Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32488.t1 | RHN57038.1 | 98.6 | 504 | 7 | 0 | 1 | 504 | 113 | 616 | 6.20E-305 | 1055.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32488.t1 | Q0WSN2 | 66.6 | 512 | 152 | 7 | 8 | 504 | 21 | 528 | 9.3e-201 | 701.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32488.t1 | G7K212 | 98.6 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 4.5e-305 | 1055.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene32488.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32488.t1 | MTR_5g081160 | 98.611 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1041 |
| MS.gene32488.t1 | MTR_3g069410 | 73.114 | 517 | 122 | 5 | 1 | 504 | 1 | 513 | 0.0 | 769 |
| MS.gene32488.t1 | MTR_5g018900 | 51.521 | 526 | 199 | 8 | 32 | 503 | 1 | 524 | 0.0 | 522 |
| MS.gene32488.t1 | MTR_1g021835 | 52.818 | 479 | 208 | 7 | 32 | 503 | 1 | 468 | 5.50e-177 | 506 |
| MS.gene32488.t1 | MTR_8g078410 | 51.679 | 536 | 190 | 9 | 32 | 503 | 1 | 531 | 1.67e-175 | 504 |
| MS.gene32488.t1 | MTR_1g021835 | 52.128 | 376 | 162 | 7 | 32 | 400 | 1 | 365 | 2.91e-135 | 398 |
| MS.gene32488.t1 | MTR_1g021835 | 49.206 | 315 | 147 | 4 | 32 | 340 | 1 | 308 | 1.45e-106 | 321 |
| MS.gene32488.t1 | MTR_5g018910 | 40.171 | 117 | 70 | 0 | 141 | 257 | 496 | 612 | 6.15e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32488.t1 | AT2G39830 | 66.602 | 512 | 152 | 8 | 8 | 504 | 21 | 528 | 0.0 | 667 |
| MS.gene32488.t1 | AT2G39830 | 66.214 | 515 | 152 | 9 | 8 | 504 | 21 | 531 | 0.0 | 662 |
| MS.gene32488.t1 | AT2G39830 | 66.208 | 509 | 150 | 8 | 8 | 504 | 21 | 519 | 0.0 | 659 |
| MS.gene32488.t1 | AT2G39830 | 65.000 | 420 | 132 | 7 | 8 | 416 | 21 | 436 | 0.0 | 538 |
| MS.gene32488.t1 | AT4G36860 | 61.520 | 421 | 147 | 4 | 92 | 503 | 139 | 553 | 1.28e-179 | 516 |
| MS.gene32488.t1 | AT4G36860 | 61.520 | 421 | 147 | 4 | 92 | 503 | 163 | 577 | 3.50e-179 | 515 |
| MS.gene32488.t1 | AT1G19270 | 48.127 | 534 | 214 | 7 | 32 | 504 | 1 | 532 | 1.58e-171 | 494 |
| MS.gene32488.t1 | AT1G19270 | 48.127 | 534 | 214 | 7 | 32 | 504 | 1 | 532 | 1.58e-171 | 494 |
| MS.gene32488.t1 | AT4G36860 | 61.180 | 322 | 112 | 3 | 92 | 406 | 139 | 454 | 6.13e-138 | 406 |
| MS.gene32488.t1 | AT5G66610 | 50.418 | 359 | 168 | 5 | 142 | 497 | 73 | 424 | 1.43e-115 | 348 |
| MS.gene32488.t1 | AT5G66610 | 50.418 | 359 | 168 | 5 | 142 | 497 | 200 | 551 | 9.69e-115 | 350 |
| MS.gene32488.t1 | AT5G66620 | 48.907 | 366 | 166 | 5 | 142 | 496 | 285 | 640 | 3.95e-114 | 351 |
| MS.gene32488.t1 | AT5G66620 | 41.866 | 461 | 238 | 7 | 56 | 496 | 181 | 631 | 6.33e-114 | 350 |
| MS.gene32488.t1 | AT5G66620 | 41.866 | 461 | 238 | 7 | 56 | 496 | 181 | 631 | 6.33e-114 | 350 |
| MS.gene32488.t1 | AT5G66610 | 46.891 | 386 | 168 | 6 | 142 | 497 | 200 | 578 | 7.25e-109 | 336 |
| MS.gene32488.t1 | AT5G66630 | 45.902 | 366 | 174 | 7 | 142 | 496 | 346 | 698 | 3.72e-102 | 322 |
| MS.gene32488.t1 | AT5G66640 | 47.009 | 351 | 169 | 5 | 161 | 496 | 90 | 438 | 1.19e-100 | 310 |
| MS.gene32488.t1 | AT5G66640 | 47.009 | 351 | 169 | 5 | 161 | 496 | 90 | 438 | 1.19e-100 | 310 |
| MS.gene32488.t1 | AT5G66640 | 47.009 | 351 | 169 | 5 | 161 | 496 | 122 | 470 | 3.82e-100 | 310 |
| MS.gene32488.t1 | AT5G66640 | 47.009 | 351 | 169 | 5 | 161 | 496 | 121 | 469 | 4.27e-100 | 310 |
| MS.gene32488.t1 | AT5G17890 | 48.767 | 365 | 173 | 7 | 143 | 496 | 1240 | 1601 | 2.62e-97 | 322 |
| MS.gene32488.t1 | AT5G66640 | 48.000 | 325 | 154 | 4 | 187 | 496 | 7 | 331 | 9.47e-97 | 296 |
| MS.gene32488.t1 | AT5G66640 | 42.450 | 351 | 181 | 6 | 161 | 496 | 121 | 465 | 1.18e-83 | 267 |
| MS.gene32488.t1 | AT5G66640 | 42.450 | 351 | 181 | 6 | 161 | 496 | 122 | 466 | 1.21e-83 | 267 |
| MS.gene32488.t1 | AT5G66620 | 44.105 | 229 | 114 | 4 | 142 | 366 | 276 | 494 | 3.59e-62 | 211 |
Find 114 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGCAAACTTCACATTT+TGG | 0.126071 | 5.1:+63131296 | None:intergenic |
| AGGCATAAACCTCTTGTTTC+TGG | 0.186251 | 5.1:+63130168 | None:intergenic |
| AATATGTGTATATACCTTTA+AGG | 0.205624 | 5.1:+63129669 | None:intergenic |
| GTCTCATGTTGAAAACAAAT+TGG | 0.214527 | 5.1:-63129423 | MS.gene32488:CDS |
| TTAAAACAAGATTTGTGATA+TGG | 0.216060 | 5.1:+63131332 | None:intergenic |
| ATAATCTATGGAAATTGTTT+AGG | 0.254459 | 5.1:-63131541 | MS.gene32488:CDS |
| CTGTATTCATTGGGATAAAA+TGG | 0.256062 | 5.1:+63131678 | None:intergenic |
| AATGAAGCTGTTAATAAATA+TGG | 0.258522 | 5.1:-63129332 | MS.gene32488:CDS |
| ACAGCAATTCTTGTTCTATA+TGG | 0.261118 | 5.1:-63129920 | MS.gene32488:CDS |
| CATGAGATGGACAATACTTT+TGG | 0.265205 | 5.1:+63130657 | None:intergenic |
