Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32272.t1 | KEH19503.1 | 96.8 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.00E+00 | 1399 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32272.t1 | Q56XZ1 | 48.7 | 707 | 306 | 12 | 8 | 709 | 8 | 662 | 1.6e-177 | 624.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32272.t1 | A0A072TRN9 | 96.8 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.0e+00 | 1399.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene32272.t1 | TF | STAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32272.t1 | MTR_8g461480 | 96.761 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.0 | 1420 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32272.t1 | AT1G78540 | 48.319 | 714 | 312 | 12 | 1 | 709 | 1 | 662 | 0.0 | 629 |
| MS.gene32272.t1 | AT1G78540 | 48.319 | 714 | 312 | 12 | 1 | 709 | 1 | 662 | 0.0 | 629 |
| MS.gene32272.t1 | AT1G17040 | 47.273 | 715 | 291 | 10 | 1 | 709 | 1 | 635 | 0.0 | 620 |
| MS.gene32272.t1 | AT1G17040 | 46.759 | 725 | 290 | 11 | 1 | 709 | 1 | 645 | 0.0 | 612 |
| MS.gene32272.t1 | AT1G78540 | 47.453 | 687 | 304 | 12 | 1 | 682 | 1 | 635 | 0.0 | 592 |
| MS.gene32272.t1 | AT1G17040 | 46.512 | 688 | 282 | 10 | 1 | 682 | 1 | 608 | 0.0 | 587 |
Find 176 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGATAATCTCCTAATTT+TGG | 0.151104 | 8.3:-48864794 | None:intergenic |
| ATTTGAAGCCGAATATAATT+TGG | 0.161270 | 8.3:-48861913 | None:intergenic |
| TATATTCGGCTTCAAATTAA+TGG | 0.167300 | 8.3:+48861919 | MS.gene32272:CDS |
| ATCTCTTGGAAATTAATATT+TGG | 0.178295 | 8.3:-48870010 | None:intergenic |
| TATCAAAGATCATCATTTAA+AGG | 0.184938 | 8.3:+48862095 | MS.gene32272:CDS |
| TTCTACACCAGATTGCTTTA+TGG | 0.200489 | 8.3:-48865059 | None:intergenic |
| TTCCTTCAAATTACTTGAAT+TGG | 0.227549 | 8.3:-48861989 | None:intergenic |
| ATGAATCCTTCAATCCATTT+AGG | 0.246881 | 8.3:-48870970 | None:intergenic |
| ATTGGATTCCTTATGTAATA+AGG | 0.273022 | 8.3:-48861971 | None:intergenic |
| CAAGGAATGGGGTGGTTGTT+TGG | 0.283394 | 8.3:-48870071 | None:intergenic |
| CTTTCAATGGATCATATATA+CGG | 0.288269 | 8.3:+48871156 | MS.gene32272:CDS |
| GGAATTCCATGTCACCTAAA+TGG | 0.294593 | 8.3:+48870956 | MS.gene32272:CDS |
| TAAAAGATGGAACTAATCTT+TGG | 0.309877 | 8.3:+48870036 | MS.gene32272:CDS |
| ACAATTAGGCAACCGGCATC+TGG | 0.320701 | 8.3:-48871093 | None:intergenic |
| GATGGTGTTTGGGGCATTGT+TGG | 0.327498 | 8.3:+48862321 | MS.gene32272:CDS |
| AGGTTTGTCCAAATTATATT+CGG | 0.332939 | 8.3:+48861905 | MS.gene32272:intron |
| GTGGGGCCAGCTTCTTGAGG+TGG | 0.338393 | 8.3:-48871070 | None:intergenic |
| ATATTCGGCTTCAAATTAAT+GGG | 0.345016 | 8.3:+48861920 | MS.gene32272:CDS |
| TGCCTAATTGTTACATATGT+TGG | 0.346266 | 8.3:+48871105 | MS.gene32272:CDS |
| TCATGTATGGACTGCTAATC+AGG | 0.353019 | 8.3:+48865093 | MS.gene32272:CDS |
| CTACTTTCCATGCTATTTGA+AGG | 0.360932 | 8.3:-48867305 | None:intergenic |
