AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32097

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32097.t1 MTR_1g073170 96.094 256 10 0 1 256 1 256 6.48e-168 464
MS.gene32097.t1 MTR_1g045610 62.879 264 89 5 2 264 3 258 3.91e-106 308
MS.gene32097.t1 MTR_1g110460 40.260 231 122 4 16 244 22 238 4.52e-52 172
MS.gene32097.t1 MTR_1g086510 68.571 105 33 0 21 125 22 126 3.91e-51 168
MS.gene32097.t1 MTR_7g035075 67.619 105 34 0 21 125 15 119 1.52e-50 165
MS.gene32097.t1 MTR_6g006030 66.667 105 35 0 21 125 15 119 4.18e-50 164
MS.gene32097.t1 MTR_1g086530 65.714 105 36 0 21 125 34 138 4.38e-50 166
MS.gene32097.t1 MTR_4g063100 66.019 103 35 0 21 123 8 110 3.64e-48 160
MS.gene32097.t1 MTR_5g078140 44.974 189 85 4 21 197 13 194 2.65e-47 160
MS.gene32097.t1 MTR_4g478180 62.037 108 41 0 16 123 9 116 4.13e-47 160
MS.gene32097.t1 MTR_2g096380 59.821 112 45 0 15 126 1 112 1.20e-46 155
MS.gene32097.t1 MTR_3g097450 62.727 110 41 0 14 123 6 115 1.97e-46 157
MS.gene32097.t1 MTR_3g074520 60.000 110 44 0 14 123 6 115 4.28e-46 157
MS.gene32097.t1 MTR_4g102380 66.019 103 35 0 21 123 13 115 7.14e-46 155
MS.gene32097.t1 MTR_7g117730 63.810 105 38 0 22 126 14 118 9.32e-46 154
MS.gene32097.t1 MTR_8g027345 66.667 102 34 0 22 123 14 115 1.02e-45 155
MS.gene32097.t1 MTR_4g125520 62.857 105 39 0 22 126 14 118 5.29e-45 154
MS.gene32097.t1 MTR_4g073420 40.625 192 98 4 14 205 6 181 1.01e-44 152
MS.gene32097.t1 MTR_5g007370 56.481 108 47 0 16 123 8 115 1.68e-44 152
MS.gene32097.t1 MTR_2g033170 67.619 105 34 0 21 125 25 129 2.14e-44 152
MS.gene32097.t1 MTR_1g076150 56.897 116 50 0 21 136 13 128 2.29e-44 150
MS.gene32097.t1 MTR_4g121460 50.000 152 65 2 21 161 13 164 7.19e-44 151
MS.gene32097.t1 MTR_1g085040 60.177 113 45 0 13 125 5 117 7.74e-44 152
MS.gene32097.t1 MTR_7g115650 58.095 105 44 0 21 125 13 117 9.04e-44 147
MS.gene32097.t1 MTR_3g065440 62.857 105 39 0 21 125 13 117 9.46e-44 150
MS.gene32097.t1 MTR_7g011170 64.078 103 37 0 21 123 13 115 1.46e-43 150
MS.gene32097.t1 MTR_7g076740 46.259 147 74 2 21 162 13 159 2.20e-43 149
MS.gene32097.t1 MTR_5g029840 62.136 103 39 0 21 123 13 115 2.20e-43 150
MS.gene32097.t1 MTR_3g083540 63.208 106 39 0 21 126 42 147 2.33e-43 149
MS.gene32097.t1 MTR_5g079670 55.455 110 49 0 14 123 5 114 2.99e-43 146
MS.gene32097.t1 MTR_8g031360 61.538 104 39 1 21 123 14 117 4.78e-43 148
MS.gene32097.t1 MTR_1g062940 38.565 223 120 5 21 237 7 218 4.80e-43 146
MS.gene32097.t1 MTR_8g095390 60.000 110 44 0 14 123 6 115 5.26e-43 149
MS.gene32097.t1 MTR_2g011660 60.194 103 41 0 21 123 14 116 5.51e-43 149
MS.gene32097.t1 MTR_3g052450 60.185 108 43 0 16 123 36 143 6.98e-43 153
MS.gene32097.t1 MTR_1g100653 58.095 105 44 0 21 125 13 117 1.03e-42 147
MS.gene32097.t1 MTR_8g017440 56.757 111 48 0 13 123 5 115 1.27e-42 148
MS.gene32097.t1 MTR_4g082230 62.037 108 41 0 16 123 8 115 1.82e-42 149
MS.gene32097.t1 MTR_2g089620 60.194 103 41 0 21 123 13 115 2.20e-42 147
MS.gene32097.t1 MTR_3g011610 58.261 115 48 0 11 125 28 142 2.25e-42 151
MS.gene32097.t1 MTR_1g112760 60.000 105 42 0 19 123 12 116 3.47e-42 144
MS.gene32097.t1 MTR_7g096930 59.223 103 42 0 21 123 13 115 3.61e-42 145
MS.gene32097.t1 MTR_1g085640 35.200 250 135 3 13 262 5 227 3.74e-42 148
MS.gene32097.t1 MTR_4g123040 64.762 105 37 0 21 125 25 129 4.52e-42 146
MS.gene32097.t1 MTR_2g097910 50.360 139 61 1 21 151 21 159 4.65e-42 146
MS.gene32097.t1 MTR_3g052430 61.165 103 40 0 21 123 42 144 4.97e-42 150
MS.gene32097.t1 MTR_3g077110 47.260 146 75 1 19 162 11 156 6.39e-42 147
MS.gene32097.t1 MTR_2g034790 62.136 103 39 0 21 123 13 115 6.55e-42 146
MS.gene32097.t1 MTR_1g043080 58.252 103 43 0 21 123 13 115 7.67e-42 144
MS.gene32097.t1 MTR_4g091490 59.223 103 42 0 21 123 14 116 9.00e-42 146
MS.gene32097.t1 MTR_1g043050 50.781 128 61 1 21 148 13 138 1.33e-41 143
MS.gene32097.t1 MTR_2g099740 55.856 111 49 0 13 123 5 115 1.95e-41 147
MS.gene32097.t1 MTR_8g042410 60.952 105 41 0 21 125 38 142 2.91e-41 149
MS.gene32097.t1 MTR_8g017540 55.856 111 49 0 13 123 51 161 3.20e-41 146
MS.gene32097.t1 MTR_4g485530 59.804 102 41 0 22 123 14 115 3.21e-41 140
MS.gene32097.t1 MTR_6g055910 52.033 123 59 0 15 137 9 131 3.61e-41 143
MS.gene32097.t1 MTR_4g082290 62.136 103 39 0 21 123 13 115 4.01e-41 146
MS.gene32097.t1 MTR_7g111290 62.500 104 39 0 13 116 5 108 4.02e-41 145
MS.gene32097.t1 MTR_6g012690 61.165 103 40 0 21 123 13 115 6.35e-41 144
MS.gene32097.t1 MTR_8g017500 55.856 111 49 0 13 123 5 115 6.98e-41 144
MS.gene32097.t1 MTR_1g100667 61.538 104 40 0 21 124 14 117 7.09e-41 142
MS.gene32097.t1 MTR_0251s0050 48.592 142 72 1 21 161 14 155 8.60e-41 142
MS.gene32097.t1 MTR_2g064160 53.982 113 52 0 11 123 2 114 1.14e-40 142
MS.gene32097.t1 MTR_0008s0280 58.095 105 44 0 21 125 13 117 1.20e-40 140
MS.gene32097.t1 MTR_3g039990 43.038 158 88 1 21 176 14 171 1.23e-40 142
MS.gene32097.t1 MTR_7g110830 56.637 113 49 0 13 125 5 117 2.11e-40 143
MS.gene32097.t1 MTR_1g021230 59.048 105 43 0 21 125 58 162 3.44e-40 144
MS.gene32097.t1 MTR_0008s0390 59.223 103 42 0 21 123 14 116 4.95e-40 140
