AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32465

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32465.t1 MTR_0091s0080 33.883 546 245 7 80 610 28 472 2.07e-106 330
MS.gene32465.t1 MTR_0091s0090 42.512 207 118 1 396 602 4 209 8.77e-55 187
MS.gene32465.t1 MTR_0091s0090 36.946 203 125 1 128 327 3 205 8.38e-40 147
MS.gene32465.t1 MTR_1g052720 34.470 264 146 6 80 320 36 295 1.93e-48 171
MS.gene32465.t1 MTR_1g052720 34.432 273 161 4 345 603 34 302 3.24e-47 168
MS.gene32465.t1 MTR_6g465600 36.694 248 142 4 337 570 28 274 4.85e-44 160
MS.gene32465.t1 MTR_6g465600 35.565 239 139 4 80 304 39 276 4.85e-44 160
MS.gene32465.t1 MTR_0246s0040 34.091 264 156 7 354 616 72 318 2.33e-34 133
MS.gene32465.t1 MTR_0246s0040 33.028 218 133 3 87 304 72 276 1.54e-32 128
MS.gene32465.t1 MTR_1g105780 29.437 231 150 2 86 304 40 269 2.42e-29 117
MS.gene32465.t1 MTR_1g105780 29.302 215 140 2 351 554 38 251 6.11e-26 108
MS.gene32465.t1 MTR_7g110090 28.632 234 154 2 86 307 39 271 5.88e-29 116
MS.gene32465.t1 MTR_7g110090 27.490 251 165 5 337 573 22 269 6.42e-24 102
MS.gene32465.t1 MTR_1g105765 29.004 231 151 2 86 304 40 269 6.95e-29 116
MS.gene32465.t1 MTR_1g105765 29.767 215 139 2 351 554 38 251 3.68e-26 108
MS.gene32465.t1 MTR_3g070250 29.707 239 150 2 86 307 44 281 1.31e-26 110
MS.gene32465.t1 MTR_3g070250 28.512 242 151 6 336 558 26 264 7.09e-20 90.5
MS.gene32465.t1 MTR_4g032560 29.060 234 153 2 86 307 68 300 1.02e-25 108
MS.gene32465.t1 MTR_4g032560 27.881 269 180 5 314 569 28 295 1.39e-21 96.3
MS.gene32465.t1 MTR_1g084880 29.289 239 151 2 86 307 39 276 1.03e-25 107
MS.gene32465.t1 MTR_1g084880 28.384 229 143 4 351 561 37 262 1.36e-18 86.7
MS.gene32465.t1 MTR_3g048970 28.870 239 152 2 86 307 39 276 3.83e-25 105
MS.gene32465.t1 MTR_3g048970 27.948 229 144 4 351 561 37 262 1.68e-18 86.7
MS.gene32465.t1 MTR_4g032580 28.632 234 154 2 86 307 68 300 4.42e-25 106
MS.gene32465.t1 MTR_4g032580 27.881 269 180 5 314 569 28 295 1.23e-21 96.3
MS.gene32465.t1 MTR_3g085990 29.730 222 130 4 86 307 40 235 8.25e-25 103
MS.gene32465.t1 MTR_3g085990 26.316 228 140 6 335 561 21 221 2.95e-15 76.3
MS.gene32465.t1 MTR_1g023840 40.594 101 60 0 471 571 10 110 8.01e-22 92.4
MS.gene32465.t1 MTR_1g023840 44.681 94 52 0 206 299 13 106 1.30e-21 91.7
MS.gene32465.t1 MTR_7g050355 26.022 269 133 3 337 604 28 231 3.35e-21 98.2
MS.gene32465.t1 MTR_1g047540 26.840 231 147 5 86 307 39 256 6.54e-19 90.5
MS.gene32465.t1 MTR_1g047540 27.530 247 155 8 337 573 22 254 1.11e-16 83.6
MS.gene32465.t1 MTR_4g062370 27.165 254 163 6 310 551 8 251 6.95e-19 91.3
MS.gene32465.t1 MTR_4g062370 27.854 219 141 4 86 290 43 258 2.62e-18 89.4
MS.gene32465.t1 MTR_2g100360 25.792 221 142 3 85 286 38 255 4.21e-18 85.1
MS.gene32465.t1 MTR_2g100360 25.221 226 152 3 351 560 37 261 4.81e-16 79.3
MS.gene32465.t1 MTR_5g066660 26.210 248 162 6 87 332 40 268 5.66e-18 85.1
MS.gene32465.t1 MTR_5g066660 26.484 219 140 5 351 567 37 236 1.46e-12 68.9
MS.gene32465.t1 MTR_2g038740 28.272 191 120 1 86 259 39 229 1.64e-17 87.0
MS.gene32465.t1 MTR_2g038740 27.413 259 160 5 351 582 37 294 2.68e-17 86.3
MS.gene32465.t1 MTR_8g064960 41.892 74 42 1 226 299 27 99 2.48e-17 78.6
MS.gene32465.t1 MTR_8g064930 67.347 49 16 0 359 407 2 50 4.08e-17 75.9
MS.gene32465.t1 MTR_3g452180 26.374 182 121 2 138 307 7 187 8.14e-17 79.3
MS.gene32465.t1 MTR_3g452180 25.824 182 119 4 405 573 7 185 8.57e-14 70.9
MS.gene32465.t1 MTR_4g117740 28.571 154 93 2 97 250 61 197 1.48e-16 79.0
MS.gene32465.t1 MTR_4g117740 27.815 151 91 2 368 518 65 197 1.50e-13 70.1
MS.gene32465.t1 MTR_1g087870 25.000 240 153 6 101 319 2 235 5.98e-16 78.6
MS.gene32465.t1 MTR_1g087870 25.114 219 147 4 368 570 2 219 8.39e-16 78.2
MS.gene32465.t1 MTR_6g033605 37.349 83 51 1 226 307 30 112 1.91e-14 70.5
MS.gene32465.t1 MTR_6g033605 32.927 82 54 1 494 574 30 111 1.50e-12 65.1
MS.gene32465.t1 MTR_0521s0010 26.519 181 102 2 87 250 34 200 2.02e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 164 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTGTGGCAAGGATTTC+TGG 0.139608 8.2:+14907987 None:intergenic
AAACTGGACCGTCGTGATTT+TGG 0.142859 8.2:-14909687 MS.gene32465:CDS
ACAATATTAGGAGGCATAAA+AGG 0.192691 8.2:+14910262 None:intergenic
CAATCCAGCCTTGTTTCTTA+TGG 0.243933 8.2:+14908270 None:intergenic
CGGTCCAGTTTGGATATTAT+TGG 0.264347 8.2:+14909699 None:intergenic
ATCCATGGGTGCAGTGTATT+GGG 0.290852 8.2:+14907762 None:intergenic
CATTAGACATTGCCGTGGTT+TGG 0.309583 8.2:-14909491 MS.gene32465:intron
AAGGAGCAGATCACAATATT+AGG 0.318102 8.2:+14910250 None:intergenic
CTCATCATTGCCATCTCACT+TGG 0.320277 8.2:+14910133 None:intergenic
TGTCACGCTGAATGAACTTT+AGG 0.324413 8.2:+14909390 None:intergenic
ACAAATGCAGATTTGATTAG+AGG 0.328195 8.2:-14909224 MS.gene32465:CDS
ATTAGACATTGCCGTGGTTT+GGG 0.336423 8.2:-14909490 MS.gene32465:intron
CCGAGGTTCATTACTTCATC+AGG 0.337428 8.2:-14908208 MS.gene32465:CDS
GATATATCGGATAATGGATA+TGG 0.364913 8.2:+14908241 None:intergenic
