Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32179.t1 | XP_003608183.2 | 92.1 | 557 | 44 | 0 | 1 | 557 | 1 | 557 | 2.60E-280 | 974.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32179.t1 | G7JQR8 | 92.1 | 557 | 44 | 0 | 1 | 557 | 1 | 557 | 1.9e-280 | 974.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene32179.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32179.t1 | MTR_4g090460 | 95.512 | 557 | 25 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1070 |
| MS.gene32179.t1 | MTR_4g090460 | 94.885 | 391 | 20 | 0 | 167 | 557 | 1 | 391 | 0.0 | 740 |
| MS.gene32179.t1 | MTR_4g090460 | 81.915 | 94 | 17 | 0 | 104 | 197 | 29 | 122 | 6.94e-44 | 160 |
| MS.gene32179.t1 | MTR_2g012600 | 51.250 | 480 | 207 | 11 | 95 | 556 | 275 | 745 | 5.80e-119 | 369 |
| MS.gene32179.t1 | MTR_2g012600 | 61.455 | 275 | 96 | 5 | 9 | 278 | 4 | 273 | 4.25e-94 | 303 |
| MS.gene32179.t1 | MTR_2g060760 | 34.857 | 175 | 79 | 5 | 9 | 148 | 21 | 195 | 3.92e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32179.t1 | AT1G61215 | 60.494 | 162 | 56 | 5 | 9 | 166 | 14 | 171 | 1.61e-49 | 178 |
| MS.gene32179.t1 | AT1G61215 | 36.795 | 337 | 170 | 13 | 201 | 514 | 111 | 427 | 3.99e-34 | 135 |
| MS.gene32179.t1 | AT1G61215 | 36.795 | 337 | 170 | 13 | 201 | 514 | 92 | 408 | 7.71e-34 | 134 |
| MS.gene32179.t1 | AT1G61215 | 55.738 | 122 | 47 | 4 | 49 | 166 | 34 | 152 | 6.67e-27 | 114 |
| MS.gene32179.t1 | AT2G42150 | 31.148 | 244 | 133 | 6 | 8 | 239 | 15 | 235 | 8.33e-18 | 87.4 |
| MS.gene32179.t1 | AT3G60110 | 30.625 | 160 | 84 | 2 | 4 | 143 | 47 | 199 | 2.04e-15 | 79.7 |
| MS.gene32179.t1 | AT2G44430 | 39.655 | 116 | 47 | 3 | 9 | 101 | 50 | 165 | 3.06e-14 | 76.3 |
| MS.gene32179.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 8.11e-14 | 74.7 |
| MS.gene32179.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 8.57e-14 | 74.7 |
Find 122 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATCTCGCCTGGTGTTTC+AGG | 0.123019 | 4.4:-22999819 | MS.gene32179:CDS |
| GAGATTACGCCTGGTGTTTC+AGG | 0.146830 | 4.4:-22999546 | MS.gene32179:CDS |
| ACATGTTCCTTCACAGAAAT+TGG | 0.179613 | 4.4:-22999694 | MS.gene32179:CDS |
| ACTCGCTTCATTAATATTTC+TGG | 0.224605 | 4.4:+22999410 | None:intergenic |
| CTGTTGCAATTCTTCATATT+TGG | 0.258493 | 4.4:+23000631 | None:intergenic |
| ACATGGGAGGAGCTTCTTCT+TGG | 0.262308 | 4.4:-23002306 | MS.gene32179:CDS |
| CTCATTCTTGTCAGCCTTGA+GGG | 0.265381 | 4.4:+23000037 | None:intergenic |
| CCTTTGCAACATTAATCTTC+TGG | 0.292069 | 4.4:+22998035 | None:intergenic |
| ACCACCAGTACTAGGCTTCT+TGG | 0.302528 | 4.4:+22997970 | None:intergenic |
| CTTATATTGACGGGTGTTCT+TGG | 0.307524 | 4.4:+22998186 | None:intergenic |
| TTCATAAGATTCGGAGTTGC+AGG | 0.312088 | 4.4:+22997872 | None:intergenic |
| TGTGAAGGAACATGTGATTC+TGG | 0.321301 | 4.4:+22999702 | None:intergenic |
| GAATTGCAACAGCGCTATTC+AGG | 0.321488 | 4.4:-23000620 | MS.gene32179:CDS |
| TGTGAAGGAACATCTAATTC+TGG | 0.326164 | 4.4:+22999975 | None:intergenic |
| GGTGAGGTTGTCAAATCTTC+TGG | 0.339149 | 4.4:-22999324 | MS.gene32179:CDS |
| ACATGGACTTTGACACTATA+AGG | 0.354571 | 4.4:-22998297 | MS.gene32179:CDS |
| TTCATTTCCTTCATAAGATT+CGG | 0.356180 | 4.4:+22997863 | None:intergenic |
| GGAGAACACGAACTTGAAAA+AGG | 0.362922 | 4.4:-22999292 | MS.gene32179:CDS |
| GAGAAATCAGAAGATTCAAT+TGG | 0.363491 | 4.4:-23000338 | MS.gene32179:CDS |
| AGCAGAGCTTAAGCGAGCTT+TGG | 0.364114 | 4.4:-23000360 | MS.gene32179:CDS |
| CAGAAGACATTGCTGGAACT+TGG | 0.372442 | 4.4:+22999577 | None:intergenic |
| GACAACCTCACCACAGTTGC+TGG | 0.380777 | 4.4:+22999335 | None:intergenic |
| TGGGAGGAGCTTCTTCTTGG+TGG | 0.399007 | 4.4:-23002303 | MS.gene32179:CDS |
| ATTCAAAACTTTCTCATGTT+CGG | 0.403224 | 4.4:+22999518 | None:intergenic |
| TTCTTGGTGGAGCTGTTATC+CGG | 0.405630 | 4.4:-23002290 | MS.gene32179:CDS |
| TCCGGCACGGCACTGGTGAT+TGG | 0.416103 | 4.4:-23002272 | MS.gene32179:CDS |
| CACTGCTAGGGCTTGGTATG+AGG | 0.418968 | 4.4:-23000402 | MS.gene32179:intron |
| TCTTTACTACCACCAGTACT+AGG | 0.419066 | 4.4:+22997962 | None:intergenic |
| TCAAAGGATGGGCTATCTGC+TGG | 0.419315 | 4.4:-22999915 | MS.gene32179:CDS |
| CACATCAAACCGATACAAAC+TGG | 0.424104 | 4.4:-22999884 | MS.gene32179:CDS |
| AAAGGAGAGGAAAGAGAAAG+AGG | 0.432152 | 4.4:-22999443 | MS.gene32179:CDS |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.4:+22999570 | None:intergenic |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.4:+22999843 | None:intergenic |
| ACATTAATCTTCTGGTTACA+AGG | 0.444554 | 4.4:+22998043 | None:intergenic |
| CAGAAGACATTGCTGGAACC+TGG | 0.448111 | 4.4:+22999850 | None:intergenic |
| TGTCAAAGTCCATGTGTCTC+TGG | 0.448970 | 4.4:+22998305 | None:intergenic |