MS.gene32097.t1 MTR_7g010210 39.500 200 98 5 21 210 13 199 5.37e-40 140
MS.gene32097.t1 MTR_4g065017 58.559 111 46 0 18 128 15 125 7.01e-40 141
MS.gene32097.t1 MTR_7g010210 39.500 200 98 5 21 210 13 199 7.50e-40 140
MS.gene32097.t1 MTR_2g089450 46.259 147 77 2 21 165 13 159 7.78e-40 139
MS.gene32097.t1 MTR_8g020490 58.333 108 44 1 22 128 10 117 8.18e-40 139
MS.gene32097.t1 MTR_3g028740 54.955 111 50 0 15 125 17 127 1.86e-39 140
MS.gene32097.t1 MTR_2g089420 61.165 103 40 0 21 123 12 114 2.01e-39 142
MS.gene32097.t1 MTR_4g105130 56.757 111 48 0 13 123 5 115 2.33e-39 140
MS.gene32097.t1 MTR_0140s0030 45.033 151 80 1 21 168 14 164 3.54e-39 139
MS.gene32097.t1 MTR_0489s0020 45.033 151 80 1 21 168 14 164 3.54e-39 139
MS.gene32097.t1 MTR_8g098860 53.982 113 52 0 13 125 5 117 5.51e-39 138
MS.gene32097.t1 MTR_8g017340 54.464 112 50 1 13 123 5 116 9.86e-39 141
MS.gene32097.t1 MTR_4g100720 53.153 111 52 0 22 132 15 125 1.07e-38 133
MS.gene32097.t1 MTR_8g017390 54.464 112 50 1 13 123 5 116 1.09e-38 140
MS.gene32097.t1 MTR_1g017000 51.351 111 53 1 14 123 6 116 1.26e-38 135
MS.gene32097.t1 MTR_7g087130 50.400 125 56 1 21 139 13 137 2.99e-38 137
MS.gene32097.t1 MTR_0008s0470 56.311 103 45 0 21 123 14 116 3.50e-38 135
MS.gene32097.t1 MTR_6g009430 44.654 159 73 3 21 164 13 171 4.65e-38 136
MS.gene32097.t1 MTR_8g017350 53.571 112 51 1 13 123 5 116 8.00e-38 140
MS.gene32097.t1 MTR_5g010020 54.717 106 48 0 13 118 5 110 1.29e-37 135
MS.gene32097.t1 MTR_3g461490 54.545 110 50 0 14 123 6 115 1.77e-37 134
MS.gene32097.t1 MTR_0063s0090 40.645 155 87 2 21 170 13 167 2.97e-37 131
MS.gene32097.t1 MTR_7g109320 63.462 104 38 0 21 124 13 116 4.85e-37 134
MS.gene32097.t1 MTR_5g042030 57.282 103 44 0 21 123 8 110 7.98e-37 132
MS.gene32097.t1 MTR_6g012180 57.576 99 42 0 21 119 13 111 1.94e-36 132
MS.gene32097.t1 MTR_4g063100 73.973 73 19 0 51 123 9 81 2.51e-36 129
MS.gene32097.t1 MTR_2g095520 59.596 99 39 1 21 118 13 111 2.63e-36 131
MS.gene32097.t1 MTR_2g088170 61.165 103 40 0 21 123 30 132 2.70e-36 134
MS.gene32097.t1 MTR_5g078910 55.856 111 48 1 15 124 1 111 1.01e-35 129
MS.gene32097.t1 MTR_4g057635 55.769 104 45 1 21 123 13 116 1.18e-35 130
MS.gene32097.t1 MTR_2g067420 56.566 99 43 0 21 119 15 113 1.88e-35 129
MS.gene32097.t1 MTR_0197s0010 36.538 208 114 4 25 218 6 209 4.08e-35 125
MS.gene32097.t1 MTR_3g103570 55.769 104 45 1 21 123 13 116 4.26e-35 129
MS.gene32097.t1 MTR_1g017140 55.769 104 45 1 21 123 13 116 4.63e-35 129
MS.gene32097.t1 MTR_7g102110 54.808 104 46 1 21 123 13 116 7.65e-35 126
MS.gene32097.t1 MTR_1g083630 55.140 107 48 0 19 125 11 117 1.18e-34 131
MS.gene32097.t1 MTR_5g079120 51.667 120 55 2 15 133 55 172 1.40e-34 126
MS.gene32097.t1 MTR_6g090405 50.450 111 54 1 14 123 6 116 1.51e-34 125
MS.gene32097.t1 MTR_5g014990 53.846 104 47 1 21 123 13 116 3.87e-34 125
MS.gene32097.t1 MTR_5g079290 55.340 103 46 0 21 123 18 120 3.97e-34 124
MS.gene32097.t1 MTR_2g096380 68.421 76 24 0 51 126 18 93 4.57e-34 122
MS.gene32097.t1 MTR_5g079220 41.290 155 89 1 21 173 22 176 1.10e-33 123
MS.gene32097.t1 MTR_4g097570 54.639 97 43 1 21 116 13 109 5.25e-33 122
MS.gene32097.t1 MTR_5g088080 36.082 194 104 4 21 202 13 198 7.23e-33 121
MS.gene32097.t1 MTR_5g088150 36.082 194 104 4 21 202 13 198 7.23e-33 121
MS.gene32097.t1 MTR_5g488210 36.082 194 104 4 21 202 13 198 7.23e-33 121
MS.gene32097.t1 MTR_5g088640 33.471 242 129 6 21 238 13 246 9.95e-33 121
MS.gene32097.t1 MTR_8g060940 54.000 100 46 0 21 120 8 107 1.06e-32 120
MS.gene32097.t1 MTR_0001s0360 54.808 104 47 0 21 124 8 111 1.12e-32 120
MS.gene32097.t1 MTR_5g078800 53.153 111 51 1 15 124 1 111 1.32e-32 120
MS.gene32097.t1 MTR_4g128670 54.545 99 44 1 21 118 13 111 1.42e-32 122
MS.gene32097.t1 MTR_8g006470 50.962 104 50 1 16 118 6 109 1.45e-32 120
MS.gene32097.t1 MTR_5g488170 36.082 194 104 4 21 202 13 198 1.65e-32 119
MS.gene32097.t1 MTR_7g017260 45.600 125 66 1 21 143 26 150 2.95e-32 119
MS.gene32097.t1 MTR_5g078930 51.240 121 56 2 14 133 2 120 3.86e-32 118
MS.gene32097.t1 MTR_4g097570 54.082 98 43 2 21 116 13 110 4.17e-32 119
MS.gene32097.t1 MTR_4g029540 41.429 140 74 3 21 158 11 144 2.01e-31 118
MS.gene32097.t1 MTR_0247s0040 52.475 101 48 0 21 121 8 108 2.19e-31 114
MS.gene32097.t1 MTR_5g062790 49.515 103 51 1 21 122 10 112 1.39e-30 116
MS.gene32097.t1 MTR_5g078950 51.485 101 49 0 21 121 8 108 1.55e-30 115
MS.gene32097.t1 MTR_6g055910 56.322 87 38 0 51 137 16 102 2.05e-30 114
MS.gene32097.t1 MTR_5g078860 50.450 111 54 1 15 124 1 111 3.54e-30 115
MS.gene32097.t1 MTR_0193s0090 50.000 102 51 0 21 122 8 109 6.60e-30 112
MS.gene32097.t1 MTR_3g101290 49.038 104 50 2 22 124 37 138 8.89e-30 112
MS.gene32097.t1 MTR_5g088610 48.113 106 54 1 21 125 10 115 3.57e-29 113
MS.gene32097.t1 MTR_5g016510 49.515 103 49 2 22 123 5 105 2.59e-28 110
MS.gene32097.t1 MTR_4g094982 34.211 190 114 3 22 211 5 183 3.78e-28 108
MS.gene32097.t1 MTR_7g111290 70.149 67 20 0 51 117 1 67 6.88e-28 109
MS.gene32097.t1 MTR_4g019370 48.544 103 50 2 22 123 38 138 2.94e-27 108
MS.gene32097.t1 MTR_5g007300 55.263 76 34 0 21 96 65 140 4.28e-27 102
