AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31902

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31902.t1 MTR_1g035400 88.235 578 58 4 1 568 1 578 0.0 976
MS.gene31902.t1 MTR_1g035420 83.559 517 84 1 53 568 143 659 0.0 889
MS.gene31902.t1 MTR_8g070070 66.017 462 153 3 101 558 299 760 0.0 649
MS.gene31902.t1 MTR_8g071030 55.415 554 202 5 50 558 187 740 0.0 624
MS.gene31902.t1 MTR_8g070075 49.365 630 243 6 5 558 124 753 0.0 610
MS.gene31902.t1 MTR_6g044690 55.258 523 195 10 62 556 54 565 0.0 558
MS.gene31902.t1 MTR_0376s0030 51.124 534 221 10 63 568 57 578 6.74e-178 514
MS.gene31902.t1 MTR_6g043960 50.485 515 195 11 70 556 1 483 3.00e-165 479
MS.gene31902.t1 MTR_2g054460 47.619 525 183 13 62 556 3 465 5.24e-151 442
MS.gene31902.t1 MTR_7g088370 39.798 495 276 10 68 556 203 681 1.37e-115 359
MS.gene31902.t1 MTR_3g011440 36.770 514 281 15 68 556 141 635 8.35e-101 319
MS.gene31902.t1 MTR_8g042750 38.370 503 284 13 68 555 167 658 8.99e-101 320
MS.gene31902.t1 MTR_5g013420 36.100 518 295 13 50 553 563 1058 4.58e-94 311
MS.gene31902.t1 MTR_5g013420 36.100 518 295 13 50 553 563 1058 5.48e-94 310
MS.gene31902.t1 MTR_4g010830 33.272 547 330 13 28 561 433 957 8.52e-87 289
MS.gene31902.t1 MTR_4g010550 34.105 475 256 14 94 560 15 440 5.15e-78 254
MS.gene31902.t1 MTR_7g084090 34.940 498 286 13 99 567 258 746 2.41e-77 259
MS.gene31902.t1 MTR_6g061270 34.949 495 289 12 99 567 196 683 7.17e-77 257
MS.gene31902.t1 MTR_6g061200 33.539 486 279 12 99 567 196 654 4.19e-71 241
MS.gene31902.t1 MTR_7g084090 38.547 358 204 8 99 444 258 611 4.98e-66 227
MS.gene31902.t1 MTR_1g048950 31.524 479 269 14 97 553 66 507 2.33e-51 185
MS.gene31902.t1 MTR_7g445710 27.667 600 305 22 5 561 7 520 1.55e-46 171
MS.gene31902.t1 MTR_7g445530 27.534 592 300 22 5 553 7 512 7.21e-46 169
MS.gene31902.t1 MTR_7g450730 29.515 454 232 14 102 553 107 474 1.61e-44 165
MS.gene31902.t1 MTR_7g052480 31.677 322 201 8 262 567 227 545 5.71e-42 159
MS.gene31902.t1 MTR_6g044000 42.500 120 51 1 70 171 1 120 8.38e-27 107
MS.gene31902.t1 MTR_6g044000 59.259 54 22 0 503 556 117 170 5.23e-15 73.6
MS.gene31902.t1 MTR_1g080340 26.774 310 156 11 305 558 269 563 5.98e-20 94.0
MS.gene31902.t1 MTR_1g069570 24.919 309 162 9 305 558 430 723 2.92e-19 92.4
MS.gene31902.t1 MTR_8g078490 26.481 287 156 11 305 553 960 1229 5.72e-17 85.5
MS.gene31902.t1 MTR_5g098680 33.974 156 90 3 127 276 267 415 1.17e-16 84.0
MS.gene31902.t1 MTR_5g018850 34.591 159 86 4 372 526 1312 1456 1.82e-16 84.0
MS.gene31902.t1 MTR_4g132610 27.660 188 114 3 372 553 852 1023 1.18e-15 81.3
MS.gene31902.t1 MTR_8g078505 28.962 183 116 4 372 553 346 515 1.85e-15 79.7
MS.gene31902.t1 MTR_8g102580 31.410 156 94 3 127 276 261 409 4.63e-15 79.0
MS.gene31902.t1 MTR_6g027690 29.612 206 118 7 351 554 217 397 1.41e-14 76.3
MS.gene31902.t1 MTR_3g114910 30.000 150 94 3 127 276 187 325 1.49e-12 70.1
MS.gene31902.t1 MTR_7g445810 31.447 159 89 6 102 255 123 266 1.53e-11 65.5
MS.gene31902.t1 MTR_7g445600 32.540 126 74 3 102 227 106 220 1.77e-11 66.2
MS.gene31902.t1 MTR_1g064770 42.188 64 36 1 384 446 28 91 2.91e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31902.t1 AT4G13460 56.792 530 219 6 37 558 114 641 0.0 616
MS.gene31902.t1 AT4G13460 56.792 530 219 6 37 558 114 641 0.0 616
MS.gene31902.t1 AT2G33290 54.883 512 224 4 53 559 134 643 0.0 582
MS.gene31902.t1 AT2G33290 54.883 512 224 4 53 559 134 643 0.0 582
MS.gene31902.t1 AT2G33290 54.883 512 224 4 53 559 134 643 0.0 582
MS.gene31902.t1 AT2G33290 54.883 512 224 4 53 559 134 643 0.0 582
MS.gene31902.t1 AT5G04940 36.492 496 297 11 68 555 155 640 1.87e-97 311
MS.gene31902.t1 AT5G04940 36.492 496 297 11 68 555 155 640 1.87e-97 311
MS.gene31902.t1 AT1G73100 37.712 472 276 10 103 566 189 650 1.78e-96 308
MS.gene31902.t1 AT1G17770 33.219 581 325 18 3 561 135 674 3.69e-83 274
MS.gene31902.t1 AT2G22740 34.325 504 299 12 68 553 270 759 7.56e-83 275
MS.gene31902.t1 AT2G22740 34.325 504 299 12 68 553 270 759 7.56e-83 275
MS.gene31902.t1 AT2G35160 34.406 497 275 14 68 553 271 727 3.42e-80 267
MS.gene31902.t1 AT2G35160 35.730 459 247 13 103 553 345 763 6.16e-80 267
