AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32173

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32173.t1 MTR_4g089135 95.690 348 10 3 1 347 1 344 0.0 680
MS.gene32173.t1 MTR_2g080010 52.520 377 123 11 1 346 1 352 1.35e-118 347
MS.gene32173.t1 MTR_2157s0010 54.826 259 88 6 13 260 6 246 1.90e-87 264
MS.gene32173.t1 MTR_7g085220 63.492 189 44 2 10 191 3 173 1.89e-84 259
MS.gene32173.t1 MTR_7g100990 51.639 244 95 4 14 255 10 232 4.19e-79 245
MS.gene32173.t1 MTR_2g093810 63.636 176 46 2 15 190 14 171 8.93e-78 241
MS.gene32173.t1 MTR_5g041940 62.500 176 46 2 14 189 2 157 1.35e-77 239
MS.gene32173.t1 MTR_3g088110 66.292 178 36 3 14 190 6 160 1.07e-76 238
MS.gene32173.t1 MTR_4g081870 62.857 175 45 2 15 189 9 163 1.69e-76 236
MS.gene32173.t1 MTR_2g079990 64.835 182 40 4 15 196 16 173 1.09e-74 234
MS.gene32173.t1 MTR_2g079990 62.963 189 60 4 15 196 16 201 2.56e-74 234
MS.gene32173.t1 MTR_8g094580 58.824 204 58 6 14 213 6 187 2.25e-73 229
MS.gene32173.t1 MTR_8g059170 64.835 182 42 4 15 196 14 173 2.88e-73 230
MS.gene32173.t1 MTR_3g096920 59.788 189 46 4 14 195 6 171 3.74e-70 221
MS.gene32173.t1 MTR_3g096920 54.589 207 65 5 14 195 6 208 3.08e-65 209
MS.gene32173.t1 MTR_5g040420 43.830 235 113 4 15 245 14 233 1.10e-62 205
MS.gene32173.t1 MTR_6g011860 52.688 186 70 4 15 198 15 184 1.21e-61 202
MS.gene32173.t1 MTR_8g467490 50.857 175 73 1 17 191 16 177 2.19e-61 201
MS.gene32173.t1 MTR_7g005280 54.237 177 54 3 14 190 14 163 4.60e-58 189
MS.gene32173.t1 MTR_2g078700 50.847 177 67 1 14 190 22 178 1.37e-57 191
MS.gene32173.t1 MTR_6g084430 49.724 181 65 3 15 195 5 159 4.98e-56 186
MS.gene32173.t1 MTR_4g108760 48.295 176 69 2 15 190 17 170 1.14e-54 183
MS.gene32173.t1 MTR_2g064090 50.000 176 63 5 15 188 6 158 1.22e-54 182
MS.gene32173.t1 MTR_3g109340 49.432 176 66 2 15 190 22 174 3.47e-54 182
MS.gene32173.t1 MTR_3g109340 48.876 178 63 2 15 190 22 173 6.34e-54 181
MS.gene32173.t1 MTR_3g435150 49.432 176 67 2 15 190 16 169 1.69e-53 178
MS.gene32173.t1 MTR_5g012080 43.578 218 87 7 14 224 6 194 8.06e-53 178
MS.gene32173.t1 MTR_1g008740 48.315 178 62 3 15 188 13 164 1.14e-52 177
MS.gene32173.t1 MTR_1g008740 48.315 178 62 3 15 188 27 178 1.43e-52 177
MS.gene32173.t1 MTR_6g012670 40.773 233 101 5 14 234 19 226 1.64e-52 176
MS.gene32173.t1 MTR_4g134460 47.090 189 72 4 12 197 51 214 2.53e-52 179
MS.gene32173.t1 MTR_3g064580 46.445 211 81 6 15 223 6 186 2.66e-52 183
MS.gene32173.t1 MTR_6g032770 48.000 175 71 2 15 189 18 172 6.09e-52 176
MS.gene32173.t1 MTR_4g036030 42.056 214 92 5 14 221 6 193 1.48e-51 174
MS.gene32173.t1 MTR_3g070030 46.893 177 73 3 15 191 19 174 1.48e-51 175
MS.gene32173.t1 MTR_1g069805 46.023 176 69 2 15 190 10 159 2.58e-51 172
MS.gene32173.t1 MTR_5g076850 48.454 194 71 5 15 206 6 172 3.90e-51 180
MS.gene32173.t1 MTR_6g477900 47.429 175 66 3 15 187 6 156 5.00e-51 170
MS.gene32173.t1 MTR_5g090970 47.126 174 74 3 17 187 20 178 5.98e-51 172
MS.gene32173.t1 MTR_2g062730 44.134 179 72 3 15 190 10 163 1.88e-50 172
MS.gene32173.t1 MTR_7g085260 42.194 237 90 7 15 225 17 232 2.37e-50 172
MS.gene32173.t1 MTR_5g021710 43.590 195 74 5 1 192 1 162 2.72e-50 171
MS.gene32173.t1 MTR_5g090970 47.126 174 73 4 17 187 20 177 1.26e-49 168
MS.gene32173.t1 MTR_7g097090 46.784 171 65 2 15 185 10 154 1.43e-49 168
MS.gene32173.t1 MTR_5g014300 53.425 146 61 2 15 153 6 151 2.20e-49 169
MS.gene32173.t1 MTR_4g101680 43.005 193 77 4 14 203 6 168 2.69e-49 169
MS.gene32173.t1 MTR_2g068880 47.340 188 81 5 17 197 24 200 8.12e-49 166
MS.gene32173.t1 MTR_4g035590 42.233 206 89 4 15 217 8 186 9.02e-49 167
MS.gene32173.t1 MTR_8g076110 44.693 179 70 4 15 190 6 158 9.08e-49 166
MS.gene32173.t1 MTR_2g068920 43.458 214 100 6 17 227 23 218 1.28e-48 165
MS.gene32173.t1 MTR_1g096430 44.041 193 74 5 5 194 2 163 1.73e-48 166
MS.gene32173.t1 MTR_4g098630 54.676 139 60 2 15 150 6 144 1.04e-47 164
MS.gene32173.t1 MTR_8g024480 42.246 187 90 5 6 189 6 177 1.17e-47 166
MS.gene32173.t1 MTR_2g064470 43.158 190 83 3 15 204 11 175 2.77e-47 162
MS.gene32173.t1 MTR_3g116070 56.589 129 55 1 15 142 23 151 2.83e-47 164
MS.gene32173.t1 MTR_8g099750 47.458 177 74 4 14 190 13 170 3.43e-47 159
MS.gene32173.t1 MTR_7g011130 45.930 172 84 2 18 189 22 184 3.71e-47 163
MS.gene32173.t1 MTR_7g011120 44.633 177 79 4 15 189 8 167 1.04e-45 158
MS.gene32173.t1 MTR_3g098810 46.629 178 75 3 15 190 14 173 7.93e-45 154
MS.gene32173.t1 MTR_1g090720 45.763 177 76 3 15 189 42 200 1.82e-44 159
MS.gene32173.t1 MTR_4g075980 41.711 187 80 4 5 190 6 164 5.67e-44 153
MS.gene32173.t1 MTR_8g094580 53.896 154 45 6 64 213 2 133 1.13e-43 150