MS.gene32097.t1 MTR_6g015455 39.865 148 80 3 22 162 5 150 1.00e-26 109
MS.gene32097.t1 MTR_5g070020 52.083 96 43 2 22 116 122 215 1.23e-26 106
MS.gene32097.t1 MTR_3g045430 46.602 103 55 0 21 123 14 116 2.27e-26 104
MS.gene32097.t1 MTR_5g049190 50.000 96 45 2 22 116 19 112 7.02e-26 102
MS.gene32097.t1 MTR_5g082910 49.000 100 48 2 22 120 19 116 4.49e-25 101
MS.gene32097.t1 MTR_3g463400 43.089 123 60 4 22 136 133 253 1.14e-24 102
MS.gene32097.t1 MTR_7g061330 48.544 103 50 2 22 123 113 213 1.29e-24 102
MS.gene32097.t1 MTR_7g061330 37.037 108 66 2 19 125 58 164 5.08e-13 68.9
MS.gene32097.t1 MTR_7g461410 48.544 103 50 2 22 123 113 213 1.29e-24 102
MS.gene32097.t1 MTR_7g461410 37.037 108 66 2 19 125 58 164 5.08e-13 68.9
MS.gene32097.t1 MTR_7g061330 48.544 103 50 2 22 123 77 177 1.71e-24 102
MS.gene32097.t1 MTR_7g061330 37.037 108 66 2 19 125 22 128 6.28e-13 68.6
MS.gene32097.t1 MTR_4g128190 34.518 197 102 8 21 212 12 186 4.55e-24 97.4
MS.gene32097.t1 MTR_4g105660 46.296 108 51 3 22 124 180 285 4.95e-24 100
MS.gene32097.t1 MTR_3g110028 44.660 103 54 2 22 123 85 185 4.97e-24 101
MS.gene32097.t1 MTR_3g110028 34.234 111 66 3 19 128 30 134 3.98e-11 63.5
MS.gene32097.t1 MTR_3g077650 46.939 98 49 2 20 116 179 274 5.72e-24 100
MS.gene32097.t1 MTR_1g026870 45.631 103 53 2 22 123 85 185 7.94e-24 100
MS.gene32097.t1 MTR_1g026870 33.981 103 66 2 19 120 30 131 3.73e-11 63.5
MS.gene32097.t1 MTR_7g451170 46.729 107 52 3 22 127 191 293 9.15e-24 99.4
MS.gene32097.t1 MTR_7g037260 46.392 97 51 1 22 118 145 240 1.95e-23 97.8
MS.gene32097.t1 MTR_1g085880 50.000 100 48 2 19 116 10 109 2.39e-23 94.4
MS.gene32097.t1 MTR_5g041570 38.806 134 74 3 9 136 116 247 4.46e-23 97.8
MS.gene32097.t1 MTR_1g085770 48.113 106 53 2 19 122 10 115 8.10e-23 95.5
MS.gene32097.t1 MTR_1g057980 42.718 103 58 1 16 118 74 175 1.23e-22 94.7
MS.gene32097.t1 MTR_7g450950 41.237 97 56 1 22 118 157 252 1.94e-22 94.7
MS.gene32097.t1 MTR_6g074860 44.898 98 51 2 22 118 4 99 2.18e-22 92.8
MS.gene32097.t1 MTR_5g010650 50.000 96 45 2 22 116 110 203 4.84e-22 95.1
MS.gene32097.t1 MTR_4g082040 39.655 116 67 2 22 136 105 218 7.22e-22 94.4
MS.gene32097.t1 MTR_4g088015 44.792 96 50 2 22 116 221 314 3.28e-21 92.4
MS.gene32097.t1 MTR_6g027340 39.796 98 56 2 22 118 16 111 8.95e-21 87.8
MS.gene32097.t1 MTR_7g061550 44.554 101 53 2 25 123 10 109 1.64e-20 89.7
MS.gene32097.t1 MTR_6g027360 37.838 111 65 3 9 118 66 173 2.49e-20 88.6
MS.gene32097.t1 MTR_3g089045 32.683 205 109 7 22 220 16 197 3.56e-20 87.8
MS.gene32097.t1 MTR_7g035350 42.553 94 53 1 25 118 228 320 2.96e-19 87.0
MS.gene32097.t1 MTR_7g037130 39.474 114 65 2 22 132 145 257 3.09e-19 86.3
MS.gene32097.t1 MTR_4g063100 73.913 46 12 0 78 123 1 46 4.25e-19 82.8
MS.gene32097.t1 MTR_7g086960 44.898 98 51 2 22 118 89 184 2.16e-18 84.0
MS.gene32097.t1 MTR_6g027370 37.607 117 63 3 8 123 92 199 2.25e-18 83.6
MS.gene32097.t1 MTR_2g096380 67.347 49 16 0 78 126 1 49 4.97e-18 79.7
MS.gene32097.t1 MTR_8g468380 38.393 112 68 1 25 136 25 135 6.53e-17 80.1
MS.gene32097.t1 MTR_0023s0210 47.368 76 40 0 21 96 8 83 6.60e-17 73.9
MS.gene32097.t1 MTR_5g038910 25.490 204 130 3 25 208 29 230 8.49e-17 79.7
MS.gene32097.t1 MTR_5g038910 25.490 204 130 3 25 208 29 230 1.17e-16 79.3
MS.gene32097.t1 MTR_6g055910 48.333 60 31 0 78 137 2 61 4.56e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32097.t1 AT3G24310 54.864 257 105 5 17 264 15 269 2.17e-81 246
MS.gene32097.t1 AT4G13480 50.370 270 105 5 15 264 1 261 2.77e-81 245
MS.gene32097.t1 AT3G30210 51.364 220 86 5 21 239 28 227 2.16e-61 195
MS.gene32097.t1 AT1G48000 71.429 105 30 0 21 125 33 137 1.08e-51 169
MS.gene32097.t1 AT3G27810 61.864 118 44 1 21 138 21 137 2.33e-50 165
MS.gene32097.t1 AT5G59780 63.964 111 40 0 15 125 3 113 3.52e-50 165
MS.gene32097.t1 AT3G46130 64.286 112 40 0 14 125 3 114 4.51e-50 165
MS.gene32097.t1 AT5G40350 67.647 102 33 0 21 122 18 119 2.36e-49 162
MS.gene32097.t1 AT3G01530 60.526 114 45 0 16 129 21 134 2.16e-48 159
MS.gene32097.t1 AT2G47190 61.261 111 43 0 16 126 16 126 2.46e-48 161
MS.gene32097.t1 AT1G68320 58.537 123 47 1 21 139 20 142 3.60e-48 161
MS.gene32097.t1 AT1G25340 62.857 105 39 0 21 125 19 123 9.06e-47 157
MS.gene32097.t1 AT2G16720 52.482 141 65 1 14 154 6 144 5.63e-46 155
MS.gene32097.t1 AT3G53200 62.617 107 40 0 17 123 6 112 9.03e-46 154
MS.gene32097.t1 AT4G34990 44.624 186 77 3 14 176 6 188 2.36e-45 154
MS.gene32097.t1 AT1G22640 60.909 110 43 0 14 123 6 115 4.97e-45 152
MS.gene32097.t1 AT1G06180 56.780 118 51 0 21 138 13 130 5.91e-45 152
MS.gene32097.t1 AT4G09460 38.835 206 110 3 14 219 6 195 6.52e-45 151
MS.gene32097.t1 AT5G26660 61.062 113 44 0 13 125 5 117 1.08e-44 154
MS.gene32097.t1 AT5G49620 66.964 112 37 0 14 125 20 131 1.43e-44 152
MS.gene32097.t1 AT1G35515 60.177 113 45 0 14 126 6 118 1.57e-44 149
MS.gene32097.t1 AT5G16770 58.182 110 46 0 14 123 6 115 2.39e-44 152
MS.gene32097.t1 AT5G16770 58.182 110 46 0 14 123 6 115 2.39e-44 152
MS.gene32097.t1 AT5G14750 58.491 106 44 0 18 123 14 119 2.52e-44 149
MS.gene32097.t1 AT5G10280 58.182 110 46 0 14 123 6 115 3.22e-44 152
MS.gene32097.t1 AT4G38620 58.407 113 47 0 14 126 6 118 3.60e-44 151