MS.gene31902.t1 AT2G35160 35.730 459 247 13 103 553 345 763 6.16e-80 267
MS.gene31902.t1 AT2G35160 35.730 459 247 13 103 553 345 763 6.16e-80 267
MS.gene31902.t1 AT2G35160 35.730 459 247 13 103 553 345 763 6.16e-80 267
MS.gene31902.t1 AT5G13960 34.298 484 285 14 94 554 121 594 8.83e-80 263
MS.gene31902.t1 AT5G13960 34.316 475 274 13 102 554 2 460 4.55e-79 257
MS.gene31902.t1 AT2G24740 34.914 464 271 14 99 555 285 724 3.40e-67 232
MS.gene31902.t1 AT5G47150 38.140 215 123 5 64 276 118 324 1.03e-28 117
MS.gene31902.t1 AT5G47160 35.349 215 127 6 61 272 202 407 2.49e-25 108
MS.gene31902.t1 AT5G47160 35.349 215 127 6 61 272 202 407 2.49e-25 108
MS.gene31902.t1 AT5G47160 35.349 215 127 6 61 272 202 407 2.49e-25 108
MS.gene31902.t1 AT2G05900 36.471 170 104 3 164 333 26 191 7.53e-21 94.0
MS.gene31902.t1 AT2G23740 33.511 188 105 5 372 554 1184 1356 5.59e-19 92.0
MS.gene31902.t1 AT2G23740 33.511 188 105 5 372 554 1184 1356 5.59e-19 92.0
MS.gene31902.t1 AT2G23740 33.511 188 105 5 372 554 1184 1356 5.59e-19 92.0
MS.gene31902.t1 AT2G23740 33.511 188 105 5 372 554 1177 1349 6.36e-19 91.7
MS.gene31902.t1 AT1G04050 25.962 312 149 11 305 556 409 698 2.66e-16 82.8
MS.gene31902.t1 AT1G04050 25.962 312 149 11 305 556 409 698 2.66e-16 82.8
MS.gene31902.t1 AT1G04050 25.962 312 149 11 305 556 305 594 3.20e-16 82.4
MS.gene31902.t1 AT3G03750 29.808 208 120 6 348 554 141 323 4.95e-16 80.5
MS.gene31902.t1 AT1G57820 32.484 157 92 4 127 276 277 426 1.68e-15 80.1
MS.gene31902.t1 AT1G57820 32.484 157 92 4 127 276 277 426 1.68e-15 80.1
MS.gene31902.t1 AT1G57820 31.818 154 94 4 127 276 277 423 2.36e-14 76.6
MS.gene31902.t1 AT2G23740 35.616 146 74 5 372 512 1184 1314 2.77e-14 77.0
MS.gene31902.t1 AT2G23740 35.616 146 74 5 372 512 1184 1314 2.77e-14 77.0

Find 160 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTAGTGTGATTGTTTC+TGG 0.079078 1.1:+19630844 MS.gene31902:CDS
GTGGTGGTGGTTGTGGTGTT+AGG 0.222341 1.1:-19630451 None:intergenic
GTTGGAAGTGTTTAGATCTT+TGG 0.227926 1.1:+19631578 MS.gene31902:CDS
CTAGGTTTAGACTTTGATTT+AGG 0.240694 1.1:-19630423 None:intergenic
CTATGATTCGGTTCGTGTTT+TGG 0.241861 1.1:+19630573 MS.gene31902:CDS
TTAGACTTTGATTTAGGTTT+AGG 0.254301 1.1:-19630417 None:intergenic
AGAAGCCCGCTTTGACTATA+AGG 0.293128 1.1:-19631459 None:intergenic
TTTAGGTTTAGGTTGAAGTT+TGG 0.301907 1.1:-19630406 None:intergenic
ACAAATTGAACCATCAGATT+TGG 0.317584 1.1:-19631888 None:intergenic
AGAGATTTCAGCCTTGATTA+TGG 0.322787 1.1:+19631981 MS.gene31902:CDS
AGGATTGTTGGCGCGATTCC+CGG 0.341645 1.1:+19630700 MS.gene31902:CDS
CCCCATTCCGTCCACCTATT+CGG 0.341830 1.1:-19631741 None:intergenic
CCATTTGAACTCATACTTCC+AGG 0.343923 1.1:-19630811 None:intergenic
TTAGGTTTAGGTTGAAGTTT+GGG 0.347297 1.1:-19630405 None:intergenic
TCAAGCTAAGATGGGTAGTT+TGG 0.350493 1.1:+19631167 MS.gene31902:CDS
TTGTGTGTGGTTGGTTTACA+TGG 0.355893 1.1:+19630760 MS.gene31902:CDS
GGATGGAGCGTGTTGGTATA+AGG 0.360343 1.1:+19631268 MS.gene31902:CDS
GTGTTTAGATCTTTGGAAAC+TGG 0.365217 1.1:+19631585 MS.gene31902:CDS
ATGGAGAGGAGTATGCATTA+TGG 0.365705 1.1:+19630982 MS.gene31902:CDS
TAGATCTTTGGAAACTGGTT+GGG 0.370326 1.1:+19631590 MS.gene31902:CDS
TGCATTTGTTTCATGAGAAA+TGG 0.371968 1.1:+19631426 MS.gene31902:CDS
GTGGGATCATCGCCATTCTT+GGG 0.377241 1.1:-19630477 None:intergenic
GTTCGAATTACGAGGATTCA+TGG 0.377792 1.1:-19630341 None:intergenic
AGTGGGATCATCGCCATTCT+TGG 0.379396 1.1:-19630478 None:intergenic
GTAAATGTGTGGGCAGTTGC+AGG 0.381411 1.1:+19631397 MS.gene31902:CDS
GATGTTGGTAAAAGTGGTTT+TGG 0.382231 1.1:+19631111 MS.gene31902:CDS
TCCATCCCGTTGGAAATATC+AGG 0.385210 1.1:-19631252 None:intergenic
TCCGAATAGGTGGACGGAAT+GGG 0.393302 1.1:+19631740 MS.gene31902:CDS
CATTTATATGCGAGTACAGC+GGG 0.395589 1.1:+19631646 MS.gene31902:CDS
CTTGTTCGAATGATGGATCT+AGG 0.404816 1.1:+19630499 MS.gene31902:CDS
GAAGGTACTTCTTTAACTTC+AGG 0.406617 1.1:+19631039 MS.gene31902:CDS
TAAATGTGCCAGCTTGAATA+AGG 0.408878 1.1:-19631629 None:intergenic
GCGATTCCCGGGATTTGTAT+TGG 0.410719 1.1:+19630712 MS.gene31902:CDS
CATTCTTGGGGTGGTGGTGG+TGG 0.411626 1.1:-19630464 None:intergenic
TGGAGAGGAGTATGCATTAT+GGG 0.415278 1.1:+19630983 MS.gene31902:CDS
CGCCATTCTTGGGGTGGTGG+TGG 0.416764 1.1:-19630467 None:intergenic
