Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32585.t1 | XP_003603464.1 | 96.3 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 4.40E-202 | 713.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32585.t1 | Q84MB2 | 38.4 | 346 | 127 | 12 | 42 | 378 | 91 | 359 | 5.1e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32585.t1 | G7JBP9 | 96.3 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 3.2e-202 | 713.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene32585.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32585.t1 | MTR_3g107950 | 96.345 | 383 | 14 | 0 | 1 | 383 | 34 | 416 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32585.t1 | AT4G32570 | 37.371 | 388 | 156 | 13 | 1 | 378 | 49 | 359 | 2.24e-46 | 162 |
| MS.gene32585.t1 | AT4G32570 | 38.062 | 289 | 103 | 7 | 1 | 285 | 49 | 265 | 9.61e-45 | 158 |
Find 117 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCTGATTCCTCATTTA+TGG | 0.101310 | 3.1:-85431649 | MS.gene32585:CDS |
| TGCTTGAACCGTCGGATTTC+TGG | 0.144469 | 3.1:+85428511 | None:intergenic |
| CTAAGATTGATGCGAATAAA+TGG | 0.197424 | 3.1:-85431326 | MS.gene32585:CDS |
| ACCAGCTTTGCAGTAGATTT+TGG | 0.210010 | 3.1:+85429185 | None:intergenic |
| AGCAGTAGCAGCTGTGTTTA+TGG | 0.223812 | 3.1:+85431113 | None:intergenic |
| ATTATATTAGTTAGAGGTTT+TGG | 0.247280 | 3.1:+85431048 | None:intergenic |
| AATTCTGATTCCTCATTTAT+GGG | 0.297898 | 3.1:-85431648 | MS.gene32585:CDS |
| GTTTATGGAACTTAAAATTC+CGG | 0.317860 | 3.1:+85431128 | None:intergenic |
| GATGTTATAATGGCTTTAGC+TGG | 0.336522 | 3.1:-85429242 | MS.gene32585:CDS |
| CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | 3.1:-85429146 | MS.gene32585:CDS |
| CCCACCTCCGAAACCGCTTC+TGG | 0.346559 | 3.1:-85432377 | MS.gene32585:intron |
| CTCGAGGGAGTTCCGTTCTA+TGG | 0.355043 | 3.1:-85431732 | MS.gene32585:CDS |
| GGAGAAAGGGCCACGAGCAC+CGG | 0.363590 | 3.1:+85432400 | None:intergenic |
| AAGCTTAGGGATACCATTTC+AGG | 0.375711 | 3.1:-85431210 | MS.gene32585:CDS |
| GATTCTATTATATTAGTTAG+AGG | 0.379814 | 3.1:+85431042 | None:intergenic |
| GACCATTTGAAAGGCATCTC+TGG | 0.380703 | 3.1:+85431620 | None:intergenic |
| TCTCTCCTCCAGACGCATTT+CGG | 0.381595 | 3.1:+85431442 | None:intergenic |
| TTCCACCGACGTTAGGTTAC+CGG | 0.385652 | 3.1:-85432447 | MS.gene32585:CDS |
| GTACTTACCAGAAGCGGTTT+CGG | 0.387222 | 3.1:+85432370 | None:intergenic |
| TTTATGGAACTTAAAATTCC+GGG | 0.389295 | 3.1:+85431129 | None:intergenic |