| GCTGTTATCCGGCACGGCAC+TGG | 0.459398 | 4.4:-23002279 | MS.gene32179:CDS |
| GATGGCAGCGATCCTGCCTC+GGG | 0.461840 | 4.4:-22998007 | MS.gene32179:CDS |
| GACAGCTTTCTTGATGTGTA+AGG | 0.464881 | 4.4:+22997916 | None:intergenic |
| CGATGGCAGCGATCCTGCCT+CGG | 0.469474 | 4.4:-22998008 | MS.gene32179:CDS |
| TAAAGAGAATTCTCCGTCTT+CGG | 0.474363 | 4.4:-22997945 | MS.gene32179:CDS |
| AGATCTCGCCTGGTGTTTCA+GGG | 0.481234 | 4.4:-22999818 | MS.gene32179:CDS |
| TGGTAGAACTTTCTTTCAGC+CGG | 0.484226 | 4.4:+22999355 | None:intergenic |
| TGGTTACAAGGGCGGACACT+TGG | 0.484662 | 4.4:+22998055 | None:intergenic |
| ACTAAAGAGTTGTCAAAGGA+TGG | 0.489392 | 4.4:-22999927 | MS.gene32179:CDS |
| AGAAATCAGAAGATTCAATT+GGG | 0.490341 | 4.4:-23000337 | MS.gene32179:intron |
| ACCAATCACCAGTGCCGTGC+CGG | 0.491886 | 4.4:+23002271 | None:intergenic |
| AAATGAAGGAAAAGAAAAGA+CGG | 0.493555 | 4.4:-22997847 | MS.gene32179:CDS |
| CTTGTTGACAACAACTCAGT+TGG | 0.494073 | 4.4:-22999999 | MS.gene32179:CDS |
| AGATTACGCCTGGTGTTTCA+GGG | 0.501278 | 4.4:-22999545 | MS.gene32179:CDS |
| AAAAGAAAAGACGGAGAACT+AGG | 0.503354 | 4.4:-22997838 | MS.gene32179:CDS |
| TCTCATTCTTGTCAGCCTTG+AGG | 0.505573 | 4.4:+23000036 | None:intergenic |
| GAAGACATGGAGATCTCGCC+TGG | 0.524803 | 4.4:-22999828 | MS.gene32179:CDS |
| AGCGGAAGTGATTGTGACGT+GGG | 0.526318 | 4.4:-23002331 | MS.gene32179:CDS |
| ACTAAAGAGACGTCAAAGGA+TGG | 0.530356 | 4.4:-22999654 | MS.gene32179:CDS |
| GATAAGTTGACAGATACAGC+TGG | 0.532080 | 4.4:-22999765 | MS.gene32179:CDS |
| GAGAGGAAAGAGAAAGAGGA+AGG | 0.532691 | 4.4:-22999439 | MS.gene32179:CDS |
| GAATCTTATGAAGGAAATGA+AGG | 0.534107 | 4.4:-22997861 | MS.gene32179:CDS |
| CTGTCGTAAGCATGATAGCC+AGG | 0.534429 | 4.4:-22999205 | MS.gene32179:intron |
| GGTAGAACTTTCTTTCAGCC+GGG | 0.535651 | 4.4:+22999356 | None:intergenic |
| TCAAAGGATGGGTTATCTGC+TGG | 0.536634 | 4.4:-22999642 | MS.gene32179:CDS |
| ACTCTCTCCAATTTCTGTGA+AGG | 0.536812 | 4.4:+22999687 | None:intergenic |
| GGTTACAAGGGCGGACACTT+GGG | 0.540653 | 4.4:+22998056 | None:intergenic |
| CAACAAAACAATTGATTCAG+TGG | 0.544548 | 4.4:-22998263 | MS.gene32179:CDS |
| TCGTCGCGGCGGAGCTCCGA+GGG | 0.544805 | 4.4:-23002245 | MS.gene32179:CDS |
| AAACTGGTCTCATGAATGCC+AGG | 0.546467 | 4.4:-22999868 | MS.gene32179:CDS |
| GTAGAACAGCAAAGCATTGG+TGG | 0.547197 | 4.4:+22998210 | None:intergenic |
| TCGGAGCTCCGCCGCGACGA+CGG | 0.548546 | 4.4:+23002248 | None:intergenic |
| TGCAACTCCGAATCTTATGA+AGG | 0.548743 | 4.4:-22997870 | MS.gene32179:CDS |
| CAAAGGATGGGCTATCTGCT+GGG | 0.550496 | 4.4:-22999914 | MS.gene32179:CDS |
| TTCATGAGACCAGTTTGTAT+CGG | 0.551753 | 4.4:+22999875 | None:intergenic |
| CCAGAAGATTAATGTTGCAA+AGG | 0.552998 | 4.4:-22998035 | MS.gene32179:CDS |
| GGAGTAGAACAGCAAAGCAT+TGG | 0.553418 | 4.4:+22998207 | None:intergenic |
| AAAGCCAAGAAGCCTAGTAC+TGG | 0.562628 | 4.4:-22997974 | MS.gene32179:CDS |
| GTCGTCGCGGCGGAGCTCCG+AGG | 0.563753 | 4.4:-23002246 | MS.gene32179:CDS |
| GAAGACATGGAGATTACGCC+TGG | 0.563944 | 4.4:-22999555 | MS.gene32179:CDS |
| CGAGGCAGGATCGCTGCCAT+CGG | 0.565755 | 4.4:+22998009 | None:intergenic |
| TTGAAAGAGACTGTATATGA+AGG | 0.565850 | 4.4:-22999486 | MS.gene32179:CDS |
| ACACTTGGGACTTTCAAAGA+AGG | 0.569561 | 4.4:+22998070 | None:intergenic |
| CTAAAGAGTTGTCAAAGGAT+GGG | 0.572945 | 4.4:-22999926 | MS.gene32179:CDS |
| TGTAAGGATTTCACCGAAGA+CGG | 0.573201 | 4.4:+22997932 | None:intergenic |
| TAGTGCAGACTTATATTGAC+GGG | 0.575938 | 4.4:+22998177 | None:intergenic |
| GGTGTAATAGCGGAAGGAGA+AGG | 0.576294 | 4.4:+23002216 | None:intergenic |
| GGTGGAGCTGTTATCCGGCA+CGG | 0.577297 | 4.4:-23002285 | MS.gene32179:CDS |
| ACTCTCTCTAATTTCTGTGA+AGG | 0.579129 | 4.4:+22999960 | None:intergenic |
| CTAAAGAGACGTCAAAGGAT+GGG | 0.581958 | 4.4:-22999653 | MS.gene32179:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.4:-22999568 | MS.gene32179:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.4:-22999841 | MS.gene32179:CDS |
| ACCTCGGGTGTAATAGCGGA+AGG | 0.590376 | 4.4:+23002210 | None:intergenic |
| TTCTACTAAAGAGTTGTCAA+AGG | 0.593159 | 4.4:-22999931 | MS.gene32179:CDS |
| AAGGAGAAGGAGTTCTCCCT+CGG | 0.596440 | 4.4:+23002229 | None:intergenic |
| TTTGATAGCAGAAGCGACAA+AGG | 0.602191 | 4.4:-22998342 | MS.gene32179:intron |
| TCCTTCCGCTATTACACCCG+AGG | 0.606450 | 4.4:-23002211 | MS.gene32179:intron |
| ATCAAAGCTTGAATCCCTCA+AGG | 0.606788 | 4.4:-23000051 | MS.gene32179:CDS |
| GAGCGGAAGTGATTGTGACG+TGG | 0.615869 | 4.4:-23002332 | MS.gene32179:CDS |
| CATTAATCTTCTGGTTACAA+GGG | 0.620404 | 4.4:+22998044 | None:intergenic |
| GGATGGAACGAAATATCTGA+TGG | 0.620871 | 4.4:-22999271 | MS.gene32179:CDS |