CCTACCACACTTACGATTGT+TGG 0.366401 8.2:-14907965 MS.gene32465:CDS
ACCTCTGCGATGTGCAAATC+AGG 0.368835 8.2:+14907858 None:intergenic
ATCGTCAAGGTCATAAGATT+TGG 0.374229 8.2:+14909768 None:intergenic
ACATCGCAGAGGTTGGTTGC+AGG 0.375369 8.2:-14907848 MS.gene32465:CDS
ACAACAATGATATTGTTGTT+TGG 0.386359 8.2:+14908421 None:intergenic
ACCTCAATCTCATTGTTCAT+TGG 0.386489 8.2:+14909900 None:intergenic
GATATTTATAACATTGTAGA+TGG 0.391221 8.2:-14908340 MS.gene32465:CDS
GACTTCGTCTGATGTCCTCT+CGG 0.399084 8.2:-14908140 MS.gene32465:CDS
TATCCATGGGTGCAGTGTAT+TGG 0.399336 8.2:+14907761 None:intergenic
ACTTCAGACAAGGCTGGTCT+AGG 0.399428 8.2:-14908369 MS.gene32465:CDS
GCAAGGGATATATCGGATAA+TGG 0.403725 8.2:+14908235 None:intergenic
AAAATCACGACGGTCCAGTT+TGG 0.405460 8.2:+14909689 None:intergenic
ATGCTATGATTGGTGGTGAT+TGG 0.409098 8.2:-14907883 MS.gene32465:CDS
TACTCCAATAATATCCAAAC+TGG 0.412151 8.2:-14909703 MS.gene32465:CDS
GGATGTTAACTCAGGATGTT+TGG 0.412783 8.2:-14909613 MS.gene32465:intron
TGCATGCTGCAAATCAGCTT+TGG 0.415627 8.2:+14910202 None:intergenic
CATAAGAAACAAGGCTGGAT+TGG 0.419848 8.2:-14908269 MS.gene32465:CDS
AACCAGACTTTGCCGTGGTA+TGG 0.440028 8.2:-14908016 MS.gene32465:intron
CACTATTGAATTGACTTACT+CGG 0.440432 8.2:-14909634 MS.gene32465:CDS
TTGATTACGTTGGATTTGCC+TGG 0.442541 8.2:-14909421 MS.gene32465:CDS
GTGTACAATTGAAGGTGATT+GGG 0.443885 8.2:-14909357 MS.gene32465:CDS
AAACCTATGGTCAGCGGCAG+TGG 0.455398 8.2:-14907731 MS.gene32465:CDS
GAACTTTAGGTCACATCTCC+AGG 0.457339 8.2:+14909403 None:intergenic
ACTCCTATGTGTACAATTGA+AGG 0.457401 8.2:-14909365 MS.gene32465:CDS
CGGCAACGCAAGGGATATAT+CGG 0.461190 8.2:+14908228 None:intergenic
CAGACATAGTGTCAAATTCA+AGG 0.463743 8.2:+14910101 None:intergenic
GACAAAGATAACACAGTCCT+TGG 0.465488 8.2:-14907797 MS.gene32465:CDS
TGTGTACAATTGAAGGTGAT+TGG 0.473160 8.2:-14909358 MS.gene32465:CDS
AGGCTTCTTGTTACTCTGAT+GGG 0.475086 8.2:+14910294 None:intergenic
TCATCATTGCCATCTCACTT+GGG 0.476104 8.2:+14910134 None:intergenic
TTCGATAGACCTTGCGGTCA+CGG 0.478744 8.2:-14909297 MS.gene32465:CDS
CTGTGCGAAGGGACCTGTCT+CGG 0.479542 8.2:-14909026 MS.gene32465:CDS
AAGGCTTCTTGTTACTCTGA+TGG 0.487578 8.2:+14910293 None:intergenic
TAGGTTTCACATAGTATCCA+TGG 0.490660 8.2:+14907747 None:intergenic
ATGGTCATGAGTAGTAGATT+AGG 0.500878 8.2:+14908289 None:intergenic
TGGGTCTATCTGAAATATGC+GGG 0.502250 8.2:-14908313 MS.gene32465:CDS
TTGGTCCGAACGGCTGTACA+TGG 0.502745 8.2:-14907946 MS.gene32465:CDS
CATCTCACCATGTCTGACTT+AGG 0.502842 8.2:-14911011 None:intergenic
ACAGTGAGGTCCGTATTTAT+CGG 0.505137 8.2:+14909446 None:intergenic
GAAGGGACCTGTCTCGGTTG+AGG 0.505460 8.2:-14909020 MS.gene32465:CDS
GCTTCTATATTCTGTTTCCA+AGG 0.505945 8.2:-14909170 MS.gene32465:intron
TCTGCATTTGTAGACGGCAC+AGG 0.506847 8.2:+14909236 None:intergenic
GACTTCTACAACATTGAGCT+TGG 0.507615 8.2:-14909819 MS.gene32465:CDS
CCTTGCTTGAGTGTGGTCGT+TGG 0.508319 8.2:-14910231 MS.gene32465:CDS
TCACCACCAATCATAGCATA+AGG 0.511917 8.2:+14907887 None:intergenic
ACTTCGTCTGATGTCCTCTC+GGG 0.511997 8.2:-14908139 MS.gene32465:CDS
CATCTCCATGTACAGCCGTT+CGG 0.512529 8.2:+14907941 None:intergenic
GAGTATGCTGGAACAGATGT+CGG 0.514049 8.2:-14907660 MS.gene32465:CDS
AATATGCCTTATGCTATGAT+TGG 0.515256 8.2:-14907893 MS.gene32465:CDS
TCCAATGAACAATGAGATTG+AGG 0.518221 8.2:-14909901 MS.gene32465:CDS
AGCTTTATATGAGGAAAGGT+TGG 0.518511 8.2:-14909854 MS.gene32465:CDS
GATAAGTCCTCAACCGAGAC+AGG 0.525131 8.2:+14909013 None:intergenic
CAATATTAGGAGGCATAAAA+GGG 0.527022 8.2:+14910263 None:intergenic
CGACCACTGCCGCTGACCAT+AGG 0.527761 8.2:+14907728 None:intergenic
ACCCCAATACACTGCACCCA+TGG 0.533195 8.2:-14907764 MS.gene32465:CDS
TGCACAAGGAATGCTGTCAT+TGG 0.536531 8.2:-14910955 MS.gene32465:CDS
CAGTGGTCGATATGTGTACC+AGG 0.539166 8.2:-14907714 MS.gene32465:CDS
ATTATTGGAGTAGTGTGAGC+AGG 0.541688 8.2:+14909714 None:intergenic
TAATGAACCTCGGCAACGCA+AGG 0.541750 8.2:+14908218 None:intergenic
TGATGTCCTCTCGGGCACTT+TGG 0.543138 8.2:-14908131 MS.gene32465:intron
TTGCAAGGCGAAGAGTATGC+TGG 0.545573 8.2:-14907672 MS.gene32465:CDS
ATAACATTGTAGATGGTGCA+TGG 0.547247 8.2:-14908333 MS.gene32465:CDS
CGAGGTTCATTACTTCATCA+GGG 0.547766 8.2:-14908207 MS.gene32465:CDS
TCACCATGTCTGACTTAGGT+GGG 0.551890 8.2:-14911007 None:intergenic
CATATTATTTGCAACAGCGA+AGG 0.553325 8.2:+14907910 None:intergenic
CTTCAGACAAGGCTGGTCTA+GGG 0.553757 8.2:-14908368 MS.gene32465:CDS
CAAGGAATGCTGTCATTGGC+AGG 0.555729 8.2:-14910951 MS.gene32465:intron
CGTGTTACCTCCGATAAATA+CGG 0.556373 8.2:-14909456 MS.gene32465:CDS
AACGACCTTCGACAAACCTA+CGG 0.556786 8.2:+14909318 None:intergenic
AGTATGCTGGAACAGATGTC+GGG 0.557360 8.2:-14907659 MS.gene32465:CDS
CTTACGATTGTTGGTCCGAA+CGG 0.558198 8.2:-14907956 MS.gene32465:CDS
CTCACTGTCATTGATTACGT+TGG 0.558362 8.2:-14909431 MS.gene32465:CDS
TATATGAGGAAAGGTTGGTA+TGG 0.559929 8.2:-14909849 MS.gene32465:CDS
GATTTGCACATCGCAGAGGT+TGG 0.560790 8.2:-14907855 MS.gene32465:CDS
GGACTGTGTTATCTTTGTCA+TGG 0.561082 8.2:+14907801 None:intergenic
TCTTCTCCTCCGTGACCGCA+AGG 0.561112 8.2:+14909288 None:intergenic