MS.gene32097.t1 AT3G06490 67.619 105 34 0 21 125 20 124 3.60e-44 152
MS.gene32097.t1 AT5G16770 58.182 110 46 0 14 123 6 115 4.17e-44 152
MS.gene32097.t1 AT5G16770 58.182 110 46 0 14 123 6 115 4.17e-44 152
MS.gene32097.t1 AT4G28110 59.223 103 42 0 21 123 13 115 6.34e-44 150
MS.gene32097.t1 AT5G65230 60.185 108 43 0 16 123 8 115 6.59e-44 151
MS.gene32097.t1 AT5G54230 62.136 103 39 0 21 123 13 115 7.85e-44 151
MS.gene32097.t1 AT3G13540 63.107 103 38 0 21 123 24 126 1.06e-43 149
MS.gene32097.t1 AT2G32460 58.772 114 47 0 10 123 8 121 1.26e-43 154
MS.gene32097.t1 AT4G21440 58.333 108 45 0 16 123 8 115 1.37e-43 151
MS.gene32097.t1 AT5G07690 63.725 102 37 0 21 122 13 114 1.58e-43 150
MS.gene32097.t1 AT4G12350 63.107 103 38 0 21 123 13 115 1.62e-43 149
MS.gene32097.t1 AT5G40330 56.481 108 47 0 16 123 8 115 1.75e-43 147
MS.gene32097.t1 AT1G18570 50.704 142 69 1 21 161 14 155 1.95e-43 151
MS.gene32097.t1 AT3G02940 58.182 110 46 0 14 123 6 115 2.08e-43 149
MS.gene32097.t1 AT4G05100 60.194 103 41 0 21 123 14 116 2.53e-43 150
MS.gene32097.t1 AT3G61250 60.194 103 41 0 21 123 13 115 3.62e-43 149
MS.gene32097.t1 AT3G02940 58.182 110 46 0 14 123 6 115 3.89e-43 149
MS.gene32097.t1 AT3G02940 58.182 110 46 0 14 123 6 115 3.89e-43 149
MS.gene32097.t1 AT5G07700 62.136 103 39 0 21 123 13 115 4.34e-43 149
MS.gene32097.t1 AT5G07700 62.136 103 39 0 21 123 13 115 4.34e-43 149
MS.gene32097.t1 AT3G01140 64.078 103 37 0 21 123 13 115 4.47e-43 150
MS.gene32097.t1 AT1G66230 47.552 143 74 1 21 162 13 155 4.63e-43 148
MS.gene32097.t1 AT2G31180 55.556 117 51 1 21 136 13 129 5.29e-43 147
MS.gene32097.t1 AT3G11440 62.136 103 39 0 21 123 42 144 5.64e-43 152
MS.gene32097.t1 AT5G61420 62.136 103 39 0 21 123 13 115 5.67e-43 150
MS.gene32097.t1 AT5G15310 63.107 103 38 0 21 123 13 115 5.85e-43 147
MS.gene32097.t1 AT1G34670 58.182 110 46 0 14 123 6 115 6.86e-43 150
MS.gene32097.t1 AT4G22680 62.136 103 39 0 21 123 13 115 7.53e-43 147
MS.gene32097.t1 AT3G01140 64.078 103 37 0 21 123 56 158 1.01e-42 150
MS.gene32097.t1 AT5G15310 63.107 103 38 0 21 123 13 115 1.35e-42 148
MS.gene32097.t1 AT1G09540 51.471 136 62 1 13 144 5 140 1.38e-42 149
MS.gene32097.t1 AT5G15310 63.107 103 38 0 21 123 13 115 1.45e-42 147
MS.gene32097.t1 AT1G57560 59.459 111 45 0 13 123 5 115 1.56e-42 146
MS.gene32097.t1 AT2G32460 60.952 105 41 0 21 125 7 111 1.87e-42 151
MS.gene32097.t1 AT1G57560 59.459 111 45 0 13 123 5 115 2.10e-42 147
MS.gene32097.t1 AT5G06100 62.136 103 39 0 21 123 33 135 2.55e-42 150
MS.gene32097.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.42e-42 151
MS.gene32097.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.42e-42 151
MS.gene32097.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.42e-42 151
MS.gene32097.t1 AT5G60890 58.182 110 46 0 16 125 8 117 3.73e-42 146
MS.gene32097.t1 AT3G27920 53.782 119 55 0 16 134 10 128 3.75e-42 144
MS.gene32097.t1 AT5G16600 46.154 169 71 3 21 169 13 181 4.22e-42 147
MS.gene32097.t1 AT1G25340 60.000 105 37 1 21 125 19 118 5.05e-42 145
MS.gene32097.t1 AT3G47600 58.036 112 47 0 21 132 13 124 6.18e-42 146
MS.gene32097.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene32097.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene32097.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene32097.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene32097.t1 AT1G25340 54.472 123 47 2 21 139 19 136 1.04e-41 145
MS.gene32097.t1 AT4G01680 58.407 113 47 0 13 125 5 117 1.90e-41 142
MS.gene32097.t1 AT3G62610 60.194 103 41 0 21 123 13 115 2.87e-41 145
MS.gene32097.t1 AT1G74080 62.745 102 38 0 21 122 13 114 3.13e-41 144
MS.gene32097.t1 AT5G62470 56.637 113 49 0 21 133 13 125 3.84e-41 145
MS.gene32097.t1 AT2G26960 62.136 103 39 0 20 122 20 122 4.90e-41 146
MS.gene32097.t1 AT3G13890 54.955 111 50 0 13 123 5 115 5.17e-41 144
MS.gene32097.t1 AT4G01680 49.306 144 69 1 13 152 5 148 5.17e-41 144
MS.gene32097.t1 AT5G62320 59.091 110 38 1 21 123 14 123 5.84e-41 141
MS.gene32097.t1 AT3G23250 40.678 177 93 2 21 197 13 177 6.29e-41 142
MS.gene32097.t1 AT5G49620 59.524 126 37 1 14 125 20 145 8.34e-41 143
MS.gene32097.t1 AT5G49330 61.165 103 40 0 21 123 13 115 1.03e-40 143
MS.gene32097.t1 AT4G17785 61.165 103 40 0 21 123 14 116 1.05e-40 144
MS.gene32097.t1 AT4G17785 61.165 103 40 0 21 123 14 116 1.53e-40 143
MS.gene32097.t1 AT2G47460 58.491 106 44 0 21 126 13 118 2.13e-40 143
MS.gene32097.t1 AT1G08810 53.279 122 56 1 21 142 13 133 5.99e-40 140
MS.gene32097.t1 AT5G52600 58.252 103 43 0 21 123 13 115 6.35e-40 137
MS.gene32097.t1 AT1G74650 60.194 103 41 0 21 123 13 115 1.26e-39 140
MS.gene32097.t1 AT1G79180 53.509 114 53 0 21 134 15 128 1.51e-39 139
MS.gene32097.t1 AT3G12720 55.340 103 46 0 21 123 23 125 1.60e-39 139
MS.gene32097.t1 AT1G56160 52.727 110 52 0 14 123 8 117 1.65e-39 139
MS.gene32097.t1 AT1G63910 53.043 115 54 0 13 127 5 119 2.45e-39 140
MS.gene32097.t1 AT5G12870 53.390 118 55 0 13 130 11 128 2.55e-39 138
MS.gene32097.t1 AT3G08500 57.944 107 45 0 19 125 29 135 3.17e-39 139
MS.gene32097.t1 AT5G55020 59.804 102 41 0 21 122 27 128 3.56e-39 143