| CACATCAAGAAAGCTGTCGG+TGG | 0.621814 | 4.4:-22997911 | MS.gene32179:CDS |
| TGGTGATTGGTCCGTCGTCG+CGG | 0.623067 | 4.4:-23002259 | MS.gene32179:CDS |
| GAAAGTTCTACCAGCAACTG+TGG | 0.627439 | 4.4:-22999345 | MS.gene32179:CDS |
| GCCAAGAAGCCTAGTACTGG+TGG | 0.629237 | 4.4:-22997971 | MS.gene32179:CDS |
| TCAATAGACCCTGAAACACC+AGG | 0.632152 | 4.4:+22999810 | None:intergenic |
| TTCAACTAAAGAGACGTCAA+AGG | 0.633541 | 4.4:-22999658 | MS.gene32179:CDS |
| GTAGTGCAGACTTATATTGA+CGG | 0.634239 | 4.4:+22998176 | None:intergenic |
| TCGGTTGACCCTGAAACACC+AGG | 0.635035 | 4.4:+22999537 | None:intergenic |
| GAGACTGTATATGAAGGACA+TGG | 0.635564 | 4.4:-22999480 | MS.gene32179:CDS |
| TAATCTTCTGGTTACAAGGG+CGG | 0.635573 | 4.4:+22998047 | None:intergenic |
| TTCTACCAGCAACTGTGGTG+AGG | 0.636519 | 4.4:-22999340 | MS.gene32179:CDS |
| CAAATCTTCTGGTGTAACTG+AGG | 0.640200 | 4.4:-22999313 | MS.gene32179:CDS |
| TTACACATCAAGAAAGCTGT+CGG | 0.641394 | 4.4:-22997914 | MS.gene32179:CDS |
| TATTACCTCGGGTGTAATAG+CGG | 0.641692 | 4.4:+23002206 | None:intergenic |
| ATAAGTTGACAGATACAGCT+GGG | 0.644236 | 4.4:-22999764 | MS.gene32179:CDS |
| AATGTTGCAAAGGTAGCCGA+TGG | 0.645708 | 4.4:-22998025 | MS.gene32179:CDS |
| GCGGAAGTGATTGTGACGTG+GGG | 0.650849 | 4.4:-23002330 | MS.gene32179:CDS |
| TGGCAGCGATCCTGCCTCGG+GGG | 0.651961 | 4.4:-22998005 | MS.gene32179:CDS |
| ATGGCAGCGATCCTGCCTCG+GGG | 0.654156 | 4.4:-22998006 | MS.gene32179:CDS |
| CTGTATATGAAGGACATGGA+GGG | 0.672772 | 4.4:-22999476 | MS.gene32179:CDS |
| GCAGTTAATCCAGAGACACA+TGG | 0.675440 | 4.4:-22998314 | MS.gene32179:CDS |
| ACTGTATATGAAGGACATGG+AGG | 0.676971 | 4.4:-22999477 | MS.gene32179:CDS |
| CACGTGTACGAAGATGGGAG+CGG | 0.678942 | 4.4:-23002349 | None:intergenic |
| CGGAAGTGATTGTGACGTGG+GGG | 0.689342 | 4.4:-23002329 | MS.gene32179:CDS |
| TGATTGGTCCGTCGTCGCGG+CGG | 0.715637 | 4.4:-23002256 | MS.gene32179:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAATATTTTTTTTA+AGG | + | chr4.4:22998265-22998284 | None:intergenic | 0.0% |
| !! | AAAATGCTAAAATATATTAA+TGG | - | chr4.4:22998883-22998902 | MS.gene32179:intron | 10.0% |
| !! | AACATATTTAAATAAAAAGA+TGG | - | chr4.4:22999214-22999233 | MS.gene32179:CDS | 10.0% |
| !! | ATTCAAACATAATTTAATAT+TGG | - | chr4.4:22998054-22998073 | MS.gene32179:CDS | 10.0% |
| !!! | TAATGAAATATTTCTATTTT+AGG | + | chr4.4:23001392-23001411 | None:intergenic | 10.0% |
| !!! | TCTTTTTATTTAAATATGTT+AGG | + | chr4.4:22999214-22999233 | None:intergenic | 10.0% |
| !!! | TTTTTATCATAAACTAAATT+GGG | + | chr4.4:22998220-22998239 | None:intergenic | 10.0% |
| !!! | TTTTTTATCATAAACTAAAT+TGG | + | chr4.4:22998221-22998240 | None:intergenic | 10.0% |
| !! | AATTTGGATGATTATAAATT+GGG | - | chr4.4:23001327-23001346 | MS.gene32179:intron | 15.0% |
| !! | AGATATAGTTGAAATTTATA+AGG | + | chr4.4:23001533-23001552 | None:intergenic | 15.0% |
| !! | CATTGTATTATATGATAATA+TGG | - | chr4.4:22999743-22999762 | MS.gene32179:CDS | 15.0% |
| !! | GATATAGTTGAAATTTATAA+GGG | + | chr4.4:23001532-23001551 | None:intergenic | 15.0% |
| !! | TTATTGAATTGAATTGAATA+TGG | - | chr4.4:22998589-22998608 | MS.gene32179:intron | 15.0% |
| !!! | ATAATGTTTTTGATGATAAT+AGG | - | chr4.4:23001043-23001062 | MS.gene32179:intron | 15.0% |
| !!! | ATTTTTCATTCATTTTCAAA+TGG | - | chr4.4:22998913-22998932 | MS.gene32179:intron | 15.0% |
| !!! | TACTATTATGTTTCTATATT+TGG | - | chr4.4:23001281-23001300 | MS.gene32179:intron | 15.0% |
| !!! | TGTCATAGTTTTTTTTTTAT+TGG | - | chr4.4:22999034-22999053 | MS.gene32179:intron | 15.0% |
| !!! | TTTTTCATTCATTTTCAAAT+GGG | - | chr4.4:22998914-22998933 | MS.gene32179:intron | 15.0% |
| !! | AAAACTGAAAAATCAACTAA+AGG | + | chr4.4:23001014-23001033 | None:intergenic | 20.0% |
| !! | AAACTGAAAAATCAACTAAA+GGG | + | chr4.4:23001013-23001032 | None:intergenic | 20.0% |
| !! | AATAAAATCAACAGTTGAAA+AGG | + | chr4.4:22999480-22999499 | None:intergenic | 20.0% |
| !! | ATACAACAAATTGAATAAAG+TGG | + | chr4.4:22998730-22998749 | None:intergenic | 20.0% |
| !! | ATCATTATTAAACACCAATT+TGG | - | chr4.4:23001311-23001330 | MS.gene32179:intron | 20.0% |
| !! | ATTTAACTCGTTATAATAGA+GGG | + | chr4.4:22998363-22998382 | None:intergenic | 20.0% |
| !! | CAATTTATAATCATCCAAAT+TGG | + | chr4.4:23001328-23001347 | None:intergenic | 20.0% |
| !! | CAATTTGGATGATTATAAAT+TGG | - | chr4.4:23001326-23001345 | MS.gene32179:intron | 20.0% |
| !! | CATTATATCATATATGCATA+TGG | - | chr4.4:22998750-22998769 | MS.gene32179:intron | 20.0% |
| !! | GTAATAATAATGTAATGCAA+CGG | + | chr4.4:22998094-22998113 | None:intergenic | 20.0% |
| !! | TATCATCAAAAACATTATTG+AGG | + | chr4.4:23001041-23001060 | None:intergenic | 20.0% |