TGGATACTATGTGAAACCTA+TGG 0.563204 8.2:-14907744 MS.gene32465:CDS
TCAGACTGCAATATGAACCT+TGG 0.563823 8.2:+14909194 None:intergenic
TGCAGTGTATTGGGGTATGT+CGG 0.565836 8.2:+14907771 None:intergenic
CTGCATTTGTAGACGGCACA+GGG 0.566431 8.2:+14909237 None:intergenic
TGATTAGAGGCATTGATCCA+AGG 0.567311 8.2:-14909211 MS.gene32465:CDS
ATATATCCCTTGCGTTGCCG+AGG 0.568869 8.2:-14908225 MS.gene32465:CDS
TGTGGTAGGTTTCTGTGGCA+AGG 0.569531 8.2:+14907979 None:intergenic
GACAAGCTTTATATGAGGAA+AGG 0.570103 8.2:-14909858 MS.gene32465:CDS
ATCTCACTTGGGGTATACGT+TGG 0.570410 8.2:+14910145 None:intergenic
TAACATTGTAGATGGTGCAT+GGG 0.570614 8.2:-14908332 MS.gene32465:CDS
CTCACCATGTCTGACTTAGG+TGG 0.572352 8.2:-14911008 None:intergenic
ACTTACTCGGATGTTAACTC+AGG 0.572912 8.2:-14909621 MS.gene32465:CDS
GAAAGGTTGGTATGGACTGA+AGG 0.575278 8.2:-14909841 MS.gene32465:CDS
GAGGCGACAAGCTTTATATG+AGG 0.576586 8.2:-14909863 MS.gene32465:CDS
ACAAGGCTGGTCTAGGGTGA+AGG 0.576887 8.2:-14908362 MS.gene32465:CDS
CATCATTGCCATCTCACTTG+GGG 0.579124 8.2:+14910135 None:intergenic
AACGTATACCCCAAGTGAGA+TGG 0.579805 8.2:-14910143 MS.gene32465:CDS
AAATCTGTTGTTGATCGTCA+AGG 0.579813 8.2:+14909755 None:intergenic
ACAACATTGAGCTTGGTGCA+TGG 0.580204 8.2:-14909812 MS.gene32465:CDS
CCAACAATCGTAAGTGTGGT+AGG 0.580385 8.2:+14907965 None:intergenic
CGAGACAGGTCCCTTCGCAC+AGG 0.583465 8.2:+14909027 None:intergenic
ACGACCTTCGACAAACCTAC+GGG 0.584033 8.2:+14909319 None:intergenic
AGGTCTACTTCAGACAAGGC+TGG 0.585540 8.2:-14908375 MS.gene32465:CDS
ATCTGCTCCTTGCTTGAGTG+TGG 0.585624 8.2:-14910238 MS.gene32465:CDS
ATCAAATCTGCATTTGTAGA+CGG 0.590289 8.2:+14909230 None:intergenic
GCATGAAAATGTTGTAGGTG+GGG 0.592686 8.2:-14910182 MS.gene32465:CDS
TCACTATCTCAAATATTGCA+AGG 0.596203 8.2:-14907687 MS.gene32465:CDS
TGCATGAAAATGTTGTAGGT+GGG 0.596497 8.2:-14910183 MS.gene32465:CDS
ATGACCATAAGAAACAAGGC+TGG 0.597597 8.2:-14908274 MS.gene32465:CDS
CGACCTCGATCCTGTGCGAA+GGG 0.601460 8.2:-14909037 MS.gene32465:CDS
ATGCCTTATGCTATGATTGG+TGG 0.601798 8.2:-14907890 MS.gene32465:CDS
TTGGGGTATGTCGGAAACCA+AGG 0.606539 8.2:+14907780 None:intergenic
AATGAACCTCGGCAACGCAA+GGG 0.607154 8.2:+14908219 None:intergenic
AACGCTTTGGATGCTGCACA+AGG 0.608033 8.2:-14910969 MS.gene32465:CDS
AGCATGCATGAAAATGTTGT+AGG 0.609002 8.2:-14910187 MS.gene32465:CDS
TGTACAATTGAAGGTGATTG+GGG 0.612279 8.2:-14909356 MS.gene32465:CDS
GTAAGTGTGGTAGGTTTCTG+TGG 0.617237 8.2:+14907974 None:intergenic
CCAACGACCACACTCAAGCA+AGG 0.618711 8.2:+14910231 None:intergenic
GAGCAGATCACAATATTAGG+AGG 0.621127 8.2:+14910253 None:intergenic
AGGTTTCACATAGTATCCAT+GGG 0.622147 8.2:+14907748 None:intergenic
CAACAGCGAACTTAACTGCA+TGG 0.624703 8.2:+14907825 None:intergenic
CATGAAAATGTTGTAGGTGG+GGG 0.624750 8.2:-14910181 MS.gene32465:CDS
TCCATGGGTGCAGTGTATTG+GGG 0.627336 8.2:+14907763 None:intergenic
ATGCATGAAAATGTTGTAGG+TGG 0.627822 8.2:-14910184 MS.gene32465:CDS
ACCTGATTTGCACATCGCAG+AGG 0.634639 8.2:-14907859 MS.gene32465:CDS
GGACAATATGTAAGGCCCGT+AGG 0.636455 8.2:-14909334 MS.gene32465:CDS
TCACCTTCAATTGTACACAT+AGG 0.636668 8.2:+14909362 None:intergenic
ATGGGTCTATCTGAAATATG+CGG 0.636801 8.2:-14908314 MS.gene32465:CDS
ACGACCTCGATCCTGTGCGA+AGG 0.639634 8.2:-14909038 MS.gene32465:CDS
ATCTGCATTAGACATTGCCG+TGG 0.643012 8.2:-14909496 MS.gene32465:intron
GGTCCCTTCGCACAGGATCG+AGG 0.647508 8.2:+14909034 None:intergenic
TTCTGGCAGAAGCCATACCA+CGG 0.648051 8.2:+14908004 None:intergenic
GGCAAGGTCTACTTCAGACA+AGG 0.649008 8.2:-14908379 MS.gene32465:CDS
CCTGATGAAGTAATGAACCT+CGG 0.649312 8.2:+14908208 None:intergenic
CGCTTACAGAACCCAAACCA+CGG 0.655051 8.2:+14909479 None:intergenic
TTATTTAGCAGTTAAAGGCG+AGG 0.655685 8.2:-14908507 MS.gene32465:intron
GAGGTTCATTACTTCATCAG+GGG 0.659487 8.2:-14908206 MS.gene32465:CDS
CAAGTGAGATGGCAATGATG+AGG 0.660753 8.2:-14910132 MS.gene32465:CDS
ACTCATGACCATAAGAAACA+AGG 0.663177 8.2:-14908278 MS.gene32465:CDS
TCAAAATCTTGACAGATGTG+CGG 0.663839 8.2:+14908161 None:intergenic
CGGACCAACAATCGTAAGTG+TGG 0.667344 8.2:+14907961 None:intergenic
ATTTGAGATAGTGATTGACC+TGG 0.673697 8.2:+14907696 None:intergenic
GGGTCTATCTGAAATATGCG+GGG 0.673953 8.2:-14908312 MS.gene32465:CDS
TATATACCAAAGTGCCCGAG+AGG 0.678235 8.2:+14908125 None:intergenic
AAGGCCCGTAGGTTTGTCGA+AGG 0.678246 8.2:-14909323 MS.gene32465:CDS
TGTTTAACCAGACTTTGCCG+TGG 0.679547 8.2:-14908021 MS.gene32465:intron
AAACCCACCTAAGTCAGACA+TGG 0.685362 8.2:+14911004 None:intergenic
GTGAGGTCCGTATTTATCGG+AGG 0.693002 8.2:+14909449 None:intergenic
AGGTCGTTCGATAGACCTTG+CGG 0.706168 8.2:-14909303 MS.gene32465:CDS
TATGTGAAACCTATGGTCAG+CGG 0.713139 8.2:-14907737 MS.gene32465:CDS
GAGGTTCGACTGTATCGCAG+AGG 0.730544 8.2:-14909882 MS.gene32465:CDS
CAACGTAATCAATGACAGTG+AGG 0.734984 8.2:+14909432 None:intergenic
GATAGACCTTGCGGTCACGG+AGG 0.760484 8.2:-14909294 MS.gene32465:CDS
GTACAATTGAAGGTGATTGG+GGG 0.819509 8.2:-14909355 MS.gene32465:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGCATAATATAAAATATAAA+TGG - chr8.2:14908261-14908280 MS.gene32465:CDS 10.0%