MS.gene32173.t1 MTR_3g096140 43.429 175 73 4 15 187 7 157 5.04e-43 150
MS.gene32173.t1 MTR_5g069030 46.369 179 70 4 15 191 25 179 7.53e-43 157
MS.gene32173.t1 MTR_3g098810 56.061 132 54 2 15 144 14 143 9.32e-43 146
MS.gene32173.t1 MTR_1g097300 53.435 131 57 2 17 145 21 149 1.10e-42 155
MS.gene32173.t1 MTR_3g096140 44.000 175 72 5 15 187 7 157 3.01e-42 150
MS.gene32173.t1 MTR_1g090723 44.068 177 72 4 17 190 10 162 2.46e-41 153
MS.gene32173.t1 MTR_0036s0150 46.067 178 66 6 17 190 7 158 5.02e-41 150
MS.gene32173.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 8.28e-41 151
MS.gene32173.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 9.20e-41 151
MS.gene32173.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 3.20e-40 149
MS.gene32173.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 3.66e-40 149
MS.gene32173.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 9.37e-40 147
MS.gene32173.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 1.12e-39 148
MS.gene32173.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.52e-39 143
MS.gene32173.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.67e-39 145
MS.gene32173.t1 MTR_3g093040 41.341 179 79 4 15 191 108 262 3.02e-39 141
MS.gene32173.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 3.46e-39 144
MS.gene32173.t1 MTR_8g023840 50.725 138 63 4 11 144 6 142 2.28e-38 141
MS.gene32173.t1 MTR_4g094302 39.884 173 80 2 15 187 11 159 1.64e-37 133
MS.gene32173.t1 MTR_3g070040 40.000 175 74 4 19 189 12 159 2.62e-37 137
MS.gene32173.t1 MTR_4g094302 48.438 128 58 1 15 142 11 130 3.83e-37 131
MS.gene32173.t1 MTR_8g093580 48.485 132 64 2 13 142 4 133 4.22e-37 139
MS.gene32173.t1 MTR_4g052620 38.942 208 96 7 15 213 5 190 1.18e-35 130
MS.gene32173.t1 MTR_8g023860 46.923 130 65 3 14 140 11 139 6.48e-34 129
MS.gene32173.t1 MTR_8g023930 37.981 208 91 7 15 219 24 196 7.38e-34 130
MS.gene32173.t1 MTR_2g086690 36.681 229 108 9 16 229 5 211 9.95e-33 122
MS.gene32173.t1 MTR_8g023900 45.714 140 67 4 13 144 186 324 1.14e-32 127
MS.gene32173.t1 MTR_8g023900 35.882 170 105 3 12 178 9 177 3.60e-31 122
MS.gene32173.t1 MTR_3g096140 40.625 160 69 5 30 187 1 136 1.43e-32 124
MS.gene32173.t1 MTR_7g105170 36.111 180 91 5 15 188 4 165 6.09e-31 118
MS.gene32173.t1 MTR_8g093790 39.306 173 61 6 15 187 10 138 6.73e-27 105
MS.gene32173.t1 MTR_7g070140 47.748 111 54 1 68 174 17 127 1.82e-26 102
MS.gene32173.t1 MTR_8g023880 35.897 195 76 7 15 192 7 169 1.26e-25 103
MS.gene32173.t1 MTR_3g096400 36.000 175 88 8 15 186 7 160 4.90e-23 95.5
MS.gene32173.t1 MTR_7g083370 36.620 142 80 7 13 151 8 142 1.19e-19 84.3
MS.gene32173.t1 MTR_7g083330 35.294 136 82 4 15 148 18 149 3.12e-19 84.7
MS.gene32173.t1 MTR_7g083360 34.074 135 83 4 15 147 10 140 3.80e-19 83.6
MS.gene32173.t1 MTR_1g087190 62.500 48 15 2 17 62 7 53 1.29e-12 62.4
MS.gene32173.t1 MTR_7g070150 31.897 116 47 3 106 214 1 91 4.41e-12 62.0
MS.gene32173.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.79e-11 65.5
MS.gene32173.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.79e-11 65.5
MS.gene32173.t1 MTR_4g078875 34.211 152 76 8 13 145 46 192 2.44e-11 63.9
MS.gene32173.t1 MTR_8g069160 29.114 158 93 6 1 142 54 208 9.21e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32173.t1 AT1G61110 54.848 361 110 13 1 347 1 322 2.72e-111 327
MS.gene32173.t1 AT3G15510 50.515 388 123 13 1 346 1 361 2.63e-103 308
MS.gene32173.t1 AT3G04070 64.362 188 63 2 8 191 3 190 6.70e-84 258
MS.gene32173.t1 AT1G52880 74.432 176 29 2 19 192 21 182 2.35e-82 253
MS.gene32173.t1 AT3G04070 63.102 187 51 3 8 191 3 174 2.91e-80 248
MS.gene32173.t1 AT1G69490 63.687 179 45 3 15 193 9 167 1.96e-79 244
MS.gene32173.t1 AT1G01720 65.169 178 41 3 14 191 6 162 3.30e-75 234
MS.gene32173.t1 AT5G08790 56.621 219 71 4 14 231 6 201 6.17e-75 233
MS.gene32173.t1 AT4G27410 64.972 177 38 4 15 191 14 166 6.74e-75 233
MS.gene32173.t1 AT1G52890 64.972 177 38 4 15 191 14 166 2.92e-74 232
MS.gene32173.t1 AT3G15500 59.204 201 47 4 15 215 14 179 5.06e-74 232
MS.gene32173.t1 AT1G77450 64.571 175 38 3 14 187 9 160 5.48e-74 229
MS.gene32173.t1 AT5G63790 55.300 217 67 4 14 229 49 236 1.61e-73 230
MS.gene32173.t1 AT5G63790 55.300 217 67 4 14 229 59 246 2.08e-73 230
MS.gene32173.t1 AT4G27410 59.278 194 38 5 15 191 14 183 1.32e-70 223
MS.gene32173.t1 AT5G39820 52.432 185 79 4 17 197 22 201 8.64e-64 206
MS.gene32173.t1 AT1G26870 51.397 179 74 2 15 193 16 181 5.55e-61 201
MS.gene32173.t1 AT5G39610 48.936 188 73 3 12 198 17 182 3.97e-58 190
