAGGTATCATCTGTTTC+AGG - chr1.1:19797725-19797744 None:intergenic 30.0%
CATTAAACTTTCGTAAAAGC+AGG + chr1.1:19796583-19796602 MS.gene31895:CDS 30.0%
CGTAAAAGATATGGAATATG+CGG + chr1.1:19799507-19799526 MS.gene31895:CDS 30.0%
CGTAACAAATACTTGTTCAA+CGG + chr1.1:19798326-19798345 MS.gene31895:intron 30.0%
CTAAAAGTGATATATCTGCT+AGG + chr1.1:19799324-19799343 MS.gene31895:intron 30.0%
GAATTTACATGAGATGTTCA+AGG + chr1.1:19799688-19799707 MS.gene31895:CDS 30.0%
GAGATATGAAAAGCCAAAAA+AGG - chr1.1:19798612-19798631 None:intergenic 30.0%
GATAATTTGACAGTGAAACT+AGG - chr1.1:19796046-19796065 None:intergenic 30.0%
GTAAAAGATATGGAATATGC+GGG + chr1.1:19799508-19799527 MS.gene31895:CDS 30.0%
GTACACTTAAAAATGTGGAT+AGG + chr1.1:19795025-19795044 MS.gene31895:intron 30.0%
GTCATAAAATCTCATGATGA+AGG + chr1.1:19798988-19799007 MS.gene31895:intron 30.0%
TACATGAATGAGTTATTGCA+AGG + chr1.1:19796513-19796532 MS.gene31895:CDS 30.0%
TACCTCTCTACAAAATTTCT+CGG - chr1.1:19795212-19795231 None:intergenic 30.0%
TACTGGTACACTTAAAAATG+TGG + chr1.1:19795020-19795039 MS.gene31895:intron 30.0%
TATAATGAACATCTCGACTA+TGG + chr1.1:19799897-19799916 MS.gene31895:CDS 30.0%
TATATTTAGTGGAAATTCCG+TGG + chr1.1:19799833-19799852 MS.gene31895:CDS 30.0%
TATCCCTTAAACTTCCAAAT+GGG + chr1.1:19795255-19795274 MS.gene31895:CDS 30.0%
TATTCAAGTATGAGATGCAA+CGG + chr1.1:19795443-19795462 MS.gene31895:CDS 30.0%
TCTTATAACATCATCAGACA+AGG + chr1.1:19799712-19799731 MS.gene31895:CDS 30.0%
TCTTATCTGTTGAAAGTTGA+AGG + chr1.1:19794089-19794108 MS.gene31895:intron 30.0%
TGAAACAGATGATACCTAAA+TGG + chr1.1:19797724-19797743 MS.gene31895:intron 30.0%
TGTTGAAGGTGATAATAGAT+TGG + chr1.1:19796075-19796094 MS.gene31895:CDS 30.0%
TTAACTATATGTACTGTGCA+AGG - chr1.1:19797679-19797698 None:intergenic 30.0%
TTATCACCTTCAACATGATA+TGG - chr1.1:19797323-19797342 None:intergenic 30.0%
TTATTGCCATATCATGTTGA+AGG + chr1.1:19797314-19797333 MS.gene31895:CDS 30.0%
TTTGGAAGTTTAAGGGATAT+TGG - chr1.1:19795254-19795273 None:intergenic 30.0%
! AAGAAAACAACACACACTTT+TGG + chr1.1:19793400-19793419 MS.gene31895:intron 30.0%
! AAGAAGCATGGTATATTTAG+TGG + chr1.1:19799822-19799841 MS.gene31895:CDS 30.0%
! ACTTACCTGAAACTTTTTGT+TGG - chr1.1:19795670-19795689 None:intergenic 30.0%
! AGTATTTGTTACGGTTATGT+CGG - chr1.1:19798319-19798338 None:intergenic 30.0%
! ATCCAGAATAAGTTTTCGAA+TGG + chr1.1:19797847-19797866 MS.gene31895:intron 30.0%
! ATGAAAGAGGATAGTATTGA+GGG + chr1.1:19794271-19794290 MS.gene31895:CDS 30.0%
! ATGGTATTTGGCTTCAAAAT+TGG + chr1.1:19795312-19795331 MS.gene31895:CDS 30.0%
! CATGAGATTTTATGACAGTA+AGG - chr1.1:19798984-19799003 None:intergenic 30.0%
! CCAAAATTTGAGATGAACTA+AGG - chr1.1:19795750-19795769 None:intergenic 30.0%
! CCTTAGTTCATCTCAAATTT+TGG + chr1.1:19795747-19795766 MS.gene31895:intron 30.0%
! CGCATATTCCATATCTTTTA+CGG - chr1.1:19799509-19799528 None:intergenic 30.0%
! CGTTGAACAAGTATTTGTTA+CGG - chr1.1:19798328-19798347 None:intergenic 30.0%
! CTTACCTGAAACTTTTTGTT+GGG - chr1.1:19795669-19795688 None:intergenic 30.0%
! GATAGATGATAGTGTGTTTA+AGG + chr1.1:19799091-19799110 MS.gene31895:intron 30.0%
! GCATATTCCATATCTTTTAC+GGG - chr1.1:19799508-19799527 None:intergenic 30.0%
! GTACAAAAACACATGGTTTT+AGG + chr1.1:19799560-19799579 MS.gene31895:CDS 30.0%
! TAGTTTTCCAATACAAAGGA+GGG + chr1.1:19795372-19795391 MS.gene31895:CDS 30.0%
! TCCAGAATAAGTTTTCGAAT+GGG + chr1.1:19797848-19797867 MS.gene31895:intron 30.0%
! TGAGATTTTATGACAGTAAG+GGG - chr1.1:19798982-19799001 None:intergenic 30.0%
! TTGATTCTCTTTTTCTTGAG+GGG - chr1.1:19795569-19795588 None:intergenic 30.0%
! TTTAGTATCAGACTTTTAGG+TGG - chr1.1:19795118-19795137 None:intergenic 30.0%
!! AGACTTTTAGGTGGAAAAAT+GGG - chr1.1:19795109-19795128 None:intergenic 30.0%
!! ATTTTGGAGATGGAATTTCA+AGG + chr1.1:19799533-19799552 MS.gene31895:CDS 30.0%
!! CTTTCTAGTTATTGGTTCAA+AGG - chr1.1:19794908-19794927 None:intergenic 30.0%
!! GAAATCCTTACATGCTTTTT+AGG + chr1.1:19794772-19794791 MS.gene31895:intron 30.0%
!! GAAATTTTGTAGAGAGGTAT+TGG + chr1.1:19795213-19795232 MS.gene31895:CDS 30.0%
!! GGTTCATTTTGACAAGATAA+CGG + chr1.1:19793716-19793735 MS.gene31895:intron 30.0%
!! TTAGTATTTTCAGTGTCACT+AGG - chr1.1:19795542-19795561 None:intergenic 30.0%
!! TTAGTTTTCCAATACAAAGG+AGG + chr1.1:19795371-19795390 MS.gene31895:CDS 30.0%
!!! AAAAGCACATGTTTTAATCC+TGG + chr1.1:19797035-19797054 MS.gene31895:intron 30.0%
!!! ACAAAAACACATGGTTTTAG+GGG + chr1.1:19799562-19799581 MS.gene31895:CDS 30.0%