| CATGCATGGTTACGCCTTAA+AGG | 0.286050 | 5.1:-63129683 | MS.gene32488:intron |
| AGTATAGATGCCACCCCTTT+TGG | 0.293022 | 5.1:-63130682 | MS.gene32488:CDS |
| GGAGAAAATGATGAAGATTA+TGG | 0.298017 | 5.1:-63131756 | MS.gene32488:CDS |
| AATGATTCTTCTCCAGCTTA+TGG | 0.306927 | 5.1:-63129374 | MS.gene32488:CDS |
| CTTTCTCATCCATGTATATA+TGG | 0.313577 | 5.1:-63133316 | MS.gene32488:intron |
| ATTGGAGGCCATAGACTTAT+AGG | 0.316467 | 5.1:-63129986 | MS.gene32488:CDS |
| AAGATTTCACCTGTATTCAT+TGG | 0.335163 | 5.1:+63131668 | None:intergenic |
| AACTACCTCGCGCTCGGTAA+TGG | 0.338884 | 5.1:+63131462 | None:intergenic |
| ATCAAACCAGCAGCATTTAT+AGG | 0.343784 | 5.1:+63130707 | None:intergenic |
| GAAAGTCTGGTTTCATGAAA+TGG | 0.348540 | 5.1:-63132757 | MS.gene32488:CDS |
| AACAAGAGGTTTATGCCTTT+CGG | 0.351720 | 5.1:-63130163 | MS.gene32488:CDS |
| ACGACCACTCCTTCCTCTAT+TGG | 0.353168 | 5.1:+63132709 | None:intergenic |
| GTGCATGGAATCTGCTATAA+TGG | 0.356084 | 5.1:-63130424 | MS.gene32488:CDS |
| ACTACCTCGCGCTCGGTAAT+GGG | 0.362527 | 5.1:+63131463 | None:intergenic |
| TAATCTATGGAAATTGTTTA+GGG | 0.366146 | 5.1:-63131540 | MS.gene32488:CDS |
| AGTCTATGGCCTCCAATTCT+TGG | 0.369796 | 5.1:+63129992 | None:intergenic |
| CAGAAGGAGAAAGAGGATTT+AGG | 0.374040 | 5.1:-63131945 | MS.gene32488:CDS |
| GCACTTAATGATGCTATTGT+TGG | 0.375277 | 5.1:-63130297 | MS.gene32488:CDS |
| ATGAAACCAGACTTTCTCTC+TGG | 0.376624 | 5.1:+63132764 | None:intergenic |
| CCATGCAATGTCACTTTCTT+CGG | 0.377621 | 5.1:-63131922 | MS.gene32488:CDS |
| TTCTCATGCCTATAAGTCTA+TGG | 0.380772 | 5.1:+63129978 | None:intergenic |
| AACCTCTTGTTTCTGGCAAA+TGG | 0.381781 | 5.1:+63130175 | None:intergenic |
| CATTAGCCCATCAAGGATAT+AGG | 0.386946 | 5.1:-63131785 | MS.gene32488:intron |
| ATGGCATGCAGGTTACTAAC+AGG | 0.396063 | 5.1:-63129731 | MS.gene32488:intron |
| CTCGAACATATTCGTTTGAC+TGG | 0.400738 | 5.1:-63129296 | MS.gene32488:CDS |
| CATAATAATCTCTGATTGAA+TGG | 0.404836 | 5.1:+63130376 | None:intergenic |
| CTGTAGTTGTGAAAGATTAG+AGG | 0.408619 | 5.1:-63130612 | MS.gene32488:intron |
| TGCAATCAGGAGATAATCTA+TGG | 0.410658 | 5.1:-63131553 | MS.gene32488:CDS |
| TGTTGTTTCAGATTCATAGA+AGG | 0.415721 | 5.1:-63130015 | MS.gene32488:intron |
| TTGTTTACCAAAGCTCTAGA+TGG | 0.420805 | 5.1:+63132644 | None:intergenic |
| GAATCTGCTATAATGGATAC+TGG | 0.421279 | 5.1:-63130417 | MS.gene32488:CDS |
| ATTCATAGAAGGCCAAGAAT+TGG | 0.426756 | 5.1:-63130004 | MS.gene32488:CDS |
| AGATTTCACCTGTATTCATT+GGG | 0.428419 | 5.1:+63131669 | None:intergenic |
| CATATGCCTTCCTCTACTTC+AGG | 0.435073 | 5.1:+63129557 | None:intergenic |
| TTCAAAGGTGGGTCCAATAG+AGG | 0.438064 | 5.1:-63132722 | MS.gene32488:CDS |
| TCAATCAGAGATTATTATGA+AGG | 0.445893 | 5.1:-63130372 | MS.gene32488:CDS |
| CAAGACATGCCTTCCTCTGC+AGG | 0.450171 | 5.1:+63132674 | None:intergenic |
| TCTTCTCCAGCTTATGGTGG+TGG | 0.452845 | 5.1:-63129368 | MS.gene32488:CDS |
| TCTCATGTTGAAAACAAATT+GGG | 0.452858 | 5.1:-63129422 | MS.gene32488:CDS |
| GCGTGCTCCATCTAGAGCTT+TGG | 0.454192 | 5.1:-63132651 | MS.gene32488:intron |
| TAAAATGGTGCAGGAGCATA+AGG | 0.458370 | 5.1:+63131693 | None:intergenic |
| CAGATTCCTATAAATGCTGC+TGG | 0.468618 | 5.1:-63130713 | MS.gene32488:CDS |
| TGGAAATTGTTTAGGGTGCA+TGG | 0.469911 | 5.1:-63131533 | MS.gene32488:CDS |
| AGACTTTGCACCTTTCTTTG+AGG | 0.470152 | 5.1:+63129442 | None:intergenic |
| GAGTGGCATCGAAAGCAGTC+TGG | 0.476246 | 5.1:+63131496 | None:intergenic |
| ATGCAATGAGAGTTTGTTGC+TGG | 0.480588 | 5.1:+63129494 | None:intergenic |
| TCACACCCAGAGAGAAAGTC+TGG | 0.482353 | 5.1:-63132770 | MS.gene32488:CDS |
| GAAGATATGAAGAGACCAAA+TGG | 0.499622 | 5.1:-63131897 | MS.gene32488:intron |
| TTCTCTTTCAACAAGAAGCA+TGG | 0.501914 | 5.1:+63130320 | None:intergenic |
| CTAAAACCACCACCATAAGC+TGG | 0.509878 | 5.1:+63129362 | None:intergenic |
| CTGCAGAGGAAGGCATGTCT+TGG | 0.516391 | 5.1:-63132673 | MS.gene32488:CDS |
| TAGAGCTCAGAAGGAGAAAG+AGG | 0.516816 | 5.1:-63131952 | MS.gene32488:CDS |
| ACCATGCATGCATCAACTCA+TGG | 0.520688 | 5.1:+63129696 | None:intergenic |
| TGATCGTGCTAGAGCTCAGA+AGG | 0.527771 | 5.1:-63131961 | MS.gene32488:CDS |
| TTATTTGCATTAGCCCATCA+AGG | 0.527904 | 5.1:-63131792 | MS.gene32488:intron |
| TCTCTGATTGAATGGTATAG+AGG | 0.533543 | 5.1:+63130384 | None:intergenic |
| GGATCAAACTACCTCGCGCT+CGG | 0.536169 | 5.1:+63131456 | None:intergenic |
| GCTGCTTCTTCCTCAAAGAA+AGG | 0.536522 | 5.1:-63129452 | MS.gene32488:CDS |
| CATAGAAGGCCAAGAATTGG+AGG | 0.541624 | 5.1:-63130001 | MS.gene32488:CDS |
| GTCAGGTTCTGTCATATATG+TGG | 0.544593 | 5.1:-63129535 | MS.gene32488:CDS |
| TCTCTTTCAACAAGAAGCAT+GGG | 0.545613 | 5.1:+63130321 | None:intergenic |