CACCTATTCGGAAAACGATT+CGG 0.432714 1.1:-19631729 None:intergenic
TTCCGAATAGGTGGACGGAA+TGG 0.432947 1.1:+19631739 MS.gene31902:CDS
GGATTGTTGGCGCGATTCCC+GGG 0.437413 1.1:+19630701 MS.gene31902:CDS
GCTGGGATCGATTATTTGCC+TGG 0.440591 1.1:+19630793 MS.gene31902:CDS
GATTGTTTCTGGTGGATATG+AGG 0.443033 1.1:+19630855 MS.gene31902:CDS
GGTAAGGTTTATGTTTATGA+TGG 0.443436 1.1:+19631060 MS.gene31902:CDS
CACAACAAGGGCTTAATCAT+AGG 0.446724 1.1:+19631556 MS.gene31902:CDS
GTAGCTGTCCGCCTCATTGT+CGG 0.447353 1.1:+19631523 MS.gene31902:CDS
TTTAGGTTGAAGTTTGGGTT+TGG 0.450841 1.1:-19630400 None:intergenic
AATGATGGATCTAGGGTTAT+CGG 0.452809 1.1:+19630507 MS.gene31902:CDS
TCCCTTTGAGTTTCATCCAA+GGG 0.453527 1.1:+19631359 MS.gene31902:CDS
AAATTCAAAGGAAGAATTGA+TGG 0.457852 1.1:-19631807 None:intergenic
GACTAGGATGGTCTATGATT+CGG 0.457902 1.1:+19630561 MS.gene31902:CDS
CATCGCCATTCTTGGGGTGG+TGG 0.458633 1.1:-19630470 None:intergenic
TGTATAAGATTGTTGAAAGC+TGG 0.458955 1.1:+19631085 MS.gene31902:CDS
CCTGGAAGTATGAGTTCAAA+TGG 0.460753 1.1:+19630811 MS.gene31902:CDS
GATTGATGATCAAGCTAAGA+TGG 0.462647 1.1:+19631158 MS.gene31902:CDS
GATCCCACTTGTTCGAATGA+TGG 0.469487 1.1:+19630492 MS.gene31902:CDS
AATCGCAATATGAGGATTGT+TGG 0.469750 1.1:+19630688 MS.gene31902:CDS
TACTTCTTTAACTTCAGGTA+AGG 0.470488 1.1:+19631044 MS.gene31902:CDS
ATACACATAGGTTTATAATC+AGG 0.471074 1.1:-19631222 None:intergenic
CACATCACCAATACAAATCC+CGG 0.471185 1.1:-19630719 None:intergenic
TGCATTATGGGATTGAGGTA+AGG 0.472341 1.1:+19630995 MS.gene31902:CDS
AGGTGATGTTATTATTCTCT+CGG 0.481641 1.1:+19630891 MS.gene31902:CDS
GTTATTATTCTCTCGGGTCA+TGG 0.481758 1.1:+19630898 MS.gene31902:CDS
CACCACCACCACCCCAAGAA+TGG 0.486576 1.1:+19630465 MS.gene31902:CDS
AGGATGGAGTTGTGTGTGGT+TGG 0.488005 1.1:+19630751 MS.gene31902:CDS
AATTTATCTCTAATAGATGA+TGG 0.488280 1.1:+19631765 MS.gene31902:CDS
ATCGGAAAAGCGTCAAATGC+GGG 0.499046 1.1:+19630525 MS.gene31902:CDS
TGTGGCTGAATCGCAATATG+AGG 0.502406 1.1:+19630680 MS.gene31902:CDS
AGATCTTTGGAAACTGGTTG+GGG 0.504345 1.1:+19631591 MS.gene31902:CDS
GGTGATGTTATTATTCTCTC+GGG 0.504399 1.1:+19630892 MS.gene31902:CDS
ATTGTTTCTGGTGGATATGA+GGG 0.508794 1.1:+19630856 MS.gene31902:CDS
TGGTGTGATGTTGGTAAAAG+TGG 0.509931 1.1:+19631105 MS.gene31902:CDS
TTCCCTTTGAGTTTCATCCA+AGG 0.510250 1.1:+19631358 MS.gene31902:CDS
TATCTCCTGATATTTCCAAC+GGG 0.517150 1.1:+19631247 MS.gene31902:CDS
TCATTTGACCTTATTCAAGC+TGG 0.519192 1.1:+19631621 MS.gene31902:CDS
TAAAACTATGCTGTTTGCGA+TGG 0.519235 1.1:+19631941 MS.gene31902:CDS
CCCCTTGGATGAAACTCAAA+GGG 0.519814 1.1:-19631360 None:intergenic
GCTTTCCTTATAGTCAAAGC+GGG 0.522811 1.1:+19631454 MS.gene31902:CDS
CGGAACCGTGTTACACAACA+AGG 0.524134 1.1:+19631543 MS.gene31902:CDS
ACAATCACACTAGTAGCAAT+CGG 0.525852 1.1:-19630838 None:intergenic
TCTCTCGGGTCATGGTGGGC+AGG 0.526040 1.1:+19630906 MS.gene31902:CDS
GAGAAACTAGGTGGTGCTGA+TGG 0.529233 1.1:-19630373 None:intergenic
TGGAAACTGGTTGGGGAGTG+AGG 0.530566 1.1:+19631598 MS.gene31902:CDS
TGAGGCGGACAGCTACAATC+AGG 0.531632 1.1:-19631516 None:intergenic
GAGTATGCATTATGGGATTG+AGG 0.534486 1.1:+19630990 MS.gene31902:CDS
GGGTTTGGTAAAGAGAAACT+AGG 0.536488 1.1:-19630385 None:intergenic
GTTGAAAGCTGGTGTGATGT+TGG 0.536898 1.1:+19631096 MS.gene31902:CDS
ACTAGTGTGATTGTTTCTGG+TGG 0.538664 1.1:+19630847 MS.gene31902:CDS
TCATCAGAAGCTAGAAGGAG+GGG 0.538962 1.1:+19630951 MS.gene31902:CDS
TTAGATCTTTGGAAACTGGT+TGG 0.541400 1.1:+19631589 MS.gene31902:CDS
TCCTGATATTTCCAACGGGA+TGG 0.545378 1.1:+19631251 MS.gene31902:CDS
GCATTATGGGATTGAGGTAA+GGG 0.545569 1.1:+19630996 MS.gene31902:CDS
TTGTTCGAATGATGGATCTA+GGG 0.546442 1.1:+19630500 MS.gene31902:CDS
TTATTCTCTCGGGTCATGGT+GGG 0.547783 1.1:+19630902 MS.gene31902:CDS
TCAAGGCTGAAATCTCTCAA+TGG 0.553800 1.1:-19631975 None:intergenic
CAAAGCGGGCTTCTCTTGAA+AGG 0.554951 1.1:+19631468 MS.gene31902:CDS
ACAAGGGCTTAATCATAGGT+TGG 0.555207 1.1:+19631560 MS.gene31902:CDS
AGAAGGAGGGGATCTTGCTA+TGG 0.555793 1.1:+19630963 MS.gene31902:CDS
ATATCTCCTGATATTTCCAA+CGG 0.556018 1.1:+19631246 MS.gene31902:CDS
GCTTCTCTTGAAAGGAAAGC+CGG 0.556611 1.1:+19631476 MS.gene31902:CDS
AGATCCATCATTCGAACAAG+TGG 0.558589 1.1:-19630496 None:intergenic