!!! AGATTTATTTTACGCCCTTT+GGG + chr1.1:19794564-19794583 MS.gene31895:CDS 30.0%
!!! TCACTGTTTTGATGAAATGA+TGG + chr1.1:19793499-19793518 MS.gene31895:intron 30.0%
AAAATCAACCAGCAGAATCT+GGG + chr1.1:19794810-19794829 MS.gene31895:intron 35.0%
AAAATTGGAAGAGGTTTGCA+TGG + chr1.1:19795327-19795346 MS.gene31895:CDS 35.0%
AACAACAGTAATAAGTGGAC+GGG - chr1.1:19798454-19798473 None:intergenic 35.0%
AACTAGCAGAAGAGACATTT+AGG + chr1.1:19796354-19796373 MS.gene31895:intron 35.0%
AAGTTGAAGGAGTGATAAAG+AGG + chr1.1:19794102-19794121 MS.gene31895:intron 35.0%
ACAAATACTTGTTCAACGGT+CGG + chr1.1:19798330-19798349 MS.gene31895:intron 35.0%
ACATCATCAGCAATCAACAA+CGG - chr1.1:19793969-19793988 None:intergenic 35.0%
ACGCAATAAAATAGAGCTTG+GGG - chr1.1:19798229-19798248 None:intergenic 35.0%
ACTCTTTCCATAAAGAGATC+AGG - chr1.1:19794592-19794611 None:intergenic 35.0%
AGACCCATTTGGAAGTTTAA+GGG - chr1.1:19795261-19795280 None:intergenic 35.0%
AGAGAGAAGAAACAATCACA+GGG + chr1.1:19798720-19798739 MS.gene31895:intron 35.0%
AGGTTGAAGAAACTGAGTTA+TGG + chr1.1:19793741-19793760 MS.gene31895:intron 35.0%
AGTTGAAGGAGTGATAAAGA+GGG + chr1.1:19794103-19794122 MS.gene31895:intron 35.0%
ATAATACCTTGAAACTGCTC+AGG - chr1.1:19796753-19796772 None:intergenic 35.0%
ATAGCAATCGTGAATGAAAG+TGG - chr1.1:19797953-19797972 None:intergenic 35.0%
ATTGTTTGCTCAGGTATTAC+TGG + chr1.1:19795003-19795022 MS.gene31895:intron 35.0%
CAAATCAGTTTCACATGGTT+TGG + chr1.1:19798382-19798401 MS.gene31895:intron 35.0%
CAACGCAATAAAATAGAGCT+TGG - chr1.1:19798231-19798250 None:intergenic 35.0%
CATGAAAGAGGATAGTATTG+AGG + chr1.1:19794270-19794289 MS.gene31895:CDS 35.0%
CATTACATGTTTGCTTGTGA+AGG - chr1.1:19793675-19793694 None:intergenic 35.0%
GCATGTTATGTTGATCAGAA+AGG + chr1.1:19794448-19794467 MS.gene31895:CDS 35.0%
GGGGATTTATGATACATTGA+AGG + chr1.1:19794291-19794310 MS.gene31895:CDS 35.0%
GGTTTCTGTTGAAATTCACA+AGG + chr1.1:19794124-19794143 MS.gene31895:intron 35.0%
TAATACCTTGAAACTGCTCA+GGG - chr1.1:19796752-19796771 None:intergenic 35.0%
TAATCATCCTTATCAAGAGG+CGG + chr1.1:19793695-19793714 MS.gene31895:intron 35.0%
TACACTCAGTATGAAAAAGC+AGG + chr1.1:19794681-19794700 MS.gene31895:CDS 35.0%
TATTATTATCCCAACCACGA+AGG + chr1.1:19796719-19796738 MS.gene31895:CDS 35.0%
TCATCAAAACAGTGAGTGTT+GGG - chr1.1:19793494-19793513 None:intergenic 35.0%
TCATTAGTAAATCTGCTGGA+GGG + chr1.1:19794323-19794342 MS.gene31895:CDS 35.0%
TCCCATTCGAAAACTTATTC+TGG - chr1.1:19797852-19797871 None:intergenic 35.0%
TCTATGTGTATTGTTTGCTC+AGG + chr1.1:19794994-19795013 MS.gene31895:intron 35.0%
TCTGATCTACAGATGTTCTT+CGG + chr1.1:19798911-19798930 MS.gene31895:intron 35.0%
TGAGACAAATCAGTTTCACA+TGG + chr1.1:19798377-19798396 MS.gene31895:intron 35.0%
TGTGAGAGATTGCAAAGTAA+AGG + chr1.1:19799947-19799966 MS.gene31895:CDS 35.0%
TGTGCAAAATCATGTGTTCA+AGG + chr1.1:19800001-19800020 MS.gene31895:CDS 35.0%
TTATCACCTTCAACATGACA+TGG - chr1.1:19796070-19796089 None:intergenic 35.0%
TTCATCAAAACAGTGAGTGT+TGG - chr1.1:19793495-19793514 None:intergenic 35.0%
TTCTGTCAAAATGGAATGAG+CGG + chr1.1:19798420-19798439 MS.gene31895:intron 35.0%
TTGTATTCAAAACCCTAGAG+AGG + chr1.1:19794066-19794085 MS.gene31895:intron 35.0%
! AAGGAACATGAGTTGAAAGT+TGG + chr1.1:19796645-19796664 MS.gene31895:CDS 35.0%
! AAGGCAACAATTAGAAGTGT+TGG + chr1.1:19796537-19796556 MS.gene31895:CDS 35.0%
! AATTAGGTATCGTCTGTTTC+AGG - chr1.1:19796479-19796498 None:intergenic 35.0%
! ATAAGTTTTCGAATGGGAAG+TGG + chr1.1:19797854-19797873 MS.gene31895:intron 35.0%
! ATGTCGTTTCAACAACAACA+CGG + chr1.1:19793281-19793300 MS.gene31895:CDS 35.0%
! CAAGCTCTATTTTATTGCGT+TGG + chr1.1:19798229-19798248 MS.gene31895:intron 35.0%
! TAAAGTTTTGCAGAGGCTAA+TGG + chr1.1:19795935-19795954 MS.gene31895:intron 35.0%
! TCATGATGAAGGATAATGGT+GGG + chr1.1:19798999-19799018 MS.gene31895:intron 35.0%
! TGAAAGAGGATAGTATTGAG+GGG + chr1.1:19794272-19794291 MS.gene31895:CDS 35.0%
! TGCTGATATAGTTGACTTCT+TGG + chr1.1:19794501-19794520 MS.gene31895:CDS 35.0%
! TTCCGAGAAATTTTGTAGAG+AGG + chr1.1:19795207-19795226 MS.gene31895:CDS 35.0%
! TTTGGCTTCAAAATTGGAAG+AGG + chr1.1:19795318-19795337 MS.gene31895:CDS 35.0%
!! AACAATTAGAAGTGTTGGTG+AGG + chr1.1:19796542-19796561 MS.gene31895:CDS 35.0%
!! CAGACTTTTAGGTGGAAAAA+TGG - chr1.1:19795110-19795129 None:intergenic 35.0%
!! TGGTTGGAAGTCATTTTCAA+AGG + chr1.1:19796626-19796645 MS.gene31895:CDS 35.0%
!! TTTTTAGGGATGCTTGCAAT+AGG + chr1.1:19794787-19794806 MS.gene31895:intron 35.0%