| AAGCTTGTGCTTAGAGTGCA+TGG | 0.547235 | 5.1:-63130439 | MS.gene32488:CDS |
| CCCATCAAGGATATAGGTGG+GGG | 0.548766 | 5.1:-63131779 | MS.gene32488:CDS |
| CACCATTTGCCAGAAACAAG+AGG | 0.548780 | 5.1:-63130177 | MS.gene32488:CDS |
| TCATTGGGATAAAATGGTGC+AGG | 0.553987 | 5.1:+63131684 | None:intergenic |
| TGAAACCAGACTTTCTCTCT+GGG | 0.553994 | 5.1:+63132765 | None:intergenic |
| CATTATGATCCTGCAGAGGA+AGG | 0.555932 | 5.1:-63132683 | MS.gene32488:CDS |
| CCGAAGAAAGTGACATTGCA+TGG | 0.560644 | 5.1:+63131922 | None:intergenic |
| AACATGTGTTCTTATTACAC+AGG | 0.561919 | 5.1:+63129266 | None:intergenic |
| GATTCTTCTCCAGCTTATGG+TGG | 0.562395 | 5.1:-63129371 | MS.gene32488:CDS |
| AGTAGAGGAAGGCATATGTC+AGG | 0.562990 | 5.1:-63129552 | MS.gene32488:CDS |
| CTATAGTATTTCGTATTCCG+AGG | 0.568127 | 5.1:+63130477 | None:intergenic |
| CCATGCATGCATCAACTCAT+GGG | 0.575521 | 5.1:+63129697 | None:intergenic |
| AGCCCATCAAGGATATAGGT+GGG | 0.576893 | 5.1:-63131781 | MS.gene32488:CDS |
| CCCATGAGTTGATGCATGCA+TGG | 0.580940 | 5.1:-63129697 | MS.gene32488:CDS |
| AGCAACAAACTCTCATTGCA+TGG | 0.581985 | 5.1:-63129492 | MS.gene32488:CDS |
| TCACAGTTTGCTCTTCCGAA+AGG | 0.583186 | 5.1:+63130148 | None:intergenic |
| AAATGATGAAGATTATGGAA+AGG | 0.584158 | 5.1:-63131751 | MS.gene32488:CDS |
| GTATTGTCATATTCATGAGA+TGG | 0.585321 | 5.1:+63130644 | None:intergenic |
| GCCCATCAAGGATATAGGTG+GGG | 0.591148 | 5.1:-63131780 | MS.gene32488:CDS |
| CAATCTCAGTCCTGAAGTAG+AGG | 0.592599 | 5.1:-63129567 | MS.gene32488:CDS |
| TGAGGAAGAAGCAGCAGCTG+TGG | 0.594186 | 5.1:+63129460 | None:intergenic |
| TAGCCCATCAAGGATATAGG+TGG | 0.597899 | 5.1:-63131782 | MS.gene32488:CDS |
| TGATTGATATGATCAGAAGA+AGG | 0.604305 | 5.1:+63133340 | None:intergenic |
| CATCAAGGATATAGGTGGGG+GGG | 0.609524 | 5.1:-63131777 | MS.gene32488:CDS |
| CATTGAACAGAAGACTATGT+GGG | 0.609543 | 5.1:-63131579 | MS.gene32488:intron |
| AATACTATAGACTCGAGGAC+GGG | 0.611229 | 5.1:-63130464 | MS.gene32488:CDS |
| CTCAGTCCTGAAGTAGAGGA+AGG | 0.619865 | 5.1:-63129563 | MS.gene32488:CDS |
| AATGGTGCAGGAGCATAAGG+AGG | 0.625823 | 5.1:+63131696 | None:intergenic |
| AGTAAAGTACCATATATACA+TGG | 0.626223 | 5.1:+63133307 | None:intergenic |
| TTCTCCCATTACCGAGCGCG+AGG | 0.628667 | 5.1:-63131467 | MS.gene32488:intron |
| AAGGTGGGTCCAATAGAGGA+AGG | 0.645391 | 5.1:-63132718 | MS.gene32488:CDS |
| ATTGAACAGAAGACTATGTG+GGG | 0.648467 | 5.1:-63131578 | MS.gene32488:intron |
| AAATACTATAGACTCGAGGA+CGG | 0.654015 | 5.1:-63130465 | MS.gene32488:CDS |
| GCATTGAACAGAAGACTATG+TGG | 0.658253 | 5.1:-63131580 | MS.gene32488:intron |
| TTGTTCTATATGGTCTACCA+AGG | 0.659611 | 5.1:-63129910 | MS.gene32488:intron |
| ACATGTGTTCTTATTACACA+GGG | 0.664721 | 5.1:+63129267 | None:intergenic |
| GGGTCCAATAGAGGAAGGAG+TGG | 0.672837 | 5.1:-63132713 | MS.gene32488:CDS |
| ATGGTGCAGGAGCATAAGGA+GGG | 0.678829 | 5.1:+63131697 | None:intergenic |
| CCATCAAGGATATAGGTGGG+GGG | 0.680331 | 5.1:-63131778 | MS.gene32488:CDS |
| TAATGGGAGAATGACAAGAG+TGG | 0.685159 | 5.1:+63131479 | None:intergenic |
| TACGAAATACTATAGACTCG+AGG | 0.695310 | 5.1:-63130469 | MS.gene32488:CDS |
| TCATCATTATGATCCTGCAG+AGG | 0.695986 | 5.1:-63132687 | MS.gene32488:CDS |
| TTGAACAGAAGACTATGTGG+GGG | 0.724066 | 5.1:-63131577 | MS.gene32488:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACTTAAATACTTAAATT+AGG | + | chr5.1:63129794-63129813 | None:intergenic | 10.0% |
| !! | GATAATAATTGAATATAATA+TGG | + | chr5.1:63130568-63130587 | None:intergenic | 10.0% |
| !! | TATAGATTAAAGTTATTCAT+TGG | + | chr5.1:63132093-63132112 | None:intergenic | 15.0% |
| !!! | ATACTTTTTTGACTTATTTT+TGG | - | chr5.1:63130425-63130444 | MS.gene32488:CDS | 15.0% |
| !!! | ATTTTGCTATCATTTATAAT+TGG | - | chr5.1:63131009-63131028 | MS.gene32488:intron | 15.0% |
| !!! | TAAAATTGAAATGTTTTTAC+CGG | - | chr5.1:63132864-63132883 | MS.gene32488:intron | 15.0% |
| !!! | TTCATTTGATTTCATTAAAA+GGG | - | chr5.1:63129523-63129542 | MS.gene32488:CDS | 15.0% |
| !!! | TTTCATTTGATTTCATTAAA+AGG | - | chr5.1:63129522-63129541 | MS.gene32488:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTGACTCA+AGG | - | chr5.1:63130604-63130623 | MS.gene32488:intron | 15.0% |
| !! | AAAATTAAGTAACAACCATT+TGG | + | chr5.1:63130747-63130766 | None:intergenic | 20.0% |
| !! | AACAATATAGAGTAATTAAG+AGG | + | chr5.1:63132415-63132434 | None:intergenic | 20.0% |
| !! | AATATGTGTATATACCTTTA+AGG | + | chr5.1:63132960-63132979 | None:intergenic | 20.0% |
| !! | AATGAAGCTGTTAATAAATA+TGG | - | chr5.1:63133294-63133313 | MS.gene32488:intron | 20.0% |
| !! | AATTATGAAACAATTTAGAG+TGG | + | chr5.1:63132054-63132073 | None:intergenic | 20.0% |