| !! | TATTAAAGATGAAATGCAAA+TGG | + | chr4.4:23001084-23001103 | None:intergenic | 20.0% |
| !! | TGCATTACATTATTATTACA+TGG | - | chr4.4:22998095-22998114 | MS.gene32179:CDS | 20.0% |
| !!! | CAAATGTAGAAACTTTTTAT+TGG | + | chr4.4:23001470-23001489 | None:intergenic | 20.0% |
| !!! | GTTTATTTTGTTCCTAAATT+TGG | - | chr4.4:22999446-22999465 | MS.gene32179:CDS | 20.0% |
| !!! | TATTTTTTTTCTTCCACATT+AGG | - | chr4.4:23001106-23001125 | MS.gene32179:intron | 20.0% |
| !!! | TTGTTCTAAGTATTTGTTAA+CGG | - | chr4.4:22998801-22998820 | MS.gene32179:intron | 20.0% |
| !!! | TTTTCCAAAATAAGTTTGTT+TGG | + | chr4.4:23001215-23001234 | None:intergenic | 20.0% |
| !!! | TTTTCGTCAATGTAAATATA+GGG | - | chr4.4:23001575-23001594 | MS.gene32179:intron | 20.0% |
| !!! | TTTTTCGTCAATGTAAATAT+AGG | - | chr4.4:23001574-23001593 | MS.gene32179:intron | 20.0% |
| ! | AAATGAAGGAAAAGAAAAGA+CGG | - | chr4.4:23002321-23002340 | MS.gene32179:CDS | 25.0% |
| ! | ACAAAATAAACCTAACAAGA+AGG | + | chr4.4:22999437-22999456 | None:intergenic | 25.0% |
| ! | ACAAACATTTCTAAGTTCTA+AGG | - | chr4.4:22999168-22999187 | MS.gene32179:intron | 25.0% |
| ! | ACATTAGGCAATGAAAAATT+TGG | - | chr4.4:23001121-23001140 | MS.gene32179:intron | 25.0% |
| ! | AGAAATCAGAAGATTCAATT+GGG | - | chr4.4:22999831-22999850 | MS.gene32179:CDS | 25.0% |
| ! | AGATTCAAACCAAGAATAAA+AGG | + | chr4.4:23001615-23001634 | None:intergenic | 25.0% |
| ! | AGTGGAATATTATATTACCT+CGG | + | chr4.4:22997977-22997996 | None:intergenic | 25.0% |
| ! | AGTTTAATGAATTGTCAATC+AGG | + | chr4.4:22998125-22998144 | None:intergenic | 25.0% |
| ! | ATAACTTAGCATAGTAATTG+AGG | + | chr4.4:22998989-22999008 | None:intergenic | 25.0% |
| ! | ATTACTATGCTAAGTTATGT+TGG | - | chr4.4:22998991-22999010 | MS.gene32179:intron | 25.0% |
| ! | ATTCAAAACTTTCTCATGTT+CGG | + | chr4.4:23000380-23000399 | None:intergenic | 25.0% |
| ! | CTAAATCTCAATTGTTTCAT+AGG | - | chr4.4:22999131-22999150 | MS.gene32179:intron | 25.0% |
| ! | GAAATAAAGAATGATAAGAG+TGG | + | chr4.4:22999375-22999394 | None:intergenic | 25.0% |
| ! | GATTTAACTCGTTATAATAG+AGG | + | chr4.4:22998364-22998383 | None:intergenic | 25.0% |
| ! | TACAATGAGATATACTATAC+AGG | + | chr4.4:22999730-22999749 | None:intergenic | 25.0% |
| ! | TATTGTCAAAGAAAAACTGA+CGG | - | chr4.4:23002025-23002044 | MS.gene32179:intron | 25.0% |
| ! | TCGTAAACAATTTCAAAAGT+AGG | + | chr4.4:23001746-23001765 | None:intergenic | 25.0% |
| ! | TTATTATTGCTCACATTCTT+CGG | + | chr4.4:22998529-22998548 | None:intergenic | 25.0% |
| ! | TTCATTTCCTTCATAAGATT+CGG | + | chr4.4:23002308-23002327 | None:intergenic | 25.0% |
| !! | AAATTTTTCATTGCCTAATG+TGG | + | chr4.4:23001122-23001141 | None:intergenic | 25.0% |
| !! | TCTTTTGATCCTTTTATTCT+TGG | - | chr4.4:23001603-23001622 | MS.gene32179:intron | 25.0% |
| !! | TGAACCAAACAAACTTATTT+TGG | - | chr4.4:23001208-23001227 | MS.gene32179:intron | 25.0% |
| !! | TTGTTTAAATTTTCCCAACT+TGG | - | chr4.4:22999606-22999625 | MS.gene32179:CDS | 25.0% |
| !!! | AACAAAAAGAGTGTTCTATT+TGG | - | chr4.4:22998639-22998658 | MS.gene32179:intron | 25.0% |
| !!! | ACATGAAACTAGTTTTTGTT+TGG | + | chr4.4:23001251-23001270 | None:intergenic | 25.0% |
| !!! | CTTTTGAAATTGTTTACGAA+TGG | - | chr4.4:23001747-23001766 | MS.gene32179:intron | 25.0% |
| !!! | GATTCTGTTTTGGAAATTAA+AGG | - | chr4.4:23000928-23000947 | MS.gene32179:intron | 25.0% |
| !!! | TAGTGAATTATCATTTTTGC+AGG | - | chr4.4:22999505-22999524 | MS.gene32179:CDS | 25.0% |
| !!! | TTTTCCAAAATTAGTCTGTT+TGG | + | chr4.4:23001171-23001190 | None:intergenic | 25.0% |
| AAAATTGTGTTCTCTTGACA+AGG | - | chr4.4:22998474-22998493 | MS.gene32179:intron | 30.0% | |
| ACTCGCTTCATTAATATTTC+TGG | + | chr4.4:23000761-23000780 | None:intergenic | 30.0% | |
| ATATATGCATATGGTTGTTG+AGG | - | chr4.4:22998759-22998778 | MS.gene32179:intron | 30.0% | |
| ATGTGCTTAAAATAGAGGTT+TGG | + | chr4.4:22998827-22998846 | None:intergenic | 30.0% | |
| CTGTTGCAATTCTTCATATT+TGG | + | chr4.4:22999540-22999559 | None:intergenic | 30.0% | |
| GAATCTTATGAAGGAAATGA+AGG | - | chr4.4:23002307-23002326 | MS.gene32179:CDS | 30.0% | |
| GACATAATCTCAGCTTAAAA+AGG | + | chr4.4:22999879-22999898 | None:intergenic | 30.0% | |
| GAGAAATCAGAAGATTCAAT+TGG | - | chr4.4:22999830-22999849 | MS.gene32179:CDS | 30.0% | |
| GTGGAATATTATATTACCTC+GGG | + | chr4.4:22997976-22997995 | None:intergenic | 30.0% | |
| TAAATTGCAAGTCTCTATTC+TGG | - | chr4.4:22998407-22998426 | MS.gene32179:intron | 30.0% | |
| TGTGTGTAAACCTATAGATT+TGG | + | chr4.4:22999970-22999989 | None:intergenic | 30.0% | |
| TTAAAGCAATGCATGATGTA+TGG | - | chr4.4:22998616-22998635 | MS.gene32179:intron | 30.0% | |