!!! GAGATTTATTTTACGCCCTT+TGG + chr1.1:19794563-19794582 MS.gene31895:CDS 35.0%
AAATGAACCGCCTCTTGATA+AGG - chr1.1:19793705-19793724 None:intergenic 40.0%
AAGAAGCAACTACTCAAGTG+AGG - chr1.1:19794244-19794263 None:intergenic 40.0%
AAGTCATCAAATCTGTGCAC+TGG + chr1.1:19794840-19794859 MS.gene31895:intron 40.0%
AATCTGACCCTCCTTTGTAT+TGG - chr1.1:19795382-19795401 None:intergenic 40.0%
ACATACATTGGACAGTGTGT+AGG - chr1.1:19798543-19798562 None:intergenic 40.0%
ACATGTCCACAAACTTCTCA+GGG - chr1.1:19799446-19799465 None:intergenic 40.0%
ACTTTCTGAGCGACTAAAAC+AGG - chr1.1:19793787-19793806 None:intergenic 40.0%
AGAGATTGCAAAGTAAAGGC+TGG + chr1.1:19799951-19799970 MS.gene31895:CDS 40.0%
AGGAGCTGTACAAAAACACA+TGG + chr1.1:19799553-19799572 MS.gene31895:CDS 40.0%
AGGGATCTACTGAAGAAGTT+GGG - chr1.1:19799427-19799446 None:intergenic 40.0%
AGTCATCAAATCTGTGCACT+GGG + chr1.1:19794841-19794860 MS.gene31895:intron 40.0%
AGTGAAACTAGGACTCTCAT+TGG - chr1.1:19796035-19796054 None:intergenic 40.0%
ATGAACATCTCGACTATGGT+TGG + chr1.1:19799901-19799920 MS.gene31895:CDS 40.0%
ATGGAAAGAGTTCAGAGCAA+TGG + chr1.1:19794601-19794620 MS.gene31895:CDS 40.0%
ATGTATGTGTGCCATCAAAC+AGG + chr1.1:19798555-19798574 MS.gene31895:intron 40.0%
CAACAGATAAGACCTCTCTA+GGG - chr1.1:19794081-19794100 None:intergenic 40.0%
CAATACCTTGAAACTTCTCC+GGG - chr1.1:19798000-19798019 None:intergenic 40.0%
CAGACCCATTTGGAAGTTTA+AGG - chr1.1:19795262-19795281 None:intergenic 40.0%
CAGAGAGAAGAAACAATCAC+AGG + chr1.1:19798719-19798738 MS.gene31895:intron 40.0%
CATACATTGGACAGTGTGTA+GGG - chr1.1:19798542-19798561 None:intergenic 40.0%
CGCAATAAAATAGAGCTTGG+GGG - chr1.1:19798228-19798247 None:intergenic 40.0%
CTTTCTGAGCGACTAAAACA+GGG - chr1.1:19793786-19793805 None:intergenic 40.0%
GAAAATCAACCAGCAGAATC+TGG + chr1.1:19794809-19794828 MS.gene31895:intron 40.0%
GAATGAGTTATTGCAAGGGA+AGG + chr1.1:19796518-19796537 MS.gene31895:CDS 40.0%
GACAACACCCGTAAAAGATA+TGG + chr1.1:19799498-19799517 MS.gene31895:CDS 40.0%
GAGACTAATGAAAACAGAGG+AGG + chr1.1:19797200-19797219 MS.gene31895:intron 40.0%
GAGATGAGAGATATACAGAG+AGG + chr1.1:19798761-19798780 MS.gene31895:intron 40.0%
GCAACCCAACAAAAAGTTTC+AGG + chr1.1:19795662-19795681 MS.gene31895:CDS 40.0%
GCAATACCTTGAAACTTCTC+CGG - chr1.1:19798001-19798020 None:intergenic 40.0%
GCAGAGACTAATGAAAACAG+AGG + chr1.1:19797197-19797216 MS.gene31895:intron 40.0%
GCTGTCATTAGTAAATCTGC+TGG + chr1.1:19794319-19794338 MS.gene31895:CDS 40.0%
GGAACAAATGGAACGTCTAA+TGG + chr1.1:19794391-19794410 MS.gene31895:CDS 40.0%
GGTTACATTTGGGGAACAAA+TGG + chr1.1:19794379-19794398 MS.gene31895:CDS 40.0%
GTCATTAGTAAATCTGCTGG+AGG + chr1.1:19794322-19794341 MS.gene31895:CDS 40.0%
GTCATTTCATGTCTCAGAGA+TGG + chr1.1:19794174-19794193 MS.gene31895:intron 40.0%
GTCTGCGTGCAAAATGAATT+GGG + chr1.1:19795277-19795296 MS.gene31895:CDS 40.0%
GTGAAACTAGGACTCTCATT+GGG - chr1.1:19796034-19796053 None:intergenic 40.0%
GTTACGGTTATGTCGGATTT+CGG - chr1.1:19798312-19798331 None:intergenic 40.0%
GTTGTGGGTAGTGTAAATTG+TGG + chr1.1:19799021-19799040 MS.gene31895:intron 40.0%
TAATGAAAACAGAGGAGGCA+GGG + chr1.1:19797205-19797224 MS.gene31895:CDS 40.0%
TACATAAATAGAGTGGGTCC+AGG - chr1.1:19797056-19797075 None:intergenic 40.0%
TCAACAGATAAGACCTCTCT+AGG - chr1.1:19794082-19794101 None:intergenic 40.0%
TCAACTATATCAGCATGCCA+TGG - chr1.1:19794496-19794515 None:intergenic 40.0%
TCACTTGAGTAGTTGCTTCT+TGG + chr1.1:19794243-19794262 MS.gene31895:CDS 40.0%
TCGAACTAAGCAAGCATACT+TGG - chr1.1:19795150-19795169 None:intergenic 40.0%
TGCAATGCAGTGATGGTATT+TGG + chr1.1:19795300-19795319 MS.gene31895:CDS 40.0%
TGCTATCATCTCAACCACAA+AGG + chr1.1:19797967-19797986 MS.gene31895:intron 40.0%
TGGAAAGAGTTCAGAGCAAT+GGG + chr1.1:19794602-19794621 MS.gene31895:CDS 40.0%
TGTATGTGTGCCATCAAACA+GGG + chr1.1:19798556-19798575 MS.gene31895:intron 40.0%
TGTTCCCCAAATGTAACCAT+GGG - chr1.1:19794377-19794396 None:intergenic 40.0%
TTATCGCCATGTCATGTTGA+AGG + chr1.1:19796061-19796080 MS.gene31895:CDS 40.0%
TTATTCAAGCACGGAGTATG+TGG + chr1.1:19794718-19794737 MS.gene31895:intron 40.0%
TTGACCCCAACAATCTCATT+GGG - chr1.1:19794646-19794665 None:intergenic 40.0%
TTGTGAATGTTACTCCCTTG+AGG - chr1.1:19795623-19795642 None:intergenic 40.0%
TTGTTCCCCAAATGTAACCA+TGG - chr1.1:19794378-19794397 None:intergenic 40.0%
TTTCAACAACAACACGGCAA+CGG + chr1.1:19793287-19793306 MS.gene31895:CDS 40.0%
TTTGTACCTAACTGTGTGAG+AGG + chr1.1:19796135-19796154 MS.gene31895:intron 40.0%
! ATGGAATATGCGGGCAATTT+TGG + chr1.1:19799517-19799536 MS.gene31895:CDS 40.0%