MS.gene32173.t1 AT5G18270 47.030 202 86 2 15 216 21 201 5.33e-58 191
MS.gene32173.t1 AT5G13180 54.802 177 54 3 14 190 13 163 8.60e-58 188
MS.gene32173.t1 AT5G53950 50.000 176 68 1 14 189 16 171 3.28e-57 190
MS.gene32173.t1 AT5G18270 46.040 202 88 2 15 216 21 201 4.47e-57 189
MS.gene32173.t1 AT3G18400 50.000 178 64 3 14 191 4 156 2.29e-56 186
MS.gene32173.t1 AT1G76420 48.851 174 66 2 15 188 22 172 4.62e-56 186
MS.gene32173.t1 AT2G24430 49.718 177 66 2 15 191 16 169 8.01e-56 185
MS.gene32173.t1 AT2G24430 49.718 177 66 2 15 191 16 169 8.01e-56 185
MS.gene32173.t1 AT5G61430 50.000 174 65 2 15 188 16 167 2.37e-55 184
MS.gene32173.t1 AT3G15170 48.000 175 71 1 15 189 20 174 5.77e-55 182
MS.gene32173.t1 AT5G07680 50.000 174 65 2 15 188 3 154 8.46e-55 182
MS.gene32173.t1 AT3G29035 57.746 142 58 1 15 156 24 163 9.78e-55 182
MS.gene32173.t1 AT5G07680 50.000 174 65 2 15 188 17 168 1.08e-54 182
MS.gene32173.t1 AT3G04060 49.438 178 69 2 15 192 20 176 2.13e-54 182
MS.gene32173.t1 AT3G03200 48.087 183 70 4 15 195 6 165 1.59e-53 183
MS.gene32173.t1 AT2G33480 50.273 183 56 5 14 192 14 165 3.63e-53 176
MS.gene32173.t1 AT2G02450 60.317 126 49 1 17 142 53 177 1.72e-52 178
MS.gene32173.t1 AT2G33480 49.727 183 59 5 14 192 14 167 2.11e-52 174
MS.gene32173.t1 AT2G02450 60.317 126 49 1 17 142 53 177 2.19e-52 179
MS.gene32173.t1 AT5G17260 46.114 193 75 5 15 205 6 171 5.82e-51 176
MS.gene32173.t1 AT4G36160 45.789 190 69 6 1 187 1 159 7.81e-51 174
MS.gene32173.t1 AT4G36160 45.789 190 69 6 1 187 1 159 7.81e-51 174
MS.gene32173.t1 AT4G36160 45.789 190 69 6 1 187 5 163 8.23e-51 174
MS.gene32173.t1 AT1G65910 41.410 227 95 6 15 239 6 196 8.41e-51 179
MS.gene32173.t1 AT1G12260 46.893 177 65 4 14 187 6 156 8.91e-51 172
MS.gene32173.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.13e-50 173
MS.gene32173.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.13e-50 173
MS.gene32173.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.13e-50 173
MS.gene32173.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.13e-50 173
MS.gene32173.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.13e-50 173
MS.gene32173.t1 AT1G12260 46.893 177 65 4 14 187 6 156 1.15e-50 174
MS.gene32173.t1 AT5G62380 46.354 192 69 6 14 198 6 170 2.25e-50 171
MS.gene32173.t1 AT5G62380 46.354 192 69 6 14 198 6 170 2.25e-50 171
MS.gene32173.t1 AT5G46590 56.738 141 53 3 7 145 3 137 4.86e-50 169
MS.gene32173.t1 AT5G46590 56.738 141 53 3 7 145 3 137 6.02e-50 169
MS.gene32173.t1 AT2G18060 45.355 183 67 5 8 187 6 158 8.10e-50 171
MS.gene32173.t1 AT2G18060 45.355 183 67 5 8 187 6 158 8.10e-50 171
MS.gene32173.t1 AT2G43000 46.409 181 74 4 17 197 20 177 1.52e-49 167
MS.gene32173.t1 AT4G17980 48.087 183 68 5 7 187 3 160 2.10e-49 167
MS.gene32173.t1 AT5G66300 44.175 206 79 7 8 206 9 185 2.49e-49 167
MS.gene32173.t1 AT4G17980 48.087 183 68 5 7 187 3 160 2.82e-49 166
MS.gene32173.t1 AT3G17730 46.286 175 68 4 15 187 6 156 2.87e-49 166
MS.gene32173.t1 AT1G71930 41.063 207 91 4 15 218 9 187 3.27e-49 168
MS.gene32173.t1 AT1G71930 41.063 207 91 4 15 218 9 187 3.27e-49 168
MS.gene32173.t1 AT1G56010 42.408 191 88 4 15 204 19 188 1.26e-48 166
MS.gene32173.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.87e-48 168
MS.gene32173.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.87e-48 168
MS.gene32173.t1 AT4G10350 46.067 178 69 4 15 189 9 162 2.18e-48 166
MS.gene32173.t1 AT3G10480 46.032 189 76 4 3 189 15 179 3.35e-48 168
MS.gene32173.t1 AT3G12977 44.509 173 73 3 15 187 18 167 3.38e-48 164
MS.gene32173.t1 AT1G33280 46.067 178 66 4 15 189 8 158 4.14e-48 164
MS.gene32173.t1 AT3G10480 46.032 189 77 4 3 189 15 180 5.19e-48 168
MS.gene32173.t1 AT1G54330 47.429 175 63 4 15 187 6 153 3.12e-47 162
MS.gene32173.t1 AT3G61910 38.426 216 107 5 14 215 10 213 4.46e-47 162
MS.gene32173.t1 AT3G10490 44.444 189 80 4 3 189 15 180 5.08e-47 159
MS.gene32173.t1 AT1G32770 42.697 178 85 3 15 189 16 179 5.25e-47 163
MS.gene32173.t1 AT2G46770 41.146 192 99 4 1 189 2 182 1.39e-46 162
MS.gene32173.t1 AT1G32510 40.094 212 97 4 15 218 6 195 1.79e-46 159
MS.gene32173.t1 AT4G28530 42.564 195 70 3 15 193 10 178 1.84e-46 161
MS.gene32173.t1 AT3G10500 45.506 178 71 3 15 190 9 162 3.46e-46 165
MS.gene32173.t1 AT3G10490 44.444 189 80 4 3 189 15 180 1.90e-45 161
MS.gene32173.t1 AT3G12910 48.045 179 77 6 17 191 23 189 1.20e-44 155
MS.gene32173.t1 AT5G04410 45.506 178 71 4 15 190 9 162 3.33e-44 160
MS.gene32173.t1 AT1G34180 51.389 144 66 2 1 142 2 143 6.05e-44 157
MS.gene32173.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.50e-43 159