| TTAATGAATTGTCAATCAGG+AGG | + | chr4.4:22998122-22998141 | None:intergenic | 30.0% | |
| TTCTACTAAAGAGTTGTCAA+AGG | - | chr4.4:23000237-23000256 | MS.gene32179:intron | 30.0% | |
| TTGAAAGAGACTGTATATGA+AGG | - | chr4.4:23000682-23000701 | MS.gene32179:intron | 30.0% | |
| TTTGCGTATACAATGGTTAT+GGG | - | chr4.4:22998671-22998690 | MS.gene32179:intron | 30.0% | |
| ! | ACATTAATCTTCTGGTTACA+AGG | + | chr4.4:23002128-23002147 | None:intergenic | 30.0% |
| ! | ATCAGAGTAAAAACCCATTT+TGG | - | chr4.4:22998174-22998193 | MS.gene32179:CDS | 30.0% |
| ! | CAACAAAACAATTGATTCAG+TGG | - | chr4.4:23001905-23001924 | MS.gene32179:intron | 30.0% |
| ! | CATTAATCTTCTGGTTACAA+GGG | + | chr4.4:23002127-23002146 | None:intergenic | 30.0% |
| ! | CTAACAGCTTGATTTTGTTA+GGG | - | chr4.4:22998383-22998402 | MS.gene32179:intron | 30.0% |
| ! | CTCTATTCTGGCTATTAATT+CGG | - | chr4.4:22998419-22998438 | MS.gene32179:intron | 30.0% |
| ! | TAACTGTACATCTTTGTTTC+AGG | - | chr4.4:23000086-23000105 | MS.gene32179:intron | 30.0% |
| ! | TCTAACAGCTTGATTTTGTT+AGG | - | chr4.4:22998382-22998401 | MS.gene32179:intron | 30.0% |
| ! | TGAACCAAACAGACTAATTT+TGG | - | chr4.4:23001164-23001183 | MS.gene32179:intron | 30.0% |
| ! | TTTTGCGTATACAATGGTTA+TGG | - | chr4.4:22998670-22998689 | MS.gene32179:intron | 30.0% |
| !! | AAACCTCTATTTTAAGCACA+TGG | - | chr4.4:22998826-22998845 | MS.gene32179:intron | 30.0% |
| !! | ATTTTTCAATTGATGTGTCC+CGG | - | chr4.4:23000794-23000813 | MS.gene32179:intron | 30.0% |
| !!! | AGTTCTAAGGAACTTTTCAT+TGG | - | chr4.4:22999181-22999200 | MS.gene32179:intron | 30.0% |
| !!! | ATGGAGGGTGTTTTAAAAAA+AGG | - | chr4.4:23000707-23000726 | MS.gene32179:intron | 30.0% |
| AAAAAGATGTACTGCCAAGT+TGG | + | chr4.4:22999623-22999642 | None:intergenic | 35.0% | |
| AAAAGAAAAGACGGAGAACT+AGG | - | chr4.4:23002330-23002349 | MS.gene32179:CDS | 35.0% | |
| AAAAGATGTACTGCCAAGTT+GGG | + | chr4.4:22999622-22999641 | None:intergenic | 35.0% | |
| AAAGATGGTGTATAACCATG+TGG | - | chr4.4:22999229-22999248 | MS.gene32179:CDS | 35.0% | |
| AACACGAACTTGAAAAAGGA+TGG | - | chr4.4:23000880-23000899 | MS.gene32179:intron | 35.0% | |
| AAGCCATGTGCTTAAAATAG+AGG | + | chr4.4:22998832-22998851 | None:intergenic | 35.0% | |
| AAGGCATGTGTTCCAAATTT+AGG | + | chr4.4:22999461-22999480 | None:intergenic | 35.0% | |
| AATAGAGGGACTAATGTGTT+CGG | + | chr4.4:22998349-22998368 | None:intergenic | 35.0% | |
| ACATGGACTTTGACACTATA+AGG | - | chr4.4:23001871-23001890 | MS.gene32179:intron | 35.0% | |
| ACATGTTCCTTCACAGAAAT+TGG | - | chr4.4:23000474-23000493 | MS.gene32179:intron | 35.0% | |
| ACTAAAGAGTTGTCAAAGGA+TGG | - | chr4.4:23000241-23000260 | MS.gene32179:intron | 35.0% | |
| ACTCTCTCTAATTTCTGTGA+AGG | + | chr4.4:23000211-23000230 | None:intergenic | 35.0% | |
| AGATTTCTATGATCCACTGT+TGG | - | chr4.4:23000040-23000059 | MS.gene32179:CDS | 35.0% | |
| ATGATAATATGGCACTGCTA+GGG | - | chr4.4:22999754-22999773 | MS.gene32179:CDS | 35.0% | |
| CCAGAAGATTAATGTTGCAA+AGG | - | chr4.4:23002133-23002152 | MS.gene32179:intron | 35.0% | |
| CCTTTGCAACATTAATCTTC+TGG | + | chr4.4:23002136-23002155 | None:intergenic | 35.0% | |
| CTAAAGAGTTGTCAAAGGAT+GGG | - | chr4.4:23000242-23000261 | MS.gene32179:intron | 35.0% | |
| GAAATGTCGACCAAATCTAT+AGG | - | chr4.4:22999957-22999976 | MS.gene32179:CDS | 35.0% | |
| GTAGTGCAGACTTATATTGA+CGG | + | chr4.4:23001995-23002014 | None:intergenic | 35.0% | |
| TAAACCTAACAAGAAGGCTT+TGG | + | chr4.4:22999431-22999450 | None:intergenic | 35.0% | |
| TAAAGAGAATTCTCCGTCTT+CGG | - | chr4.4:23002223-23002242 | MS.gene32179:CDS | 35.0% | |
| TAGTGCAGACTTATATTGAC+GGG | + | chr4.4:23001994-23002013 | None:intergenic | 35.0% | |
| TATGATAATATGGCACTGCT+AGG | - | chr4.4:22999753-22999772 | MS.gene32179:CDS | 35.0% | |
| TCATTGAGACATAAACCACA+TGG | + | chr4.4:22999298-22999317 | None:intergenic | 35.0% | |
| TGCAAATGGCAATAAACTAG+TGG | + | chr4.4:23001070-23001089 | None:intergenic | 35.0% | |
| TGTGAAGGAACATCTAATTC+TGG | + | chr4.4:23000196-23000215 | None:intergenic | 35.0% | |
| TTACACATCAAGAAAGCTGT+CGG | - | chr4.4:23002254-23002273 | MS.gene32179:CDS | 35.0% | |
| TTCAACTAAAGAGACGTCAA+AGG | - | chr4.4:23000510-23000529 | MS.gene32179:intron | 35.0% | |
| TTCATGAGACCAGTTTGTAT+CGG | + | chr4.4:23000296-23000315 | None:intergenic | 35.0% | |
| TTTATGTCTCAATGAGTGTG+CGG | - | chr4.4:22999303-22999322 | MS.gene32179:CDS | 35.0% | |
| ! | AACGTGTTTTGCGTATACAA+TGG | - | chr4.4:22998664-22998683 | MS.gene32179:intron | 35.0% |
| ! | ATAAGTTGACAGATACAGCT+GGG | - | chr4.4:23000404-23000423 | MS.gene32179:intron | 35.0% |