! ATGGTTGGTTCACTAAAGGT+TGG + chr1.1:19799916-19799935 MS.gene31895:CDS 40.0%
! CAGTTTCACATGGTTTGGAA+CGG + chr1.1:19798387-19798406 MS.gene31895:intron 40.0%
! CATCAAAACAGTGAGTGTTG+GGG - chr1.1:19793493-19793512 None:intergenic 40.0%
! CTCATGATGAAGGATAATGG+TGG + chr1.1:19798998-19799017 MS.gene31895:intron 40.0%
! CTGTGATTGTTTCTTCTCTC+TGG - chr1.1:19798721-19798740 None:intergenic 40.0%
! GACTATGGTTGGTTCACTAA+AGG + chr1.1:19799912-19799931 MS.gene31895:CDS 40.0%
! GATAGGGAGTGTATTGAACT+TGG + chr1.1:19795042-19795061 MS.gene31895:intron 40.0%
! GCATCCCTAAAAAGCATGTA+AGG - chr1.1:19794780-19794799 None:intergenic 40.0%
! GTATCATCTGTTTCAGGTCA+TGG - chr1.1:19797719-19797738 None:intergenic 40.0%
! GTGTTGTCTCTGATTTTTCG+TGG - chr1.1:19799486-19799505 None:intergenic 40.0%
! GTTTGATGGCACACATACAT+TGG - chr1.1:19798555-19798574 None:intergenic 40.0%
! TTGTTTCTTCTCTCTGGTAG+TGG - chr1.1:19798715-19798734 None:intergenic 40.0%
! TTTTACACAGCAGTCTCTGT+TGG - chr1.1:19794885-19794904 None:intergenic 40.0%
!! AATTAGAAGTGTTGGTGAGG+AGG + chr1.1:19796545-19796564 MS.gene31895:CDS 40.0%
!! ATTTTGACAAGATAACGGCG+AGG + chr1.1:19793721-19793740 MS.gene31895:intron 40.0%
!! GTGGTTGGAAGTCATTTTCA+CGG + chr1.1:19797873-19797892 MS.gene31895:intron 40.0%
!! TGGTTGGAAGTCATTTTCAC+GGG + chr1.1:19797874-19797893 MS.gene31895:intron 40.0%
!!! CAGGAGCAGTTTTGTTATGA+GGG + chr1.1:19796602-19796621 MS.gene31895:CDS 40.0%
AAACTGACGTTGAAACGGTC+GGG + chr1.1:19798874-19798893 MS.gene31895:intron 45.0%
AAAGAGATCAGGCACCCAAA+GGG - chr1.1:19794581-19794600 None:intergenic 45.0%
AATCTCATTGGGGCAGAACA+AGG - chr1.1:19794635-19794654 None:intergenic 45.0%
AATTCCGTGGAGTTGAGAGT+AGG + chr1.1:19799846-19799865 MS.gene31895:CDS 45.0%
AATTGGGTGCAATGCAGTGA+TGG + chr1.1:19795293-19795312 MS.gene31895:CDS 45.0%
ACGTGCCCATGGTTACATTT+GGG + chr1.1:19794369-19794388 MS.gene31895:CDS 45.0%
AGCAGCCAAGGATGCATAAT+CGG - chr1.1:19793883-19793902 None:intergenic 45.0%
AGTAAATCTGCTGGAGGGAT+TGG + chr1.1:19794328-19794347 MS.gene31895:CDS 45.0%
AGTGAAGCTAGGGTTCTCAT+TGG - chr1.1:19797288-19797307 None:intergenic 45.0%
AGTGAGCTGTTGAAGAAGCA+TGG + chr1.1:19799810-19799829 MS.gene31895:CDS 45.0%
ATCTCAACCACAAAGGAACC+GGG + chr1.1:19797974-19797993 MS.gene31895:intron 45.0%
ATGAAAGCCTCTCACACAGT+TGG - chr1.1:19796145-19796164 None:intergenic 45.0%
ATTATGCATCCTTGGCTGCT+AGG + chr1.1:19793883-19793902 MS.gene31895:CDS 45.0%
ATTCCGTGGAGTTGAGAGTA+GGG + chr1.1:19799847-19799866 MS.gene31895:CDS 45.0%
ATTCGTGCACGAAATGTGCA+AGG - chr1.1:19796425-19796444 None:intergenic 45.0%
CAAGACGACTTTGTAAACGC+CGG - chr1.1:19793815-19793834 None:intergenic 45.0%
CACATGTCCACAAACTTCTC+AGG - chr1.1:19799447-19799466 None:intergenic 45.0%
CAGGGATCTACTGAAGAAGT+TGG - chr1.1:19799428-19799447 None:intergenic 45.0%
CATCTCAACCACAAAGGAAC+CGG + chr1.1:19797973-19797992 MS.gene31895:intron 45.0%
CGAAAGCGGTTCTGTCAAAA+TGG + chr1.1:19798411-19798430 MS.gene31895:intron 45.0%
CGAGTTGTTTGTGTTGAAGC+TGG - chr1.1:19793379-19793398 None:intergenic 45.0%
CTAATGAAAACAGAGGAGGC+AGG + chr1.1:19797204-19797223 MS.gene31895:CDS 45.0%
CTTGACCCCAACAATCTCAT+TGG - chr1.1:19794647-19794666 None:intergenic 45.0%
GAAACTGACGTTGAAACGGT+CGG + chr1.1:19798873-19798892 MS.gene31895:intron 45.0%
GACCGTTTCAACGTCAGTTT+CGG - chr1.1:19798874-19798893 None:intergenic 45.0%
GGGATCTACTGAAGAAGTTG+GGG - chr1.1:19799426-19799445 None:intergenic 45.0%
GGTCTGCGTGCAAAATGAAT+TGG + chr1.1:19795276-19795295 MS.gene31895:CDS 45.0%
GTAGATCCCTGAGAAGTTTG+TGG + chr1.1:19799437-19799456 MS.gene31895:intron 45.0%
GTGAAGCTAGGGTTCTCATT+GGG - chr1.1:19797287-19797306 None:intergenic 45.0%
TAAAGAGATCAGGCACCCAA+AGG - chr1.1:19794582-19794601 None:intergenic 45.0%
TAATGGAAACACAGGAGGCA+TGG + chr1.1:19795952-19795971 MS.gene31895:CDS 45.0%
TAATTGTGCCCAGATTCTGC+TGG - chr1.1:19794821-19794840 None:intergenic 45.0%
TACGTGCCCATGGTTACATT+TGG + chr1.1:19794368-19794387 MS.gene31895:CDS 45.0%
TCAAGACACACCCTGTTTGA+TGG - chr1.1:19798569-19798588 None:intergenic 45.0%
TCTGCCCCAATGAGATTGTT+GGG + chr1.1:19794638-19794657 MS.gene31895:CDS 45.0%
TGAAAGCCTCTCACACAGTT+AGG - chr1.1:19796144-19796163 None:intergenic 45.0%
TGAAAGCCTCTCACACAGTT+GGG - chr1.1:19796144-19796163 None:intergenic 45.0%
TGACCCCAACAATCTCATTG+GGG - chr1.1:19794645-19794664 None:intergenic 45.0%
TGATTGAACACACGCAGCAT+TGG - chr1.1:19794424-19794443 None:intergenic 45.0%