| ACCAGAAGCGGTTTCGGAGG+TGG | 0.406796 | 3.1:+85432376 | None:intergenic |
| ACCAAAATCTACTGCAAAGC+TGG | 0.409213 | 3.1:-85429186 | MS.gene32585:CDS |
| CGCATCAATCTTAGTGTTGG+TGG | 0.409917 | 3.1:+85431335 | None:intergenic |
| CGCGGAGGATGCTGCATGGA+AGG | 0.412485 | 3.1:+85431276 | None:intergenic |
| CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | 3.1:-85429089 | MS.gene32585:CDS |
| AACTAGCTTCAAACAAGCTT+AGG | 0.417740 | 3.1:-85431224 | MS.gene32585:CDS |
| GCCACGAGCACCGGCGGAGG+AGG | 0.420220 | 3.1:+85432409 | None:intergenic |
| TATGCAGGCTGATGTTATAA+TGG | 0.438508 | 3.1:-85429252 | MS.gene32585:intron |
| TGATGATGTCCACCAACATA+AGG | 0.439728 | 3.1:-85430845 | MS.gene32585:intron |
| CAGGTCCTCCGAAATGCGTC+TGG | 0.445569 | 3.1:-85431450 | MS.gene32585:CDS |
| GATAAATGAAGGGCCTGAAA+TGG | 0.460185 | 3.1:+85431197 | None:intergenic |
| TAAGCTTGTTTGAAGCTAGT+TGG | 0.461069 | 3.1:+85431226 | None:intergenic |
| ATAGTCATCTGGCGGCTGGC+AGG | 0.466446 | 3.1:+85430895 | None:intergenic |
| GCATTCCCACAAGAGCTTCA+TGG | 0.467087 | 3.1:-85429107 | MS.gene32585:CDS |
| GAAAGGGCCACGAGCACCGG+CGG | 0.469354 | 3.1:+85432403 | None:intergenic |
| CATTCCCACAAGAGCTTCAT+GGG | 0.469855 | 3.1:-85429106 | MS.gene32585:CDS |
| CTCCAGAGATGCCTTTCAAA+TGG | 0.470651 | 3.1:-85431622 | MS.gene32585:CDS |
| TAAGATTGATGCGAATAAAT+GGG | 0.473687 | 3.1:-85431325 | MS.gene32585:CDS |
| GAAGCTAGTTGGTGTGCAAA+AGG | 0.473984 | 3.1:+85431237 | None:intergenic |
| TCAAAACTCGCATTTGATGA+AGG | 0.474807 | 3.1:-85431586 | MS.gene32585:intron |
| CCAGAAGCGGTTTCGGAGGT+GGG | 0.475857 | 3.1:+85432377 | None:intergenic |
| GGAGTAGATACACGATCAAC+AGG | 0.476638 | 3.1:+85429044 | None:intergenic |
| AGGGCCACGAGCACCGGCGG+AGG | 0.478100 | 3.1:+85432406 | None:intergenic |
| CTGGGTCAAATGGTGGATCT+TGG | 0.478685 | 3.1:-85429223 | MS.gene32585:CDS |
| CTGATACTTCCACCGACGTT+AGG | 0.478726 | 3.1:-85432454 | MS.gene32585:CDS |
| CATCAATTTGGTAGAAAAGC+AGG | 0.480591 | 3.1:-85431766 | MS.gene32585:intron |
| GCCTCCTCCGCCGGTGCTCG+TGG | 0.487582 | 3.1:-85432410 | MS.gene32585:CDS |
| ATGGCTTTAGCTGGGTCAAA+TGG | 0.490826 | 3.1:-85429233 | MS.gene32585:CDS |
| TCAGCATCAGCCTCCTCCGC+CGG | 0.490900 | 3.1:-85432419 | MS.gene32585:CDS |
| GCTGATGAAGGATCTAGAAC+TGG | 0.491143 | 3.1:-85431162 | MS.gene32585:CDS |
| AACTTCCCATGAAGCTCTTG+TGG | 0.491396 | 3.1:+85429101 | None:intergenic |