| !! | ACAATACTATTGATGTAATT+AGG | - | chr5.1:63130641-63130660 | MS.gene32488:CDS | 20.0% |
| !! | ATAATCTATGGAAATTGTTT+AGG | - | chr5.1:63131085-63131104 | MS.gene32488:intron | 20.0% |
| !! | GTATTATTTGGACTAATAAT+TGG | - | chr5.1:63130493-63130512 | MS.gene32488:intron | 20.0% |
| !! | GTTATTGAATCATGAAAATT+TGG | - | chr5.1:63129809-63129828 | MS.gene32488:intron | 20.0% |
| !! | TAATCTATGGAAATTGTTTA+GGG | - | chr5.1:63131086-63131105 | MS.gene32488:intron | 20.0% |
| !! | TTAAAACAAGATTTGTGATA+TGG | + | chr5.1:63131297-63131316 | None:intergenic | 20.0% |
| !! | TTGAATATAATCACATATGT+CGG | - | chr5.1:63129689-63129708 | MS.gene32488:CDS | 20.0% |
| !!! | TAAATTGATGATTCACTAAA+TGG | + | chr5.1:63132820-63132839 | None:intergenic | 20.0% |
| !!! | TGATCTACAATTTTTTCATA+AGG | + | chr5.1:63132788-63132807 | None:intergenic | 20.0% |
| !!! | TGATTCTTATTTGTTATGAA+TGG | - | chr5.1:63130046-63130065 | MS.gene32488:intron | 20.0% |
| !!! | TTTTCATATGAATCCAAAAA+AGG | - | chr5.1:63129570-63129589 | MS.gene32488:CDS | 20.0% |
| ! | AAATGATGAAGATTATGGAA+AGG | - | chr5.1:63130875-63130894 | MS.gene32488:intron | 25.0% |
| ! | AAGTGAGACTTAGTATTATT+TGG | - | chr5.1:63130481-63130500 | MS.gene32488:intron | 25.0% |
| ! | AAGTTCAAATAATAGCATCA+TGG | + | chr5.1:63129495-63129514 | None:intergenic | 25.0% |
| ! | AGTTCAAATAATAGCATCAT+GGG | + | chr5.1:63129494-63129513 | None:intergenic | 25.0% |
| ! | ATTGAATCATGAAAATTTGG+TGG | - | chr5.1:63129812-63129831 | MS.gene32488:intron | 25.0% |
| ! | CAACAAACAAAAAAATAGTC+AGG | + | chr5.1:63131246-63131265 | None:intergenic | 25.0% |
| ! | CATAATAATCTCTGATTGAA+TGG | + | chr5.1:63132253-63132272 | None:intergenic | 25.0% |
| ! | CTTATGTCATAGTTCTTATA+AGG | + | chr5.1:63131433-63131452 | None:intergenic | 25.0% |
| ! | CTTATTATGTACTAAATCCA+CGG | - | chr5.1:63130251-63130270 | MS.gene32488:intron | 25.0% |
| ! | GAAGTAAATTATCAATGAGA+GGG | + | chr5.1:63131533-63131552 | None:intergenic | 25.0% |
| ! | GCGTTAACATAGTAATTATT+TGG | + | chr5.1:63130295-63130314 | None:intergenic | 25.0% |
| ! | GGAAGATTAATCTTACAAAT+TGG | + | chr5.1:63131353-63131372 | None:intergenic | 25.0% |
| ! | TCAATCAGAGATTATTATGA+AGG | - | chr5.1:63132254-63132273 | MS.gene32488:intron | 25.0% |
| ! | TCTCATGTTGAAAACAAATT+GGG | - | chr5.1:63133204-63133223 | MS.gene32488:intron | 25.0% |
| ! | TGAAGAAAAATGAAATTGAG+TGG | + | chr5.1:63130010-63130029 | None:intergenic | 25.0% |
| ! | TGAAGTAAATTATCAATGAG+AGG | + | chr5.1:63131534-63131553 | None:intergenic | 25.0% |
| ! | TGTGTTAAAATATCATACAC+TGG | + | chr5.1:63132504-63132523 | None:intergenic | 25.0% |
| ! | TTTCATAAGGTAATTTCTGA+GGG | + | chr5.1:63132775-63132794 | None:intergenic | 25.0% |
| ! | TTTGAATATCAAAGTGCATA+AGG | + | chr5.1:63129400-63129419 | None:intergenic | 25.0% |
| !! | AGTAAAGTACCATATATACA+TGG | + | chr5.1:63129322-63129341 | None:intergenic | 25.0% |
| !! | ATTATTTGGTGATTTGTAAG+AGG | + | chr5.1:63130281-63130300 | None:intergenic | 25.0% |
| !! | CAAAATTTTCTTAAGTGAGT+CGG | + | chr5.1:63129448-63129467 | None:intergenic | 25.0% |
| !! | CATATTTTTCATCCTTATGT+TGG | - | chr5.1:63132974-63132993 | MS.gene32488:intron | 25.0% |
| !! | TGTTTTCTTTGATTAGAATG+TGG | - | chr5.1:63132532-63132551 | MS.gene32488:intron | 25.0% |
| !! | TTTTCATAAGGTAATTTCTG+AGG | + | chr5.1:63132776-63132795 | None:intergenic | 25.0% |
| !!! | AAGTTATTCATTGGTTGTTT+TGG | + | chr5.1:63132084-63132103 | None:intergenic | 25.0% |
| !!! | AGTATACTTTCTAAAGTTTG+AGG | + | chr5.1:63130410-63130429 | None:intergenic | 25.0% |
| !!! | CATTTTCTTATTAGCTTTTG+AGG | + | chr5.1:63132679-63132698 | None:intergenic | 25.0% |
| !!! | GTTTTTACCGGATATTTTTA+TGG | - | chr5.1:63132876-63132895 | MS.gene32488:intron | 25.0% |
| !!! | TGTGTGATTTTTTAGAAACA+TGG | - | chr5.1:63130181-63130200 | MS.gene32488:CDS | 25.0% |
| !!! | TTCTTATTTGTTATGAATGG+AGG | - | chr5.1:63130049-63130068 | MS.gene32488:intron | 25.0% |
| AAGATTTCACCTGTATTCAT+TGG | + | chr5.1:63130961-63130980 | None:intergenic | 30.0% | |
| AATTATCAATGAGAGGGAAA+TGG | + | chr5.1:63131527-63131546 | None:intergenic | 30.0% | |
| ACAGCAATTCTTGTTCTATA+TGG | - | chr5.1:63132706-63132725 | MS.gene32488:CDS | 30.0% | |
| AGAAAAAGAGAAAAGAGAGA+TGG | + | chr5.1:63129347-63129366 | None:intergenic | 30.0% | |
| AGAATAACTTGAGTAAGCAA+AGG | + | chr5.1:63131374-63131393 | None:intergenic | 30.0% | |
| AGATTTCACCTGTATTCATT+GGG | + | chr5.1:63130960-63130979 | None:intergenic | 30.0% | |
| AGTCATGTATACTTAGAAGT+TGG | + | chr5.1:63133004-63133023 | None:intergenic | 30.0% | |