TGCTTCTTCAACAGCTCACT+TGG - chr1.1:19799810-19799829 None:intergenic 45.0%
TGGACATGTGCAGAAAACCA+AGG + chr1.1:19799457-19799476 MS.gene31895:intron 45.0%
TTCTCCTACACTTTCAACGC+TGG + chr1.1:19794208-19794227 MS.gene31895:CDS 45.0%
TTCTGCCCCAATGAGATTGT+TGG + chr1.1:19794637-19794656 MS.gene31895:CDS 45.0%
TTCTTCGGTGAGCAGTTGTT+GGG + chr1.1:19798926-19798945 MS.gene31895:intron 45.0%
TTGAAGCTGGCGTTGTTGAA+CGG - chr1.1:19793366-19793385 None:intergenic 45.0%
TTGGGTGCCTGATCTCTTTA+TGG + chr1.1:19794582-19794601 MS.gene31895:CDS 45.0%
TTGGTGAGGAGGATAGAACA+TGG + chr1.1:19797802-19797821 MS.gene31895:intron 45.0%
! AATGGAAACACAGGAGGCAT+GGG + chr1.1:19795953-19795972 MS.gene31895:CDS 45.0%
! ATTTTGCACGCAGACCCATT+TGG - chr1.1:19795272-19795291 None:intergenic 45.0%
! CGGGAACATAACTTGCAAGT+CGG + chr1.1:19797893-19797912 MS.gene31895:intron 45.0%
! CTGATTTTTCGTGGACTCCT+TGG - chr1.1:19799477-19799496 None:intergenic 45.0%
! CTTCTTGGTGTGCATGAAAG+AGG + chr1.1:19794258-19794277 MS.gene31895:CDS 45.0%
! GGAAGGAACATGGTTTGTAG+AGG + chr1.1:19799869-19799888 MS.gene31895:CDS 45.0%
! GTATCGTCTGTTTCAGGTCA+TGG - chr1.1:19796473-19796492 None:intergenic 45.0%
! GTTTTCGAATGGGAAGTGGT+TGG + chr1.1:19797858-19797877 MS.gene31895:intron 45.0%
! TGACGGGTCTAACGGAATAA+CGG - chr1.1:19798847-19798866 None:intergenic 45.0%
! TGTTCCAGCGTTGAAAGTGT+AGG - chr1.1:19794215-19794234 None:intergenic 45.0%
!! GAAGGATAATGGTGGGTTGT+GGG + chr1.1:19799006-19799025 MS.gene31895:intron 45.0%
!! GTTTTGTTATGAGGGCTGGT+TGG + chr1.1:19796610-19796629 MS.gene31895:CDS 45.0%
!! TAGAAGTGTTGGTGAGGACA+GGG + chr1.1:19796548-19796567 MS.gene31895:CDS 45.0%
!! TATGCGGGCAATTTTGGAGA+TGG + chr1.1:19799523-19799542 MS.gene31895:CDS 45.0%
!! TGAAGGATAATGGTGGGTTG+TGG + chr1.1:19799005-19799024 MS.gene31895:intron 45.0%
!! TTAGAAGTGTTGGTGAGGAC+AGG + chr1.1:19796547-19796566 MS.gene31895:CDS 45.0%
!! TTCTTCTCTCTGGTAGTGGT+GGG - chr1.1:19798711-19798730 None:intergenic 45.0%
!! TTTCTTCTCTCTGGTAGTGG+TGG - chr1.1:19798712-19798731 None:intergenic 45.0%
!!! AGCAGTTTTGTTATGAGGGC+TGG + chr1.1:19796606-19796625 MS.gene31895:CDS 45.0%
!!! GCAGGAGCAGTTTTGTTATG+AGG + chr1.1:19796601-19796620 MS.gene31895:CDS 45.0%
AACAGCAATCCTAGCAGCCA+AGG - chr1.1:19793895-19793914 None:intergenic 50.0%
ACTACTGCTGCTACACCTCA+AGG + chr1.1:19795605-19795624 MS.gene31895:CDS 50.0%
CAACTACTCAAGTGAGGCCT+AGG - chr1.1:19794238-19794257 None:intergenic 50.0%
CAGCCAAGGATGCATAATCG+GGG - chr1.1:19793881-19793900 None:intergenic 50.0%
CATCAAGAATGCGGCTCGAT+TGG + chr1.1:19794001-19794020 MS.gene31895:CDS 50.0%
CGCCGAAACTGACGTTGAAA+CGG + chr1.1:19798869-19798888 MS.gene31895:intron 50.0%
CGGTTATGTCGGATTTCGGT+CGG - chr1.1:19798308-19798327 None:intergenic 50.0%
CGTGCCCATGGTTACATTTG+GGG + chr1.1:19794370-19794389 MS.gene31895:CDS 50.0%
CGTTTCAACGTCAGTTTCGG+CGG - chr1.1:19798871-19798890 None:intergenic 50.0%
CTACTGCTGCTACACCTCAA+GGG + chr1.1:19795606-19795625 MS.gene31895:CDS 50.0%
CTGCCCCAATGAGATTGTTG+GGG + chr1.1:19794639-19794658 MS.gene31895:CDS 50.0%
CTTTCAACGCTGGAACACCT+AGG + chr1.1:19794218-19794237 MS.gene31895:CDS 50.0%
GACGGGTCTAACGGAATAAC+GGG - chr1.1:19798846-19798865 None:intergenic 50.0%
GAGGCTAATGGAAACACAGG+AGG + chr1.1:19795947-19795966 MS.gene31895:intron 50.0%
GCAACGGCGGCATTTACAAT+GGG + chr1.1:19793303-19793322 MS.gene31895:CDS 50.0%
GCAGAGGCTAATGGAAACAC+AGG + chr1.1:19795944-19795963 MS.gene31895:intron 50.0%
GCAGCCAAGGATGCATAATC+GGG - chr1.1:19793882-19793901 None:intergenic 50.0%
GTCGCTCAGAAAGTTTGTGC+CGG + chr1.1:19793793-19793812 MS.gene31895:intron 50.0%
GTGTGTAGAGTGTGTGTTCG+TGG + chr1.1:19799116-19799135 MS.gene31895:intron 50.0%
GTTCACAACATACGTGCCCA+TGG + chr1.1:19794358-19794377 MS.gene31895:CDS 50.0%
GTTCTTCGGTGAGCAGTTGT+TGG + chr1.1:19798925-19798944 MS.gene31895:intron 50.0%
TGAGAGTAGGGGAAGGAACA+TGG + chr1.1:19799859-19799878 MS.gene31895:CDS 50.0%
TGCATAATCGGGGTGGTTAG+CGG - chr1.1:19793871-19793890 None:intergenic 50.0%
TTCCCCTACTCTCAACTCCA+CGG - chr1.1:19799853-19799872 None:intergenic 50.0%
TTCCGTGGAGTTGAGAGTAG+GGG + chr1.1:19799848-19799867 MS.gene31895:CDS 50.0%
TTTGTGCCCAACTGTGTGAG+AGG + chr1.1:19797388-19797407 MS.gene31895:intron 50.0%
! TGGTTTGGAACGGACGAAAG+CGG + chr1.1:19798397-19798416 MS.gene31895:intron 50.0%
!! AGGTGCTTTTGCTGTGTACC+TGG + chr1.1:19794468-19794487 MS.gene31895:CDS 50.0%
!! GGTCTAACGGAATAACGGGT+GGG - chr1.1:19798842-19798861 None:intergenic 50.0%
ACGTCAGTTTCGGCGGTTGA+CGG - chr1.1:19798864-19798883 None:intergenic 55.0%