TTGGCTATGGCTGAAGATGA+AGG 0.558623 1.1:+19630592 MS.gene31902:CDS
CGATGAGGAGTCGAGGATTG+TGG 0.563315 1.1:+19630662 MS.gene31902:CDS
CCGAATAGGTGGACGGAATG+GGG 0.564405 1.1:+19631741 MS.gene31902:CDS
ACTAGGTGGTGCTGATGGAA+AGG 0.564524 1.1:-19630368 None:intergenic
GGAAGAATTGATGGATACGA+AGG 0.565248 1.1:-19631798 None:intergenic
GAAATCTCTCAATGGAGGGA+TGG 0.567762 1.1:-19631967 None:intergenic
CATCATCTACACCATAATCA+AGG 0.569450 1.1:-19631992 None:intergenic
TTACATGGTGAACCACAAGC+TGG 0.570814 1.1:+19630775 MS.gene31902:CDS
CTCTGGACGTGTCTAGAATG+AGG 0.571022 1.1:+19631832 MS.gene31902:CDS
CCCTTTGAGTTTCATCCAAG+GGG 0.573842 1.1:+19631360 MS.gene31902:CDS
TTCATCAGAAGCTAGAAGGA+GGG 0.573844 1.1:+19630950 MS.gene31902:CDS
GTATAGGATGGAGTTGTGTG+TGG 0.574388 1.1:+19630747 MS.gene31902:CDS
GGCTGAAATCTCTCAATGGA+GGG 0.575518 1.1:-19631971 None:intergenic
TACATGGTGAACCACAAGCT+GGG 0.577042 1.1:+19630776 MS.gene31902:CDS
TGGGATCATCGCCATTCTTG+GGG 0.577937 1.1:-19630476 None:intergenic
GGGATGTTGTTCGAAGGACT+AGG 0.579467 1.1:+19630545 MS.gene31902:CDS
GTGGTGCTGATGGAAAGGTT+TGG 0.585875 1.1:-19630363 None:intergenic
ATGGTGGGCAGGATAAGAAT+CGG 0.592281 1.1:+19630917 MS.gene31902:CDS
ATTATTCTCTCGGGTCATGG+TGG 0.592834 1.1:+19630901 MS.gene31902:CDS
TAGCTCAACTCCAAATCTGA+TGG 0.593289 1.1:+19631878 MS.gene31902:CDS
ATTGATGATCAAGCTAAGAT+GGG 0.593619 1.1:+19631159 MS.gene31902:CDS
TAAGCCCTTGTTGTGTAACA+CGG 0.598036 1.1:-19631548 None:intergenic
AGGCTGAAATCTCTCAATGG+AGG 0.598790 1.1:-19631972 None:intergenic
ACCAACACGCTCCATCCCGT+TGG 0.599403 1.1:-19631262 None:intergenic
ACAGCGGGGTTGTTCTAACA+AGG 0.600545 1.1:+19631661 MS.gene31902:CDS
TTTCATCAGAAGCTAGAAGG+AGG 0.601171 1.1:+19630949 MS.gene31902:CDS
GCAGAAATTATGACTATGAG+TGG 0.602784 1.1:+19631690 MS.gene31902:CDS
ACGTCCAGAGCAAAATTCAA+AGG 0.609054 1.1:-19631819 None:intergenic
ACATCACCAATACAAATCCC+GGG 0.611261 1.1:-19630718 None:intergenic
TGTGTGGGCAGTTGCAGGGA+AGG 0.614573 1.1:+19631402 MS.gene31902:CDS
GAGGGGATCTTGCTATGGAG+AGG 0.622960 1.1:+19630968 MS.gene31902:CDS
TCAGGAGATATAATACACAT+AGG 0.624086 1.1:-19631234 None:intergenic
TGAGACAGGTTGTAAATGTG+TGG 0.625021 1.1:+19631386 MS.gene31902:CDS
TATCGGAAAAGCGTCAAATG+CGG 0.625063 1.1:+19630524 MS.gene31902:CDS
ATCCGCGCTGTGAGGTACGA+AGG 0.625946 1.1:+19631021 MS.gene31902:CDS
GGAAGATACTCAAAATACAT+CGG 0.630650 1.1:-19631321 None:intergenic
AGCTTTCCTTATAGTCAAAG+CGG 0.631436 1.1:+19631453 MS.gene31902:CDS
AAATAATCGATCCCAGCTTG+TGG 0.632977 1.1:-19630787 None:intergenic
TATGAGGGTGATGTTGATGA+AGG 0.637266 1.1:+19630871 MS.gene31902:CDS
TAAATGTGTGGGCAGTTGCA+GGG 0.639917 1.1:+19631398 MS.gene31902:CDS
GATCATCGCCATTCTTGGGG+TGG 0.645526 1.1:-19630473 None:intergenic
AAGGTTTGGTTCGAATTACG+AGG 0.645721 1.1:-19630349 None:intergenic
AAATGCGGGATGTTGTTCGA+AGG 0.647284 1.1:+19630539 MS.gene31902:CDS
GAGACAGGTTGTAAATGTGT+GGG 0.652888 1.1:+19631387 MS.gene31902:CDS
TGTTGTTCGAAGGACTAGGA+TGG 0.654135 1.1:+19630549 MS.gene31902:CDS
GATCCATCATTCGAACAAGT+GGG 0.654854 1.1:-19630495 None:intergenic
TGAAAGCTTCTGCTACGATG+AGG 0.658793 1.1:+19630647 MS.gene31902:CDS
CCTTTGAGTTTCATCCAAGG+GGG 0.661963 1.1:+19631361 MS.gene31902:CDS
TCCAACGGGATGGAGCGTGT+TGG 0.665494 1.1:+19631261 MS.gene31902:CDS
TAAGGGTCATCCGCGCTGTG+AGG 0.665597 1.1:+19631013 MS.gene31902:CDS
TCTGCTACGATGAGGAGTCG+AGG 0.674570 1.1:+19630655 MS.gene31902:CDS
ACATTTATATGCGAGTACAG+CGG 0.676169 1.1:+19631645 MS.gene31902:CDS
ACACGGTTCCGACAATGAGG+CGG 0.681770 1.1:-19631531 None:intergenic
GTGGGCAGGATAAGAATCGG+AGG 0.693208 1.1:+19630920 MS.gene31902:CDS
CAGCGGGGTTGTTCTAACAA+GGG 0.700564 1.1:+19631662 MS.gene31902:CDS
GTAACACGGTTCCGACAATG+AGG 0.703986 1.1:-19631534 None:intergenic
CGTGTCTAGAATGAGGAATG+TGG 0.710491 1.1:+19631839 MS.gene31902:CDS
ATTTATATGCGAGTACAGCG+GGG 0.724918 1.1:+19631647 MS.gene31902:CDS
TTTGGTAAAGAGAAACTAGG+TGG 0.736473 1.1:-19630382 None:intergenic
TACCTTCGTACCTCACAGCG+CGG 0.749117 1.1:-19631023 None:intergenic
GGAACCGTGTTACACAACAA+GGG 0.763258 1.1:+19631544 MS.gene31902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATCTCTAATAGATGA+TGG + chr1.1:19631765-19631784 MS.gene31902:CDS 20.0%