| CAAATTAATGGGGAGATTGT+AGG | 0.369764 | 8.3:+48861931 | MS.gene32272:CDS |
| TCCCAACATATGTAACAATT+AGG | 0.370251 | 8.3:-48871107 | None:intergenic |
| TAAGCTGAAGGATTTATGTT+TGG | 0.371386 | 8.3:+48859411 | MS.gene32272:CDS |
| TGCCAGACAGTATTTGAAAA+TGG | 0.371618 | 8.3:-48867351 | None:intergenic |
| AGAAGAAAGTGATGGTGTTT+GGG | 0.375693 | 8.3:+48862311 | MS.gene32272:CDS |
| GCCTAATTGTTACATATGTT+GGG | 0.381610 | 8.3:+48871106 | MS.gene32272:CDS |
| AGCAATTGATGACGTGTCAT+TGG | 0.386972 | 8.3:+48864937 | MS.gene32272:CDS |
| CACGGACCCATGCAAGTAAC+AGG | 0.388052 | 8.3:-48861134 | None:intergenic |
| AAGAAGAAAGTGATGGTGTT+TGG | 0.389600 | 8.3:+48862310 | MS.gene32272:CDS |
| TCCAAGAGATTGATAAAAGA+TGG | 0.391572 | 8.3:+48870023 | MS.gene32272:CDS |
| GGGACTGGGTAAATGCTATC+TGG | 0.392153 | 8.3:+48870935 | MS.gene32272:CDS |
| CAAATACTGTCTGGCAGGCT+TGG | 0.395074 | 8.3:+48867358 | MS.gene32272:CDS |
| GAACCTGAGCTGTCCCGTTT+GGG | 0.400255 | 8.3:+48872065 | MS.gene32272:CDS |
| AACGAGAAAAGGAGCACTTT+CGG | 0.402504 | 8.3:-48861054 | None:intergenic |
| TAGAGAACTTTGAGAAGTTA+TGG | 0.403203 | 8.3:+48870878 | MS.gene32272:CDS |
| TAATTTGAAGGAAATACATT+TGG | 0.404039 | 8.3:+48861999 | MS.gene32272:CDS |
| TCATTGGAAAGTATGAATTC+TGG | 0.407411 | 8.3:+48864953 | MS.gene32272:CDS |
| AGAACCTGAGCTGTCCCGTT+TGG | 0.407753 | 8.3:+48872064 | MS.gene32272:CDS |
| CCCTACCACCATTCTTCATC+AGG | 0.410674 | 8.3:+48859501 | MS.gene32272:CDS |
| TGGGGCCAGCTTCTTGAGGT+GGG | 0.411262 | 8.3:-48871069 | None:intergenic |
| ATTTGGACAGCCTGTTGATA+TGG | 0.412767 | 8.3:+48862892 | MS.gene32272:CDS |
| GAGATTCTAAGAAGCATTGC+GGG | 0.414323 | 8.3:+48870835 | MS.gene32272:CDS |
| TCGCCACAAACTACTTTCAA+TGG | 0.414819 | 8.3:+48871143 | MS.gene32272:CDS |
| ACCTCATTCTCCATATCAAC+AGG | 0.425279 | 8.3:-48862902 | None:intergenic |
| AATGTAATAATTCTCATGTA+TGG | 0.426139 | 8.3:+48865080 | MS.gene32272:CDS |
| TCATGAAGATTGCTTCTTGT+GGG | 0.429431 | 8.3:+48870126 | MS.gene32272:CDS |
| CAAACAACCACCCCATTCCT+TGG | 0.429564 | 8.3:+48870072 | MS.gene32272:CDS |
| GTCCGATTCGATGCATCTCC+AGG | 0.430659 | 8.3:+48864834 | MS.gene32272:CDS |
| GTCAAGATCTCTCTCTCATC+AGG | 0.431837 | 8.3:+48870148 | MS.gene32272:CDS |
| ATATAAAATTAGGTTGAGAA+TGG | 0.431848 | 8.3:+48867188 | MS.gene32272:intron |
| CTTTGATAGAAGAATCAGTA+TGG | 0.434547 | 8.3:-48862080 | None:intergenic |
| TTCCATCATAGCTAGACAAA+AGG | 0.435470 | 8.3:-48863094 | None:intergenic |
| ACTGCGCTCTTCCAAGGAAT+GGG | 0.437559 | 8.3:-48870083 | None:intergenic |
| CAAGATATCTGTATCAGTTA+AGG | 0.438887 | 8.3:+48865027 | MS.gene32272:CDS |
| AGATTGCTTTATGGTGGGGT+TGG | 0.440842 | 8.3:-48865050 | None:intergenic |
| ATACATTTGGCCAATCTTTG+TGG | 0.443552 | 8.3:+48862012 | MS.gene32272:CDS |
| GGTGTTTGGGGCATTGTTGG+TGG | 0.445924 | 8.3:+48862324 | MS.gene32272:CDS |
| AGACAAAGAAATTTCAGAGT+TGG | 0.446109 | 8.3:+48867424 | MS.gene32272:CDS |