CAACAACAACACGGCAACGG+CGG + chr1.1:19793290-19793309 MS.gene31895:CDS 55.0%
CCAAGGATGCATAATCGGGG+TGG - chr1.1:19793878-19793897 None:intergenic 55.0%
CCACCCCGATTATGCATCCT+TGG + chr1.1:19793875-19793894 MS.gene31895:CDS 55.0%
CCATGCCCTGAGCAGTTTCA+AGG + chr1.1:19796744-19796763 MS.gene31895:CDS 55.0%
CCTTGAAACTGCTCAGGGCA+TGG - chr1.1:19796747-19796766 None:intergenic 55.0%
GACGTTGAAACGGTCGGGAA+TGG + chr1.1:19798879-19798898 MS.gene31895:intron 55.0%
GCGGCATTTACAATGGGCGT+GGG + chr1.1:19793309-19793328 MS.gene31895:CDS 55.0%
GGCAACGGCGGCATTTACAA+TGG + chr1.1:19793302-19793321 MS.gene31895:CDS 55.0%
GGCATGGTTCCTTCGTGGTT+GGG - chr1.1:19796731-19796750 None:intergenic 55.0%
GGTCGGATGTGTACGAGCTT+CGG + chr1.1:19798347-19798366 MS.gene31895:intron 55.0%
GTGGAGTTGAGAGTAGGGGA+AGG + chr1.1:19799852-19799871 MS.gene31895:CDS 55.0%
GTGGTTAGCGGTCATACAGG+CGG - chr1.1:19793859-19793878 None:intergenic 55.0%
TACAACCGAGCCAAACCACC+CGG + chr1.1:19798816-19798835 MS.gene31895:intron 55.0%
TATCAGCATGCCATGGCTCC+AGG - chr1.1:19794489-19794508 None:intergenic 55.0%
TGACAGTAAGGGGTGAGCAC+CGG - chr1.1:19798972-19798991 None:intergenic 55.0%
TTGCTGTGTACCTGGAGCCA+TGG + chr1.1:19794476-19794495 MS.gene31895:CDS 55.0%
TTTGCATGGTCGCTCCGATG+TGG + chr1.1:19795341-19795360 MS.gene31895:CDS 55.0%
! GGGTCTAACGGAATAACGGG+TGG - chr1.1:19798843-19798862 None:intergenic 55.0%
!! AGCTTGGGGGACTAGCTGAA+GGG - chr1.1:19798215-19798234 None:intergenic 55.0%
!! TAACGGAATAACGGGTGGGC+CGG - chr1.1:19798838-19798857 None:intergenic 55.0%
AACCACAAAGGAACCGGGCC+CGG + chr1.1:19797979-19797998 MS.gene31895:intron 60.0%
CAAATCCGCCCGTAACCGAC+CGG + chr1.1:19798950-19798969 MS.gene31895:intron 60.0%
CATACAGGCGGCGGTTTCAG+CGG - chr1.1:19793847-19793866 None:intergenic 60.0%
CCTTGAAACTTCTCCGGGCC+CGG - chr1.1:19797995-19798014 None:intergenic 60.0%
CGTCAGTTTCGGCGGTTGAC+GGG - chr1.1:19798863-19798882 None:intergenic 60.0%
CTCAGGGCATGGTTCCTTCG+TGG - chr1.1:19796736-19796755 None:intergenic 60.0%
GGCGGCATTTACAATGGGCG+TGG + chr1.1:19793308-19793327 MS.gene31895:CDS 60.0%
GGGCATGGTTCCTTCGTGGT+TGG - chr1.1:19796732-19796751 None:intergenic 60.0%
GGGGTGGTTAGCGGTCATAC+AGG - chr1.1:19793862-19793881 None:intergenic 60.0%
GTTAGCGGTCATACAGGCGG+CGG - chr1.1:19793856-19793875 None:intergenic 60.0%
! GTGTTGGTGAGGACAGGGCA+TGG + chr1.1:19796553-19796572 MS.gene31895:CDS 60.0%
! TCGGCGGTTGACGGGTCTAA+CGG - chr1.1:19798855-19798874 None:intergenic 60.0%
!! AACGGAATAACGGGTGGGCC+GGG - chr1.1:19798837-19798856 None:intergenic 60.0%
!! AGTAAGGGGTGAGCACCGGT+CGG - chr1.1:19798968-19798987 None:intergenic 60.0%
!! GAGCTTGGGGGACTAGCTGA+AGG - chr1.1:19798216-19798235 None:intergenic 60.0%
CCGGGCCCGGAGAAGTTTCA+AGG + chr1.1:19797992-19798011 MS.gene31895:intron 65.0%
GGGCGTGGGAGTGAAGCTCA+AGG + chr1.1:19793323-19793342 MS.gene31895:CDS 65.0%
TCTCACACTTCACGCGCGCG+TGG - chr1.1:19798493-19798512 None:intergenic 65.0%
! CGGTCGGTTACGGGCGGATT+TGG - chr1.1:19798952-19798971 None:intergenic 65.0%
!! GGGTGAGCACCGGTCGGTTA+CGG - chr1.1:19798962-19798981 None:intergenic 65.0%
!! GGTGAGCACCGGTCGGTTAC+GGG - chr1.1:19798961-19798980 None:intergenic 65.0%
AACGGGTGGGCCGGGTGGTT+TGG - chr1.1:19798829-19798848 None:intergenic 70.0%
CTCCGGGCCCGGTTCCTTTG+TGG - chr1.1:19797984-19798003 None:intergenic 70.0%
! GTGGGCCGGGTGGTTTGGCT+CGG - chr1.1:19798824-19798843 None:intergenic 70.0%
!! GAGCACCGGTCGGTTACGGG+CGG - chr1.1:19798958-19798977 None:intergenic 70.0%
!! GGAATAACGGGTGGGCCGGG+TGG - chr1.1:19798834-19798853 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 19793281 19800037 19793281 ID=MS.gene31895
chr1.1 mRNA 19793281 19800037 19793281 ID=MS.gene31895.t1;Parent=MS.gene31895
chr1.1 exon 19793281 19793397 19793281 ID=MS.gene31895.t1.exon1;Parent=MS.gene31895.t1
chr1.1 CDS 19793281 19793397 19793281 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19793633 19793688 19793633 ID=MS.gene31895.t1.exon2;Parent=MS.gene31895.t1
chr1.1 CDS 19793633 19793688 19793633 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19793794 19794026 19793794 ID=MS.gene31895.t1.exon3;Parent=MS.gene31895.t1
chr1.1 CDS 19793794 19794026 19793794 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19794191 19794732 19794191 ID=MS.gene31895.t1.exon4;Parent=MS.gene31895.t1
chr1.1 CDS 19794191 19794732 19794191 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19795203 19795683 19795203 ID=MS.gene31895.t1.exon5;Parent=MS.gene31895.t1