MS.gene32097.t1 AT3G48920 58.491 106 44 0 17 122 15 120 6.36e-39 137
MS.gene32097.t1 AT5G62470 55.752 113 49 1 21 133 13 124 1.11e-38 138
MS.gene32097.t1 AT1G74430 53.448 116 52 1 8 123 2 115 1.24e-38 136
MS.gene32097.t1 AT4G25560 57.547 106 45 0 18 123 8 113 1.67e-38 136
MS.gene32097.t1 AT1G16490 55.340 103 46 0 21 123 15 117 2.22e-38 135
MS.gene32097.t1 AT3G28910 58.252 103 43 0 21 123 13 115 3.05e-38 136
MS.gene32097.t1 AT5G35550 56.863 102 44 0 22 123 16 117 3.43e-38 135
MS.gene32097.t1 AT3G13890 50.833 120 50 1 13 123 5 124 4.85e-38 137
MS.gene32097.t1 AT4G01680 45.513 156 69 2 13 152 5 160 6.38e-38 136
MS.gene32097.t1 AT4G26930 57.843 102 43 0 21 122 20 121 8.86e-38 137
MS.gene32097.t1 AT5G14340 58.491 106 44 0 21 126 25 130 1.18e-37 134
MS.gene32097.t1 AT3G12820 50.862 116 57 0 8 123 2 117 1.53e-37 132
MS.gene32097.t1 AT5G56110 56.481 108 47 0 16 123 8 115 2.22e-37 134
MS.gene32097.t1 AT3G28470 58.163 98 41 0 21 118 13 110 2.62e-37 134
MS.gene32097.t1 AT5G52260 58.095 105 44 0 19 123 11 115 6.77e-37 131
MS.gene32097.t1 AT4G37780 56.731 104 44 1 21 123 13 116 1.89e-36 131
MS.gene32097.t1 AT3G46130 74.324 74 19 0 52 125 9 82 1.55e-35 127
MS.gene32097.t1 AT5G59780 64.835 91 28 1 35 125 6 92 1.77e-35 126
MS.gene32097.t1 AT3G46130 65.169 89 27 1 37 125 8 92 2.72e-35 126
MS.gene32097.t1 AT5G23000 52.252 111 52 1 14 123 6 116 4.16e-35 128
MS.gene32097.t1 AT5G65790 43.114 167 79 4 21 185 13 165 5.72e-35 129
MS.gene32097.t1 AT1G66370 45.324 139 56 2 21 139 9 147 1.35e-34 125
MS.gene32097.t1 AT3G27810 62.791 86 31 1 53 138 4 88 2.15e-34 122
MS.gene32097.t1 AT3G49690 54.206 107 48 1 21 126 13 119 4.14e-34 125
MS.gene32097.t1 AT5G57620 54.808 104 46 1 21 123 13 116 5.18e-34 125
MS.gene32097.t1 AT3G53200 73.239 71 19 0 53 123 9 79 8.56e-34 122
MS.gene32097.t1 AT2G36890 54.808 104 46 1 21 123 13 116 9.81e-34 124
MS.gene32097.t1 AT1G18710 49.138 116 57 1 8 123 2 115 1.26e-33 123
MS.gene32097.t1 AT2G36890 54.808 104 46 1 21 123 54 157 2.08e-33 124
MS.gene32097.t1 AT1G79180 39.610 154 60 1 14 134 8 161 3.63e-33 123
MS.gene32097.t1 AT5G40350 70.000 70 21 0 53 122 5 74 1.13e-32 117
MS.gene32097.t1 AT1G66380 55.340 103 46 0 21 123 9 111 1.59e-31 114
MS.gene32097.t1 AT1G56650 55.340 103 46 0 21 123 9 111 2.02e-31 117
MS.gene32097.t1 AT3G60460 50.485 103 50 1 21 122 12 114 6.44e-31 117
MS.gene32097.t1 AT5G26660 69.863 73 22 0 53 125 14 86 6.94e-31 117
MS.gene32097.t1 AT1G66390 55.340 103 46 0 21 123 9 111 9.95e-31 115
MS.gene32097.t1 AT2G26950 51.546 97 47 0 20 116 16 112 1.95e-30 117
MS.gene32097.t1 AT3G47600 61.250 80 31 0 53 132 39 118 3.35e-28 110
MS.gene32097.t1 AT3G27785 54.167 96 41 2 22 116 189 282 9.60e-28 110
MS.gene32097.t1 AT2G23290 48.696 115 55 3 10 123 2 113 1.21e-27 108
MS.gene32097.t1 AT4G37260 49.515 103 49 2 22 123 13 113 1.71e-27 108
MS.gene32097.t1 AT5G14750 46.154 104 36 1 56 139 18 121 2.58e-27 103
MS.gene32097.t1 AT3G12820 64.706 68 24 0 56 123 2 69 4.84e-27 103
MS.gene32097.t1 AT2G39880 49.038 104 50 2 22 124 50 151 7.11e-27 107
MS.gene32097.t1 AT5G58850 48.696 115 51 3 22 130 105 217 9.01e-27 108
MS.gene32097.t1 AT5G35550 57.895 76 32 0 48 123 45 120 4.94e-26 103
MS.gene32097.t1 AT5G02320 48.544 103 50 2 22 123 127 227 7.87e-26 106
MS.gene32097.t1 AT5G02320 37.864 103 62 2 19 120 72 173 5.40e-13 68.9
MS.gene32097.t1 AT5G02320 48.544 103 50 2 22 123 127 227 7.87e-26 106
MS.gene32097.t1 AT5G02320 37.864 103 62 2 19 120 72 173 5.40e-13 68.9
MS.gene32097.t1 AT3G09230 47.573 103 51 2 22 123 55 155 8.68e-26 104
MS.gene32097.t1 AT5G02320 48.544 103 50 2 22 123 67 167 9.13e-26 105
MS.gene32097.t1 AT5G02320 37.864 103 62 2 19 120 12 113 6.30e-13 68.6
MS.gene32097.t1 AT5G11510 35.526 152 89 4 22 172 81 224 2.66e-25 105
MS.gene32097.t1 AT5G11510 34.951 103 65 2 19 120 26 127 7.29e-12 65.5
MS.gene32097.t1 AT3G09370 46.667 105 53 2 22 125 135 237 2.71e-25 104
MS.gene32097.t1 AT3G09370 36.893 103 63 2 19 120 80 181 1.12e-11 64.7
MS.gene32097.t1 AT5G11510 35.526 152 89 4 22 172 81 224 2.87e-25 105
MS.gene32097.t1 AT5G11510 34.951 103 65 2 19 120 26 127 7.71e-12 65.5
MS.gene32097.t1 AT5G11510 35.526 152 89 4 22 172 81 224 2.88e-25 105
MS.gene32097.t1 AT5G11510 34.951 103 65 2 19 120 26 127 7.99e-12 65.5
MS.gene32097.t1 AT5G11510 35.526 152 89 4 22 172 81 224 2.88e-25 105
MS.gene32097.t1 AT5G11510 34.951 103 65 2 19 120 26 127 7.99e-12 65.5
MS.gene32097.t1 AT5G11510 35.526 152 89 4 22 172 81 224 2.88e-25 105
MS.gene32097.t1 AT5G11510 34.951 103 65 2 19 120 26 127 7.99e-12 65.5
MS.gene32097.t1 AT3G09370 46.667 105 53 2 22 125 130 232 2.97e-25 104
MS.gene32097.t1 AT3G09370 36.893 103 63 2 19 120 75 176 1.29e-11 64.7
MS.gene32097.t1 AT3G09370 46.667 105 53 2 22 125 143 245 3.65e-25 104
MS.gene32097.t1 AT3G09370 36.893 103 63 2 19 120 88 189 1.09e-11 65.1
MS.gene32097.t1 AT5G11050 44.628 121 59 3 22 136 105 223 5.34e-25 103
MS.gene32097.t1 AT4G18770 44.340 106 56 2 12 116 207 310 7.09e-25 102
MS.gene32097.t1 AT3G55730 45.631 103 53 2 22 123 56 156 8.62e-25 102
MS.gene32097.t1 AT3G50060 44.660 103 54 2 22 123 6 106 4.23e-24 99.0