!! AAAAAACCATATAAATTCAT+TGG + chr8.2:14909583-14909602 None:intergenic 15.0%
!! AAAAGATTGAAAAAAACATT+TGG + chr8.2:14908330-14908349 None:intergenic 15.0%
!! GGTTAATATAATTAGATATT+TGG - chr8.2:14910568-14910587 MS.gene32465:intron 15.0%
!! TACATTCTAATTTGAATATA+TGG - chr8.2:14909823-14909842 MS.gene32465:CDS 15.0%
!!! TATGTTAACATTTTCTATTA+TGG - chr8.2:14910098-14910117 MS.gene32465:intron 15.0%
!!! TTATTTTGATTTTTAATGCA+TGG - chr8.2:14907938-14907957 MS.gene32465:CDS 15.0%
!! AGAAATAAACAATAACACAA+CGG + chr8.2:14909096-14909115 None:intergenic 20.0%
!! ATGTTAACATAAATTTATGC+CGG + chr8.2:14910089-14910108 None:intergenic 20.0%
!! GATATTTATAACATTGTAGA+TGG - chr8.2:14910317-14910336 MS.gene32465:intron 20.0%
!! GTATCTTAAGAATACAAAAT+TGG + chr8.2:14908042-14908061 None:intergenic 20.0%
!! TACATGTTTACTCTTTATTA+TGG - chr8.2:14908059-14908078 MS.gene32465:intron 20.0%
!! TTATGAGGAAAAAAAATCTA+TGG - chr8.2:14907787-14907806 MS.gene32465:CDS 20.0%
!!! AACTAACGTACAAATTTTTT+CGG + chr8.2:14909988-14910007 None:intergenic 20.0%
!!! TTTAGGACAAAAAATATCTA+GGG - chr8.2:14908085-14908104 MS.gene32465:intron 20.0%
! AAAATAATGATATGCAACAC+AGG + chr8.2:14907925-14907944 None:intergenic 25.0%
! AAATAATGATATGCAACACA+GGG + chr8.2:14907924-14907943 None:intergenic 25.0%
! AACATATTGTTAACATGCTA+AGG + chr8.2:14907879-14907898 None:intergenic 25.0%
! ATTTCGTTCATTCGATTATA+AGG - chr8.2:14910593-14910612 MS.gene32465:intron 25.0%
! GTTTCCTATCTAATATCATA+AGG - chr8.2:14910120-14910139 MS.gene32465:CDS 25.0%
! TTAGCATCAAACACATTTAT+TGG + chr8.2:14908641-14908660 None:intergenic 25.0%
! TTTCTGTTTGTGTTTAGTAA+CGG - chr8.2:14909125-14909144 MS.gene32465:intron 25.0%
!! AAATTTTCACGACAACAATA+AGG - chr8.2:14909796-14909815 MS.gene32465:CDS 25.0%
!! ACAACAATGATATTGTTGTT+TGG + chr8.2:14910239-14910258 None:intergenic 25.0%
!! GGTATATAATTTGCACTAAT+TGG - chr8.2:14910547-14910566 MS.gene32465:intron 25.0%
!! TATATGTTGTTTATTCTGTC+CGG - chr8.2:14909537-14909556 MS.gene32465:intron 25.0%
!!! AACTTGTTATAAACATGCAA+AGG + chr8.2:14908298-14908317 None:intergenic 25.0%
!!! CTAGATATTTTTTGTCCTAA+AGG + chr8.2:14908086-14908105 None:intergenic 25.0%
!!! CTTTAGGACAAAAAATATCT+AGG - chr8.2:14908084-14908103 MS.gene32465:intron 25.0%
AACAACATATACTTCAGTTC+AGG + chr8.2:14909528-14909547 None:intergenic 30.0%
AAGGTTATCTTACTGTTTGT+TGG - chr8.2:14910612-14910631 MS.gene32465:intron 30.0%
AATATGCCTTATGCTATGAT+TGG - chr8.2:14910764-14910783 MS.gene32465:intron 30.0%
ACAAATGCAGATTTGATTAG+AGG - chr8.2:14909433-14909452 MS.gene32465:CDS 30.0%
ACAACATATACTTCAGTTCA+GGG + chr8.2:14909527-14909546 None:intergenic 30.0%
ACGAATAACAATCAAATTGC+CGG + chr8.2:14909559-14909578 None:intergenic 30.0%
ACTCTTTATTATGGTCCTTT+AGG - chr8.2:14908068-14908087 MS.gene32465:intron 30.0%
AGTTATCATAAACTCTGTCT+AGG - chr8.2:14909945-14909964 MS.gene32465:CDS 30.0%
ATCAAACATAACGATATCAG+AGG + chr8.2:14908235-14908254 None:intergenic 30.0%
ATCAAATCTGCATTTGTAGA+CGG + chr8.2:14909430-14909449 None:intergenic 30.0%
CACACCTTATGATATTAGAT+AGG + chr8.2:14910127-14910146 None:intergenic 30.0%
CAGATATACTTTCTTATGTC+CGG - chr8.2:14910067-14910086 MS.gene32465:intron 30.0%
GTTGAAGTTCAGAAAAAGAA+TGG - chr8.2:14910257-14910276 MS.gene32465:CDS 30.0%
TACTCCAATAATATCCAAAC+TGG - chr8.2:14908954-14908973 MS.gene32465:intron 30.0%
TAGTCTTTCAAAAAGCAGTT+AGG + chr8.2:14908700-14908719 None:intergenic 30.0%
TATGTCCTCATCTATTAGAA+TGG + chr8.2:14908611-14908630 None:intergenic 30.0%
TCACTATCTCAAATATTGCA+AGG - chr8.2:14910970-14910989 MS.gene32465:CDS 30.0%
TCTATTACTCTCTACAAATC+CGG + chr8.2:14909881-14909900 None:intergenic 30.0%
TTCGTGCCAATGAATTTATA+TGG - chr8.2:14909574-14909593 MS.gene32465:intron 30.0%
! AACAAAACTTGGTGGTTAAA+AGG + chr8.2:14909751-14909770 None:intergenic 30.0%
! ACAATATTAGGAGGCATAAA+AGG + chr8.2:14908398-14908417 None:intergenic 30.0%
! ACTTCTTTTGCAAAACATGA+AGG + chr8.2:14910179-14910198 None:intergenic 30.0%
! CAATATTAGGAGGCATAAAA+GGG + chr8.2:14908397-14908416 None:intergenic 30.0%
! CACTATTGAATTGACTTACT+CGG - chr8.2:14909023-14909042 MS.gene32465:CDS 30.0%
! TCATGTTTTGCAAAAGAAGT+AGG - chr8.2:14910179-14910198 MS.gene32465:CDS 30.0%
! TGTCCTTATTTAGCAGTTAA+AGG - chr8.2:14910145-14910164 MS.gene32465:CDS 30.0%
! TGTTAATTTTCGTAGGGAAT+GGG - chr8.2:14908667-14908686 MS.gene32465:intron 30.0%
!! GATATATCGGATAATGGATA+TGG + chr8.2:14910419-14910438 None:intergenic 30.0%
!!! AACTGCTTTTTGAAAGACTA+TGG - chr8.2:14908700-14908719 MS.gene32465:intron 30.0%
!!! ATTTGTACGTTAGTTTTGTG+CGG - chr8.2:14909993-14910012 MS.gene32465:intron 30.0%
AAATCTGTTGTTGATCGTCA+AGG + chr8.2:14908905-14908924 None:intergenic 35.0%
AACGCAGCATAAACAAAACT+TGG + chr8.2:14909762-14909781 None:intergenic 35.0%
AAGGAGCAGATCACAATATT+AGG + chr8.2:14908410-14908429 None:intergenic 35.0%
ACCTCAATCTCATTGTTCAT+TGG + chr8.2:14908760-14908779 None:intergenic 35.0%
ACTCATGACCATAAGAAACA+AGG - chr8.2:14910379-14910398 MS.gene32465:intron 35.0%