| ! | ATCCACTGTTGGATTTTCAT+CGG | - | chr4.4:23000051-23000070 | MS.gene32179:CDS | 35.0% |
| ! | ATTCTTGAGACCAGTTTTTC+TGG | + | chr4.4:23000570-23000589 | None:intergenic | 35.0% |
| ! | GGCGATTTTAGATTCTGTTT+TGG | - | chr4.4:23000918-23000937 | MS.gene32179:intron | 35.0% |
| ! | TGCTACTTACATTGATGAGA+TGG | - | chr4.4:22999341-22999360 | MS.gene32179:CDS | 35.0% |
| ! | TTCTTGAGACCAGTTTTTCT+GGG | + | chr4.4:23000569-23000588 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTAA+AGG | + | chr4.4:23001508-23001527 | None:intergenic | 35.0% |
| !! | ACTCATTAACTTGTGCCTTT+AGG | - | chr4.4:23001490-23001509 | MS.gene32179:intron | 35.0% |
| !! | CATGTTAACTTGTGTCCTAA+GGG | - | chr4.4:23001351-23001370 | MS.gene32179:intron | 35.0% |
| !! | CTCATTAACTTGTGCCTTTA+GGG | - | chr4.4:23001491-23001510 | MS.gene32179:intron | 35.0% |
| !! | TCATGTTAACTTGTGTCCTA+AGG | - | chr4.4:23001350-23001369 | MS.gene32179:intron | 35.0% |
| !! | TCTATTTTAAGCACATGGCT+TGG | - | chr4.4:22998831-22998850 | MS.gene32179:intron | 35.0% |
| !!! | GGGTGTTTTAAAAAAAGGAG+AGG | - | chr4.4:23000712-23000731 | MS.gene32179:intron | 35.0% |
| !!! | TGTTGGATTTTCATCGGTTT+GGG | - | chr4.4:23000057-23000076 | MS.gene32179:CDS | 35.0% |
| AAAGGAGAGGAAAGAGAAAG+AGG | - | chr4.4:23000725-23000744 | MS.gene32179:intron | 40.0% | |
| AACCGATGAAAATCCAACAG+TGG | + | chr4.4:23000056-23000075 | None:intergenic | 40.0% | |
| AAGAAAAACTGACGGAGAAC+AGG | - | chr4.4:23002033-23002052 | MS.gene32179:intron | 40.0% | |
| AAGTGGCGAACCAAAACAAT+TGG | + | chr4.4:22998713-22998732 | None:intergenic | 40.0% | |
| ACACTTGGGACTTTCAAAGA+AGG | + | chr4.4:23002101-23002120 | None:intergenic | 40.0% | |
| ACCAACAATCACAAACCACA+TGG | + | chr4.4:22999247-22999266 | None:intergenic | 40.0% | |
| ACTAAAGAGACGTCAAAGGA+TGG | - | chr4.4:23000514-23000533 | MS.gene32179:intron | 40.0% | |
| ACTCTCTCCAATTTCTGTGA+AGG | + | chr4.4:23000484-23000503 | None:intergenic | 40.0% | |
| ACTGTATATGAAGGACATGG+AGG | - | chr4.4:23000691-23000710 | MS.gene32179:intron | 40.0% | |
| ATCAAAGCTTGAATCCCTCA+AGG | - | chr4.4:23000117-23000136 | MS.gene32179:intron | 40.0% | |
| ATCAACTAAAGGGAGTGAAC+AGG | + | chr4.4:23001003-23001022 | None:intergenic | 40.0% | |
| ATGTCTTCAGAAGACATTGC+TGG | + | chr4.4:23000328-23000347 | None:intergenic | 40.0% | |
| ATTGCTTAACATGTGCCCTT+AGG | + | chr4.4:23001369-23001388 | None:intergenic | 40.0% | |
| CAAATCTTCTGGTGTAACTG+AGG | - | chr4.4:23000855-23000874 | MS.gene32179:intron | 40.0% | |
| CAAGAGCAAAGGACCAAAAT+GGG | + | chr4.4:22998190-22998209 | None:intergenic | 40.0% | |
| CACATCAAACCCAGAAAAAC+TGG | - | chr4.4:23000557-23000576 | MS.gene32179:intron | 40.0% | |
| CACATCAAACCGATACAAAC+TGG | - | chr4.4:23000284-23000303 | MS.gene32179:intron | 40.0% | |
| CTAAAGAGACGTCAAAGGAT+GGG | - | chr4.4:23000515-23000534 | MS.gene32179:intron | 40.0% | |
| CTGTATATGAAGGACATGGA+GGG | - | chr4.4:23000692-23000711 | MS.gene32179:intron | 40.0% | |
| CTTGTTGACAACAACTCAGT+TGG | - | chr4.4:23000169-23000188 | MS.gene32179:intron | 40.0% | |
| GACAGCTTTCTTGATGTGTA+AGG | + | chr4.4:23002255-23002274 | None:intergenic | 40.0% | |
| GAGACTGTATATGAAGGACA+TGG | - | chr4.4:23000688-23000707 | MS.gene32179:intron | 40.0% | |
| GGAGAACACGAACTTGAAAA+AGG | - | chr4.4:23000876-23000895 | MS.gene32179:intron | 40.0% | |
| GGATGGAACGAAATATCTGA+TGG | - | chr4.4:23000897-23000916 | MS.gene32179:intron | 40.0% | |
| TATGCATATGGTTGTTGAGG+TGG | - | chr4.4:22998762-22998781 | MS.gene32179:intron | 40.0% | |
| TATGCCAAAGCCTTCTTGTT+AGG | - | chr4.4:22999424-22999443 | MS.gene32179:CDS | 40.0% | |
| TATTACCTCGGGTGTAATAG+CGG | + | chr4.4:22997965-22997984 | None:intergenic | 40.0% | |
| TCAGAGTCTCTATAACCATG+TGG | - | chr4.4:22999280-22999299 | MS.gene32179:CDS | 40.0% | |
| TCTTTACTACCACCAGTACT+AGG | + | chr4.4:23002209-23002228 | None:intergenic | 40.0% | |
| TGCAACTCCGAATCTTATGA+AGG | - | chr4.4:23002298-23002317 | MS.gene32179:CDS | 40.0% | |
| TGGTAGAACTTTCTTTCAGC+CGG | + | chr4.4:23000816-23000835 | None:intergenic | 40.0% | |
| TGTAAGGATTTCACCGAAGA+CGG | + | chr4.4:23002239-23002258 | None:intergenic | 40.0% | |
| TGTGAAGGAACATGTGATTC+TGG | + | chr4.4:23000469-23000488 | None:intergenic | 40.0% | |
| TTCATAAGATTCGGAGTTGC+AGG | + | chr4.4:23002299-23002318 | None:intergenic | 40.0% | |
| ! | ACCATGTGGTTTGTGATTGT+TGG | - | chr4.4:22999243-22999262 | MS.gene32179:CDS | 40.0% |
| ! | AGAACACGAGCATGTGTTTT+AGG | + | chr4.4:22998861-22998880 | None:intergenic | 40.0% |
| ! | AGCAATGTCTTCTGAAGACA+TGG | - | chr4.4:23000327-23000346 | MS.gene32179:intron | 40.0% |
| ! | CAGGATCTTTTACACATACC+TGG | + | chr4.4:23000984-23001003 | None:intergenic | 40.0% |