| TGAAGCTTCTGCCTCCTCCT+TGG | 0.447893 | 8.3:-48870995 | None:intergenic |
| TATAAAATTAGGTTGAGAAT+GGG | 0.447911 | 8.3:+48867189 | MS.gene32272:intron |
| ACTACTGTCTCCACAAAGAT+TGG | 0.452536 | 8.3:-48862022 | None:intergenic |
| CTGTAGCGTGTGTAATATCC+AGG | 0.453605 | 8.3:+48870914 | MS.gene32272:CDS |
| GAGGCAGAAGCTTCACTTCA+AGG | 0.453781 | 8.3:+48871003 | MS.gene32272:CDS |
| GGGGCCAGCTTCTTGAGGTG+GGG | 0.454316 | 8.3:-48871068 | None:intergenic |
| CTGGATATTACACACGCTAC+AGG | 0.462387 | 8.3:-48870913 | None:intergenic |
| ATCCAATTCAAGTAATTTGA+AGG | 0.462536 | 8.3:+48861987 | MS.gene32272:CDS |
| TGGAGACAGTAGTGGTGTGC+AGG | 0.464205 | 8.3:+48862032 | MS.gene32272:CDS |
| ACACCAGATTGCTTTATGGT+GGG | 0.468327 | 8.3:-48865055 | None:intergenic |
| CACCAGATTGCTTTATGGTG+GGG | 0.468862 | 8.3:-48865054 | None:intergenic |
| CACTGCGCTCTTCCAAGGAA+TGG | 0.469423 | 8.3:-48870084 | None:intergenic |
| TTGGAAGAGCGCAGTGTATG+AGG | 0.470136 | 8.3:+48870091 | MS.gene32272:CDS |
| ATATGTAACAATTAGGCAAC+CGG | 0.470781 | 8.3:-48871100 | None:intergenic |
| TCCATCATAGCTAGACAAAA+GGG | 0.472581 | 8.3:-48863093 | None:intergenic |
| AAGTAGAAGATATCAAATAT+CGG | 0.473248 | 8.3:+48867322 | MS.gene32272:CDS |
| TAGGCAACCGGCATCTGGGT+GGG | 0.474931 | 8.3:-48871088 | None:intergenic |
| AGCTGGCCCCACCCAGATGC+CGG | 0.477204 | 8.3:+48871081 | MS.gene32272:CDS |
| ATGTCACCTAAATGGATTGA+AGG | 0.477650 | 8.3:+48870964 | MS.gene32272:CDS |
| TTATCGTTAATAACGAGAAA+AGG | 0.480430 | 8.3:-48861065 | None:intergenic |
| TTCTTCTTCAACCTCAGAGA+TGG | 0.482819 | 8.3:-48862295 | None:intergenic |
| TATATCCTACCTTCCCAAAC+GGG | 0.488512 | 8.3:-48872078 | None:intergenic |
| AAACCTCTTCATCAGTGGGT+TGG | 0.490109 | 8.3:-48864990 | None:intergenic |
| ACTGTCCTCCTTATTACATA+AGG | 0.490418 | 8.3:+48861963 | MS.gene32272:CDS |
| GCCTGTTGATATGGAGAATG+AGG | 0.491700 | 8.3:+48862901 | MS.gene32272:CDS |
| TTCACTTGTGTATGCTGACA+CGG | 0.492848 | 8.3:+48863034 | MS.gene32272:CDS |
| TCTTCATGTAAGTAAAGAAC+TGG | 0.493153 | 8.3:-48861107 | None:intergenic |
| TTCTTTGTCTGAAGCAGAGA+TGG | 0.494049 | 8.3:-48867411 | None:intergenic |
| GATCCATTGAAAGTAGTTTG+TGG | 0.495131 | 8.3:-48871146 | None:intergenic |
| AGGCAACCGGCATCTGGGTG+GGG | 0.497592 | 8.3:-48871087 | None:intergenic |
| CGTGTGTAATATCCAGGGAC+TGG | 0.499294 | 8.3:+48870920 | MS.gene32272:CDS |
| CTTCCCAAACGGGACAGCTC+AGG | 0.504236 | 8.3:-48872068 | None:intergenic |
| TTCAATCCATTTAGGTGACA+TGG | 0.504658 | 8.3:-48870962 | None:intergenic |
| GAAGCTTCACTTCAAGGTCC+AGG | 0.505329 | 8.3:+48871009 | MS.gene32272:CDS |
| AACCCCACCATAAAGCAATC+TGG | 0.505462 | 8.3:+48865052 | MS.gene32272:CDS |
| TTCATGAAGATTGCTTCTTG+TGG | 0.506672 | 8.3:+48870125 | MS.gene32272:CDS |
| ATATATCCTACCTTCCCAAA+CGG | 0.509245 | 8.3:-48872079 | None:intergenic |
| TGGCACAGGCATCTTGTCGC+AGG | 0.510165 | 8.3:+48862837 | MS.gene32272:intron |