! AAATTCAAAGGAAGAATTGA+TGG - chr1.1:19631810-19631829 None:intergenic 25.0%
! ATACACATAGGTTTATAATC+AGG - chr1.1:19631225-19631244 None:intergenic 25.0%
!! TTAGACTTTGATTTAGGTTT+AGG - chr1.1:19630420-19630439 None:intergenic 25.0%
!!! TTTTTAAGTTTATGTTGTCG+AGG + chr1.1:19631136-19631155 MS.gene31902:CDS 25.0%
ACAAATTGAACCATCAGATT+TGG - chr1.1:19631891-19631910 None:intergenic 30.0%
AGGTGATGTTATTATTCTCT+CGG + chr1.1:19630891-19630910 MS.gene31902:CDS 30.0%
ATATCTCCTGATATTTCCAA+CGG + chr1.1:19631246-19631265 MS.gene31902:CDS 30.0%
GGAAGATACTCAAAATACAT+CGG - chr1.1:19631324-19631343 None:intergenic 30.0%
GGTAAGGTTTATGTTTATGA+TGG + chr1.1:19631060-19631079 MS.gene31902:CDS 30.0%
TCAGGAGATATAATACACAT+AGG - chr1.1:19631237-19631256 None:intergenic 30.0%
TGCATTTGTTTCATGAGAAA+TGG + chr1.1:19631426-19631445 MS.gene31902:CDS 30.0%
TGTATAAGATTGTTGAAAGC+TGG + chr1.1:19631085-19631104 MS.gene31902:CDS 30.0%
! ATTGATGATCAAGCTAAGAT+GGG + chr1.1:19631159-19631178 MS.gene31902:CDS 30.0%
! CTAGGTTTAGACTTTGATTT+AGG - chr1.1:19630426-19630445 None:intergenic 30.0%
! TACTTCTTTAACTTCAGGTA+AGG + chr1.1:19631044-19631063 MS.gene31902:CDS 30.0%
!! GTATTTTGAGTATCTTCCTA+GGG + chr1.1:19631326-19631345 MS.gene31902:CDS 30.0%
!! TGATGTGTTTTTGTATAGGA+TGG + chr1.1:19630735-19630754 MS.gene31902:CDS 30.0%
!! TGTATTTTGAGTATCTTCCT+AGG + chr1.1:19631325-19631344 MS.gene31902:CDS 30.0%
!! TTAGGTTTAGGTTGAAGTTT+GGG - chr1.1:19630408-19630427 None:intergenic 30.0%
!! TTTAGGTTTAGGTTGAAGTT+TGG - chr1.1:19630409-19630428 None:intergenic 30.0%
!!! TTGGTGATGTGTTTTTGTAT+AGG + chr1.1:19630731-19630750 MS.gene31902:CDS 30.0%
AATCGCAATATGAGGATTGT+TGG + chr1.1:19630688-19630707 MS.gene31902:CDS 35.0%
ACAATCACACTAGTAGCAAT+CGG - chr1.1:19630841-19630860 None:intergenic 35.0%
ACATTTATATGCGAGTACAG+CGG + chr1.1:19631645-19631664 MS.gene31902:CDS 35.0%
AGAGATTTCAGCCTTGATTA+TGG + chr1.1:19631981-19632000 MS.gene31902:CDS 35.0%
AGCTTTCCTTATAGTCAAAG+CGG + chr1.1:19631453-19631472 MS.gene31902:CDS 35.0%
CATCATCTACACCATAATCA+AGG - chr1.1:19631995-19632014 None:intergenic 35.0%
GCAGAAATTATGACTATGAG+TGG + chr1.1:19631690-19631709 MS.gene31902:CDS 35.0%
GGTGATGTTATTATTCTCTC+GGG + chr1.1:19630892-19630911 MS.gene31902:CDS 35.0%
TAAATGTGCCAGCTTGAATA+AGG - chr1.1:19631632-19631651 None:intergenic 35.0%
TATCTCCTGATATTTCCAAC+GGG + chr1.1:19631247-19631266 MS.gene31902:CDS 35.0%
TCATTTGACCTTATTCAAGC+TGG + chr1.1:19631621-19631640 MS.gene31902:CDS 35.0%
TTTGGTAAAGAGAAACTAGG+TGG - chr1.1:19630385-19630404 None:intergenic 35.0%
! GATTGATGATCAAGCTAAGA+TGG + chr1.1:19631158-19631177 MS.gene31902:CDS 35.0%
! GTGTTTAGATCTTTGGAAAC+TGG + chr1.1:19631585-19631604 MS.gene31902:CDS 35.0%
! GTTTTTCATCAGAAGCTAGA+AGG + chr1.1:19630946-19630965 MS.gene31902:CDS 35.0%
! TAAAACTATGCTGTTTGCGA+TGG + chr1.1:19631941-19631960 MS.gene31902:CDS 35.0%
! TAGATCTTTGGAAACTGGTT+GGG + chr1.1:19631590-19631609 MS.gene31902:CDS 35.0%
! TCTTCCTTTGAATTTTGCTC+TGG + chr1.1:19631815-19631834 MS.gene31902:CDS 35.0%
! TTAGATCTTTGGAAACTGGT+TGG + chr1.1:19631589-19631608 MS.gene31902:CDS 35.0%
!! AATGATGGATCTAGGGTTAT+CGG + chr1.1:19630507-19630526 MS.gene31902:CDS 35.0%
!! ATTGTTTCTGGTGGATATGA+GGG + chr1.1:19630856-19630875 MS.gene31902:CDS 35.0%
!! GAAGGTACTTCTTTAACTTC+AGG + chr1.1:19631039-19631058 MS.gene31902:CDS 35.0%
!! GATGTTGGTAAAAGTGGTTT+TGG + chr1.1:19631111-19631130 MS.gene31902:CDS 35.0%
!! GTTGGAAGTGTTTAGATCTT+TGG + chr1.1:19631578-19631597 MS.gene31902:CDS 35.0%
!! TCGCAAACAGCATAGTTTTA+AGG - chr1.1:19631941-19631960 None:intergenic 35.0%
!! TTGTGGTGTTAGGTTTTTCT+AGG - chr1.1:19630444-19630463 None:intergenic 35.0%
!! TTGTTCGAATGATGGATCTA+GGG + chr1.1:19630500-19630519 MS.gene31902:CDS 35.0%
!! TTTAGGTTGAAGTTTGGGTT+TGG - chr1.1:19630403-19630422 None:intergenic 35.0%
!!! GATGGGTAGTTTGGTTTTAA+AGG + chr1.1:19631176-19631195 MS.gene31902:CDS 35.0%
AAATAATCGATCCCAGCTTG+TGG - chr1.1:19630790-19630809 None:intergenic 40.0%
AAGGGAAAAAAAGTAGCCCT+AGG - chr1.1:19631345-19631364 None:intergenic 40.0%
ACAAGGGCTTAATCATAGGT+TGG + chr1.1:19631560-19631579 MS.gene31902:CDS 40.0%
ACATCACCAATACAAATCCC+GGG - chr1.1:19630721-19630740 None:intergenic 40.0%