ACTCCTATGTGTACAATTGA+AGG - chr8.2:14909292-14909311 MS.gene32465:CDS 35.0%
AGCATGCATGAAAATGTTGT+AGG - chr8.2:14908470-14908489 MS.gene32465:CDS 35.0%
AGGTTTCACATAGTATCCAT+GGG + chr8.2:14910912-14910931 None:intergenic 35.0%
AGTTCAGAAAAAGAATGGCA+AGG - chr8.2:14910262-14910281 MS.gene32465:CDS 35.0%
ATAACATTGTAGATGGTGCA+TGG - chr8.2:14910324-14910343 MS.gene32465:intron 35.0%
ATCGTCAAGGTCATAAGATT+TGG + chr8.2:14908892-14908911 None:intergenic 35.0%
ATGCATGAAAATGTTGTAGG+TGG - chr8.2:14908473-14908492 MS.gene32465:CDS 35.0%
ATGGTCATGAGTAGTAGATT+AGG + chr8.2:14910371-14910390 None:intergenic 35.0%
CAGACATAGTGTCAAATTCA+AGG + chr8.2:14908559-14908578 None:intergenic 35.0%
CATAAACAACCACAGTAAAG+AGG + chr8.2:14907772-14907791 None:intergenic 35.0%
CATATTATTTGCAACAGCGA+AGG + chr8.2:14910750-14910769 None:intergenic 35.0%
CATCAAACACATTTATTGGC+AGG + chr8.2:14908637-14908656 None:intergenic 35.0%
CTTTACTGTGGTTGTTTATG+AGG - chr8.2:14907772-14907791 MS.gene32465:CDS 35.0%
GCTTCTATATTCTGTTTCCA+AGG - chr8.2:14909487-14909506 MS.gene32465:CDS 35.0%
GGCATAAAAGGGAAAAAGTA+AGG + chr8.2:14908386-14908405 None:intergenic 35.0%
GTGTACAATTGAAGGTGATT+GGG - chr8.2:14909300-14909319 MS.gene32465:CDS 35.0%
TAACATTGTAGATGGTGCAT+GGG - chr8.2:14910325-14910344 MS.gene32465:intron 35.0%
TAGGTTTCACATAGTATCCA+TGG + chr8.2:14910913-14910932 None:intergenic 35.0%
TCAAAATCTTGACAGATGTG+CGG + chr8.2:14910499-14910518 None:intergenic 35.0%
TCACCTTCAATTGTACACAT+AGG + chr8.2:14909298-14909317 None:intergenic 35.0%
TCCAATGAACAATGAGATTG+AGG - chr8.2:14908756-14908775 MS.gene32465:intron 35.0%
TCCTCATCTATTAGAATGGT+CGG + chr8.2:14908607-14908626 None:intergenic 35.0%
TCGCCTTTAACTGCTAAATA+AGG + chr8.2:14910151-14910170 None:intergenic 35.0%
TGCATGAAAATGTTGTAGGT+GGG - chr8.2:14908474-14908493 MS.gene32465:CDS 35.0%
TGGATACTATGTGAAACCTA+TGG - chr8.2:14910913-14910932 MS.gene32465:intron 35.0%
TGTACAATTGAAGGTGATTG+GGG - chr8.2:14909301-14909320 MS.gene32465:CDS 35.0%
TGTGTACAATTGAAGGTGAT+TGG - chr8.2:14909299-14909318 MS.gene32465:CDS 35.0%
TTATTTAGCAGTTAAAGGCG+AGG - chr8.2:14910150-14910169 MS.gene32465:CDS 35.0%
! AGCTTTATATGAGGAAAGGT+TGG - chr8.2:14908803-14908822 MS.gene32465:intron 35.0%
! ATATGGTTGAAGAGTGTAAG+TGG - chr8.2:14909840-14909859 MS.gene32465:CDS 35.0%
! ATGGGTCTATCTGAAATATG+CGG - chr8.2:14910343-14910362 MS.gene32465:intron 35.0%
! ATTTGAGATAGTGATTGACC+TGG + chr8.2:14910964-14910983 None:intergenic 35.0%
! CATGTCTGAAATAGAAACCA+TGG - chr8.2:14910029-14910048 MS.gene32465:intron 35.0%
! GACAAGCTTTATATGAGGAA+AGG - chr8.2:14908799-14908818 MS.gene32465:intron 35.0%
! GATCAACAACAGATTTTTCG+AGG - chr8.2:14908909-14908928 MS.gene32465:intron 35.0%
! GTGTTAATTTTCGTAGGGAA+TGG - chr8.2:14908666-14908685 MS.gene32465:intron 35.0%
!! TATATGAGGAAAGGTTGGTA+TGG - chr8.2:14908808-14908827 MS.gene32465:intron 35.0%
!! TGCTTTTTGAAAGACTATGG+TGG - chr8.2:14908703-14908722 MS.gene32465:intron 35.0%
!!! TGTTTTAACTGGAAACGCTT+TGG - chr8.2:14907675-14907694 MS.gene32465:CDS 35.0%
!!! TTAGGTGGGTTTGTTTTAAC+TGG - chr8.2:14907664-14907683 MS.gene32465:CDS 35.0%
AAGGCTTCTTGTTACTCTGA+TGG + chr8.2:14908367-14908386 None:intergenic 40.0%
ACAGTGAGGTCCGTATTTAT+CGG + chr8.2:14909214-14909233 None:intergenic 40.0%
ACATAACGATATCAGAGGCA+TGG + chr8.2:14908230-14908249 None:intergenic 40.0%
ACTTACTCGGATGTTAACTC+AGG - chr8.2:14909036-14909055 MS.gene32465:CDS 40.0%
AGGATGTTTGGTATTCACTG+TGG - chr8.2:14909056-14909075 MS.gene32465:intron 40.0%
AGGCTTCTTGTTACTCTGAT+GGG + chr8.2:14908366-14908385 None:intergenic 40.0%
ATGACCATAAGAAACAAGGC+TGG - chr8.2:14910383-14910402 MS.gene32465:intron 40.0%
ATGCCTTATGCTATGATTGG+TGG - chr8.2:14910767-14910786 MS.gene32465:intron 40.0%
ATTAGACATTGCCGTGGTTT+GGG - chr8.2:14909167-14909186 MS.gene32465:intron 40.0%
ATTATTGGAGTAGTGTGAGC+AGG + chr8.2:14908946-14908965 None:intergenic 40.0%
CAACGTAATCAATGACAGTG+AGG + chr8.2:14909228-14909247 None:intergenic 40.0%
CATAAGAAACAAGGCTGGAT+TGG - chr8.2:14910388-14910407 MS.gene32465:intron 40.0%
CATGAAAATGTTGTAGGTGG+GGG - chr8.2:14908476-14908495 MS.gene32465:CDS 40.0%
CCTGATGAAGTAATGAACCT+CGG + chr8.2:14910452-14910471 None:intergenic 40.0%
CCTTAGCAAGTTACCAGTAT+AGG - chr8.2:14908182-14908201 MS.gene32465:CDS 40.0%
CGAGGTTCATTACTTCATCA+GGG - chr8.2:14910450-14910469 MS.gene32465:intron 40.0%
CGGTCCAGTTTGGATATTAT+TGG + chr8.2:14908961-14908980 None:intergenic 40.0%
CGTGTTACCTCCGATAAATA+CGG - chr8.2:14909201-14909220 MS.gene32465:CDS 40.0%
GACAAAGATAACACAGTCCT+TGG - chr8.2:14910860-14910879 MS.gene32465:intron 40.0%
GACATGCAAAGCTATGTTCT+AGG + chr8.2:14907973-14907992 None:intergenic 40.0%
GACTTCTACAACATTGAGCT+TGG - chr8.2:14908838-14908857 MS.gene32465:intron 40.0%
GAGCAGATCACAATATTAGG+AGG + chr8.2:14908407-14908426 None:intergenic 40.0%
GAGGTTCATTACTTCATCAG+GGG - chr8.2:14910451-14910470 MS.gene32465:intron 40.0%
GCAAGGGATATATCGGATAA+TGG + chr8.2:14910425-14910444 None:intergenic 40.0%
GCAGCATAAACAAAACTTGG+TGG + chr8.2:14909759-14909778 None:intergenic 40.0%