| ATATGTGTCTATGCTATAAG+TGG | + | chr5.1:63131654-63131673 | None:intergenic | 30.0% | |
| CTAAAAAATCACACACATGT+TGG | + | chr5.1:63130176-63130195 | None:intergenic | 30.0% | |
| CTGTATTCATTGGGATAAAA+TGG | + | chr5.1:63130951-63130970 | None:intergenic | 30.0% | |
| CTTTCTCATCCATGTATATA+TGG | - | chr5.1:63129310-63129329 | MS.gene32488:CDS | 30.0% | |
| GAAACATATGTGTAACTAAG+GGG | + | chr5.1:63130137-63130156 | None:intergenic | 30.0% | |
| GATCTCAAAATCTCATAAAG+AGG | + | chr5.1:63131194-63131213 | None:intergenic | 30.0% | |
| GGAAACATATGTGTAACTAA+GGG | + | chr5.1:63130138-63130157 | None:intergenic | 30.0% | |
| GGAGAAAATGATGAAGATTA+TGG | - | chr5.1:63130870-63130889 | MS.gene32488:intron | 30.0% | |
| GTATTGTCATATTCATGAGA+TGG | + | chr5.1:63131985-63132004 | None:intergenic | 30.0% | |
| GTCAACTCTTGTATATCAAT+TGG | - | chr5.1:63131579-63131598 | MS.gene32488:intron | 30.0% | |
| GTCTCATGTTGAAAACAAAT+TGG | - | chr5.1:63133203-63133222 | MS.gene32488:intron | 30.0% | |
| GTTATGTATAATTGCACAAG+TGG | - | chr5.1:63131684-63131703 | MS.gene32488:CDS | 30.0% | |
| TCAAAAAAGCTAGTCAAAAC+AGG | - | chr5.1:63131857-63131876 | MS.gene32488:intron | 30.0% | |
| TGATTGATATGATCAGAAGA+AGG | + | chr5.1:63129289-63129308 | None:intergenic | 30.0% | |
| TGGAAACATATGTGTAACTA+AGG | + | chr5.1:63130139-63130158 | None:intergenic | 30.0% | |
| TGTTGGAACTTATTGAATGT+TGG | + | chr5.1:63130159-63130178 | None:intergenic | 30.0% | |
| TTCATAAGGTAATTTCTGAG+GGG | + | chr5.1:63132774-63132793 | None:intergenic | 30.0% | |
| TTCATCTTGATGAGATCAAT+AGG | + | chr5.1:63130463-63130482 | None:intergenic | 30.0% | |
| TTGTATAAACTCTACCAAAC+AGG | - | chr5.1:63131809-63131828 | MS.gene32488:intron | 30.0% | |
| TTGTTCATCTTGAAATACGT+AGG | - | chr5.1:63133030-63133049 | MS.gene32488:intron | 30.0% | |
| TTTAGTGCTTGAAATAGAAC+AGG | - | chr5.1:63132836-63132855 | MS.gene32488:intron | 30.0% | |
| ! | ATGAGATGGACAATACTTTT+GGG | + | chr5.1:63131971-63131990 | None:intergenic | 30.0% |
| ! | CATTTTATCCCAATGAATAC+AGG | - | chr5.1:63130949-63130968 | MS.gene32488:intron | 30.0% |
| ! | TTAGTAAGCTTTTCAAAGGT+GGG | - | chr5.1:63129893-63129912 | MS.gene32488:intron | 30.0% |
| !! | ACTCTATATTGTTTCTGTCA+GGG | - | chr5.1:63132422-63132441 | MS.gene32488:intron | 30.0% |
| !! | ATAATTGGTAATGTGTGTTG+TGG | - | chr5.1:63131024-63131043 | MS.gene32488:intron | 30.0% |
| !! | TACTCTATATTGTTTCTGTC+AGG | - | chr5.1:63132421-63132440 | MS.gene32488:intron | 30.0% |
| !! | TGTTGTTTCAGATTCATAGA+AGG | - | chr5.1:63132611-63132630 | MS.gene32488:intron | 30.0% |
| !! | TTCAAAAGTCCAGCTTTATT+CGG | + | chr5.1:63131490-63131509 | None:intergenic | 30.0% |
| !!! | CTAGACAATCTTACCTTTTT+TGG | + | chr5.1:63129586-63129605 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTAGAAACATGG+TGG | - | chr5.1:63130184-63130203 | MS.gene32488:CDS | 30.0% |
| !!! | TAAGTTGTTTTTCGCAAACA+GGG | + | chr5.1:63131626-63131645 | None:intergenic | 30.0% |
| !!! | TTAAGTTGTTTTTCGCAAAC+AGG | + | chr5.1:63131627-63131646 | None:intergenic | 30.0% |
| AAATACTATAGACTCGAGGA+CGG | - | chr5.1:63132161-63132180 | MS.gene32488:intron | 35.0% | |
| AACAAGAGGTTTATGCCTTT+CGG | - | chr5.1:63132463-63132482 | MS.gene32488:intron | 35.0% | |
| AATGATTCTTCTCCAGCTTA+TGG | - | chr5.1:63133252-63133271 | MS.gene32488:intron | 35.0% | |
| ATAGACACATATTGCACAAG+TGG | - | chr5.1:63131662-63131681 | MS.gene32488:intron | 35.0% | |
| ATCAAACCAGCAGCATTTAT+AGG | + | chr5.1:63131922-63131941 | None:intergenic | 35.0% | |
| ATTCATAGAAGGCCAAGAAT+TGG | - | chr5.1:63132622-63132641 | MS.gene32488:intron | 35.0% | |
| ATTGAACAGAAGACTATGTG+GGG | - | chr5.1:63131048-63131067 | MS.gene32488:intron | 35.0% | |
| CATTGAACAGAAGACTATGT+GGG | - | chr5.1:63131047-63131066 | MS.gene32488:intron | 35.0% | |
| CTATAGTATTTCGTATTCCG+AGG | + | chr5.1:63132152-63132171 | None:intergenic | 35.0% | |
| CTGCATGCCATAAAAATATC+CGG | + | chr5.1:63132886-63132905 | None:intergenic | 35.0% | |
| CTGTAGTTGTGAAAGATTAG+AGG | - | chr5.1:63132014-63132033 | MS.gene32488:intron | 35.0% | |
| GAAGATATGAAGAGACCAAA+TGG | - | chr5.1:63130729-63130748 | MS.gene32488:intron | 35.0% | |
| GAAGTTGGAATACCAACATA+AGG | + | chr5.1:63132989-63133008 | None:intergenic | 35.0% | |
| GCACTTAATGATGCTATTGT+TGG | - | chr5.1:63132329-63132348 | MS.gene32488:intron | 35.0% | |
| GTTTGTGATCACTATTCAAG+AGG | - | chr5.1:63129767-63129786 | MS.gene32488:intron | 35.0% | |
| TACGAAATACTATAGACTCG+AGG | - | chr5.1:63132157-63132176 | MS.gene32488:intron | 35.0% | |
| TATGTTAACGCATTCTCTAG+TGG | - | chr5.1:63130304-63130323 | MS.gene32488:CDS | 35.0% | |