ACGTCCAGAGCAAAATTCAA+AGG - chr1.1:19631822-19631841 None:intergenic 40.0%
AGATCCATCATTCGAACAAG+TGG - chr1.1:19630499-19630518 None:intergenic 40.0%
ATTTATATGCGAGTACAGCG+GGG + chr1.1:19631647-19631666 MS.gene31902:CDS 40.0%
CACAACAAGGGCTTAATCAT+AGG + chr1.1:19631556-19631575 MS.gene31902:CDS 40.0%
CACATCACCAATACAAATCC+CGG - chr1.1:19630722-19630741 None:intergenic 40.0%
CACCTATTCGGAAAACGATT+CGG - chr1.1:19631732-19631751 None:intergenic 40.0%
CATTTATATGCGAGTACAGC+GGG + chr1.1:19631646-19631665 MS.gene31902:CDS 40.0%
CCATTTGAACTCATACTTCC+AGG - chr1.1:19630814-19630833 None:intergenic 40.0%
GACTAGGATGGTCTATGATT+CGG + chr1.1:19630561-19630580 MS.gene31902:CDS 40.0%
GAGACAGGTTGTAAATGTGT+GGG + chr1.1:19631387-19631406 MS.gene31902:CDS 40.0%
GAGTATGCATTATGGGATTG+AGG + chr1.1:19630990-19631009 MS.gene31902:CDS 40.0%
GATCCATCATTCGAACAAGT+GGG - chr1.1:19630498-19630517 None:intergenic 40.0%
GCATTATGGGATTGAGGTAA+GGG + chr1.1:19630996-19631015 MS.gene31902:CDS 40.0%
GCTACTAGTGTGATTGTTTC+TGG + chr1.1:19630844-19630863 MS.gene31902:CDS 40.0%
GCTTTCCTTATAGTCAAAGC+GGG + chr1.1:19631454-19631473 MS.gene31902:CDS 40.0%
GGACCACATTCAAAAATGAC+CGG - chr1.1:19631498-19631517 None:intergenic 40.0%
GTTATTATTCTCTCGGGTCA+TGG + chr1.1:19630898-19630917 MS.gene31902:CDS 40.0%
TAGCTCAACTCCAAATCTGA+TGG + chr1.1:19631878-19631897 MS.gene31902:CDS 40.0%
TCAAGCTAAGATGGGTAGTT+TGG + chr1.1:19631167-19631186 MS.gene31902:CDS 40.0%
TCAAGGCTGAAATCTCTCAA+TGG - chr1.1:19631978-19631997 None:intergenic 40.0%
TGAGACAGGTTGTAAATGTG+TGG + chr1.1:19631386-19631405 MS.gene31902:CDS 40.0%
TGCATTATGGGATTGAGGTA+AGG + chr1.1:19630995-19631014 MS.gene31902:CDS 40.0%
TTCATCAGAAGCTAGAAGGA+GGG + chr1.1:19630950-19630969 MS.gene31902:CDS 40.0%
TTTCATCAGAAGCTAGAAGG+AGG + chr1.1:19630949-19630968 MS.gene31902:CDS 40.0%
! AAGGTTTGGTTCGAATTACG+AGG - chr1.1:19630352-19630371 None:intergenic 40.0%
! AGATCTTTGGAAACTGGTTG+GGG + chr1.1:19631591-19631610 MS.gene31902:CDS 40.0%
! ATCCGAATCGTTTTCCGAAT+AGG + chr1.1:19631727-19631746 MS.gene31902:CDS 40.0%
! ATGGAGAGGAGTATGCATTA+TGG + chr1.1:19630982-19631001 MS.gene31902:CDS 40.0%
! CCTGGAAGTATGAGTTCAAA+TGG + chr1.1:19630811-19630830 MS.gene31902:CDS 40.0%
! GGAAGAATTGATGGATACGA+AGG - chr1.1:19631801-19631820 None:intergenic 40.0%
! GGGTTTGGTAAAGAGAAACT+AGG - chr1.1:19630388-19630407 None:intergenic 40.0%
! TAAGCCCTTGTTGTGTAACA+CGG - chr1.1:19631551-19631570 None:intergenic 40.0%
! TATGAGGGTGATGTTGATGA+AGG + chr1.1:19630871-19630890 MS.gene31902:CDS 40.0%
! TCCCTTTGAGTTTCATCCAA+GGG + chr1.1:19631359-19631378 MS.gene31902:CDS 40.0%
! TGGAGAGGAGTATGCATTAT+GGG + chr1.1:19630983-19631002 MS.gene31902:CDS 40.0%
! TGGTGTGATGTTGGTAAAAG+TGG + chr1.1:19631105-19631124 MS.gene31902:CDS 40.0%
! TTCCCTTTGAGTTTCATCCA+AGG + chr1.1:19631358-19631377 MS.gene31902:CDS 40.0%
!! ACTAGTGTGATTGTTTCTGG+TGG + chr1.1:19630847-19630866 MS.gene31902:CDS 40.0%
!! CTTGTTCGAATGATGGATCT+AGG + chr1.1:19630499-19630518 MS.gene31902:CDS 40.0%
!! GATTGTTTCTGGTGGATATG+AGG + chr1.1:19630855-19630874 MS.gene31902:CDS 40.0%
!! TATCGGAAAAGCGTCAAATG+CGG + chr1.1:19630524-19630543 MS.gene31902:CDS 40.0%
!! TTGTGTGTGGTTGGTTTACA+TGG + chr1.1:19630760-19630779 MS.gene31902:CDS 40.0%
!!! AAGCCGGTCATTTTTGAATG+TGG + chr1.1:19631492-19631511 MS.gene31902:CDS 40.0%
!!! CTATGATTCGGTTCGTGTTT+TGG + chr1.1:19630573-19630592 MS.gene31902:CDS 40.0%
!!! GGGTAGTTTGGTTTTAAAGG+AGG + chr1.1:19631179-19631198 MS.gene31902:CDS 40.0%
!!! TAAAGGAGGCTTTTTTGCGT+AGG + chr1.1:19631193-19631212 MS.gene31902:CDS 40.0%
AAATGCGGGATGTTGTTCGA+AGG + chr1.1:19630539-19630558 MS.gene31902:CDS 45.0%
AGAAGCCCGCTTTGACTATA+AGG - chr1.1:19631462-19631481 None:intergenic 45.0%
AGGCTGAAATCTCTCAATGG+AGG - chr1.1:19631975-19631994 None:intergenic 45.0%
ATTATTCTCTCGGGTCATGG+TGG + chr1.1:19630901-19630920 MS.gene31902:CDS 45.0%
CCCCTTGGATGAAACTCAAA+GGG - chr1.1:19631363-19631382 None:intergenic 45.0%
GAAATCTCTCAATGGAGGGA+TGG - chr1.1:19631970-19631989 None:intergenic 45.0%
GATCCCACTTGTTCGAATGA+TGG + chr1.1:19630492-19630511 MS.gene31902:CDS 45.0%
GCTTCTCTTGAAAGGAAAGC+CGG + chr1.1:19631476-19631495 MS.gene31902:CDS 45.0%