GCATGAAAATGTTGTAGGTG+GGG - chr8.2:14908475-14908494 MS.gene32465:CDS 40.0%
GGACTGTGTTATCTTTGTCA+TGG + chr8.2:14910859-14910878 None:intergenic 40.0%
GGATGTTAACTCAGGATGTT+TGG - chr8.2:14909044-14909063 MS.gene32465:CDS 40.0%
GGGTACAAAATGCATAACCT+TGG + chr8.2:14909507-14909526 None:intergenic 40.0%
GTACAATTGAAGGTGATTGG+GGG - chr8.2:14909302-14909321 MS.gene32465:CDS 40.0%
GTGGATAAAATGATGCAGAC+CGG - chr8.2:14909859-14909878 MS.gene32465:CDS 40.0%
TATGTGAAACCTATGGTCAG+CGG - chr8.2:14910920-14910939 MS.gene32465:intron 40.0%
TCACCACCAATCATAGCATA+AGG + chr8.2:14910773-14910792 None:intergenic 40.0%
TCAGACTGCAATATGAACCT+TGG + chr8.2:14909466-14909485 None:intergenic 40.0%
TCATCATTGCCATCTCACTT+GGG + chr8.2:14908526-14908545 None:intergenic 40.0%
TCCGACCATTCTAATAGATG+AGG - chr8.2:14908603-14908622 MS.gene32465:intron 40.0%
TGACAGATAAAGTTCAGCCA+TGG + chr8.2:14910049-14910068 None:intergenic 40.0%
TGATTGGGGGACAATATGTA+AGG - chr8.2:14909315-14909334 MS.gene32465:CDS 40.0%
TGCATGTTACCTCTTTACTG+TGG - chr8.2:14907760-14907779 MS.gene32465:CDS 40.0%
TGCGGAAAAAATGCACTAAC+TGG + chr8.2:14910481-14910500 None:intergenic 40.0%
TGTCACGCTGAATGAACTTT+AGG + chr8.2:14909270-14909289 None:intergenic 40.0%
TTGATTACGTTGGATTTGCC+TGG - chr8.2:14909236-14909255 MS.gene32465:CDS 40.0%
! AATTTTCGTAGGGAATGGGT+CGG - chr8.2:14908671-14908690 MS.gene32465:intron 40.0%
! ATGCGCGTGTTAATTTTCGT+AGG - chr8.2:14908660-14908679 MS.gene32465:intron 40.0%
! CTCACTGTCATTGATTACGT+TGG - chr8.2:14909226-14909245 MS.gene32465:CDS 40.0%
! TGCGCGTGTTAATTTTCGTA+GGG - chr8.2:14908661-14908680 MS.gene32465:intron 40.0%
! TGGGTCTATCTGAAATATGC+GGG - chr8.2:14910344-14910363 MS.gene32465:intron 40.0%
!! ATGCTATGATTGGTGGTGAT+TGG - chr8.2:14910774-14910793 MS.gene32465:intron 40.0%
!! CAATCCAGCCTTGTTTCTTA+TGG + chr8.2:14910390-14910409 None:intergenic 40.0%
!! CCTATACTGGTAACTTGCTA+AGG + chr8.2:14908185-14908204 None:intergenic 40.0%
!! TGATTAGAGGCATTGATCCA+AGG - chr8.2:14909446-14909465 MS.gene32465:CDS 40.0%
AAAATCACGACGGTCCAGTT+TGG + chr8.2:14908971-14908990 None:intergenic 45.0%
AACGACCTTCGACAAACCTA+CGG + chr8.2:14909342-14909361 None:intergenic 45.0%
AACGTATACCCCAAGTGAGA+TGG - chr8.2:14908514-14908533 MS.gene32465:intron 45.0%
AATTCCCCCCAAAATCACGA+CGG + chr8.2:14908981-14909000 None:intergenic 45.0%
AGTATGCTGGAACAGATGTC+GGG - chr8.2:14910998-14911017 MS.gene32465:CDS 45.0%
ATCCATGGGTGCAGTGTATT+GGG + chr8.2:14910898-14910917 None:intergenic 45.0%
ATCTCACTTGGGGTATACGT+TGG + chr8.2:14908515-14908534 None:intergenic 45.0%
ATCTGCATTAGACATTGCCG+TGG - chr8.2:14909161-14909180 MS.gene32465:intron 45.0%
CAACAGCGAACTTAACTGCA+TGG + chr8.2:14910835-14910854 None:intergenic 45.0%
CAAGTGAGATGGCAATGATG+AGG - chr8.2:14908525-14908544 MS.gene32465:intron 45.0%
CATCATTGCCATCTCACTTG+GGG + chr8.2:14908525-14908544 None:intergenic 45.0%
CATTAGACATTGCCGTGGTT+TGG - chr8.2:14909166-14909185 MS.gene32465:intron 45.0%
CCAACAATCGTAAGTGTGGT+AGG + chr8.2:14910695-14910714 None:intergenic 45.0%
CCGAGGTTCATTACTTCATC+AGG - chr8.2:14910449-14910468 MS.gene32465:intron 45.0%
CCTACCACACTTACGATTGT+TGG - chr8.2:14910692-14910711 MS.gene32465:intron 45.0%
CGCTGTCATAGAACCTATAC+TGG + chr8.2:14908198-14908217 None:intergenic 45.0%
CTCATCATTGCCATCTCACT+TGG + chr8.2:14908527-14908546 None:intergenic 45.0%
CTTACGATTGTTGGTCCGAA+CGG - chr8.2:14910701-14910720 MS.gene32465:intron 45.0%
GAACTTTAGGTCACATCTCC+AGG + chr8.2:14909257-14909276 None:intergenic 45.0%
GAGTATGCTGGAACAGATGT+CGG - chr8.2:14910997-14911016 MS.gene32465:CDS 45.0%
GTAAGTGTGGTAGGTTTCTG+TGG + chr8.2:14910686-14910705 None:intergenic 45.0%
GTTTCTGTGGCAAGGATTTC+TGG + chr8.2:14910673-14910692 None:intergenic 45.0%
TATCCATGGGTGCAGTGTAT+TGG + chr8.2:14910899-14910918 None:intergenic 45.0%
TGCACAAGGAATGCTGTCAT+TGG - chr8.2:14907702-14907721 MS.gene32465:CDS 45.0%
TGCAGTGTATTGGGGTATGT+CGG + chr8.2:14910889-14910908 None:intergenic 45.0%
TGCATGCTGCAAATCAGCTT+TGG + chr8.2:14908458-14908477 None:intergenic 45.0%
TGTTTAACCAGACTTTGCCG+TGG - chr8.2:14910636-14910655 MS.gene32465:intron 45.0%
! AAACTGGACCGTCGTGATTT+TGG - chr8.2:14908970-14908989 MS.gene32465:intron 45.0%
! AACTGGACCGTCGTGATTTT+GGG - chr8.2:14908971-14908990 MS.gene32465:intron 45.0%
! GAGGCGACAAGCTTTATATG+AGG - chr8.2:14908794-14908813 MS.gene32465:intron 45.0%
! GGGTCTATCTGAAATATGCG+GGG - chr8.2:14910345-14910364 MS.gene32465:intron 45.0%
! TATATACCAAAGTGCCCGAG+AGG + chr8.2:14910535-14910554 None:intergenic 45.0%
! TTCTTGTTACTCTGATGGGC+TGG + chr8.2:14908362-14908381 None:intergenic 45.0%
!! ACAACATTGAGCTTGGTGCA+TGG - chr8.2:14908845-14908864 MS.gene32465:intron 45.0%
!! GAAAGGTTGGTATGGACTGA+AGG - chr8.2:14908816-14908835 MS.gene32465:intron 45.0%
!! TCGTGATTTTGGGGGGAATT+TGG - chr8.2:14908981-14909000 MS.gene32465:intron 45.0%
!! TCTTGTTACTCTGATGGGCT+GGG + chr8.2:14908361-14908380 None:intergenic 45.0%
!!! TGTACGTTAGTTTTGTGCGG+TGG - chr8.2:14909996-14910015 MS.gene32465:intron 45.0%