| TCTCTGATTGAATGGTATAG+AGG | + | chr5.1:63132245-63132264 | None:intergenic | 35.0% | |
| TGCAATCAGGAGATAATCTA+TGG | - | chr5.1:63131073-63131092 | MS.gene32488:intron | 35.0% | |
| TTATTTGCATTAGCCCATCA+AGG | - | chr5.1:63130834-63130853 | MS.gene32488:intron | 35.0% | |
| TTCTCATGCCTATAAGTCTA+TGG | + | chr5.1:63132651-63132670 | None:intergenic | 35.0% | |
| TTCTCTTTCAACAAGAAGCA+TGG | + | chr5.1:63132309-63132328 | None:intergenic | 35.0% | |
| TTGTTCTATATGGTCTACCA+AGG | - | chr5.1:63132716-63132735 | MS.gene32488:CDS | 35.0% | |
| ! | ATGAAAATTTGGTGGTAAGC+AGG | - | chr5.1:63129820-63129839 | MS.gene32488:intron | 35.0% |
| ! | CATGAGATGGACAATACTTT+TGG | + | chr5.1:63131972-63131991 | None:intergenic | 35.0% |
| ! | CTTAGTAAGCTTTTCAAAGG+TGG | - | chr5.1:63129892-63129911 | MS.gene32488:intron | 35.0% |
| ! | GAAAGTCTGGTTTCATGAAA+TGG | - | chr5.1:63129869-63129888 | MS.gene32488:intron | 35.0% |
| ! | GATCCAAGTTTTCTTTGTCA+GGG | - | chr5.1:63131265-63131284 | MS.gene32488:intron | 35.0% |
| ! | GGAAGCAAACTTCACATTTT+GGG | + | chr5.1:63131332-63131351 | None:intergenic | 35.0% |
| ! | TAAGCACTTTTAAGCCTGTT+TGG | + | chr5.1:63131826-63131845 | None:intergenic | 35.0% |
| ! | TCTCTTTCAACAAGAAGCAT+GGG | + | chr5.1:63132308-63132327 | None:intergenic | 35.0% |
| ! | TGAAAATTTGGTGGTAAGCA+GGG | - | chr5.1:63129821-63129840 | MS.gene32488:intron | 35.0% |
| ! | TGATCCAAGTTTTCTTTGTC+AGG | - | chr5.1:63131264-63131283 | MS.gene32488:intron | 35.0% |
| ! | TGGAAGCAAACTTCACATTT+TGG | + | chr5.1:63131333-63131352 | None:intergenic | 35.0% |
| ! | TGGCTTAGTAAGCTTTTCAA+AGG | - | chr5.1:63129889-63129908 | MS.gene32488:intron | 35.0% |
| !! | GAATCTGCTATAATGGATAC+TGG | - | chr5.1:63132209-63132228 | MS.gene32488:intron | 35.0% |
| !! | GTTTGGTGTCAAACATGTAA+AGG | + | chr5.1:63129733-63129752 | None:intergenic | 35.0% |
| !! | TTGTTTACCAAAGCTCTAGA+TGG | + | chr5.1:63129985-63130004 | None:intergenic | 35.0% |
| !!! | AAAAGTGCTTTTTGCTCACT+TGG | - | chr5.1:63130772-63130791 | MS.gene32488:intron | 35.0% |
| !!! | AATACTTTTGGGACCAAAAG+GGG | + | chr5.1:63131960-63131979 | None:intergenic | 35.0% |
| !!! | ACAATACTTTTGGGACCAAA+AGG | + | chr5.1:63131962-63131981 | None:intergenic | 35.0% |
| !!! | CAATACTTTTGGGACCAAAA+GGG | + | chr5.1:63131961-63131980 | None:intergenic | 35.0% |
| AACTATGGACAGTGGAAACT+TGG | - | chr5.1:63132740-63132759 | MS.gene32488:CDS | 40.0% | |
| AATACTATAGACTCGAGGAC+GGG | - | chr5.1:63132162-63132181 | MS.gene32488:intron | 40.0% | |
| ACATATGTGTAACTAAGGGG+AGG | + | chr5.1:63130134-63130153 | None:intergenic | 40.0% | |
| AGACTTTGCACCTTTCTTTG+AGG | + | chr5.1:63133187-63133206 | None:intergenic | 40.0% | |
| AGCAACAAACTCTCATTGCA+TGG | - | chr5.1:63133134-63133153 | MS.gene32488:intron | 40.0% | |
| ATGAAACCAGACTTTCTCTC+TGG | + | chr5.1:63129865-63129884 | None:intergenic | 40.0% | |
| ATGGTCTACCAAGGTAACTA+TGG | - | chr5.1:63132725-63132744 | MS.gene32488:CDS | 40.0% | |
| ATTGGAGGCCATAGACTTAT+AGG | - | chr5.1:63132640-63132659 | MS.gene32488:intron | 40.0% | |
| CAAATAATAGCATCATGGGC+TGG | + | chr5.1:63129490-63129509 | None:intergenic | 40.0% | |
| CAGAAGGAGAAAGAGGATTT+AGG | - | chr5.1:63130681-63130700 | MS.gene32488:CDS | 40.0% | |
| CAGATTCCTATAAATGCTGC+TGG | - | chr5.1:63131913-63131932 | MS.gene32488:CDS | 40.0% | |
| CATTAGCCCATCAAGGATAT+AGG | - | chr5.1:63130841-63130860 | MS.gene32488:intron | 40.0% | |
| CTCGAACATATTCGTTTGAC+TGG | - | chr5.1:63133330-63133349 | MS.gene32488:CDS | 40.0% | |
| CTTCCCTGACAAAGAAAACT+TGG | + | chr5.1:63131271-63131290 | None:intergenic | 40.0% | |
| GCATTGAACAGAAGACTATG+TGG | - | chr5.1:63131046-63131065 | MS.gene32488:intron | 40.0% | |
| GGCCTAAATGTGAAGATGTT+AGG | + | chr5.1:63131605-63131624 | None:intergenic | 40.0% | |
| GGCCTAACATCTTCACATTT+AGG | - | chr5.1:63131600-63131619 | MS.gene32488:intron | 40.0% | |
| GTCAGGTTCTGTCATATATG+TGG | - | chr5.1:63133091-63133110 | MS.gene32488:intron | 40.0% | |
| GTGATCACAAACCCAATTGA+AGG | + | chr5.1:63129759-63129778 | None:intergenic | 40.0% | |
| GTGCATGGAATCTGCTATAA+TGG | - | chr5.1:63132202-63132221 | MS.gene32488:intron | 40.0% | |
| TAATGGGAGAATGACAAGAG+TGG | + | chr5.1:63131150-63131169 | None:intergenic | 40.0% | |
| TCATCATTATGATCCTGCAG+AGG | - | chr5.1:63129939-63129958 | MS.gene32488:CDS | 40.0% | |
| TCATTGGGATAAAATGGTGC+AGG | + | chr5.1:63130945-63130964 | None:intergenic | 40.0% | |
| TCCTCTTCCATCTTAGTCAA+GGG | + | chr5.1:63130543-63130562 | None:intergenic | 40.0% | |
| TCGGAGACTAGAATGCTAAT+TGG | + | chr5.1:63131471-63131490 | None:intergenic | 40.0% | |
| TGAAACCAGACTTTCTCTCT+GGG | + | chr5.1:63129864-63129883 | None:intergenic | 40.0% | |