MS.gene32173.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.65e-43 159
MS.gene32173.t1 AT1G34180 51.389 144 66 2 1 142 2 143 2.94e-43 157
MS.gene32173.t1 AT1G34190 53.435 131 57 2 17 145 18 146 4.43e-43 157
MS.gene32173.t1 AT2G17040 39.234 209 96 4 17 224 8 186 5.45e-43 150
MS.gene32173.t1 AT3G10480 39.189 222 77 4 3 189 15 213 9.63e-43 155
MS.gene32173.t1 AT1G34180 47.436 156 66 2 1 142 2 155 2.98e-42 153
MS.gene32173.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.00e-42 154
MS.gene32173.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.62e-42 154
MS.gene32173.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.81e-42 153
MS.gene32173.t1 AT2G27300 51.181 127 59 2 15 140 14 138 1.65e-41 148
MS.gene32173.t1 AT1G34180 47.436 156 66 2 1 142 2 155 1.86e-41 152
MS.gene32173.t1 AT5G24590 55.039 129 55 2 15 141 13 140 1.94e-41 150
MS.gene32173.t1 AT3G49530 51.128 133 62 2 15 145 13 144 1.18e-40 147
MS.gene32173.t1 AT3G49530 51.128 133 62 2 15 145 13 144 2.13e-40 148
MS.gene32173.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.45e-40 148
MS.gene32173.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.45e-40 148
MS.gene32173.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.45e-40 148
MS.gene32173.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.45e-40 148
MS.gene32173.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.45e-40 148
MS.gene32173.t1 AT5G64060 41.143 175 77 4 15 187 6 156 1.30e-39 143
MS.gene32173.t1 AT5G64530 41.808 177 83 3 15 191 3 159 6.65e-39 137
MS.gene32173.t1 AT3G44290 46.875 128 65 2 17 143 16 141 1.90e-37 134
MS.gene32173.t1 AT5G22290 43.165 139 76 2 3 140 9 145 4.00e-37 136
MS.gene32173.t1 AT1G32870 47.191 178 68 4 15 190 10 163 9.31e-37 139
MS.gene32173.t1 AT1G32870 47.191 178 68 4 15 190 10 163 9.66e-37 139
MS.gene32173.t1 AT3G44290 46.875 128 65 2 17 143 16 141 9.67e-37 135
MS.gene32173.t1 AT1G32870 47.191 178 68 4 15 190 46 199 1.69e-36 139
MS.gene32173.t1 AT5G64530 49.219 128 53 2 15 142 3 118 1.39e-35 127
MS.gene32173.t1 AT5G04395 39.610 154 79 2 3 142 16 169 4.73e-34 124
MS.gene32173.t1 AT5G61430 47.200 125 44 2 64 188 2 104 1.62e-32 122
MS.gene32173.t1 AT3G44350 35.160 219 103 9 14 222 4 193 7.36e-32 120
MS.gene32173.t1 AT1G56010 41.135 141 62 3 64 204 2 121 7.61e-31 117
MS.gene32173.t1 AT3G04420 44.186 129 66 3 16 140 4 130 2.00e-29 115
MS.gene32173.t1 AT3G04420 44.186 129 66 3 16 140 4 130 4.60e-29 115
MS.gene32173.t1 AT3G12977 44.355 124 46 3 64 187 14 114 4.92e-29 112
MS.gene32173.t1 AT3G44350 40.876 137 71 4 14 143 4 137 5.06e-29 110
MS.gene32173.t1 AT5G22380 36.667 180 87 6 18 191 8 166 1.31e-28 111
MS.gene32173.t1 AT4G01550 44.186 129 68 3 18 142 7 135 2.08e-28 115
MS.gene32173.t1 AT4G28530 45.312 128 54 1 15 126 10 137 2.23e-28 112
MS.gene32173.t1 AT2G33480 45.736 129 40 4 68 192 8 110 1.22e-27 108
MS.gene32173.t1 AT4G10350 45.902 122 42 3 68 189 18 115 1.74e-27 109
MS.gene32173.t1 AT1G02230 42.308 130 67 4 16 140 4 130 2.11e-27 110
MS.gene32173.t1 AT4G01520 42.029 138 75 4 16 148 5 142 6.58e-25 102
MS.gene32173.t1 AT4G01540 43.846 130 68 4 18 142 7 136 2.96e-24 103
MS.gene32173.t1 AT4G01540 43.846 130 68 4 18 142 7 136 3.78e-24 102
MS.gene32173.t1 AT1G02250 41.538 130 68 4 16 140 4 130 4.85e-24 101
MS.gene32173.t1 AT4G01540 43.846 130 68 4 18 142 7 136 5.74e-24 102
MS.gene32173.t1 AT4G01540 43.846 130 68 4 18 142 7 136 7.46e-24 102
MS.gene32173.t1 AT1G02220 40.310 129 68 4 16 140 4 127 1.29e-22 98.2
MS.gene32173.t1 AT5G14000 36.923 130 76 3 15 142 15 140 2.11e-20 87.0
MS.gene32173.t1 AT5G14000 36.923 130 76 3 15 142 15 140 4.30e-20 87.4
MS.gene32173.t1 AT1G01010 38.060 134 69 6 18 140 6 136 2.77e-19 89.0
MS.gene32173.t1 AT2G43000 41.322 121 48 4 77 197 2 99 2.88e-19 85.1
MS.gene32173.t1 AT3G55210 32.124 193 89 8 15 193 11 175 1.34e-16 79.3
MS.gene32173.t1 AT3G56530 35.659 129 78 3 15 140 52 178 1.42e-16 79.7
MS.gene32173.t1 AT5G50820 33.835 133 78 4 14 144 16 140 2.01e-16 77.0
MS.gene32173.t1 AT3G10490 39.216 102 39 3 88 189 2 80 3.19e-15 76.3
MS.gene32173.t1 AT3G10490 39.216 102 39 3 88 189 2 80 3.19e-15 76.3
MS.gene32173.t1 AT2G18060 38.947 95 32 3 93 187 2 70 2.08e-14 72.8
MS.gene32173.t1 AT3G04430 36.364 132 70 5 21 140 6 135 1.57e-13 68.9
MS.gene32173.t1 AT1G28470 31.973 147 79 7 13 142 75 217 8.30e-13 68.6
MS.gene32173.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.21e-12 68.2
MS.gene32173.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.58e-12 67.8
MS.gene32173.t1 AT5G14490 30.435 161 86 7 5 145 48 202 3.14e-12 67.4
MS.gene32173.t1 AT5G14490 30.435 161 86 7 5 145 45 199 3.33e-12 67.0