AACCAGACTTTGCCGTGGTA+TGG - chr8.2:14910641-14910660 MS.gene32465:intron 50.0%
AATGAACCTCGGCAACGCAA+GGG + chr8.2:14910441-14910460 None:intergenic 50.0%
ACCTCTGCGATGTGCAAATC+AGG + chr8.2:14910802-14910821 None:intergenic 50.0%
ACGACCTTCGACAAACCTAC+GGG + chr8.2:14909341-14909360 None:intergenic 50.0%
ACTTCGTCTGATGTCCTCTC+GGG - chr8.2:14910518-14910537 MS.gene32465:intron 50.0%
AGGTCGTTCGATAGACCTTG+CGG - chr8.2:14909354-14909373 MS.gene32465:CDS 50.0%
AGGTCTACTTCAGACAAGGC+TGG - chr8.2:14910282-14910301 MS.gene32465:CDS 50.0%
ATATATCCCTTGCGTTGCCG+AGG - chr8.2:14910432-14910451 MS.gene32465:intron 50.0%
ATCTGCTCCTTGCTTGAGTG+TGG - chr8.2:14908419-14908438 MS.gene32465:CDS 50.0%
CAAGGAATGCTGTCATTGGC+AGG - chr8.2:14907706-14907725 MS.gene32465:CDS 50.0%
CAGTGGTCGATATGTGTACC+AGG - chr8.2:14910943-14910962 MS.gene32465:intron 50.0%
CATCTCCATGTACAGCCGTT+CGG + chr8.2:14910719-14910738 None:intergenic 50.0%
CGCTTACAGAACCCAAACCA+CGG + chr8.2:14909181-14909200 None:intergenic 50.0%
CGGACCAACAATCGTAAGTG+TGG + chr8.2:14910699-14910718 None:intergenic 50.0%
CGGCAACGCAAGGGATATAT+CGG + chr8.2:14910432-14910451 None:intergenic 50.0%
CTGCATTTGTAGACGGCACA+GGG + chr8.2:14909423-14909442 None:intergenic 50.0%
GACTTCGTCTGATGTCCTCT+CGG - chr8.2:14910517-14910536 MS.gene32465:intron 50.0%
GATAAGTCCTCAACCGAGAC+AGG + chr8.2:14909647-14909666 None:intergenic 50.0%
GATTTGCACATCGCAGAGGT+TGG - chr8.2:14910802-14910821 MS.gene32465:intron 50.0%
GGACAATATGTAAGGCCCGT+AGG - chr8.2:14909323-14909342 MS.gene32465:CDS 50.0%
GGCAAGGTCTACTTCAGACA+AGG - chr8.2:14910278-14910297 MS.gene32465:CDS 50.0%
GTGAGGTCCGTATTTATCGG+AGG + chr8.2:14909211-14909230 None:intergenic 50.0%
TAATGAACCTCGGCAACGCA+AGG + chr8.2:14910442-14910461 None:intergenic 50.0%
TCCATGGGTGCAGTGTATTG+GGG + chr8.2:14910897-14910916 None:intergenic 50.0%
TCTGCATTTGTAGACGGCAC+AGG + chr8.2:14909424-14909443 None:intergenic 50.0%
TGTGGTAGGTTTCTGTGGCA+AGG + chr8.2:14910681-14910700 None:intergenic 50.0%
TTCGATAGACCTTGCGGTCA+CGG - chr8.2:14909360-14909379 MS.gene32465:CDS 50.0%
TTCTGGCAGAAGCCATACCA+CGG + chr8.2:14910656-14910675 None:intergenic 50.0%
TTGGGGTATGTCGGAAACCA+AGG + chr8.2:14910880-14910899 None:intergenic 50.0%
! AACGCTTTGGATGCTGCACA+AGG - chr8.2:14907688-14907707 MS.gene32465:CDS 50.0%
! ACCTGATTTGCACATCGCAG+AGG - chr8.2:14910798-14910817 MS.gene32465:intron 50.0%
! ACTGGACCGTCGTGATTTTG+GGG - chr8.2:14908972-14908991 MS.gene32465:intron 50.0%
! TTGCAAGGCGAAGAGTATGC+TGG - chr8.2:14910985-14911004 MS.gene32465:CDS 50.0%
!! ACTTCAGACAAGGCTGGTCT+AGG - chr8.2:14910288-14910307 MS.gene32465:CDS 50.0%
!! CTTCAGACAAGGCTGGTCTA+GGG - chr8.2:14910289-14910308 MS.gene32465:CDS 50.0%
AAACCTATGGTCAGCGGCAG+TGG - chr8.2:14910926-14910945 MS.gene32465:intron 55.0%
AAGGCCCGTAGGTTTGTCGA+AGG - chr8.2:14909334-14909353 MS.gene32465:CDS 55.0%
ACCCCAATACACTGCACCCA+TGG - chr8.2:14910893-14910912 MS.gene32465:intron 55.0%
AGCCATACCACGGCAAAGTC+TGG + chr8.2:14910646-14910665 None:intergenic 55.0%
CCAACGACCACACTCAAGCA+AGG + chr8.2:14908429-14908448 None:intergenic 55.0%
CCTTGCTTGAGTGTGGTCGT+TGG - chr8.2:14908426-14908445 MS.gene32465:CDS 55.0%
GAGGTTCGACTGTATCGCAG+AGG - chr8.2:14908775-14908794 MS.gene32465:intron 55.0%
GGAATGCTGTCATTGGCAGG+TGG - chr8.2:14907709-14907728 MS.gene32465:CDS 55.0%
TGATGTCCTCTCGGGCACTT+TGG - chr8.2:14910526-14910545 MS.gene32465:intron 55.0%
TTGGTCCGAACGGCTGTACA+TGG - chr8.2:14910711-14910730 MS.gene32465:intron 55.0%
! ACATCGCAGAGGTTGGTTGC+AGG - chr8.2:14910809-14910828 MS.gene32465:intron 55.0%
! CTGGACCGTCGTGATTTTGG+GGG - chr8.2:14908973-14908992 MS.gene32465:intron 55.0%
! TGGACCGTCGTGATTTTGGG+GGG - chr8.2:14908974-14908993 MS.gene32465:intron 55.0%
!! ACAAGGCTGGTCTAGGGTGA+AGG - chr8.2:14910295-14910314 MS.gene32465:CDS 55.0%
ACGACCTCGATCCTGTGCGA+AGG - chr8.2:14909619-14909638 MS.gene32465:CDS 60.0%
CGACCTCGATCCTGTGCGAA+GGG - chr8.2:14909620-14909639 MS.gene32465:CDS 60.0%
CTGTGCGAAGGGACCTGTCT+CGG - chr8.2:14909631-14909650 MS.gene32465:CDS 60.0%
GAAGGGACCTGTCTCGGTTG+AGG - chr8.2:14909637-14909656 MS.gene32465:CDS 60.0%
GATAGACCTTGCGGTCACGG+AGG - chr8.2:14909363-14909382 MS.gene32465:CDS 60.0%
TCTTCTCCTCCGTGACCGCA+AGG + chr8.2:14909372-14909391 None:intergenic 60.0%
CGACCACTGCCGCTGACCAT+AGG + chr8.2:14910932-14910951 None:intergenic 65.0%
CGAGACAGGTCCCTTCGCAC+AGG + chr8.2:14909633-14909652 None:intergenic 65.0%
GGTCCCTTCGCACAGGATCG+AGG + chr8.2:14909626-14909645 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 14907655 14911024 14907655 ID=MS.gene32465
chr8.2 mRNA 14907655 14911024 14907655 ID=MS.gene32465.t1;Parent=MS.gene32465
chr8.2 exon 14910952 14911024 14910952 ID=MS.gene32465.t1.exon1;Parent=MS.gene32465.t1
chr8.2 CDS 14910952 14911024 14910952 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14910102 14910316 14910102 ID=MS.gene32465.t1.exon2;Parent=MS.gene32465.t1