| CTCCATAAAAGATAGTCATC+TGG | 0.496051 | 3.1:+85430884 | None:intergenic |
| ATGCAGCATCCTCCGCGTGC+AGG | 0.496967 | 3.1:-85431270 | MS.gene32585:CDS |
| GAGATAAGTAACAGACTAGT+GGG | 0.497646 | 3.1:-85431684 | MS.gene32585:CDS |
| ACTTCCCATGAAGCTCTTGT+GGG | 0.498210 | 3.1:+85429102 | None:intergenic |
| ACTAGCTTCAAACAAGCTTA+GGG | 0.503406 | 3.1:-85431223 | MS.gene32585:CDS |
| GCAGGCTGAGAGATAAATGA+AGG | 0.506389 | 3.1:+85431186 | None:intergenic |
| AATGATGACGAAGTGTTACT+TGG | 0.508592 | 3.1:-85431405 | MS.gene32585:CDS |
| GGATCTGCTGCTTGAACCGT+CGG | 0.509893 | 3.1:+85428503 | None:intergenic |
| AGAAGCGGTTTCGGAGGTGG+GGG | 0.510027 | 3.1:+85432379 | None:intergenic |
| GGATCTAGAACTGGAATCAA+AGG | 0.514477 | 3.1:-85431153 | MS.gene32585:CDS |
| GAGGCTGATGCTGATGCCTC+CGG | 0.517085 | 3.1:+85432428 | None:intergenic |
| TCTCAGCCTGCCGCTGATGA+AGG | 0.519106 | 3.1:-85431174 | MS.gene32585:CDS |
| ATTCGCATCAATCTTAGTGT+TGG | 0.520039 | 3.1:+85431332 | None:intergenic |
| CTAGATCCTTCATCAGCGGC+AGG | 0.525101 | 3.1:+85431168 | None:intergenic |
| CGGTCTATTCTCATGAATGC+TGG | 0.526152 | 3.1:-85431300 | MS.gene32585:CDS |
| AGTAACACTTCGTCATCATT+AGG | 0.535648 | 3.1:+85431408 | None:intergenic |
| GGCAGTTCTAGCCGTGCCGT+TGG | 0.541164 | 3.1:-85429068 | MS.gene32585:CDS |
| AATATCTGAGAACTAGAAGA+TGG | 0.544323 | 3.1:+85431366 | None:intergenic |
| AAAGATAGTCATCTGGCGGC+TGG | 0.544851 | 3.1:+85430891 | None:intergenic |
| CAGAAGCGGTTTCGGAGGTG+GGG | 0.547490 | 3.1:+85432378 | None:intergenic |
| ATGTTATAATGGCTTTAGCT+GGG | 0.549931 | 3.1:-85429241 | MS.gene32585:CDS |
| AAGGTTGGACCTTATGTTGG+TGG | 0.550076 | 3.1:+85430836 | None:intergenic |
| ATTTCATCTGCAGTGCTGCT+CGG | 0.551203 | 3.1:-85431081 | MS.gene32585:CDS |
| GCGGAGGATGCTGCATGGAA+GGG | 0.553889 | 3.1:+85431277 | None:intergenic |
| GCATCAATCTTAGTGTTGGT+GGG | 0.554769 | 3.1:+85431336 | None:intergenic |
| TACAAGGTTGGACCTTATGT+TGG | 0.561474 | 3.1:+85430833 | None:intergenic |
| AGAACTGGAATCAAAGGCCC+CGG | 0.567203 | 3.1:-85431147 | MS.gene32585:CDS |
| CCGGTTGTAGGGGCGCATCA+AGG | 0.580384 | 3.1:-85428554 | MS.gene32585:intron |
| TCACTTCTTGGGCCATAGAA+CGG | 0.581400 | 3.1:+85431720 | None:intergenic |
| TCTGGAGGAACCCATAAATG+AGG | 0.581916 | 3.1:+85431638 | None:intergenic |
| AACGATAGTAACTTGCATAG+TGG | 0.584799 | 3.1:-85429161 | MS.gene32585:CDS |
| TGCACGCGGAGGATGCTGCA+TGG | 0.586678 | 3.1:+85431272 | None:intergenic |
| GCTTTAGCTGGGTCAAATGG+TGG | 0.588269 | 3.1:-85429230 | MS.gene32585:CDS |