| AGATGGAACTAATCTTTGGC+TGG | 0.511285 | 8.3:+48870040 | MS.gene32272:CDS |
| CTGAATCATCAGAGAGTACA+GGG | 0.512336 | 8.3:+48867270 | MS.gene32272:CDS |
| TGGGTGGGGCCAGCTTCTTG+AGG | 0.513111 | 8.3:-48871073 | None:intergenic |
| TACACCAGATTGCTTTATGG+TGG | 0.513234 | 8.3:-48865056 | None:intergenic |
| GAAGCTCCTGTTACTTGCAT+GGG | 0.514189 | 8.3:+48861128 | MS.gene32272:CDS |
| TCATCAGTTGTATTCTCGAC+TGG | 0.514337 | 8.3:-48863062 | None:intergenic |
| GTCGTGCATCATTTAAGCTC+AGG | 0.517134 | 8.3:+48863159 | MS.gene32272:CDS |
| GGTTCCCCACCTCAAGAAGC+TGG | 0.518481 | 8.3:+48871064 | MS.gene32272:CDS |
| ATTTAAGCTCAGGATATCTC+AGG | 0.523956 | 8.3:+48863169 | MS.gene32272:CDS |
| CAAAATTATCCACGCTGGTG+TGG | 0.527759 | 8.3:+48864867 | MS.gene32272:CDS |
| CCACGTTCTTGAAATCCTCC+TGG | 0.528277 | 8.3:-48871027 | None:intergenic |
| AAACCAACCCACTGATGAAG+AGG | 0.534477 | 8.3:+48864987 | MS.gene32272:CDS |
| TCATACACTGCGCTCTTCCA+AGG | 0.536339 | 8.3:-48870089 | None:intergenic |
| TTTCATCCAAGTGTGATAGC+AGG | 0.537892 | 8.3:+48864747 | MS.gene32272:CDS |
| TCTGAATCATCAGAGAGTAC+AGG | 0.539016 | 8.3:+48867269 | MS.gene32272:CDS |
| CAATTAGGCAACCGGCATCT+GGG | 0.539070 | 8.3:-48871092 | None:intergenic |
| AGAAGAGACCTGATGAAGAA+TGG | 0.539342 | 8.3:-48859509 | None:intergenic |
| CTCCTGGAGATGCATCGAAT+CGG | 0.542203 | 8.3:-48864836 | None:intergenic |
| ACTTTGAGAAGTTATGGTGC+TGG | 0.543644 | 8.3:+48870884 | MS.gene32272:CDS |
| GGTTACGTGCACAATTATGA+AGG | 0.543693 | 8.3:+48862054 | MS.gene32272:CDS |
| CGGGTGTTTGTCTGAAGGAA+AGG | 0.544681 | 8.3:-48864812 | None:intergenic |
| CTGTTACTTGCATGGGTCCG+TGG | 0.547107 | 8.3:+48861135 | MS.gene32272:CDS |
| AGAAGCTCCTGTTACTTGCA+TGG | 0.548585 | 8.3:+48861127 | MS.gene32272:CDS |
| AAGAATGGTGGTAGGGAATG+TGG | 0.550704 | 8.3:-48859494 | None:intergenic |
| GCCAGCAGCATATCTTGCAA+TGG | 0.551410 | 8.3:-48872041 | None:intergenic |
| GATAGCATTTACCCAGTCCC+TGG | 0.552763 | 8.3:-48870932 | None:intergenic |
| CTTCTTCAAAGTTAAGAGAT+CGG | 0.555555 | 8.3:-48867232 | None:intergenic |
| TCACTTGTGTATGCTGACAC+GGG | 0.556831 | 8.3:+48863035 | MS.gene32272:CDS |
| TTTCAGGATGTTCCCACCAC+AGG | 0.559339 | 8.3:+48867465 | MS.gene32272:CDS |
| CTCTAAACCTCTTCATCAGT+GGG | 0.562428 | 8.3:-48864994 | None:intergenic |
| GAACAACCTGCTATCACACT+TGG | 0.566917 | 8.3:-48864753 | None:intergenic |
| ACCATTGCAAGATATGCTGC+TGG | 0.569191 | 8.3:+48872040 | MS.gene32272:CDS |
| AAATTCACCTTCAAATAGCA+TGG | 0.570364 | 8.3:+48867298 | MS.gene32272:CDS |
| ACCTGATGAAGAATGGTGGT+AGG | 0.572507 | 8.3:-48859502 | None:intergenic |
| AGGATTCATCACCAAGGAGG+AGG | 0.573700 | 8.3:+48870984 | MS.gene32272:CDS |
| TTTCAATGGATCATATATAC+GGG | 0.575038 | 8.3:+48871157 | MS.gene32272:CDS |
| GTACTCTCTGATGATTCAGA+TGG | 0.580613 | 8.3:-48867266 | None:intergenic |
| CGCTCTTCCAAGGAATGGGG+TGG | 0.581585 | 8.3:-48870079 | None:intergenic |