MS.gene32173.t1 AT1G25580 34.266 143 75 7 13 142 56 192 3.47e-12 67.8
MS.gene32173.t1 AT5G14490 30.435 161 86 7 5 145 48 202 3.54e-12 67.4
MS.gene32173.t1 AT5G56620 31.613 155 76 6 15 142 43 194 4.30e-12 67.0
MS.gene32173.t1 AT4G29230 34.416 154 74 8 15 144 48 198 4.47e-12 67.4
MS.gene32173.t1 AT4G29230 34.416 154 74 8 15 144 47 197 4.50e-12 67.4
MS.gene32173.t1 AT5G14490 30.435 161 86 7 5 145 45 199 5.56e-12 65.9
MS.gene32173.t1 AT4G29230 34.416 154 74 8 15 144 48 198 8.94e-12 66.2

Find 79 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTCCGGACATAAAT+TGG 0.154420 4.4:-23091141 MS.gene32173:CDS
TTTCATCAAAATTCAATTCT+TGG 0.173199 4.4:-23091196 MS.gene32173:CDS
CCCAATAGGGCTGCTACTTC+TGG 0.200373 4.4:-23092200 MS.gene32173:CDS
CATGCCAAGGCCGCTCTTAA+TGG 0.229078 4.4:-23091581 MS.gene32173:CDS
TTTATAGGTAAAGCAAGTTT+TGG 0.250824 4.4:-23092281 MS.gene32173:intron
CAAAAGGAGTTAAAACTAAT+TGG 0.262200 4.4:-23092076 MS.gene32173:CDS
GAATTCTTCTTGTTATTGTT+TGG 0.278889 4.4:+23091963 None:intergenic
CTATTGGGTCTTGCTCCATT+TGG 0.292483 4.4:+23092215 None:intergenic
CCCAGAAGTAGCAGCCCTAT+TGG 0.308982 4.4:+23092199 None:intergenic
TAAATGCATCATCACAGTTT+TGG 0.311946 4.4:-23091354 MS.gene32173:CDS
TATTGGGTCTTGCTCCATTT+GGG 0.322648 4.4:+23092216 None:intergenic
GCATTTAGTGCACGTTTCAT+AGG 0.337891 4.4:+23091370 None:intergenic
AATTCAATTCTTGGATCTGT+TGG 0.346734 4.4:-23091187 MS.gene32173:CDS
TCTTCAAGCAAACGGTTTCA+TGG 0.349803 4.4:-23091304 MS.gene32173:CDS
TGATCCATTAAGAGCGGCCT+TGG 0.390914 4.4:+23091577 None:intergenic
ATCGGAAACCTGGTGGTAGG+TGG 0.399421 4.4:+23092573 None:intergenic
TTCTTCTTGTTATTGTTTGG+AGG 0.403734 4.4:+23091966 None:intergenic
TCTTCAAGAAGCACAAGTTA+TGG 0.409732 4.4:-23091505 MS.gene32173:CDS
TTCCCATCAGATGTTAATAT+AGG 0.417975 4.4:+23092149 None:intergenic
AATGATCACGGAATGCAAAA+TGG 0.418422 4.4:-23091442 MS.gene32173:CDS
CCAGAAGTAGCAGCCCTATT+GGG 0.428179 4.4:+23092200 None:intergenic
CTTCATCGGTGGGGTGGAAT+CGG 0.437306 4.4:+23092555 None:intergenic
TTCGTACTTGGGAGCTCCCA+TGG 0.440454 4.4:+23092443 None:intergenic
TTTCATGGAGATCTTAATAG+TGG 0.440666 4.4:-23091289 MS.gene32173:CDS
GGGCTGCTACTTCTGGGTAT+TGG 0.442139 4.4:-23092193 MS.gene32173:CDS
AATGATGACAATTTCTTCGA+TGG 0.445563 4.4:-23091475 MS.gene32173:CDS
AACTAGTTCCAATTTATGTC+CGG 0.449473 4.4:+23091133 None:intergenic
GCTTCTTGAAGATGAATGTT+TGG 0.449692 4.4:+23091516 None:intergenic
CCAATAGGGCTGCTACTTCT+GGG 0.454581 4.4:-23092199 MS.gene32173:CDS
ATCTCTGCTATGATGGCTAC+TGG 0.455487 4.4:+23092485 None:intergenic
AAGCCTATATTAACATCTGA+TGG 0.457224 4.4:-23092152 MS.gene32173:CDS
GAGGCAACAATTTCAACTTC+CGG 0.462175 4.4:-23091152 MS.gene32173:CDS
TGGAATGAAACAGGGTCACC+AGG 0.466947 4.4:-23091334 MS.gene32173:CDS
AAATGGAGCAAGACCCAATA+GGG 0.470103 4.4:-23092213 MS.gene32173:CDS
CAAATGGAGCAAGACCCAAT+AGG 0.479465 4.4:-23092214 MS.gene32173:CDS
GGAAACCTGGTGGTAGGTGG+GGG 0.480157 4.4:+23092576 None:intergenic
TCTGGGTATTGGAAAGCTAC+TGG 0.487868 4.4:-23092182 MS.gene32173:CDS
ATTGGATCATGCATGAGTAT+AGG 0.492325 4.4:-23092058 MS.gene32173:CDS
CATTTAGTGCACGTTTCATA+GGG 0.495376 4.4:+23091371 None:intergenic
GGTCATCTTCTTCAAGCAAA+CGG 0.495966 4.4:-23091312 MS.gene32173:CDS
TCTGATGGGAATCAGAAAGT+TGG 0.499516 4.4:-23092137 MS.gene32173:CDS
GTGGGGTGGAATCGGAAACC+TGG 0.501175 4.4:+23092563 None:intergenic
AAGTTGTTCTTGGTGGAAGC+TGG 0.503644 4.4:+23091218 None:intergenic
CGGAAACCTGGTGGTAGGTG+GGG 0.504339 4.4:+23092575 None:intergenic
TCGGAAACCTGGTGGTAGGT+GGG 0.504413 4.4:+23092574 None:intergenic
GCTATGATGGCTACTGGAAG+TGG 0.505754 4.4:+23092491 None:intergenic
ATTCTTGGATCTGTTGGAGA+TGG 0.516290 4.4:-23091181 MS.gene32173:CDS
GAGATCAATCTCTGCTATGA+TGG 0.523237 4.4:+23092478 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.531070 4.4:-23092460 MS.gene32173:CDS
AGGGATAGAAAATACCCAAA+TGG 0.534980 4.4:-23092230 MS.gene32173:CDS
TTGTTTGGAGGATGATCAGA+AGG 0.535030 4.4:+23091978 None:intergenic
TATGGAGGGAAGCCACCAAA+AGG 0.535327 4.4:-23092092 MS.gene32173:CDS
TGATGAAAAGTTGTTCTTGG+TGG 0.544981 4.4:+23091211 None:intergenic
GGATGATCAGAAGGCATAGG+AGG 0.548968 4.4:+23091987 None:intergenic
GGTTGTGACACAAACTCAAA+GGG 0.556107 4.4:-23091421 MS.gene32173:CDS
ACTACGAGTTCTTCATCGGT+GGG 0.558882 4.4:+23092545 None:intergenic
CATTAAGAGCGGCCTTGGCA+TGG 0.565774 4.4:+23091582 None:intergenic
CGAGTTCTTCATCGGTGGGG+TGG 0.573171 4.4:+23092549 None:intergenic
TCGTACTTGGGAGCTCCCAT+GGG 0.577363 4.4:+23092444 None:intergenic
TGGTTGTGACACAAACTCAA+AGG 0.577669 4.4:-23091422 MS.gene32173:CDS
GGAATCGGAAACCTGGTGGT+AGG 0.585801 4.4:+23092570 None:intergenic