MS.gene32097.t1 AT5G67300 45.631 103 53 2 22 123 6 106 1.48e-23 97.4
MS.gene32097.t1 AT1G26780 40.678 118 67 2 22 138 98 213 2.21e-23 96.3
MS.gene32097.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene32097.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.34e-12 66.6
MS.gene32097.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene32097.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.34e-12 66.6
MS.gene32097.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene32097.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.34e-12 66.6
MS.gene32097.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene32097.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.34e-12 66.6
MS.gene32097.t1 AT4G32730 44.660 103 54 2 22 123 87 187 3.03e-23 99.4
MS.gene32097.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.38e-12 66.6
MS.gene32097.t1 AT1G26780 40.678 118 67 2 22 138 98 213 3.90e-23 97.1
MS.gene32097.t1 AT1G17950 41.880 117 59 3 22 137 5 113 5.88e-23 94.7
MS.gene32097.t1 AT5G40360 45.263 95 51 1 22 116 158 251 8.45e-23 96.3
MS.gene32097.t1 AT1G69560 40.000 115 66 2 22 135 107 219 1.62e-22 95.1
MS.gene32097.t1 AT1G69560 40.000 115 66 2 22 135 123 235 1.76e-22 95.1
MS.gene32097.t1 AT1G73410 43.519 108 58 2 22 128 6 111 1.89e-21 90.5
MS.gene32097.t1 AT1G73410 43.519 108 58 2 22 128 6 111 2.08e-21 89.4
MS.gene32097.t1 AT1G22640 63.793 58 21 0 66 123 1 58 2.66e-21 89.0
MS.gene32097.t1 AT5G17800 43.269 104 58 1 22 125 93 195 2.88e-21 91.7
MS.gene32097.t1 AT1G66380 54.545 77 35 0 47 123 2 78 9.38e-21 85.1
MS.gene32097.t1 AT3G29020 39.091 110 64 2 22 130 65 172 2.11e-20 87.4
MS.gene32097.t1 AT3G23250 62.069 58 22 0 66 123 1 58 2.96e-20 87.0
MS.gene32097.t1 AT5G59780 75.000 48 12 0 78 125 1 48 3.60e-20 85.1
MS.gene32097.t1 AT5G14750 43.617 94 33 2 66 139 1 94 4.22e-20 84.3
MS.gene32097.t1 AT5G14750 43.617 94 33 2 66 139 1 94 4.22e-20 84.3
MS.gene32097.t1 AT4G33450 45.833 96 49 2 22 116 19 112 5.77e-20 86.7
MS.gene32097.t1 AT3G29020 39.091 110 64 2 22 130 67 174 7.23e-20 87.4
MS.gene32097.t1 AT3G46130 75.000 48 12 0 78 125 1 48 7.84e-20 85.1
MS.gene32097.t1 AT2G25230 43.158 95 51 2 25 118 29 121 5.22e-19 83.6
MS.gene32097.t1 AT1G71030 47.500 80 41 1 44 123 5 83 1.21e-18 81.6
MS.gene32097.t1 AT1G71030 53.846 65 30 0 59 123 5 69 1.30e-18 81.3
MS.gene32097.t1 AT2G37630 41.584 101 56 2 25 123 7 106 1.57e-18 84.3
MS.gene32097.t1 AT4G00540 45.283 106 52 3 22 123 103 206 3.66e-18 83.6
MS.gene32097.t1 AT4G00540 45.283 106 52 3 22 123 101 204 5.41e-18 83.2
MS.gene32097.t1 AT1G66380 48.750 80 41 0 21 100 9 88 9.31e-18 77.0
MS.gene32097.t1 AT1G18960 39.216 102 59 2 22 123 10 108 1.73e-17 80.9
MS.gene32097.t1 AT1G14350 37.255 102 63 1 25 126 28 128 3.28e-16 78.2
MS.gene32097.t1 AT1G14350 37.255 102 63 1 25 126 28 128 3.28e-16 78.2
MS.gene32097.t1 AT2G02820 35.185 108 69 1 25 132 33 139 4.99e-16 77.0
MS.gene32097.t1 AT2G02820 36.937 111 63 2 25 132 33 139 7.84e-16 77.0
MS.gene32097.t1 AT2G02820 36.937 111 63 2 25 132 33 139 9.09e-16 77.0
MS.gene32097.t1 AT5G39700 35.714 126 76 2 21 146 55 175 2.62e-15 72.8
MS.gene32097.t1 AT5G40430 39.048 105 59 4 25 128 57 157 1.23e-14 72.0
MS.gene32097.t1 AT4G25560 63.043 46 17 0 78 123 2 47 5.29e-14 69.7
MS.gene32097.t1 AT3G18100 33.333 123 72 3 2 117 360 479 2.47e-12 67.0
MS.gene32097.t1 AT3G18100 33.333 123 72 3 2 117 308 427 2.81e-12 66.6
MS.gene32097.t1 AT3G18100 33.333 123 72 3 2 117 521 640 2.88e-12 67.0
MS.gene32097.t1 AT3G18100 33.333 123 72 3 2 117 473 592 3.26e-12 66.6
MS.gene32097.t1 AT5G61420 74.286 35 9 0 89 123 2 36 3.57e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTAAGGTCTGGTCTT+AGG 0.259563 1.2:+55790951 None:intergenic
ATTTCTTTCAATATGTATTC+AGG 0.268017 1.2:-55791297 None:intergenic
GTGGGATGGACTTTGGAAAT+TGG 0.273045 1.2:-55790330 MS.gene32097:CDS
ATCTCATTGTCTGTTCTTCC+CGG 0.288896 1.2:+55790707 None:intergenic
AACTCTGTCTCTAGGCTTGC+AGG 0.297134 1.2:-55791150 MS.gene32097:intron
GTGTTATCTGACCCTTCTTA+AGG 0.320325 1.2:+55790939 None:intergenic
AGAATTTGTGGGATGGACTT+TGG 0.355393 1.2:-55790337 MS.gene32097:CDS
TTTGCAGGACTGAGAAGAAA+TGG 0.356634 1.2:-55791004 MS.gene32097:intron
TGGAAATTGGATGATGCTCT+TGG 0.365011 1.2:-55790317 MS.gene32097:CDS
GTGTAATGGAAGAAGATAGA+TGG 0.371974 1.2:-55791248 MS.gene32097:CDS
ATCTGACCCTTCTTAAGGTC+TGG 0.379207 1.2:+55790944 None:intergenic
AACAATTGCGAGAAGCTTGC+CGG 0.379879 1.2:-55790726 MS.gene32097:CDS
CCCCTCTGATGCTGCTGAAA+AGG 0.386654 1.2:-55790642 MS.gene32097:CDS
TGCAGATACACAAGAACAAC+AGG 0.393427 1.2:-55790426 MS.gene32097:CDS
ACAATGAGATAAAGAACTAT+TGG 0.426441 1.2:-55790694 MS.gene32097:CDS
TCTATGCTCAATGATAATAA+TGG 0.431042 1.2:-55790392 MS.gene32097:CDS
TACATGCTAGGTGGGGAAAC+AGG 0.437338 1.2:-55790889 MS.gene32097:intron
TTCTCAAGAGACACAAGAAA+TGG 0.446329 1.2:-55790459 MS.gene32097:CDS
ACTACATTGTGCACATTGGC+TGG 0.456615 1.2:+55790263 None:intergenic
TTGCAGGACTGAGAAGAAAT+GGG 0.458286 1.2:-55791003 MS.gene32097:intron
CTTCAAATGAAGAGAATTTG+TGG 0.464547 1.2:-55790349 MS.gene32097:CDS
CAATATGTATTCAGGAATGA+TGG 0.474198 1.2:-55791289 None:intergenic