| TTATCTTCCTCTTGAAGCCT+CGG | - | chr5.1:63132132-63132151 | MS.gene32488:intron | 40.0% | |
| TTCCATCTTAGTCAAGGGAA+TGG | + | chr5.1:63130538-63130557 | None:intergenic | 40.0% | |
| TTCCATTCCCTTGACTAAGA+TGG | - | chr5.1:63130533-63130552 | MS.gene32488:intron | 40.0% | |
| TTCCTCTTCCATCTTAGTCA+AGG | + | chr5.1:63130544-63130563 | None:intergenic | 40.0% | |
| TTCTAGTCTCCGAATAAAGC+TGG | - | chr5.1:63131478-63131497 | MS.gene32488:CDS | 40.0% | |
| TTGAACAGAAGACTATGTGG+GGG | - | chr5.1:63131049-63131068 | MS.gene32488:intron | 40.0% | |
| ! | AGGCATAAACCTCTTGTTTC+TGG | + | chr5.1:63132461-63132480 | None:intergenic | 40.0% |
| ! | GAAAATTTGGTGGTAAGCAG+GGG | - | chr5.1:63129822-63129841 | MS.gene32488:intron | 40.0% |
| ! | TAAAATGGTGCAGGAGCATA+AGG | + | chr5.1:63130936-63130955 | None:intergenic | 40.0% |
| ! | TGGAAATTGTTTAGGGTGCA+TGG | - | chr5.1:63131093-63131112 | MS.gene32488:intron | 40.0% |
| !! | AACCTCTTGTTTCTGGCAAA+TGG | + | chr5.1:63132454-63132473 | None:intergenic | 40.0% |
| !! | ATGCAATGAGAGTTTGTTGC+TGG | + | chr5.1:63133135-63133154 | None:intergenic | 40.0% |
| !! | CCATGCAATGTCACTTTCTT+CGG | - | chr5.1:63130704-63130723 | MS.gene32488:CDS | 40.0% |
| !! | CGGATATTTTTATGGCATGC+AGG | - | chr5.1:63132884-63132903 | MS.gene32488:intron | 40.0% |
| AAGCTTGTGCTTAGAGTGCA+TGG | - | chr5.1:63132187-63132206 | MS.gene32488:intron | 45.0% | |
| ACACCAAACACGCCTTCAAT+TGG | - | chr5.1:63129744-63129763 | MS.gene32488:intron | 45.0% | |
| ACCAAGGTAACTATGGACAG+TGG | - | chr5.1:63132732-63132751 | MS.gene32488:CDS | 45.0% | |
| ACCATGCATGCATCAACTCA+TGG | + | chr5.1:63132933-63132952 | None:intergenic | 45.0% | |
| AGCCCATCAAGGATATAGGT+GGG | - | chr5.1:63130845-63130864 | MS.gene32488:intron | 45.0% | |
| AGTCTATGGCCTCCAATTCT+TGG | + | chr5.1:63132637-63132656 | None:intergenic | 45.0% | |
| ATGGCATGCAGGTTACTAAC+AGG | - | chr5.1:63132895-63132914 | MS.gene32488:intron | 45.0% | |
| CAATCTCAGTCCTGAAGTAG+AGG | - | chr5.1:63133059-63133078 | MS.gene32488:intron | 45.0% | |
| CACCAAACACGCCTTCAATT+GGG | - | chr5.1:63129745-63129764 | MS.gene32488:intron | 45.0% | |
| CACCATTTGCCAGAAACAAG+AGG | - | chr5.1:63132449-63132468 | MS.gene32488:intron | 45.0% | |
| CATAGAAGGCCAAGAATTGG+AGG | - | chr5.1:63132625-63132644 | MS.gene32488:intron | 45.0% | |
| CATATGCCTTCCTCTACTTC+AGG | + | chr5.1:63133072-63133091 | None:intergenic | 45.0% | |
| CATGCATGGTTACGCCTTAA+AGG | - | chr5.1:63132943-63132962 | MS.gene32488:intron | 45.0% | |
| CATTATGATCCTGCAGAGGA+AGG | - | chr5.1:63129943-63129962 | MS.gene32488:CDS | 45.0% | |
| CCATGCATGCATCAACTCAT+GGG | + | chr5.1:63132932-63132951 | None:intergenic | 45.0% | |
| CCGAAGAAAGTGACATTGCA+TGG | + | chr5.1:63130707-63130726 | None:intergenic | 45.0% | |
| GATTCTTCTCCAGCTTATGG+TGG | - | chr5.1:63133255-63133274 | MS.gene32488:intron | 45.0% | |
| GATTTGTAAGAGGATCACCG+TGG | + | chr5.1:63130271-63130290 | None:intergenic | 45.0% | |
| GCTGCTTCTTCCTCAAAGAA+AGG | - | chr5.1:63133174-63133193 | MS.gene32488:intron | 45.0% | |
| GTCAGTGTCCATGTTTGTGT+CGG | + | chr5.1:63129631-63129650 | None:intergenic | 45.0% | |
| TAGAGCTCAGAAGGAGAAAG+AGG | - | chr5.1:63130674-63130693 | MS.gene32488:CDS | 45.0% | |
| TAGCCCATCAAGGATATAGG+TGG | - | chr5.1:63130844-63130863 | MS.gene32488:intron | 45.0% | |
| TCCACTGTCCATAGTTACCT+TGG | + | chr5.1:63132736-63132755 | None:intergenic | 45.0% | |
| TCCCTTGACTAAGATGGAAG+AGG | - | chr5.1:63130539-63130558 | MS.gene32488:intron | 45.0% | |
| TTCAAAGGTGGGTCCAATAG+AGG | - | chr5.1:63129904-63129923 | MS.gene32488:intron | 45.0% | |
| ! | AACCCAATTGAAGGCGTGTT+TGG | + | chr5.1:63129750-63129769 | None:intergenic | 45.0% |
| ! | AGTAGAGGAAGGCATATGTC+AGG | - | chr5.1:63133074-63133093 | MS.gene32488:intron | 45.0% |
| ! | AGTATAGATGCCACCCCTTT+TGG | - | chr5.1:63131944-63131963 | MS.gene32488:CDS | 45.0% |
| ! | TCACAGTTTGCTCTTCCGAA+AGG | + | chr5.1:63132481-63132500 | None:intergenic | 45.0% |
| !! | ATGTAGCACCGACACAAACA+TGG | - | chr5.1:63129620-63129639 | MS.gene32488:intron | 45.0% |
| AAGGTGGGTCCAATAGAGGA+AGG | - | chr5.1:63129908-63129927 | MS.gene32488:intron | 50.0% | |
| ACGACCACTCCTTCCTCTAT+TGG | + | chr5.1:63129920-63129939 | None:intergenic | 50.0% | |
| CATCAAGGATATAGGTGGGG+GGG | - | chr5.1:63130849-63130868 | MS.gene32488:intron | 50.0% | |
| CCATCAAGGATATAGGTGGG+GGG | - | chr5.1:63130848-63130867 | MS.gene32488:intron | 50.0% | |
| CCCATCAAGGATATAGGTGG+GGG | - | chr5.1:63130847-63130866 | MS.gene32488:intron | 50.0% | |
| CCCCCACCTATATCCTTGAT+GGG | + | chr5.1:63130850-63130869 | None:intergenic | 50.0% | |