GGAACCGTGTTACACAACAA+GGG + chr1.1:19631544-19631563 MS.gene31902:CDS 45.0%
GGCTGAAATCTCTCAATGGA+GGG - chr1.1:19631974-19631993 None:intergenic 45.0%
GTATAGGATGGAGTTGTGTG+TGG + chr1.1:19630747-19630766 MS.gene31902:CDS 45.0%
GTTGAAAGCTGGTGTGATGT+TGG + chr1.1:19631096-19631115 MS.gene31902:CDS 45.0%
TAAATGTGTGGGCAGTTGCA+GGG + chr1.1:19631398-19631417 MS.gene31902:CDS 45.0%
TACATGGTGAACCACAAGCT+GGG + chr1.1:19630776-19630795 MS.gene31902:CDS 45.0%
TCATCAGAAGCTAGAAGGAG+GGG + chr1.1:19630951-19630970 MS.gene31902:CDS 45.0%
TCCATCCCGTTGGAAATATC+AGG - chr1.1:19631255-19631274 None:intergenic 45.0%
TCCTGATATTTCCAACGGGA+TGG + chr1.1:19631251-19631270 MS.gene31902:CDS 45.0%
TGAAAGCTTCTGCTACGATG+AGG + chr1.1:19630647-19630666 MS.gene31902:CDS 45.0%
TGTGGCTGAATCGCAATATG+AGG + chr1.1:19630680-19630699 MS.gene31902:CDS 45.0%
TGTTGTTCGAAGGACTAGGA+TGG + chr1.1:19630549-19630568 MS.gene31902:CDS 45.0%
TTACATGGTGAACCACAAGC+TGG + chr1.1:19630775-19630794 MS.gene31902:CDS 45.0%
TTATTCTCTCGGGTCATGGT+GGG + chr1.1:19630902-19630921 MS.gene31902:CDS 45.0%
TTGGCTATGGCTGAAGATGA+AGG + chr1.1:19630592-19630611 MS.gene31902:CDS 45.0%
! CCCTTTGAGTTTCATCCAAG+GGG + chr1.1:19631360-19631379 MS.gene31902:CDS 45.0%
! CCTTTGAGTTTCATCCAAGG+GGG + chr1.1:19631361-19631380 MS.gene31902:CDS 45.0%
! CGAATCGTTTTCCGAATAGG+TGG + chr1.1:19631730-19631749 MS.gene31902:CDS 45.0%
! CGTGTCTAGAATGAGGAATG+TGG + chr1.1:19631839-19631858 MS.gene31902:CDS 45.0%
! TCGTTTTCCGAATAGGTGGA+CGG + chr1.1:19631734-19631753 MS.gene31902:CDS 45.0%
!! ATCGGAAAAGCGTCAAATGC+GGG + chr1.1:19630525-19630544 MS.gene31902:CDS 45.0%
!! ATGGTGGGCAGGATAAGAAT+CGG + chr1.1:19630917-19630936 MS.gene31902:CDS 45.0%
!!! TTCGGTTCGTGTTTTGGCTA+TGG + chr1.1:19630579-19630598 MS.gene31902:CDS 45.0%
ACAGCGGGGTTGTTCTAACA+AGG + chr1.1:19631661-19631680 MS.gene31902:CDS 50.0%
AGAAGGAGGGGATCTTGCTA+TGG + chr1.1:19630963-19630982 MS.gene31902:CDS 50.0%
AGGATGGAGTTGTGTGTGGT+TGG + chr1.1:19630751-19630770 MS.gene31902:CDS 50.0%
AGTGGGATCATCGCCATTCT+TGG - chr1.1:19630481-19630500 None:intergenic 50.0%
CAGCGGGGTTGTTCTAACAA+GGG + chr1.1:19631662-19631681 MS.gene31902:CDS 50.0%
CCCCCTTGGATGAAACTCAA+AGG - chr1.1:19631364-19631383 None:intergenic 50.0%
CGGAACCGTGTTACACAACA+AGG + chr1.1:19631543-19631562 MS.gene31902:CDS 50.0%
GCGATTCCCGGGATTTGTAT+TGG + chr1.1:19630712-19630731 MS.gene31902:CDS 50.0%
GCTGGGATCGATTATTTGCC+TGG + chr1.1:19630793-19630812 MS.gene31902:CDS 50.0%
GGGATGTTGTTCGAAGGACT+AGG + chr1.1:19630545-19630564 MS.gene31902:CDS 50.0%
GTAAATGTGTGGGCAGTTGC+AGG + chr1.1:19631397-19631416 MS.gene31902:CDS 50.0%
GTAACACGGTTCCGACAATG+AGG - chr1.1:19631537-19631556 None:intergenic 50.0%
GTGGGATCATCGCCATTCTT+GGG - chr1.1:19630480-19630499 None:intergenic 50.0%
TCCGAATAGGTGGACGGAAT+GGG + chr1.1:19631740-19631759 MS.gene31902:CDS 50.0%
TGGGATCATCGCCATTCTTG+GGG - chr1.1:19630479-19630498 None:intergenic 50.0%
TTCCGAATAGGTGGACGGAA+TGG + chr1.1:19631739-19631758 MS.gene31902:CDS 50.0%
! CAAAGCGGGCTTCTCTTGAA+AGG + chr1.1:19631468-19631487 MS.gene31902:CDS 50.0%
! CTCTGGACGTGTCTAGAATG+AGG + chr1.1:19631832-19631851 MS.gene31902:CDS 50.0%
! GAGAAACTAGGTGGTGCTGA+TGG - chr1.1:19630376-19630395 None:intergenic 50.0%
! GGATGGAGCGTGTTGGTATA+AGG + chr1.1:19631268-19631287 MS.gene31902:CDS 50.0%
!! ACTAGGTGGTGCTGATGGAA+AGG - chr1.1:19630371-19630390 None:intergenic 50.0%
!! GTGGTGCTGATGGAAAGGTT+TGG - chr1.1:19630366-19630385 None:intergenic 50.0%
ACACGGTTCCGACAATGAGG+CGG - chr1.1:19631534-19631553 None:intergenic 55.0%
AGGATTGTTGGCGCGATTCC+CGG + chr1.1:19630700-19630719 MS.gene31902:CDS 55.0%
CAACCTGTCTCATTCCCCCT+TGG - chr1.1:19631378-19631397 None:intergenic 55.0%
CATCCAAGGGGGAATGAGAC+AGG + chr1.1:19631372-19631391 MS.gene31902:CDS 55.0%
CCCCATTCCGTCCACCTATT+CGG - chr1.1:19631744-19631763 None:intergenic 55.0%
CCGAATAGGTGGACGGAATG+GGG + chr1.1:19631741-19631760 MS.gene31902:CDS 55.0%
CGATGAGGAGTCGAGGATTG+TGG + chr1.1:19630662-19630681 MS.gene31902:CDS 55.0%
GATCATCGCCATTCTTGGGG+TGG - chr1.1:19630476-19630495 None:intergenic 55.0%
GTAGCTGTCCGCCTCATTGT+CGG + chr1.1:19631523-19631542 MS.gene31902:CDS 55.0%