| GTGTGTAATATCCAGGGACT+GGG | 0.582085 | 8.3:+48870921 | MS.gene32272:CDS |
| CCTGATGAAGAATGGTGGTA+GGG | 0.582325 | 8.3:-48859501 | None:intergenic |
| TCATCTATTGATAACTTCAG+AGG | 0.582464 | 8.3:-48862267 | None:intergenic |
| TTAGGCAACCGGCATCTGGG+TGG | 0.584004 | 8.3:-48871089 | None:intergenic |
| TGGAGATGCATCGAATCGGA+CGG | 0.584719 | 8.3:-48864832 | None:intergenic |
| TCTATTGATAACTTCAGAGG+AGG | 0.585690 | 8.3:-48862264 | None:intergenic |
| CTGATGAAGAGGTTTAGAGT+TGG | 0.586232 | 8.3:+48864998 | MS.gene32272:CDS |
| GGAGATGCATCGAATCGGAC+GGG | 0.587647 | 8.3:-48864831 | None:intergenic |
| CTGAGCTGTCCCGTTTGGGA+AGG | 0.595895 | 8.3:+48872069 | MS.gene32272:CDS |
| CACTTGTGTATGCTGACACG+GGG | 0.600002 | 8.3:+48863036 | MS.gene32272:CDS |
| TTGGAACACAAAATCTGATG+AGG | 0.600332 | 8.3:-48864775 | None:intergenic |
| TCGGACGGGTGTTTGTCTGA+AGG | 0.602563 | 8.3:-48864817 | None:intergenic |
| TGGATATTACACACGCTACA+GGG | 0.607476 | 8.3:-48870912 | None:intergenic |
| CAATGCTTCTTAGAATCTCA+AGG | 0.610813 | 8.3:-48870831 | None:intergenic |
| CTATTGATAACTTCAGAGGA+GGG | 0.614350 | 8.3:-48862263 | None:intergenic |
| TATTCGGCTTCAAATTAATG+GGG | 0.619662 | 8.3:+48861921 | MS.gene32272:CDS |
| ACTCTAAACCTCTTCATCAG+TGG | 0.621417 | 8.3:-48864995 | None:intergenic |
| ATGAAATGAGAAAGAACGAA+GGG | 0.622953 | 8.3:+48859383 | MS.gene32272:CDS |
| ATGGGTTCATGTTGGATGTG+AGG | 0.626398 | 8.3:+48861205 | MS.gene32272:CDS |
| TCAAAATCAACAGTAACATG+TGG | 0.626757 | 8.3:-48861167 | None:intergenic |
| GGATTCCTTATGTAATAAGG+AGG | 0.628453 | 8.3:-48861968 | None:intergenic |
| CGAAGGGTACTGTAAGCTGA+AGG | 0.628955 | 8.3:+48859399 | MS.gene32272:CDS |
| ACATGTGGAACTTCTGTCCA+CGG | 0.629914 | 8.3:-48861152 | None:intergenic |
| TGAGATTCTAAGAAGCATTG+CGG | 0.636449 | 8.3:+48870834 | MS.gene32272:CDS |
| GATGAAATGAGAAAGAACGA+AGG | 0.636636 | 8.3:+48859382 | MS.gene32272:CDS |
| AATCTTTGTGGAGACAGTAG+TGG | 0.646760 | 8.3:+48862024 | MS.gene32272:CDS |
| CCAGGAGGATTTCAAGAACG+TGG | 0.650281 | 8.3:+48871027 | MS.gene32272:CDS |
| CTGCGCTCTTCCAAGGAATG+GGG | 0.656673 | 8.3:-48870082 | None:intergenic |
| AGAGACCTGATGAAGAATGG+TGG | 0.671372 | 8.3:-48859506 | None:intergenic |
| GGAGACAGTAGTGGTGTGCA+GGG | 0.672818 | 8.3:+48862033 | MS.gene32272:CDS |
| GAAGAAAGTGATGGTGTTTG+GGG | 0.673785 | 8.3:+48862312 | MS.gene32272:CDS |
| CCATCATAGCTAGACAAAAG+GGG | 0.681924 | 8.3:-48863092 | None:intergenic |
| TGTAGCGTGTGTAATATCCA+GGG | 0.688612 | 8.3:+48870915 | MS.gene32272:CDS |
| GAGGTTGAAGAAGAAAGTGA+TGG | 0.690505 | 8.3:+48862303 | MS.gene32272:CDS |
| TAACACAAAATTATCCACGC+TGG | 0.694520 | 8.3:+48864862 | MS.gene32272:CDS |
| AGATGAATCATCCATCTCTG+AGG | 0.696752 | 8.3:+48862284 | MS.gene32272:CDS |
| GCTTCACTTCAAGGTCCAGG+AGG | 0.697928 | 8.3:+48871012 | MS.gene32272:CDS |
| ACTTGTGTATGCTGACACGG+GGG | 0.701144 | 8.3:+48863037 | MS.gene32272:CDS |