TTCTTGTGTATCTGCATACA+TGG 0.489097 1.2:+55790433 None:intergenic
TGTGTCTCTTGAGAAGTAGA+AGG 0.496024 1.2:+55790467 None:intergenic
CCTAGAGCTACATGCTAGGT+GGG 0.498599 1.2:-55790897 MS.gene32097:CDS
ACAATTGCGAGAAGCTTGCC+GGG 0.500170 1.2:-55790725 MS.gene32097:CDS
AGCTGCATGGTGAAGGCAGA+TGG 0.509674 1.2:-55791173 MS.gene32097:CDS
AATACAACATGGACATGAAA+GGG 0.511886 1.2:-55790535 MS.gene32097:CDS
ATGAGATAAAGAACTATTGG+AGG 0.513857 1.2:-55790691 MS.gene32097:CDS
TTCAAATGAAGAGAATTTGT+GGG 0.514100 1.2:-55790348 MS.gene32097:CDS
CGAAAATTCGTTCTTTCAAG+AGG 0.514766 1.2:-55790619 MS.gene32097:CDS
CCCACCTAGCATGTAGCTCT+AGG 0.519377 1.2:+55790897 None:intergenic
CAATACAACATGGACATGAA+AGG 0.522848 1.2:-55790536 MS.gene32097:CDS
CCTAAGACCAGACCTTAAGA+AGG 0.523078 1.2:-55790951 MS.gene32097:CDS
TATGTCAAGCTGCATGGTGA+AGG 0.550639 1.2:-55791180 MS.gene32097:CDS
GCAGATGGAACTCTGTCTCT+AGG 0.556467 1.2:-55791158 MS.gene32097:CDS
ATAGATGGAGGAAAGGACCT+TGG 0.564310 1.2:-55791233 MS.gene32097:CDS
GAAGAAGATAGATGGAGGAA+AGG 0.569212 1.2:-55791240 MS.gene32097:CDS
GGAAAAGTTGTAGACTGAGA+TGG 0.570618 1.2:-55790982 MS.gene32097:CDS
GGAATGATGGAAGGAAACAC+TGG 0.575742 1.2:-55791276 MS.gene32097:CDS
AATGAAGAGAATTTGTGGGA+TGG 0.584872 1.2:-55790344 MS.gene32097:CDS
AAACACTGGATGGAGTGTAA+TGG 0.585481 1.2:-55791262 MS.gene32097:CDS
GAAAAGTTGTAGACTGAGAT+GGG 0.586925 1.2:-55790981 MS.gene32097:CDS
GAAAGGACCTTGGACTTCTG+AGG 0.594052 1.2:-55791223 MS.gene32097:CDS
GATCATAGACTTGTTGCTTG+AGG 0.595685 1.2:-55790513 MS.gene32097:CDS
ATCGAGTATGTCAAGCTGCA+TGG 0.599795 1.2:-55791186 MS.gene32097:CDS
TAATGGAAGAAGATAGATGG+AGG 0.601607 1.2:-55791245 MS.gene32097:CDS
ATGTATTCAGGAATGATGGA+AGG 0.607186 1.2:-55791285 MS.gene32097:CDS
TTGTCTTCCTCAGAAGTCCA+AGG 0.607855 1.2:+55791216 None:intergenic
TGATGGAAGGAAACACTGGA+TGG 0.616620 1.2:-55791272 MS.gene32097:CDS
TCCTAGAGCTACATGCTAGG+TGG 0.619467 1.2:-55790898 MS.gene32097:CDS
TAATCCTAGAGCTACATGCT+AGG 0.625705 1.2:-55790901 MS.gene32097:CDS
CTAAGACCAGACCTTAAGAA+GGG 0.632926 1.2:-55790950 MS.gene32097:CDS
AGTAACTACATTGTGCACAT+TGG 0.642977 1.2:+55790259 None:intergenic
CTAGAGCTACATGCTAGGTG+GGG 0.652296 1.2:-55790896 MS.gene32097:CDS
ACAACAACTTCAATACAACA+TGG 0.686703 1.2:-55790546 MS.gene32097:CDS
GCAGATACACAAGAACAACA+GGG 0.788670 1.2:-55790425 MS.gene32097:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATATATGATCAATA+AGG + chr1.2:55790510-55790529 None:intergenic 10.0%
!! AATTGGTATTAATTAAACTA+AGG + chr1.2:55790475-55790494 None:intergenic 15.0%
!! TACTAAATAAAAAACATTTC+AGG - chr1.2:55790778-55790797 MS.gene32097:intron 15.0%
!! ACAAAAATGTGTATAAAGTT+TGG + chr1.2:55790424-55790443 None:intergenic 20.0%
!! TAAATAAAAAACATTTCAGG+TGG - chr1.2:55790781-55790800 MS.gene32097:intron 20.0%
!!! TGATCATATATTATTTTTGC+AGG - chr1.2:55790513-55790532 MS.gene32097:CDS 20.0%
! ACAATGAGATAAAGAACTAT+TGG - chr1.2:55790838-55790857 MS.gene32097:intron 25.0%
! TAAGGAGTTAAGAATTCAAT+TGG + chr1.2:55790492-55790511 None:intergenic 25.0%
! TCTATGCTCAATGATAATAA+TGG - chr1.2:55791140-55791159 MS.gene32097:intron 25.0%
! TTCAAATGAAGAGAATTTGT+GGG - chr1.2:55791184-55791203 MS.gene32097:CDS 25.0%
AATACAACATGGACATGAAA+GGG - chr1.2:55790997-55791016 MS.gene32097:CDS 30.0%
ACAACAACTTCAATACAACA+TGG - chr1.2:55790986-55791005 MS.gene32097:CDS 30.0%
ATGAGATAAAGAACTATTGG+AGG - chr1.2:55790841-55790860 MS.gene32097:intron 30.0%
CTTCAAATGAAGAGAATTTG+TGG - chr1.2:55791183-55791202 MS.gene32097:CDS 30.0%
! AACTAAGGTACAAAGTACTA+TGG + chr1.2:55790460-55790479 None:intergenic 30.0%
AATGAAGAGAATTTGTGGGA+TGG - chr1.2:55791188-55791207 MS.gene32097:CDS 35.0%
AGTAACTACATTGTGCACAT+TGG + chr1.2:55791276-55791295 None:intergenic 35.0%
CAATACAACATGGACATGAA+AGG - chr1.2:55790996-55791015 MS.gene32097:CDS 35.0%
CGAAAATTCGTTCTTTCAAG+AGG - chr1.2:55790913-55790932 MS.gene32097:CDS 35.0%
GAAAAGTTGTAGACTGAGAT+GGG - chr1.2:55790551-55790570 MS.gene32097:CDS 35.0%
TAATGGAAGAAGATAGATGG+AGG - chr1.2:55790287-55790306 MS.gene32097:CDS 35.0%
TTCTCAAGAGACACAAGAAA+TGG - chr1.2:55791073-55791092 MS.gene32097:intron 35.0%
TTCTTGTGTATCTGCATACA+TGG + chr1.2:55791102-55791121 None:intergenic 35.0%
! ATGTATTCAGGAATGATGGA+AGG - chr1.2:55790247-55790266 MS.gene32097:CDS 35.0%
! GTGTAATGGAAGAAGATAGA+TGG - chr1.2:55790284-55790303 MS.gene32097:CDS 35.0%
AAACACTGGATGGAGTGTAA+TGG - chr1.2:55790270-55790289 MS.gene32097:CDS 40.0%
AAGTGTCACGTGTCTAATAC+TGG + chr1.2:55790706-55790725 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+CGG + chr1.2:55790828-55790847 None:intergenic 40.0%
CTAAGACCAGACCTTAAGAA+GGG - chr1.2:55790582-55790601 MS.gene32097:CDS 40.0%
CTGGAAACGCGTAATTTCAA+CGG + chr1.2:55790687-55790706 None:intergenic 40.0%
GAAGAAGATAGATGGAGGAA+AGG - chr1.2:55790292-55790311 MS.gene32097:CDS 40.0%
GCAGATACACAAGAACAACA+GGG - chr1.2:55791107-55791126 MS.gene32097:intron 40.0%
GGAAAAGTTGTAGACTGAGA+TGG - chr1.2:55790550-55790569 MS.gene32097:CDS 40.0%
GTGTTATCTGACCCTTCTTA+AGG + chr1.2:55790596-55790615 None:intergenic 40.0%
TAATCCTAGAGCTACATGCT+AGG - chr1.2:55790631-55790650 MS.gene32097:CDS 40.0%