chr8.2 CDS 14910102 14910316 14910102 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14909614 14909997 14909614 ID=MS.gene32465.t1.exon3;Parent=MS.gene32465.t1
chr8.2 CDS 14909614 14909997 14909614 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14909171 14909507 14909171 ID=MS.gene32465.t1.exon4;Parent=MS.gene32465.t1
chr8.2 CDS 14909171 14909507 14909171 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14908990 14909069 14908990 ID=MS.gene32465.t1.exon5;Parent=MS.gene32465.t1
chr8.2 CDS 14908990 14909069 14908990 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14908132 14908518 14908132 ID=MS.gene32465.t1.exon6;Parent=MS.gene32465.t1
chr8.2 CDS 14908132 14908518 14908132 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
chr8.2 exon 14907655 14908032 14907655 ID=MS.gene32465.t1.exon7;Parent=MS.gene32465.t1
chr8.2 CDS 14907655 14908032 14907655 ID=cds.MS.gene32465.t1;Parent=MS.gene32465.t1
Gene Sequence

>MS.gene32465

ATGTCTGACTTAGGTGGGTTTGTTTTAACTGGAAACGCTTTGGATGCTGCACAAGGAATGCTGTCATTGGCAGGTGGCATCTTCAACTACTTATTTTTTTTAAGATGCATGTTACCTCTTTACTGTGGTTGTTTATGAGGAAAAAAAATCTATGGTTTTGATATTTAGTTATGTGTGTTCTGTTATCATAGTTGATTGCTTTGTACATGTCATATAACATGCCTTAGCATGTTAACAATATGTTCAATAGCGATCACGTTTTTTTTCCCTGTGTTGCATATCATTATTTTGATTTTTAATGCATGGTATAGATGTCCTAGAACATAGCTTTGCATGTCAACAATAAGTTCAGTAGATGAAATGAACAACATTTCGCATGTTCAGCCAATTTTGTATTCTTAAGATACATGTTTACTCTTTATTATGGTCCTTTAGGACAAAAAATATCTAGGGTTCTGAATTTTTTTGCAGTGTTTAATATCATTATATTTGATTCTTTTTGCATGATGTAACTGTGATATAGCATACCTTAGCAAGTTACCAGTATAGGTTCTATGACAGCGAAATTTTTTCCATGCCTCTGATATCGTTATGTTTGATCATTTATGCATAATATAAAATATAAATGGCACATGACATACCTTTGCATGTTTATAACAAGTTCATTAGCAACCAAATGTTTTTTTCAATCTTTTTACATTAACCCAGCCCATCAGAGTAACAAGAAGCCTTACTTTTTCCCTTTTATGCCTCCTAATATTGTGATCTGCTCCTTGCTTGAGTGTGGTCGTTGGTTTTATCCAAAGCTGATTTGCAGCATGCATGAAAATGTTGTAGGTGGGGGTAACGACTTTCATCCAACGTATACCCCAAGTGAGATGGCAATGATGAGGACATACTTCCTTGAATTTGACACTATGTCTGTAAGTGTTGTTAAATAATTTTGTCTCCGACCATTCTAATAGATGAGGACATACTTCCTGCCAATAAATGTGTTTGATGCTAATGCGCGTGTTAATTTTCGTAGGGAATGGGTCGGATGCCTAACTGCTTTTTGAAAGACTATGGTGGTTATATTGAAGACTACGTTATGTTGCGAGATCCAATGAACAATGAGATTGAGGTTCGACTGTATCGCAGAGGCGACAAGCTTTATATGAGGAAAGGTTGGTATGGACTGAAGGACTTCTACAACATTGAGCTTGGTGCATGGATAGACTTGACATATGAAAGACCAAATCTTATGACCTTGACGATCAACAACAGATTTTTCGAGGAAATTTTGTATCCTGCTCACACTACTCCAATAATATCCAAACTGGACCGTCGTGATTTTGGGGGGAATTTGGATGATTTTTTTGAGACATTCACTATTGAATTGACTTACTCGGATGTTAACTCAGGATGTTTGGTATTCACTGTGGATTGCTTTATATTTCCGTTGTGTTATTGTTTATTTCTTAAATGATATTTCTGTTTGTGTTTAGTAACGGTGTTTATTATTTCATCTGCATTAGACATTGCCGTGGTTTGGGTTCTGTAAGCGCGTGTTACCTCCGATAAATACGGACCTCACTGTCATTGATTACGTTGGATTTGCCTGGAGATGTGACCTAAAGTTCATTCAGCGTGACAAGACTCCTATGTGTACAATTGAAGGTGATTGGGGGACAATATGTAAGGCCCGTAGGTTTGTCGAAGGTCGTTCGATAGACCTTGCGGTCACGGAGGAGAAGAATAATTATGTGCTTTACTTGAAATTTATCCCTGTGCCGTCTACAAATGCAGATTTGATTAGAGGCATTGATCCAAGGTTCATATTGCAGTCTGATGCTTCTATATTCTGTTTCCAAGGTTATGCATTTTGTACCCTGAACTGAAGTATATGTTGTTTATTCTGTCCGGCAATTTGATTGTTATTCGTGCCAATGAATTTATATGGTTTTTTATTACAGACTCTGCTAACGACCTCGATCCTGTGCGAAGGGACCTGTCTCGGTTGAGGACTTATCGTCTCGAGCTAGATAGCGACATTGTGAGATCTCTGTCTTCTTATTAGTGCAATTGTACTAAAAATTTGTGTAATTTATGTGCCTTTTAACCACCAAGTTTTGTTTATGCTGCGTTGTTCTTAAATTTTAAAATTTTCACGACAACAATAAGGATAGTACATTCTAATTTGAATATATGGTTGAAGAGTGTAAGTGGATAAAATGATGCAGACCGGATTTGTAGAGAGTAATAGAAGTTTTTGCATATACGAATCTGAGATTCAGACATAATTGATAATAGTTATCATAAACTCTGTCTAGGATTGCTGATCTCAGACGCCGAAAAAATTTGTACGTTAGTTTTGTGCGGTGGTTATTGTATTCATGTCTGAAATAGAAACCATGGCTGAACTTTATCTGTCAGATATACTTTCTTATGTCCGGCATAAATTTATGTTAACATTTTCTATTATGGTTTCCTATCTAATATCATAAGGTGTGTCCTTATTTAGCAGTTAAAGGCGAGGTTACCTTCATGTTTTGCAAAAGAAGTAGGCGTGCATATTGATGATCATGTTATGCTTCGTGATCCAAACAACAATATCATTGTTGTTGAAGTTCAGAAAAAGAATGGCAAGGTCTACTTCAGACAAGGCTGGTCTAGGGTGAAGGATATTTATAACATTGTAGATGGTGCATGGGTCTATCTGAAATATGCGGGGCCTAATCTACTACTCATGACCATAAGAAACAAGGCTGGATTGGAGATACCATATCCATTATCCGATATATCCCTTGCGTTGCCGAGGTTCATTACTTCATCAGGGGAGAGCCAGTTAGTGCATTTTTTCCGCACATCTGTCAAGATTTTGACTTCGTCTGATGTCCTCTCGGGCACTTTGGTATATAATTTGCACTAATTGGTTAATATAATTAGATATTTGGTTATTTCGTTCATTCGATTATAAGGTTATCTTACTGTTTGTTGGTTGTTTAACCAGACTTTGCCGTGGTATGGCTTCTGCCAGAAATCCTTGCCACAGAAACCTACCACACTTACGATTGTTGGTCCGAACGGCTGTACATGGAGATGTGATCTGACCTTCGCTGTTGCAAATAATATGCCTTATGCTATGATTGGTGGTGATTGGAACCTGATTTGCACATCGCAGAGGTTGGTTGCAGGCCATGCAGTTAAGTTCGCTGTTGTCCATGACAAAGATAACACAGTCCTTGGTTTCCGACATACCCCAATACACTGCACCCATGGATACTATGTGAAACCTATGGTCAGCGGCAGTGGTCGATATGTGTACCAGGTCAATCACTATCTCAAATATTGCAAGGCGAAGAGTATGCTGGAACAGATGTCGGGATGA
Protein sequence

>MS.gene32465.t1

MSDLGGFVLTGNALDAAQGMLSLAAHQSNKKPYFFPFMPPNIVICSLLECGRWFYPKLICSMHENVVGGGNDFHPTYTPSEMAMMRTYFLEFDTMSGMGRMPNCFLKDYGGYIEDYVMLRDPMNNEIEVRLYRRGDKLYMRKGWYGLKDFYNIELGAWIDLTYERPNLMTLTINNRFFEEILYPAHTTPIISKLDRRDFGGNLDDFFETFTIELTYSDVNSGCLTLPWFGFCKRVLPPINTDLTVIDYVGFAWRCDLKFIQRDKTPMCTIEGDWGTICKARRFVEGRSIDLAVTEEKNNYVLYLKFIPVPSTNADLIRGIDPRFILQSDASIFCFQDSANDLDPVRRDLSRLRTYRLELDSDILKARLPSCFAKEVGVHIDDHVMLRDPNNNIIVVEVQKKNGKVYFRQGWSRVKDIYNIVDGAWVYLKYAGPNLLLMTIRNKAGLEIPYPLSDISLALPRFITSSGESQLVHFFRTSVKILTSSDVLSGTLTLPWYGFCQKSLPQKPTTLTIVGPNGCTWRCDLTFAVANNMPYAMIGGDWNLICTSQRLVAGHAVKFAVVHDKDNTVLGFRHTPIHCTHGYYVKPMVSGSGRYVYQVNHYLKYCKAKSMLEQMSG