| ! | CTTATATTGACGGGTGTTCT+TGG | + | chr4.4:23001985-23002004 | None:intergenic | 40.0% |
| ! | GATAAGTTGACAGATACAGC+TGG | - | chr4.4:23000403-23000422 | MS.gene32179:intron | 40.0% |
| ! | GTAGAGATTTGCTCAAGGAA+TGG | - | chr4.4:23001773-23001792 | MS.gene32179:intron | 40.0% |
| ! | TAATCTTCTGGTTACAAGGG+CGG | + | chr4.4:23002124-23002143 | None:intergenic | 40.0% |
| !! | CATTTTGGTCCTTTGCTCTT+GGG | - | chr4.4:22998189-22998208 | MS.gene32179:CDS | 40.0% |
| !! | CTGTTGGATTTTCATCGGTT+TGG | - | chr4.4:23000056-23000075 | MS.gene32179:CDS | 40.0% |
| AAAAACTGACGGAGAACAGG+AGG | - | chr4.4:23002036-23002055 | MS.gene32179:intron | 45.0% | |
| AAAGCCAAGAAGCCTAGTAC+TGG | - | chr4.4:23002194-23002213 | MS.gene32179:intron | 45.0% | |
| AAGTGTCATGCTGTCTTTCG+AGG | + | chr4.4:22999669-22999688 | None:intergenic | 45.0% | |
| AATGTTGCAAAGGTAGCCGA+TGG | - | chr4.4:23002143-23002162 | MS.gene32179:intron | 45.0% | |
| AGATTACGCCTGGTGTTTCA+GGG | - | chr4.4:23000623-23000642 | MS.gene32179:CDS | 45.0% | |
| AGTGTCATGCTGTCTTTCGA+GGG | + | chr4.4:22999668-22999687 | None:intergenic | 45.0% | |
| CAGAAGACATTGCTGGAACT+TGG | + | chr4.4:23000594-23000613 | None:intergenic | 45.0% | |
| CCAAGAGCAAAGGACCAAAA+TGG | + | chr4.4:22998191-22998210 | None:intergenic | 45.0% | |
| CTCATTCTTGTCAGCCTTGA+GGG | + | chr4.4:23000134-23000153 | None:intergenic | 45.0% | |
| GAAAGTTCTACCAGCAACTG+TGG | - | chr4.4:23000823-23000842 | MS.gene32179:intron | 45.0% | |
| GAATTGCAACAGCGCTATTC+AGG | - | chr4.4:22999548-22999567 | MS.gene32179:CDS | 45.0% | |
| GAGAGGAAAGAGAAAGAGGA+AGG | - | chr4.4:23000729-23000748 | MS.gene32179:intron | 45.0% | |
| GCAGTTAATCCAGAGACACA+TGG | - | chr4.4:23001854-23001873 | MS.gene32179:intron | 45.0% | |
| GGAGTAGAACAGCAAAGCAT+TGG | + | chr4.4:23001964-23001983 | None:intergenic | 45.0% | |
| GGTAGAACTTTCTTTCAGCC+GGG | + | chr4.4:23000815-23000834 | None:intergenic | 45.0% | |
| GGTGAGGTTGTCAAATCTTC+TGG | - | chr4.4:23000844-23000863 | MS.gene32179:intron | 45.0% | |
| GTTTAGACCCACATTCTGAC+TGG | - | chr4.4:22998501-22998520 | MS.gene32179:intron | 45.0% | |
| TCAATAGACCCTGAAACACC+AGG | + | chr4.4:23000361-23000380 | None:intergenic | 45.0% | |
| TCTCATTCTTGTCAGCCTTG+AGG | + | chr4.4:23000135-23000154 | None:intergenic | 45.0% | |
| TGTCAAAGTCCATGTGTCTC+TGG | + | chr4.4:23001866-23001885 | None:intergenic | 45.0% | |
| TTCGGTTCCAGTCAGAATGT+GGG | + | chr4.4:22998511-22998530 | None:intergenic | 45.0% | |
| TTCTTGGTGGAGCTGTTATC+CGG | - | chr4.4:22997878-22997897 | MS.gene32179:CDS | 45.0% | |
| ! | AAACTGGTCTCATGAATGCC+AGG | - | chr4.4:23000300-23000319 | MS.gene32179:intron | 45.0% |
| !! | CCATTTTGGTCCTTTGCTCT+TGG | - | chr4.4:22998188-22998207 | MS.gene32179:CDS | 45.0% |
| !! | GTAGAACAGCAAAGCATTGG+TGG | + | chr4.4:23001961-23001980 | None:intergenic | 45.0% |
| !! | TCAAAGGATGGGTTATCTGC+TGG | - | chr4.4:23000526-23000545 | MS.gene32179:intron | 45.0% |
| !! | TCACGTGGTGCCAATTGTTT+TGG | - | chr4.4:22998700-22998719 | MS.gene32179:intron | 45.0% |
| !! | ATAATAAATAAATAAAATAG+TGG | + | chr4.4:22997995-22998014 | None:intergenic | 5.0% |
| AAGGAGAAGGAGTTCTCCCT+CGG | + | chr4.4:22997942-22997961 | None:intergenic | 50.0% | |
| AATATGGCACTGCTAGGGCT+TGG | - | chr4.4:22999759-22999778 | MS.gene32179:CDS | 50.0% | |
| ACATGGGAGGAGCTTCTTCT+TGG | - | chr4.4:22997862-22997881 | MS.gene32179:CDS | 50.0% | |
| ACCACCAGTACTAGGCTTCT+TGG | + | chr4.4:23002201-23002220 | None:intergenic | 50.0% | |
| AGATCTCGCCTGGTGTTTCA+GGG | - | chr4.4:23000350-23000369 | MS.gene32179:CDS | 50.0% | |
| AGCAGAGCTTAAGCGAGCTT+TGG | - | chr4.4:22999808-22999827 | MS.gene32179:CDS | 50.0% | |
| AGCGGAAGTGATTGTGACGT+GGG | - | chr4.4:22997837-22997856 | MS.gene32179:CDS | 50.0% | |
| CACATCAAGAAAGCTGTCGG+TGG | - | chr4.4:23002257-23002276 | MS.gene32179:CDS | 50.0% | |
| CAGAAGACATTGCTGGAACC+TGG | + | chr4.4:23000321-23000340 | None:intergenic | 50.0% | |
| CTGTCGTAAGCATGATAGCC+AGG | - | chr4.4:23000963-23000982 | MS.gene32179:intron | 50.0% | |
| CTTCGGTTCCAGTCAGAATG+TGG | + | chr4.4:22998512-22998531 | None:intergenic | 50.0% | |
| GAAGACATGGAGATTACGCC+TGG | - | chr4.4:23000613-23000632 | MS.gene32179:intron | 50.0% | |
| GAGATTACGCCTGGTGTTTC+AGG | - | chr4.4:23000622-23000641 | MS.gene32179:CDS | 50.0% | |
| GGTTATGGGTAGCATTCACG+TGG | - | chr4.4:22998685-22998704 | MS.gene32179:intron | 50.0% | |
| TGGTCCTTTGCTCTTGGGTT+TGG | - | chr4.4:22998194-22998213 | MS.gene32179:CDS | 50.0% | |
| TTCTACCAGCAACTGTGGTG+AGG | - | chr4.4:23000828-23000847 | MS.gene32179:intron | 50.0% | |
| ! | GGCGAGTAGAGATTTGCTCA+AGG | - | chr4.4:23001768-23001787 | MS.gene32179:intron | 50.0% |