| CTCAGTCCTGAAGTAGAGGA+AGG | - | chr5.1:63133063-63133082 | MS.gene32488:intron | 50.0% | |
| GCCCATCAAGGATATAGGTG+GGG | - | chr5.1:63130846-63130865 | MS.gene32488:intron | 50.0% | |
| TCACACCCAGAGAGAAAGTC+TGG | - | chr5.1:63129856-63129875 | MS.gene32488:intron | 50.0% | |
| TCGTATTCCGAGGCTTCAAG+AGG | + | chr5.1:63132142-63132161 | None:intergenic | 50.0% | |
| TGATCGTGCTAGAGCTCAGA+AGG | - | chr5.1:63130665-63130684 | MS.gene32488:CDS | 50.0% | |
| TGTCGTGAACATTAGCGCAG+TGG | + | chr5.1:63130373-63130392 | None:intergenic | 50.0% | |
| ! | AATGGTGCAGGAGCATAAGG+AGG | + | chr5.1:63130933-63130952 | None:intergenic | 50.0% |
| ! | ATGGTGCAGGAGCATAAGGA+GGG | + | chr5.1:63130932-63130951 | None:intergenic | 50.0% |
| !! | CCCATGAGTTGATGCATGCA+TGG | - | chr5.1:63132929-63132948 | MS.gene32488:intron | 50.0% |
| !!! | ACTTTTGGGACCAAAAGGGG+TGG | + | chr5.1:63131957-63131976 | None:intergenic | 50.0% |
| AACTACCTCGCGCTCGGTAA+TGG | + | chr5.1:63131167-63131186 | None:intergenic | 55.0% | |
| ACTACCTCGCGCTCGGTAAT+GGG | + | chr5.1:63131166-63131185 | None:intergenic | 55.0% | |
| ACTATGTGGGGGCTGCAATC+AGG | - | chr5.1:63131060-63131079 | MS.gene32488:intron | 55.0% | |
| CAAGACATGCCTTCCTCTGC+AGG | + | chr5.1:63129955-63129974 | None:intergenic | 55.0% | |
| CCCCCCACCTATATCCTTGA+TGG | + | chr5.1:63130851-63130870 | None:intergenic | 55.0% | |
| GGATCAAACTACCTCGCGCT+CGG | + | chr5.1:63131173-63131192 | None:intergenic | 55.0% | |
| GGGTCCAATAGAGGAAGGAG+TGG | - | chr5.1:63129913-63129932 | MS.gene32488:CDS | 55.0% | |
| TGAGGAAGAAGCAGCAGCTG+TGG | + | chr5.1:63133169-63133188 | None:intergenic | 55.0% | |
| ! | CTGCAGAGGAAGGCATGTCT+TGG | - | chr5.1:63129953-63129972 | MS.gene32488:CDS | 55.0% |
| ! | GAGTGGCATCGAAAGCAGTC+TGG | + | chr5.1:63131133-63131152 | None:intergenic | 55.0% |
| ! | GCGTGCTCCATCTAGAGCTT+TGG | - | chr5.1:63129975-63129994 | MS.gene32488:CDS | 55.0% |
| TTCTCCCATTACCGAGCGCG+AGG | - | chr5.1:63131159-63131178 | MS.gene32488:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 63129280 | 63133368 | 63129280 | ID=MS.gene32488 |
| chr5.1 | mRNA | 63129280 | 63133368 | 63129280 | ID=MS.gene32488.t1;Parent=MS.gene32488 |
| chr5.1 | exon | 63133317 | 63133368 | 63133317 | ID=MS.gene32488.t1.exon1;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63133317 | 63133368 | 63133317 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63132652 | 63132806 | 63132652 | ID=MS.gene32488.t1.exon2;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63132652 | 63132806 | 63132652 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63131898 | 63131985 | 63131898 | ID=MS.gene32488.t1.exon3;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63131898 | 63131985 | 63131898 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63131678 | 63131801 | 63131678 | ID=MS.gene32488.t1.exon4;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63131678 | 63131801 | 63131678 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63131468 | 63131591 | 63131468 | ID=MS.gene32488.t1.exon5;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63131468 | 63131591 | 63131468 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63131292 | 63131375 | 63131292 | ID=MS.gene32488.t1.exon6;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63131292 | 63131375 | 63131292 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63130613 | 63130732 | 63130613 | ID=MS.gene32488.t1.exon7;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63130613 | 63130732 | 63130613 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63130287 | 63130499 | 63130287 | ID=MS.gene32488.t1.exon8;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63130287 | 63130499 | 63130287 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63130143 | 63130205 | 63130143 | ID=MS.gene32488.t1.exon9;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63130143 | 63130205 | 63130143 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63129911 | 63130026 | 63129911 | ID=MS.gene32488.t1.exon10;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63129911 | 63130026 | 63129911 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63129684 | 63129742 | 63129684 | ID=MS.gene32488.t1.exon11;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63129684 | 63129742 | 63129684 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| chr5.1 | exon | 63129280 | 63129596 | 63129280 | ID=MS.gene32488.t1.exon12;Parent=MS.gene32488.t1 |
| chr5.1 | CDS | 63129280 | 63129596 | 63129280 | ID=cds.MS.gene32488.t1;Parent=MS.gene32488.t1 |
| Gene Sequence |
| Protein sequence |