GTGAACTACGAGTTCTTCAT+CGG 0.590635 4.4:+23092541 None:intergenic
AGCCTATATTAACATCTGAT+GGG 0.592875 4.4:-23092151 MS.gene32173:CDS
GGAATCTTTGCAAATGATCA+CGG 0.595620 4.4:-23091454 MS.gene32173:CDS
AACTACGAGTTCTTCATCGG+TGG 0.606004 4.4:+23092544 None:intergenic
TGGAATAAGTAGCAATGCTG+AGG 0.609239 4.4:-23091269 MS.gene32173:CDS
GGAGGATGATCAGAAGGCAT+AGG 0.615056 4.4:+23091984 None:intergenic
GCAACAGTAGCACCATGCCA+AGG 0.616723 4.4:-23091594 MS.gene32173:CDS
TCTCTACAAATTCGACCCAT+GGG 0.621113 4.4:-23092459 MS.gene32173:CDS
CTACGAGTTCTTCATCGGTG+GGG 0.640544 4.4:+23092546 None:intergenic
CTGTTGGAGATGGTGTAATG+AGG 0.645707 4.4:-23091171 MS.gene32173:CDS
GGAATGAAACAGGGTCACCA+GGG 0.654300 4.4:-23091333 MS.gene32173:CDS
TAACAAGAAGAATTCCCTGA+GGG 0.663347 4.4:-23091955 MS.gene32173:intron
TGTGCATATACATACCCTCA+GGG 0.676749 4.4:+23091941 None:intergenic
TCATATTGATCCATTAAGAG+CGG 0.679884 4.4:+23091571 None:intergenic
GGGTGGAATCGGAAACCTGG+TGG 0.682142 4.4:+23092566 None:intergenic
TTGCTTGAAGAAGATGACCC+TGG 0.699438 4.4:+23091316 None:intergenic
TGTGACACAAACTCAAAGGG+TGG 0.701015 4.4:-23091418 MS.gene32173:CDS
ATAACAAGAAGAATTCCCTG+AGG 0.759166 4.4:-23091956 MS.gene32173:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATAATTGAACA+TGG - chr4.4:23091862-23091881 MS.gene32173:intron 10.0%
!! ATTTCTTTAATATAAAAACA+TGG + chr4.4:23092063-23092082 None:intergenic 10.0%
!!! CTCTTTTTTTTTTTTTTTAT+AGG - chr4.4:23091450-23091469 MS.gene32173:CDS 10.0%
!!! TTAACATTTTTTTATTGTAT+TGG - chr4.4:23092084-23092103 MS.gene32173:CDS 10.0%
!! AAAAAAAAAAGAGAAAAAAC+AGG + chr4.4:23091443-23091462 None:intergenic 15.0%
!!! TTTTTTTATTGTATTGGTTT+TGG - chr4.4:23092090-23092109 MS.gene32173:CDS 15.0%
!! AAAATTTCATATGCAAAACA+TGG + chr4.4:23091394-23091413 None:intergenic 20.0%
!! TTTCATCAAAATTCAATTCT+TGG - chr4.4:23092550-23092569 MS.gene32173:CDS 20.0%
!!! GTTTTGTTGCATATTATTAT+AGG + chr4.4:23092209-23092228 None:intergenic 20.0%
! AAACATGGAACATAAAATCT+AGG + chr4.4:23091379-23091398 None:intergenic 25.0%
! AAATGGATGAAAAGATGAAA+TGG + chr4.4:23091342-23091361 None:intergenic 25.0%
! AATGGATGAAAAGATGAAAT+GGG + chr4.4:23091341-23091360 None:intergenic 25.0%
! ATATGCATAGTTATGAAACA+CGG - chr4.4:23091955-23091974 MS.gene32173:intron 25.0%
! ATTTATGAAACAAATGCACA+TGG + chr4.4:23091845-23091864 None:intergenic 25.0%
! CAAAAGGAGTTAAAACTAAT+TGG - chr4.4:23091670-23091689 MS.gene32173:intron 25.0%
! GAAAAAACAGGACAATATTT+CGG + chr4.4:23091431-23091450 None:intergenic 25.0%
!! AGTTTTTGAACTTGCATTAT+AGG + chr4.4:23091739-23091758 None:intergenic 25.0%
!! TTATAGGTAAAGCAAGTTTT+GGG - chr4.4:23091466-23091485 MS.gene32173:CDS 25.0%
!! TTTATAGGTAAAGCAAGTTT+TGG - chr4.4:23091465-23091484 MS.gene32173:CDS 25.0%
!! TTTTGATGAAAAGTTGTTCT+TGG + chr4.4:23092541-23092560 None:intergenic 25.0%
!!! AAGAAAGCACTTGTTTTTTA+TGG - chr4.4:23091636-23091655 MS.gene32173:intron 25.0%
!!! CAATTAGTTTTAACTCCTTT+TGG + chr4.4:23091672-23091691 None:intergenic 25.0%
!!! CGCTAATAATTTTAGAAAAC+CGG - chr4.4:23092004-23092023 MS.gene32173:CDS 25.0%
!!! CTAATAATTTTAGAAAACCG+GGG - chr4.4:23092006-23092025 MS.gene32173:CDS 25.0%
!!! GAATTCTTCTTGTTATTGTT+TGG + chr4.4:23091786-23091805 None:intergenic 25.0%
!!! GCTAATAATTTTAGAAAACC+GGG - chr4.4:23092005-23092024 MS.gene32173:CDS 25.0%
!!! TGTTGCTTTTCTTGTATATT+CGG + chr4.4:23092138-23092157 None:intergenic 25.0%
AAGATCAGACCATTCAAAAA+AGG + chr4.4:23091914-23091933 None:intergenic 30.0%
AAGCCTATATTAACATCTGA+TGG - chr4.4:23091594-23091613 MS.gene32173:CDS 30.0%
AATGATGACAATTTCTTCGA+TGG - chr4.4:23092271-23092290 MS.gene32173:CDS 30.0%
AATTCAATTCTTGGATCTGT+TGG - chr4.4:23092559-23092578 MS.gene32173:CDS 30.0%
AGCCTATATTAACATCTGAT+GGG - chr4.4:23091595-23091614 MS.gene32173:CDS 30.0%
ATGGATGAAAAGATGAAATG+GGG + chr4.4:23091340-23091359 None:intergenic 30.0%
TCATATTGATCCATTAAGAG+CGG + chr4.4:23092178-23092197 None:intergenic 30.0%
TGTGAAAAAGTTTCGTACTT+GGG + chr4.4:23091317-23091336 None:intergenic 30.0%
TTCCCATCAGATGTTAATAT+AGG + chr4.4:23091600-23091619 None:intergenic 30.0%
TTTCATGGAGATCTTAATAG+TGG - chr4.4:23092457-23092476 MS.gene32173:CDS 30.0%
! GAACATAAAATCTAGGATGT+AGG + chr4.4:23091372-23091391 None:intergenic 30.0%
! TAAATGCATCATCACAGTTT+TGG - chr4.4:23092392-23092411 MS.gene32173:intron 30.0%
! TATAGGTAAAGCAAGTTTTG+GGG - chr4.4:23091467-23091486 MS.gene32173:CDS 30.0%
!! TTCTTCTTGTTATTGTTTGG+AGG + chr4.4:23091783-23091802 None:intergenic 30.0%
!!! AAAGCACTTGTTTTTTATGG+AGG - chr4.4:23091639-23091658 MS.gene32173:intron 30.0%
!!! AAGCACTTGTTTTTTATGGA+GGG - chr4.4:23091640-23091659 MS.gene32173:intron 30.0%