| TGAAGGATTCATCACCAAGG+AGG | 0.729057 | 8.3:+48870981 | MS.gene32272:CDS |
| GATTGAAGGATTCATCACCA+AGG | 0.751713 | 8.3:+48870978 | MS.gene32272:CDS |
| TGAATCATCAGAGAGTACAG+GGG | 0.779447 | 8.3:+48867271 | MS.gene32272:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 48859373 | 48872404 | 48859373 | ID=MS.gene32272 |
| chr8.3 | mRNA | 48859373 | 48872404 | 48859373 | ID=MS.gene32272.t1;Parent=MS.gene32272 |
| chr8.3 | exon | 48859373 | 48859522 | 48859373 | ID=MS.gene32272.t1.exon1;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48859373 | 48859522 | 48859373 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48861038 | 48861226 | 48861038 | ID=MS.gene32272.t1.exon2;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48861038 | 48861226 | 48861038 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48861907 | 48862116 | 48861907 | ID=MS.gene32272.t1.exon3;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48861907 | 48862116 | 48861907 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48862261 | 48862350 | 48862261 | ID=MS.gene32272.t1.exon4;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48862261 | 48862350 | 48862261 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48862845 | 48862922 | 48862845 | ID=MS.gene32272.t1.exon5;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48862845 | 48862922 | 48862845 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48863026 | 48863190 | 48863026 | ID=MS.gene32272.t1.exon6;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48863026 | 48863190 | 48863026 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48864746 | 48865114 | 48864746 | ID=MS.gene32272.t1.exon7;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48864746 | 48865114 | 48864746 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48867200 | 48867486 | 48867200 | ID=MS.gene32272.t1.exon8;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48867200 | 48867486 | 48867200 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48870007 | 48870169 | 48870007 | ID=MS.gene32272.t1.exon9;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48870007 | 48870169 | 48870007 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48870829 | 48871178 | 48870829 | ID=MS.gene32272.t1.exon10;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48870829 | 48871178 | 48870829 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48872013 | 48872090 | 48872013 | ID=MS.gene32272.t1.exon11;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48872013 | 48872090 | 48872013 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| chr8.3 | exon | 48872377 | 48872404 | 48872377 | ID=MS.gene32272.t1.exon12;Parent=MS.gene32272.t1 |
| chr8.3 | CDS | 48872377 | 48872404 | 48872377 | ID=cds.MS.gene32272.t1;Parent=MS.gene32272.t1 |
| Gene Sequence |
| Protein sequence |