TGCAGATACACAAGAACAAC+AGG - chr1.2:55791106-55791125 MS.gene32097:intron 40.0%
TGGAAATTGGATGATGCTCT+TGG - chr1.2:55791215-55791234 MS.gene32097:CDS 40.0%
TGTGTCTCTTGAGAAGTAGA+AGG + chr1.2:55791068-55791087 None:intergenic 40.0%
TTGCAGGACTGAGAAGAAAT+GGG - chr1.2:55790529-55790548 MS.gene32097:CDS 40.0%
TTTGCAGGACTGAGAAGAAA+TGG - chr1.2:55790528-55790547 MS.gene32097:CDS 40.0%
! AGAATTTGTGGGATGGACTT+TGG - chr1.2:55791195-55791214 MS.gene32097:CDS 40.0%
!! GATCATAGACTTGTTGCTTG+AGG - chr1.2:55791019-55791038 MS.gene32097:intron 40.0%
AACAATTGCGAGAAGCTTGC+CGG - chr1.2:55790806-55790825 MS.gene32097:intron 45.0%
ACTACATTGTGCACATTGGC+TGG + chr1.2:55791272-55791291 None:intergenic 45.0%
ATAGATGGAGGAAAGGACCT+TGG - chr1.2:55790299-55790318 MS.gene32097:CDS 45.0%
ATCGAGTATGTCAAGCTGCA+TGG - chr1.2:55790346-55790365 MS.gene32097:CDS 45.0%
ATCTGACCCTTCTTAAGGTC+TGG + chr1.2:55790591-55790610 None:intergenic 45.0%
CCTAAGACCAGACCTTAAGA+AGG - chr1.2:55790581-55790600 MS.gene32097:CDS 45.0%
TATGTCAAGCTGCATGGTGA+AGG - chr1.2:55790352-55790371 MS.gene32097:CDS 45.0%
TGATGGAAGGAAACACTGGA+TGG - chr1.2:55790260-55790279 MS.gene32097:CDS 45.0%
TTGTCTTCCTCAGAAGTCCA+AGG + chr1.2:55790319-55790338 None:intergenic 45.0%
! CCTTCTTAAGGTCTGGTCTT+AGG + chr1.2:55790584-55790603 None:intergenic 45.0%
! GGAATGATGGAAGGAAACAC+TGG - chr1.2:55790256-55790275 MS.gene32097:CDS 45.0%
! GTGGGATGGACTTTGGAAAT+TGG - chr1.2:55791202-55791221 MS.gene32097:CDS 45.0%
AACTCTGTCTCTAGGCTTGC+AGG - chr1.2:55790382-55790401 MS.gene32097:CDS 50.0%
ACAATTGCGAGAAGCTTGCC+GGG - chr1.2:55790807-55790826 MS.gene32097:intron 50.0%
CCTAGAGCTACATGCTAGGT+GGG - chr1.2:55790635-55790654 MS.gene32097:CDS 50.0%
CTAGAGCTACATGCTAGGTG+GGG - chr1.2:55790636-55790655 MS.gene32097:CDS 50.0%
GAAAGGACCTTGGACTTCTG+AGG - chr1.2:55790309-55790328 MS.gene32097:CDS 50.0%
GCAGATGGAACTCTGTCTCT+AGG - chr1.2:55790374-55790393 MS.gene32097:CDS 50.0%
TACATGCTAGGTGGGGAAAC+AGG - chr1.2:55790643-55790662 MS.gene32097:CDS 50.0%
TCCTAGAGCTACATGCTAGG+TGG - chr1.2:55790634-55790653 MS.gene32097:CDS 50.0%
! AGCAGCATCAGAGGGGTTTT+TGG + chr1.2:55790886-55790905 None:intergenic 50.0%
! CCTTTTCAGCAGCATCAGAG+GGG + chr1.2:55790893-55790912 None:intergenic 50.0%
! GCCTTTTCAGCAGCATCAGA+GGG + chr1.2:55790894-55790913 None:intergenic 50.0%
ACCCGTGTCACAACGCAACA+CGG + chr1.2:55790738-55790757 None:intergenic 55.0%
ACCCGTGTTGCGTTGTGACA+CGG - chr1.2:55790733-55790752 MS.gene32097:CDS 55.0%
AGCTGCATGGTGAAGGCAGA+TGG - chr1.2:55790359-55790378 MS.gene32097:CDS 55.0%
CCCACCTAGCATGTAGCTCT+AGG + chr1.2:55790638-55790657 None:intergenic 55.0%
CCCCTCTGATGCTGCTGAAA+AGG - chr1.2:55790890-55790909 MS.gene32097:CDS 55.0%
! CGCCTTTTCAGCAGCATCAG+AGG + chr1.2:55790895-55790914 None:intergenic 55.0%
CCCGTGTCACAACGCAACAC+GGG + chr1.2:55790737-55790756 None:intergenic 60.0%
CCCGTGTTGCGTTGTGACAC+GGG - chr1.2:55790734-55790753 MS.gene32097:CDS 60.0%
GTCACAACGCAACACGGGTC+TGG + chr1.2:55790732-55790751 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 55790247 55791307 55790247 ID=MS.gene32097
chr1.2 mRNA 55790247 55791307 55790247 ID=MS.gene32097.t1;Parent=MS.gene32097
chr1.2 exon 55791151 55791307 55791151 ID=MS.gene32097.t1.exon1;Parent=MS.gene32097.t1
chr1.2 CDS 55791151 55791307 55791151 ID=cds.MS.gene32097.t1;Parent=MS.gene32097.t1
chr1.2 exon 55790890 55791019 55790890 ID=MS.gene32097.t1.exon2;Parent=MS.gene32097.t1
chr1.2 CDS 55790890 55791019 55790890 ID=cds.MS.gene32097.t1;Parent=MS.gene32097.t1
chr1.2 exon 55790247 55790754 55790247 ID=MS.gene32097.t1.exon3;Parent=MS.gene32097.t1
chr1.2 CDS 55790247 55790754 55790247 ID=cds.MS.gene32097.t1;Parent=MS.gene32097.t1
Gene Sequence

>MS.gene32097

ATGTATTCAGGAATGATGGAAGGAAACACTGGATGGAGTGTAATGGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGAGGAAGACAAATTACTCATCGAGTATGTCAAGCTGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGTACATATATGATACAACCAAACTTTATACACATTTTTGTATTTTAATTTCGACCATAGTACTTTGTACCTTAGTTTAATTAATACCAATTGAATTCTTAACTCCTTATTGATCATATATTATTTTTGCAGGACTGAGAAGAAATGGGAAAAGTTGTAGACTGAGATGGGTGAACTACCTAAGACCAGACCTTAAGAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTACAAATTTGAACTATGTCCGTTGAAATTACGCGTTTCCAGTATTAGACACGTGACACTTTATCCAGACCCGTGTTGCGTTGTGACACGGGTTAATGCTTCTAGTTGATTATTACTAAATAAAAAACATTTCAGGTGGTCAACAATTGCGAGAAGCTTGCCGGGAAGAACAGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGACCAAAAACCCCTCTGATGCTGCTGAAAAGGCGAAAATTCGTTCTTTCAAGAGGCAGCAACGACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTTCAATACAACATGGACATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACTATACTAGTGTGCCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATGTATGCAGATACACAAGAACAACAGGGTTGCTTTTACTCTATGCTCAATGATAATAATGGTAATGTCTATGCACAAGAGTCTTCAAATGAAGAGAATTTGTGGGATGGACTTTGGAAATTGGATGATGCTCTTGGAAATTCAATGCAGCTAATGCTACAAGCAAAGCCAGCCAATGTGCACAATGTAGTTACTCCCTTTTGTTAA
Protein sequence

>MS.gene32097.t1

MYSGMMEGNTGWSVMEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKNPSDAAEKAKIRSFKRQQRQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYYTSVPSTSQETQEMVSMYADTQEQQGCFYSMLNDNNGNVYAQESSNEENLWDGLWKLDDALGNSMQLMLQAKPANVHNVVTPFC