!!! TTAGTTTTAACTCCTTTTGG+TGG + chr4.4:23091669-23091688 None:intergenic 30.0%
AATGATCACGGAATGCAAAA+TGG - chr4.4:23092304-23092323 MS.gene32173:intron 35.0%
AGGATGTAGGTTTGAGTAAA+TGG + chr4.4:23091359-23091378 None:intergenic 35.0%
AGGGATAGAAAATACCCAAA+TGG - chr4.4:23091516-23091535 MS.gene32173:CDS 35.0%
ATAACAAGAAGAATTCCCTG+AGG - chr4.4:23091790-23091809 MS.gene32173:intron 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr4.4:23091688-23091707 MS.gene32173:intron 35.0%
CATTTAGTGCACGTTTCATA+GGG + chr4.4:23092378-23092397 None:intergenic 35.0%
GCTTCTTGAAGATGAATGTT+TGG + chr4.4:23092233-23092252 None:intergenic 35.0%
GGAATCTTTGCAAATGATCA+CGG - chr4.4:23092292-23092311 MS.gene32173:intron 35.0%
GTGTGAAAAAGTTTCGTACT+TGG + chr4.4:23091318-23091337 None:intergenic 35.0%
TAACAAGAAGAATTCCCTGA+GGG - chr4.4:23091791-23091810 MS.gene32173:intron 35.0%
TGATGAAAAGTTGTTCTTGG+TGG + chr4.4:23092538-23092557 None:intergenic 35.0%
TTCAACTTCCGGACATAAAT+TGG - chr4.4:23092605-23092624 MS.gene32173:CDS 35.0%
! TCTTCAAGAAGCACAAGTTA+TGG - chr4.4:23092241-23092260 MS.gene32173:CDS 35.0%
! TTGGGTATTTTCTATCCCTT+GGG + chr4.4:23091515-23091534 None:intergenic 35.0%
! TTTGGGTATTTTCTATCCCT+TGG + chr4.4:23091516-23091535 None:intergenic 35.0%
!! ATAATTTTAGAAAACCGGGG+AGG - chr4.4:23092009-23092028 MS.gene32173:CDS 35.0%
!! TAATTTTAGAAAACCGGGGA+GGG - chr4.4:23092010-23092029 MS.gene32173:CDS 35.0%
!!! CACAGTTTTGGAATGAAACA+GGG - chr4.4:23092404-23092423 MS.gene32173:intron 35.0%
!!! CTCTCTGTTCCTTTTTTGAA+TGG - chr4.4:23091902-23091921 MS.gene32173:intron 35.0%
!!! TCACAGTTTTGGAATGAAAC+AGG - chr4.4:23092403-23092422 MS.gene32173:intron 35.0%
AAATGGAGCAAGACCCAATA+GGG - chr4.4:23091533-23091552 MS.gene32173:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr4.4:23091286-23091305 MS.gene32173:CDS 40.0%
ATTCTTGGATCTGTTGGAGA+TGG - chr4.4:23092565-23092584 MS.gene32173:CDS 40.0%
GAGATCAATCTCTGCTATGA+TGG + chr4.4:23091271-23091290 None:intergenic 40.0%
GAGGCAACAATTTCAACTTC+CGG - chr4.4:23092594-23092613 MS.gene32173:CDS 40.0%
GCATTTAGTGCACGTTTCAT+AGG + chr4.4:23092379-23092398 None:intergenic 40.0%
GGTCATCTTCTTCAAGCAAA+CGG - chr4.4:23092434-23092453 MS.gene32173:intron 40.0%
GGTTGTGACACAAACTCAAA+GGG - chr4.4:23092325-23092344 MS.gene32173:intron 40.0%
GTGAACTACGAGTTCTTCAT+CGG + chr4.4:23091208-23091227 None:intergenic 40.0%
TATTGGGTCTTGCTCCATTT+GGG + chr4.4:23091533-23091552 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr4.4:23091287-23091306 MS.gene32173:CDS 40.0%
TCTGATGGGAATCAGAAAGT+TGG - chr4.4:23091609-23091628 MS.gene32173:CDS 40.0%
TCTTCAAGCAAACGGTTTCA+TGG - chr4.4:23092442-23092461 MS.gene32173:intron 40.0%
TGGAATAAGTAGCAATGCTG+AGG - chr4.4:23092477-23092496 MS.gene32173:CDS 40.0%
TGGTTGTGACACAAACTCAA+AGG - chr4.4:23092324-23092343 MS.gene32173:intron 40.0%
TGTGCATATACATACCCTCA+GGG + chr4.4:23091808-23091827 None:intergenic 40.0%
TTGTTTGGAGGATGATCAGA+AGG + chr4.4:23091771-23091790 None:intergenic 40.0%
! CAGAAGCAGCTTTTCTTTTG+AGG + chr4.4:23091233-23091252 None:intergenic 40.0%
!!! GGTTTTGGAGCTTGATGATT+GGG - chr4.4:23092105-23092124 MS.gene32173:CDS 40.0%
!!! TGGTTTTGGAGCTTGATGAT+TGG - chr4.4:23092104-23092123 MS.gene32173:CDS 40.0%
AACTACGAGTTCTTCATCGG+TGG + chr4.4:23091205-23091224 None:intergenic 45.0%
AAGTTGTTCTTGGTGGAAGC+TGG + chr4.4:23092531-23092550 None:intergenic 45.0%
ACTACGAGTTCTTCATCGGT+GGG + chr4.4:23091204-23091223 None:intergenic 45.0%
ATCTCTGCTATGATGGCTAC+TGG + chr4.4:23091264-23091283 None:intergenic 45.0%
CAAATGGAGCAAGACCCAAT+AGG - chr4.4:23091532-23091551 MS.gene32173:CDS 45.0%
CTATTGGGTCTTGCTCCATT+TGG + chr4.4:23091534-23091553 None:intergenic 45.0%
CTGTTGGAGATGGTGTAATG+AGG - chr4.4:23092575-23092594 MS.gene32173:CDS 45.0%
GTGTGCATATACATACCCTC+AGG + chr4.4:23091809-23091828 None:intergenic 45.0%
TGTGACACAAACTCAAAGGG+TGG - chr4.4:23092328-23092347 MS.gene32173:intron 45.0%
TTGCTTGAAGAAGATGACCC+TGG + chr4.4:23092433-23092452 None:intergenic 45.0%
!! TCTGGGTATTGGAAAGCTAC+TGG - chr4.4:23091564-23091583 MS.gene32173:CDS 45.0%
!!! AGTGGTACTTTTTCAGCCCA+AGG - chr4.4:23091496-23091515 MS.gene32173:CDS 45.0%
!!! CAAGTTTTGGGGAACAAGAG+TGG - chr4.4:23091478-23091497 MS.gene32173:CDS 45.0%
!!! GTGGTACTTTTTCAGCCCAA+GGG - chr4.4:23091497-23091516 MS.gene32173:CDS 45.0%
AATGAAACACAGACCCTCCC+CGG + chr4.4:23092026-23092045 None:intergenic 50.0%
CCAGAAGTAGCAGCCCTATT+GGG + chr4.4:23091549-23091568 None:intergenic 50.0%
CTACGAGTTCTTCATCGGTG+GGG + chr4.4:23091203-23091222 None:intergenic 50.0%