chr1.1 CDS 19795203 19795683 19795203 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19795948 19796096 19795948 ID=MS.gene31895.t1.exon6;Parent=MS.gene31895.t1
chr1.1 CDS 19795948 19796096 19795948 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19796486 19796765 19796486 ID=MS.gene31895.t1.exon7;Parent=MS.gene31895.t1
chr1.1 CDS 19796486 19796765 19796486 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19797201 19797335 19797201 ID=MS.gene31895.t1.exon8;Parent=MS.gene31895.t1
chr1.1 CDS 19797201 19797335 19797201 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19799470 19799583 19799470 ID=MS.gene31895.t1.exon9;Parent=MS.gene31895.t1
chr1.1 CDS 19799470 19799583 19799470 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19799675 19799733 19799675 ID=MS.gene31895.t1.exon10;Parent=MS.gene31895.t1
chr1.1 CDS 19799675 19799733 19799675 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
chr1.1 exon 19799795 19800037 19799795 ID=MS.gene31895.t1.exon11;Parent=MS.gene31895.t1
chr1.1 CDS 19799795 19800037 19799795 ID=cds.MS.gene31895.t1;Parent=MS.gene31895.t1
Gene Sequence

>MS.gene31895

ATGTCGTTTCAACAACAACACGGCAACGGCGGCATTTACAATGGGCGTGGGAGTGAAGCTCAAGGAATGCATTTCTATTTAACCGTTCAACAACGCCAGCTTCAACACAAACAACTCGTAAGAAAACAACACACACTTTTGGAATTATCATAAATGTGATTTATTTGATATATAGATTAGAGTTTGTAGTCAATGTGTTCGATCAAAAGCCCCAACACTCACTGTTTTGATGAAATGATGGTTTCTGCTGCAAAATTAAATATCCAATTAGATATCATTATTCTTGATTTTCAGAACTAATTTCAGACAAGAACCTGAAATTAAATTCATACATACATACTTGCTTTATCAGATGATTTGTGTGTATCTTCAACAAAATGCAAAATTGTTCCCTTCACAAGCAAACATGTAATGTAATCATCCTTATCAAGAGGCGGTTCATTTTGACAAGATAACGGCGAGGTTGAAGAAACTGAGTTATGGTTTAAGCAGAACACTGTGACCCTGTTTTAGTCGCTCAGAAAGTTTGTGCCGGCGTTTACAAAGTCGTCTTGATGAATTAGCCGCTGAAACCGCCGCCTGTATGACCGCTAACCACCCCGATTATGCATCCTTGGCTGCTAGGATTGCTGTTTCAAATCTGCACAAGAACACACTGAAATCTTTTTCTGAAACTGTTAAGGCTCCGTTGTTGATTGCTGATGATGTGTATGAAATTATCATCAAGAATGCGGCTCGATTGGATAGTGAGATAATATATGATAGGGGTTTTCACTACGATTACTTTGTATTCAAAACCCTAGAGAGGTCTTATCTGTTGAAAGTTGAAGGAGTGATAAAGAGGGTTTCTGTTGAAATTCACAAGGATGATGTTGAATCTGCTGTCAAAACTTGTCATTTCATGTCTCAGAGATGGTTCACTCATGCTTCTCCTACACTTTCAACGCTGGAACACCTAGGCCTCACTTGAGTAGTTGCTTCTTGGTGTGCATGAAAGAGGATAGTATTGAGGGGATTTATGATACATTGAAGGAGTGTGCTGTCATTAGTAAATCTGCTGGAGGGATTGGTGTTTCTGTTCACAACATACGTGCCCATGGTTACATTTGGGGAACAAATGGAACGTCTAATGGTATTGTTCCAATGCTGCGTGTGTTCAATCATACTGCATGTTATGTTGATCAGAAAGGTGCTTTTGCTGTGTACCTGGAGCCATGGCATGCTGATATAGTTGACTTCTTGGAGTTAAAAATAAATCATGGAAAGGAAGAGCAGCGTGCTCGAGATTTATTTTACGCCCTTTGGGTGCCTGATCTCTTTATGGAAAGAGTTCAGAGCAATGGGAAATTGTCCTTGTTCTGCCCCAATGAGATTGTTGGGGTCAAGAATATGATAAGCTGTACACTCAGTATGAAAAAGCAGGAAAAGCAAAAAAGATTATTCAAGCACGGAGTATGTGGTTTGCAATTTTGAAGTCACAGATAGAAACTTGAAATCCTTACATGCTTTTTAGGGATGCTTGCAATAGGAAAATCAACCAGCAGAATCTGGGCACAATTAAGTCATCAAATCTGTGCACTGGGATAATCGAGTATACAAGTCCAACAGAGACTGCTGTGTAAAACCTTTGAACCAATAACTAGAAAGTTTCAATTAGTTCAAATTTCACAAATTCTGCTTTTATATATATTTTCTCTGTTAGCTTTGGTTCTCTCTATGTGTATTGTTTGCTCAGGTATTACTGGTACACTTAAAAATGTGGATAGGGAGTGTATTGAACTTGGTTTTCATTATTGAATAAAGTTTTCTTGTTAAAAATAAAAGACCCATTTTTCCACCTAAAAGTCTGATACTAAAAACTAACAACCAAGTATGCTTGCTTAGTTCGATCTAAGTTCAAACTTTTGAAAATGTTCTTGCAGATGATTCCGAGAAATTTTGTAGAGAGGTATTGGAAAAATGTACCAAATCCAATATCCCTTAAACTTCCAAATGGGTCTGCGTGCAAAATGAATTGGGTGCAATGCAGTGATGGTATTTGGCTTCAAAATTGGAAGAGGTTTGCATGGTCGCTCCGATGTGGAGATCTTTTAGTTTTCCAATACAAAGGAGGGTCAGATTTTAATGTCATTATATTAGATGATAGTAAATTAGAAATTGACTATTCAAGTATGAGATGCAACGGCGATCAAGAAAATACTAAAGAGAGTCATGATGATGCTGACGACGACGACAATGATTATGAGTGTGTTGAGATTCCTAGTGACACTGAAAATACTAAAATTCCCCTCAAGAAAAAGAGAATCAATTCAAATGGCATTGCTACTACTGCTGCTACACCTCAAGGGAGTAACATTCACAAGAGAAAAACTAATATCAATGCAACCCAACAAAAAGTTTCAGGTAAGTTATTCTACTTCCTTTTATTCATTCATCTGTTTATGGGCAAAATGTTTTTAATTAGTCCCTTAGTTCATCTCAAATTTTGGTTTTAGTCTTTCTTTCCACTTTTTAATCCATACAAATTACAAAAGTATACGTTTTTAGTTCTATACCCACTTTATTTAAGATGAAATCAATTTTCAAGACTGTCATACAAAAAAATCAAGACGCAAACTTTTATTTTGTACCTTTCAAATGCTGAAAATAGTTTTTAAAGTTTTGCAGAGGCTAATGGAAACACAGGAGGCATGGGTAAGAAAGCTAAAAATGCACAAAAACTAAATGAGAGAAGTTGCACAAATTCTCATCCCAATGAGAGTCCTAGTTTCACTGTCAAATTATCGCCATGTCATGTTGAAGGTGATAATAGATTGGTATGTTTCCTATACTACTTTTTCTGTAATAGTGACATTTTGTACCTAACTGTGTGAGAGGCTTTCATTTTTCTATAAGAACTGAATGTATTGAAATTACAAACGAAATCCCCAAATGTTTCTCTTGTTAATAGTTTTATCAAATAAATTTACTAATTGAAAACATATTCAAGGATTAATGTAAATTTGTTCATTAAATTATTAACAAAAGAAAAATGTATAGCAAACATACTAAAGACAGATTTGAAGATCAAAATAACTAGCAGAAGAGACATTTAGGCATATTTTTATAATTTTTGATACATTTAAGTACTGTTTGAATGAGCCTTGCACATTTCGTGCACGAATATATTTTAATCAATATTTGTTTAAACCATGACCTGAAACAGACGATACCTAATTGCTTTTCGAAAGAATACATGAATGAGTTATTGCAAGGGAAGGCAACAATTAGAAGTGTTGGTGAGGACAGGGCATGGCACGTGACATTAAACTTTCGTAAAAGCAGGAGCAGTTTTGTTATGAGGGCTGGTTGGAAGTCATTTTCAAAGGAACATGAGTTGAAAGTTGGTGATGTATGTAAATTTGAGATGACTCAACGCGAACCACTTTCATTCACAATTATTATTATCCCAACCACGAAGGAACCATGCCCTGAGCAGTTTCAAGGTATTATATTAGATGATAGTAAATTAGAAATTGACTATTCAAGTATGATATGCAATAGCGTTAAAGAAAATACTAAAGAGTGTGATGATGATTATGATGATGAGATTCCCAGTGACGATGAAAATAATAAAAACCCCATCAAGAAAAAGAAAATCAATTCAAATGACATTGCTACTACTGCTGCTATCAATGCAACCCCACAAAATCAATGTGTTTATTTCAAATTTTGTTTTCAGTCATTCTATTTCTACCCACTTTTTAATCCATACAAAAGCACATGTTTTAATCCTGGACCCACTCTATTTATGTATATTTTTTATTTTGTTCTCTTTTAAGATTTAAATAATTTTCAAGACTGTCATACAAATGAAATCAAGACATGAACTTTTATTTTGTATCCTTCAAGTGCTGAAAATAATTTTTGAAGTTTTGCAGAGACTAATGAAAACAGAGGAGGCAGGGATAAGAAATGCACAAAAACTAAAGATGGGAATGAGAGAAACTGCACGAATTCTCATCCCAATGAGAACCCTAGCTTCACTCTCATATTATTGCCATATCATGTTGAAGGTGATAATAGATTGGTATGTTTCCTATACTTTTTTTCTCATTAATAGTGATTTTTGTGCCCAACTGTGTGAGAGGCTTTCATTTTACTATACGAACTGATTGTATTGGAAATTACAAACAAATCTCCAAATGTCTCATTTGATAATAGTTGTATTGAATAAACTTACTAACAAAAACATATTCAAGGACTAAAGTAAATTTATTCAATAAACTTATTAACAAAAGAGAAAAAGTATAGGAAACATACTAAAGACACATTTGAAGATCAAAATAACTAGCAGAAGAGACATTTAGGTATATTTTTATAAATTTGATACATTTAAGCAGTGGTTTGAAAGAGCCTTGCACAGTACATATAGTTAATGAATATATATTTTAAACCATGACCTGAAACAGATGATACCTAAATGGTTTTCAAAAGAATACATGAATGAGTTATTGCAAGGGAAGGCAACAATTAGAAGTGTTGGTGAGGAGGATAGAACATGGCACGTGCGTTAAACTTTGATGAATCCAGAATAAGTTTTCGAATGGGAAGTGGTTGGAAGTCATTTTCACGGGAACATAACTTGCAAGTCGGTGACATGTGTACGTTTGAGATGACTCAACGCAAACCACTTTCATTCACGATTGCTATCATCTCAACCACAAAGGAACCGGGCCCGGAGAAGTTTCAAGGTATTGCTTTTATTATTGTTGTTTTTGAAATGATACATATTTTATTATCTTCTGATTTTGATTTTGATACATTTGATCAATGTTAAAAGTTTTAATTTGCCAACAAACTACAATCAATCAAATGTGTAAAATATTTTAAGGTTTAAATCTTGGACATCATGTTGTGTAGTAGAACGAATATTTCACTTGATTGTACAACCCTTCAGCTAGTCCCCCAAGCTCTATTTTATTGCGTTGGTTAAATACACATGTTAATGTTACTGTCATTAGGGCTGAGCAAGAATTTGTCATCCGACCGAAATCCGACATAACCGTAACAAATACTTGTTCAACGGTCGGATGTGTACGAGCTTCGGAATGAAGTGAGACAAATCAGTTTCACATGGTTTGGAACGGACGAAAGCGGTTCTGTCAAAATGGAATGAGCGGTGTCTGAACCCGTCCACTTATTACTGTTGTTTGTGTCTCTGTAGAAGCCACGCGCGCGTGAAGTGTGAGACTATCTCAAGTCTTGAAAATTGAACACCCTACACACTGTCCAATGTATGTGTGCCATCAAACAGGGTGTGTCTTGACTTTTCAATTGTCATGTTTACCTTTTTTGGCTTTTCATATCTCATGTACTCCATTAAAATAAACTTCTTTCTCTTACCTTAATTAATTTATTACAAGCAAGCAAGAATATGATATTGAGCCCACCACTACCAGAGAGAAGAAACAATCACAGGGAATGAACACGAAGCACATGAGATGAGAGATATACAGAGAGGAGAAGAACATTTTTGCAGATGAAAGCTAGAGATACAACCGAGCCAAACCACCCGGCCCACCCGTTATTCCGTTAGACCCGTCAACCGCCGAAACTGACGTTGAAACGGTCGGGAATGGTTCACATTTTCTGATCTACAGATGTTCTTCGGTGAGCAGTTGTTGGGCCAAATCCGCCCGTAACCGACCGGTGCTCACCCCTTACTGTCATAAAATCTCATGATGAAGGATAATGGTGGGTTGTGGGTAGTGTAAATTGTGGTGACCAATAACTGTAAAATAAAATAGAAAAAATGACTGATGTGTACCGATAGATGATAGTGTGTTTAAGGGAGTGTGTAGAGTGTGTGTTCGTGGCATTTCTATAGAGTATTTGATTTTAGTCATTCTAATAATGGCTACATGAAAACTAAGATAAATACTGTACACATATATATTTACATGATTAATTCTAAAATATACAAATTTTTCAAGGATTAATAGAAAACTATGATCGAAAGTGATATATTTACCAAGATTAATTTTTATACACGGATTAGAAGCTAAAAGTGATATATCTGCTAGGACAAAAAAACATATTTAAACTAAGTTGTAATGATCTTATGATTATAATTGATTTGCATGTAGCATTAGTAGATTTTCCCCAACTTCTTCAGTAGATCCCTGAGAAGTTTGTGGACATGTGCAGAAAACCAAGGAGTCCACGAAAAATCAGAGACAACACCCGTAAAAGATATGGAATATGCGGGCAATTTTGGAGATGGAATTTCAAGGAGCTGTACAAAAACACATGGTTTTAGGGGTATTCATCTTAATTTTGTTTTCGTGTTTTTTTGTGTACAATTCATGCAAATCTCCTTAAACTATGTTTTCTTTGTTGTTAATTACTGCAGATTCTGTAAGTCTGAATTTACATGAGATGTTCAAGGTTCTTATAACATCATCAGACAAGGTATGAATTACGTAAAATGCTGTTACCACGTATAAAATTTAATTTGTTCATATATATGCAGTTGGTTGTACTACCAAGTGAGCTGTTGAAGAAGCATGGTATATTTAGTGGAAATTCCGTGGAGTTGAGAGTAGGGGAAGGAACATGGTTTGTAGAGGTGAATTATAATGAACATCTCGACTATGGTTGGTTCACTAAAGGTTGGCAAGAATTTGTGAGAGATTGCAAAGTAAAGGCTGGAGACACTTGCTTGTTTGAGACGATTGATGTGCAAAATCATGTGTTCAAGGTTTCAATTGTTTGA
Protein sequence

>MS.gene31895.t1

MSFQQQHGNGGIYNGRGSEAQGMHFYLTVQQRQLQHKQLMICVYLQQNAKLFPSQANIRSESLCRRLQSRLDELAAETAACMTANHPDYASLAARIAVSNLHKNTLKSFSETVKAPLLIADDVYEIIIKNAARLDKMVHSCFSYTFNAGTPRPHLSSCFLVCMKEDSIEGIYDTLKECAVISKSAGGIGVSVHNIRAHGYIWGTNGTSNGIVPMLRVFNHTACYVDQKGAFAVYLEPWHADIVDFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGKLSLFCPNEIVGVKNMISCTLSMKKQEKQKRLFKHGMIPRNFVERYWKNVPNPISLKLPNGSACKMNWVQCSDGIWLQNWKRFAWSLRCGDLLVFQYKGGSDFNVIILDDSKLEIDYSSMRCNGDQENTKESHDDADDDDNDYECVEIPSDTENTKIPLKKKRINSNGIATTAATPQGSNIHKRKTNINATQQKVSEANGNTGGMGKKAKNAQKLNERSCTNSHPNESPSFTVKLSPCHVEGDNRLTIPNCFSKEYMNELLQGKATIRSVGEDRAWHVTLNFRKSRSSFVMRAGWKSFSKEHELKVGDVCKFEMTQREPLSFTIIIIPTTKEPCPEQFQETNENRGGRDKKCTKTKDGNERNCTNSHPNENPSFTLILLPYHVEENQGVHEKSETTPVKDMEYAGNFGDGISRSCTKTHGFRDSVSLNLHEMFKVLITSSDKLVVLPSELLKKHGIFSGNSVELRVGEGTWFVEVNYNEHLDYGWFTKGWQEFVRDCKVKAGDTCLFETIDVQNHVFKVSIV