| ! | GGTGTAATAGCGGAAGGAGA+AGG | + | chr4.4:22997955-22997974 | None:intergenic | 50.0% |
| !! | CAAAGGATGGGCTATCTGCT+GGG | - | chr4.4:23000254-23000273 | MS.gene32179:intron | 50.0% |
| !! | TCAAAGGATGGGCTATCTGC+TGG | - | chr4.4:23000253-23000272 | MS.gene32179:intron | 50.0% |
| CGGAAGTGATTGTGACGTGG+GGG | - | chr4.4:22997839-22997858 | MS.gene32179:CDS | 55.0% | |
| GAAGACATGGAGATCTCGCC+TGG | - | chr4.4:23000340-23000359 | MS.gene32179:CDS | 55.0% | |
| GACAACCTCACCACAGTTGC+TGG | + | chr4.4:23000836-23000855 | None:intergenic | 55.0% | |
| GAGATCTCGCCTGGTGTTTC+AGG | - | chr4.4:23000349-23000368 | MS.gene32179:CDS | 55.0% | |
| GAGCGGAAGTGATTGTGACG+TGG | - | chr4.4:22997836-22997855 | MS.gene32179:CDS | 55.0% | |
| GATTGTGACGTGGGGGACAT+GGG | - | chr4.4:22997846-22997865 | MS.gene32179:CDS | 55.0% | |
| GCGGAAGTGATTGTGACGTG+GGG | - | chr4.4:22997838-22997857 | MS.gene32179:CDS | 55.0% | |
| GGTTACAAGGGCGGACACTT+GGG | + | chr4.4:23002115-23002134 | None:intergenic | 55.0% | |
| TCCTTCCGCTATTACACCCG+AGG | - | chr4.4:22997957-22997976 | MS.gene32179:CDS | 55.0% | |
| TCGGTTGACCCTGAAACACC+AGG | + | chr4.4:23000634-23000653 | None:intergenic | 55.0% | |
| TGATTGTGACGTGGGGGACA+TGG | - | chr4.4:22997845-22997864 | MS.gene32179:CDS | 55.0% | |
| TGGGAGGAGCTTCTTCTTGG+TGG | - | chr4.4:22997865-22997884 | MS.gene32179:CDS | 55.0% | |
| TGGGCCAAACCCAAGAGCAA+AGG | + | chr4.4:22998201-22998220 | None:intergenic | 55.0% | |
| TGGTTACAAGGGCGGACACT+TGG | + | chr4.4:23002116-23002135 | None:intergenic | 55.0% | |
| ! | ACCTCGGGTGTAATAGCGGA+AGG | + | chr4.4:22997961-22997980 | None:intergenic | 55.0% |
| ! | CACTGCTAGGGCTTGGTATG+AGG | - | chr4.4:22999766-22999785 | MS.gene32179:CDS | 55.0% |
| ! | GCCAAGAAGCCTAGTACTGG+TGG | - | chr4.4:23002197-23002216 | MS.gene32179:intron | 55.0% |
| ! | TTATTTGAGACCCCCGAGGC+AGG | + | chr4.4:23002176-23002195 | None:intergenic | 55.0% |
| !! | GGCTTTATTTGAGACCCCCG+AGG | + | chr4.4:23002180-23002199 | None:intergenic | 55.0% |
| ACCAATCACCAGTGCCGTGC+CGG | + | chr4.4:22997900-22997919 | None:intergenic | 60.0% | |
| GGTGGAGCTGTTATCCGGCA+CGG | - | chr4.4:22997883-22997902 | MS.gene32179:CDS | 60.0% | |
| ! | TGGTGATTGGTCCGTCGTCG+CGG | - | chr4.4:22997909-22997928 | MS.gene32179:CDS | 60.0% |
| ATGGCAGCGATCCTGCCTCG+GGG | - | chr4.4:23002162-23002181 | MS.gene32179:intron | 65.0% | |
| CGAGGCAGGATCGCTGCCAT+CGG | + | chr4.4:23002162-23002181 | None:intergenic | 65.0% | |
| CGATGGCAGCGATCCTGCCT+CGG | - | chr4.4:23002160-23002179 | MS.gene32179:intron | 65.0% | |
| GATGGCAGCGATCCTGCCTC+GGG | - | chr4.4:23002161-23002180 | MS.gene32179:intron | 65.0% | |
| GCTGTTATCCGGCACGGCAC+TGG | - | chr4.4:22997889-22997908 | MS.gene32179:CDS | 65.0% | |
| TGTGACGTGGGGGACATGGG+AGG | - | chr4.4:22997849-22997868 | MS.gene32179:CDS | 65.0% | |
| ! | TGATTGGTCCGTCGTCGCGG+CGG | - | chr4.4:22997912-22997931 | MS.gene32179:CDS | 65.0% |
| !! | TCCGGCACGGCACTGGTGAT+TGG | - | chr4.4:22997896-22997915 | MS.gene32179:CDS | 65.0% |
| TGGCAGCGATCCTGCCTCGG+GGG | - | chr4.4:23002163-23002182 | MS.gene32179:intron | 70.0% | |
| TCGGAGCTCCGCCGCGACGA+CGG | + | chr4.4:22997923-22997942 | None:intergenic | 75.0% | |
| TCGTCGCGGCGGAGCTCCGA+GGG | - | chr4.4:22997923-22997942 | MS.gene32179:CDS | 75.0% | |
| ! | GTCGTCGCGGCGGAGCTCCG+AGG | - | chr4.4:22997922-22997941 | MS.gene32179:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22997832 | 23002358 | 22997832 | ID=MS.gene32179 |
| chr4.4 | mRNA | 22997832 | 23002358 | 22997832 | ID=MS.gene32179.t1;Parent=MS.gene32179 |
| chr4.4 | exon | 23002212 | 23002358 | 23002212 | ID=MS.gene32179.t1.exon1;Parent=MS.gene32179.t1 |
| chr4.4 | CDS | 23002212 | 23002358 | 23002212 | ID=cds.MS.gene32179.t1;Parent=MS.gene32179.t1 |
| chr4.4 | exon | 23000614 | 23000663 | 23000614 | ID=MS.gene32179.t1.exon2;Parent=MS.gene32179.t1 |
| chr4.4 | CDS | 23000614 | 23000663 | 23000614 | ID=cds.MS.gene32179.t1;Parent=MS.gene32179.t1 |
| chr4.4 | exon | 23000338 | 23000415 | 23000338 | ID=MS.gene32179.t1.exon3;Parent=MS.gene32179.t1 |
| chr4.4 | CDS | 23000338 | 23000415 | 23000338 | ID=cds.MS.gene32179.t1;Parent=MS.gene32179.t1 |
| chr4.4 | exon | 22999206 | 23000082 | 22999206 | ID=MS.gene32179.t1.exon4;Parent=MS.gene32179.t1 |
| chr4.4 | CDS | 22999206 | 23000082 | 22999206 | ID=cds.MS.gene32179.t1;Parent=MS.gene32179.t1 |
| chr4.4 | exon | 22997832 | 22998353 | 22997832 | ID=MS.gene32179.t1.exon5;Parent=MS.gene32179.t1 |
| chr4.4 | CDS | 22997832 | 22998353 | 22997832 | ID=cds.MS.gene32179.t1;Parent=MS.gene32179.t1 |
| Gene Sequence |
| Protein sequence |