GCTATGATGGCTACTGGAAG+TGG + chr4.4:23091258-23091277 None:intergenic 50.0%
GGAATGAAACAGGGTCACCA+GGG - chr4.4:23092413-23092432 MS.gene32173:intron 50.0%
TATGGAGGGAAGCCACCAAA+AGG - chr4.4:23091654-23091673 MS.gene32173:intron 50.0%
TGATCCATTAAGAGCGGCCT+TGG + chr4.4:23092172-23092191 None:intergenic 50.0%
TGGAATGAAACAGGGTCACC+AGG - chr4.4:23092412-23092431 MS.gene32173:intron 50.0%
! CCAATAGGGCTGCTACTTCT+GGG - chr4.4:23091547-23091566 MS.gene32173:CDS 50.0%
! GGAGGATGATCAGAAGGCAT+AGG + chr4.4:23091765-23091784 None:intergenic 50.0%
! GGATGATCAGAAGGCATAGG+AGG + chr4.4:23091762-23091781 None:intergenic 50.0%
ATCGGAAACCTGGTGGTAGG+TGG + chr4.4:23091176-23091195 None:intergenic 55.0%
CATGCCAAGGCCGCTCTTAA+TGG - chr4.4:23092165-23092184 MS.gene32173:CDS 55.0%
CATTAAGAGCGGCCTTGGCA+TGG + chr4.4:23092167-23092186 None:intergenic 55.0%
CCCAGAAGTAGCAGCCCTAT+TGG + chr4.4:23091550-23091569 None:intergenic 55.0%
CTTCATCGGTGGGGTGGAAT+CGG + chr4.4:23091194-23091213 None:intergenic 55.0%
GCAACAGTAGCACCATGCCA+AGG - chr4.4:23092152-23092171 MS.gene32173:CDS 55.0%
GGAATCGGAAACCTGGTGGT+AGG + chr4.4:23091179-23091198 None:intergenic 55.0%
TCGGAAACCTGGTGGTAGGT+GGG + chr4.4:23091175-23091194 None:intergenic 55.0%
TCGTACTTGGGAGCTCCCAT+GGG + chr4.4:23091305-23091324 None:intergenic 55.0%
TTCGTACTTGGGAGCTCCCA+TGG + chr4.4:23091306-23091325 None:intergenic 55.0%
! CCCAATAGGGCTGCTACTTC+TGG - chr4.4:23091546-23091565 MS.gene32173:CDS 55.0%
! GGGCTGCTACTTCTGGGTAT+TGG - chr4.4:23091553-23091572 MS.gene32173:CDS 55.0%
CGAGTTCTTCATCGGTGGGG+TGG + chr4.4:23091200-23091219 None:intergenic 60.0%
CGGAAACCTGGTGGTAGGTG+GGG + chr4.4:23091174-23091193 None:intergenic 60.0%
GGAAACCTGGTGGTAGGTGG+GGG + chr4.4:23091173-23091192 None:intergenic 60.0%
GGGTGGAATCGGAAACCTGG+TGG + chr4.4:23091183-23091202 None:intergenic 60.0%
GTGGGGTGGAATCGGAAACC+TGG + chr4.4:23091186-23091205 None:intergenic 60.0%
CCACACCCCCACCTACCACC+AGG - chr4.4:23091165-23091184 MS.gene32173:CDS 70.0%
CCTGGTGGTAGGTGGGGGTG+TGG + chr4.4:23091168-23091187 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 23091135 23092633 23091135 ID=MS.gene32173
chr4.4 mRNA 23091135 23092633 23091135 ID=MS.gene32173.t1;Parent=MS.gene32173
chr4.4 exon 23092450 23092633 23092450 ID=MS.gene32173.t1.exon1;Parent=MS.gene32173.t1
chr4.4 CDS 23092450 23092633 23092450 ID=cds.MS.gene32173.t1;Parent=MS.gene32173.t1
chr4.4 exon 23091956 23092296 23091956 ID=MS.gene32173.t1.exon2;Parent=MS.gene32173.t1
chr4.4 CDS 23091956 23092296 23091956 ID=cds.MS.gene32173.t1;Parent=MS.gene32173.t1
chr4.4 exon 23091135 23091653 23091135 ID=MS.gene32173.t1.exon3;Parent=MS.gene32173.t1
chr4.4 CDS 23091135 23091653 23091135 ID=cds.MS.gene32173.t1;Parent=MS.gene32173.t1
Gene Sequence

>MS.gene32173

ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGTTTCCGATTCCACCCCACCGATGAAGAACTCGTAGTTCACTACCTCAAAAGAAAAGCTGCTTCTGCACCACTTCCAGTAGCCATCATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAGCTCCCAAGTACGAAACTTTTTCACACCCCATTTCATCTTTTCATCCATTTACTCAAACCTACATCCTAGATTTTATGTTCCATGTTTTGCATATGAAATTTTGAACATGTTTTAATCCGAAATATTGTCCTGTTTTTTCTCTTTTTTTTTTTTTTTATAGGTAAAGCAAGTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGAGCAAGACCCAATAGGGCTGCTACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGAGTTAAAACTAATTGGATCATGCATGAGTATAGGCTCATCACTGATTATAATCATAATTCCTATAATGCAAGTTCAAAAACTCCTCCTATGCCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCCCTGAGGGTATGTATATGCACACACATAATTGCATGCCATGTGCATTTGTTTCATAAATTAATAAATAATTGAACATGGACACTAAATTATATCTTCTCTCTGTTCCTTTTTTGAATGGTCTGATCTTTAAAGTATAATTTTGTTAATCATATGCATAGTTATGAAACACGGATACTGACACGACAATGACACTGACACGCTAATAATTTTAGAAAACCGGGGAGGGTCTGTGTTTCATTGCATATTCATTAAACCATGTTTTTATATTAAAGAAATATTAACATTTTTTTATTGTATTGGTTTTGGAGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCGCTCTTAATGGATCAATATGATGATCAAACCTATAATAATATGCAACAAAACTCCAAACATTCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTCGATGGAATCTTTGCAAATGATCACGGAATGCAAAATGGTTGTGACACAAACTCAAAGGGTGGTAACAATAATAATGAATCATTATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGGTCACCAGGGTCATCTTCTTCAAGCAAACGGTTTCATGGAGATCTTAATAGTGGAATAAGTAGCAATGCTGAGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGAACAACTTTTCATCAAAATTCAATTCTTGGATCTGTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG
Protein sequence

>MS.gene32173.t1

MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDYNHNSYNASSKTPPMPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPLLMDQYDDQTYNNMQQNSKHSSSRSTSYGLENDDNFFDGIFANDHGMQNGCDTNSKGGNNNNESLFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNSGISSNAEENNSFVSLLSQLPPRTTFHQNSILGSVGDGVMRQQFQLPDINWN