GTGGGCAGGATAAGAATCGG+AGG + chr1.1:19630920-19630939 MS.gene31902:CDS 55.0%
TACCTTCGTACCTCACAGCG+CGG - chr1.1:19631026-19631045 None:intergenic 55.0%
TCTGCTACGATGAGGAGTCG+AGG + chr1.1:19630655-19630674 MS.gene31902:CDS 55.0%
TGAGGCGGACAGCTACAATC+AGG - chr1.1:19631519-19631538 None:intergenic 55.0%
TGGAAACTGGTTGGGGAGTG+AGG + chr1.1:19631598-19631617 MS.gene31902:CDS 55.0%
! GAGGGGATCTTGCTATGGAG+AGG + chr1.1:19630968-19630987 MS.gene31902:CDS 55.0%
!! GTGGTGGTGGTTGTGGTGTT+AGG - chr1.1:19630454-19630473 None:intergenic 55.0%
ACCAACACGCTCCATCCCGT+TGG - chr1.1:19631265-19631284 None:intergenic 60.0%
ATCCGCGCTGTGAGGTACGA+AGG + chr1.1:19631021-19631040 MS.gene31902:CDS 60.0%
CACCACCACCACCCCAAGAA+TGG + chr1.1:19630465-19630484 MS.gene31902:CDS 60.0%
CATCGCCATTCTTGGGGTGG+TGG - chr1.1:19630473-19630492 None:intergenic 60.0%
GGATTGTTGGCGCGATTCCC+GGG + chr1.1:19630701-19630720 MS.gene31902:CDS 60.0%
TAAGGGTCATCCGCGCTGTG+AGG + chr1.1:19631013-19631032 MS.gene31902:CDS 60.0%
TCCAACGGGATGGAGCGTGT+TGG + chr1.1:19631261-19631280 MS.gene31902:CDS 60.0%
TGTGTGGGCAGTTGCAGGGA+AGG + chr1.1:19631402-19631421 MS.gene31902:CDS 60.0%
!! CATTCTTGGGGTGGTGGTGG+TGG - chr1.1:19630467-19630486 None:intergenic 60.0%
! CGCCATTCTTGGGGTGGTGG+TGG - chr1.1:19630470-19630489 None:intergenic 65.0%
!! TCTCTCGGGTCATGGTGGGC+AGG + chr1.1:19630906-19630925 MS.gene31902:CDS 65.0%
!! TGGGGTGGTGGTGGTGGTTG+TGG - chr1.1:19630461-19630480 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 19630343 19632049 19630343 ID=MS.gene31902
chr1.1 mRNA 19630343 19632049 19630343 ID=MS.gene31902.t1;Parent=MS.gene31902
chr1.1 exon 19630343 19632049 19630343 ID=MS.gene31902.t1.exon1;Parent=MS.gene31902.t1
chr1.1 CDS 19630343 19632049 19630343 ID=cds.MS.gene31902.t1;Parent=MS.gene31902.t1
Gene Sequence

>MS.gene31902

ATGAATCCTCGTAATTCGAACCAAACCTTTCCATCAGCACCACCTAGTTTCTCTTTACCAAACCCAAACTTCAACCTAAACCTAAATCAAAGTCTAAACCTAGAAAAACCTAACACCACAACCACCACCACCACCCCAAGAATGGCGATGATCCCACTTGTTCGAATGATGGATCTAGGGTTATCGGAAAAGCGTCAAATGCGGGATGTTGTTCGAAGGACTAGGATGGTCTATGATTCGGTTCGTGTTTTGGCTATGGCTGAAGATGAAGGATATTTTAATGCTAGAAGAGTGAGAAGTGATTTGAAAGCTTCTGCTACGATGAGGAGTCGAGGATTGTGGCTGAATCGCAATATGAGGATTGTTGGCGCGATTCCCGGGATTTGTATTGGTGATGTGTTTTTGTATAGGATGGAGTTGTGTGTGGTTGGTTTACATGGTGAACCACAAGCTGGGATCGATTATTTGCCTGGAAGTATGAGTTCAAATGGCGATCCGATTGCTACTAGTGTGATTGTTTCTGGTGGATATGAGGGTGATGTTGATGAAGGTGATGTTATTATTCTCTCGGGTCATGGTGGGCAGGATAAGAATCGGAGGCAAGTTTTTCATCAGAAGCTAGAAGGAGGGGATCTTGCTATGGAGAGGAGTATGCATTATGGGATTGAGGTAAGGGTCATCCGCGCTGTGAGGTACGAAGGTACTTCTTTAACTTCAGGTAAGGTTTATGTTTATGATGGTTTGTATAAGATTGTTGAAAGCTGGTGTGATGTTGGTAAAAGTGGTTTTGGTGTTTTTAAGTTTATGTTGTCGAGGATTGATGATCAAGCTAAGATGGGTAGTTTGGTTTTAAAGGAGGCTTTTTTGCGTAGGAACGATCCTGATTATAAACCTATGTGTATTATATCTCCTGATATTTCCAACGGGATGGAGCGTGTTGGTATAAGGCTTTTTAATGATATTGATGAATGTAAAGATCCGATGTATTTTGAGTATCTTCCTAGGGCTACTTTTTTTCCCTTTGAGTTTCATCCAAGGGGGAATGAGACAGGTTGTAAATGTGTGGGCAGTTGCAGGGAAGGATGCATTTGTTTCATGAGAAATGGTAATAGCTTTCCTTATAGTCAAAGCGGGCTTCTCTTGAAAGGAAAGCCGGTCATTTTTGAATGTGGTCCTGATTGTAGCTGTCCGCCTCATTGTCGGAACCGTGTTACACAACAAGGGCTTAATCATAGGTTGGAAGTGTTTAGATCTTTGGAAACTGGTTGGGGAGTGAGGTCATTTGACCTTATTCAAGCTGGCACATTTATATGCGAGTACAGCGGGGTTGTTCTAACAAGGGAGCAAGCAGAAATTATGACTATGAGTGGTGATTCATTAATATATCCGAATCGTTTTCCGAATAGGTGGACGGAATGGGGTAATTTATCTCTAATAGATGATGGTTATGCGCTTCCTTCGTATCCATCAATTCTTCCTTTGAATTTTGCTCTGGACGTGTCTAGAATGAGGAATGTGGCTTGCTATATAAGTCATAGCTCAACTCCAAATCTGATGGTTCAATTTGTTGTGTATGATCGCAATAATCAATTTTACCTTAAAACTATGCTGTTTGCGATGGAGACCATCCCTCCATTGAGAGATTTCAGCCTTGATTATGGTGTAGATGATGACGTGTTGATTCGCGAGCTCGCAATGCACAATTGA
Protein sequence

>MS.gene31902.t1

MNPRNSNQTFPSAPPSFSLPNPNFNLNLNQSLNLEKPNTTTTTTTPRMAMIPLVRMMDLGLSEKRQMRDVVRRTRMVYDSVRVLAMAEDEGYFNARRVRSDLKASATMRSRGLWLNRNMRIVGAIPGICIGDVFLYRMELCVVGLHGEPQAGIDYLPGSMSSNGDPIATSVIVSGGYEGDVDEGDVIILSGHGGQDKNRRQVFHQKLEGGDLAMERSMHYGIEVRVIRAVRYEGTSLTSGKVYVYDGLYKIVESWCDVGKSGFGVFKFMLSRIDDQAKMGSLVLKEAFLRRNDPDYKPMCIISPDISNGMERVGIRLFNDIDECKDPMYFEYLPRATFFPFEFHPRGNETGCKCVGSCREGCICFMRNGNSFPYSQSGLLLKGKPVIFECGPDCSCPPHCRNRVTQQGLNHRLEVFRSLETGWGVRSFDLIQAGTFICEYSGVVLTREQAEIMTMSGDSLIYPNRFPNRWTEWGNLSLIDDGYALPSYPSILPLNFALDVSRMRNVACYISHSSTPNLMVQFVVYDRNNQFYLKTMLFAMETIPPLRDFSLDYGVDDDVLIRELAMHN