| GATCGTGTATCTACTCCAGC+CGG | 0.597972 | 3.1:-85429038 | MS.gene32585:intron |
| GGAATCAGGGACCATTTGAA+AGG | 0.601761 | 3.1:+85431611 | None:intergenic |
| TACACGATCAACAGGTCCAA+CGG | 0.603243 | 3.1:+85429052 | None:intergenic |
| GATCAACAGGTCCAACGGCA+CGG | 0.605689 | 3.1:+85429057 | None:intergenic |
| CTCCTCCAGACGCATTTCGG+AGG | 0.605747 | 3.1:+85431445 | None:intergenic |
| AACGTCGGTGGAAGTATCAG+TGG | 0.609086 | 3.1:+85432457 | None:intergenic |
| GTCCTCCGAAATGCGTCTGG+AGG | 0.623376 | 3.1:-85431447 | MS.gene32585:CDS |
| GTATTGAGCAGCAGTCAACA+TGG | 0.625398 | 3.1:-85430925 | MS.gene32585:intron |
| TGAGATAAGTAACAGACTAG+TGG | 0.631355 | 3.1:-85431685 | MS.gene32585:CDS |
| TTAGGAGTACTTACCAGAAG+CGG | 0.633996 | 3.1:+85432364 | None:intergenic |
| CTTACCAGAAGCGGTTTCGG+AGG | 0.640461 | 3.1:+85432373 | None:intergenic |
| TTGATGCGAATAAATGGGAA+CGG | 0.646108 | 3.1:-85431320 | MS.gene32585:CDS |
| CATTTGAAAGGCATCTCTGG+AGG | 0.646720 | 3.1:+85431623 | None:intergenic |
| CACCGACGTTAGGTTACCGG+AGG | 0.647418 | 3.1:-85432444 | MS.gene32585:CDS |
| CTGGAGGAGAGAGATCGAGA+AGG | 0.648772 | 3.1:-85431431 | MS.gene32585:CDS |
| CAGGTATCGAATCATCTCGA+GGG | 0.650968 | 3.1:-85431747 | MS.gene32585:CDS |
| AGTTCTAGATCCTTCATCAG+CGG | 0.651396 | 3.1:+85431164 | None:intergenic |
| TCAATCTTAGTGTTGGTGGG+TGG | 0.654121 | 3.1:+85431339 | None:intergenic |
| CTCCGGTAACCTAACGTCGG+TGG | 0.654776 | 3.1:+85432445 | None:intergenic |
| ACGTCGGTGGAAGTATCAGT+GGG | 0.655076 | 3.1:+85432458 | None:intergenic |
| GCAGGTATCGAATCATCTCG+AGG | 0.661921 | 3.1:-85431748 | MS.gene32585:CDS |
| TTATGGAACTTAAAATTCCG+GGG | 0.662736 | 3.1:+85431130 | None:intergenic |
| TCATCTGCAGTGCTGCTCGG+TGG | 0.664281 | 3.1:-85431078 | MS.gene32585:CDS |
| CATAAAAGATAGTCATCTGG+CGG | 0.666315 | 3.1:+85430887 | None:intergenic |
| GGAGTCAACTGTCCTGCACG+CGG | 0.676528 | 3.1:+85431258 | None:intergenic |
| GTCAACTGTCCTGCACGCGG+AGG | 0.677451 | 3.1:+85431261 | None:intergenic |
| CAGGCTGAGAGATAAATGAA+GGG | 0.677535 | 3.1:+85431187 | None:intergenic |
| TAAAGATACCAGAAATCCGA+CGG | 0.679270 | 3.1:-85428519 | MS.gene32585:CDS |
| AACAGGGTTAGTGAGTAATG+TGG | 0.689431 | 3.1:-85429129 | MS.gene32585:CDS |
| TGCCTCCGGTAACCTAACGT+CGG | 0.705158 | 3.1:+85432442 | None:intergenic |
| ATAAGATAGATTTACCTTGG+GGG | 0.712059 | 3.1:+85431012 | None:intergenic |
| ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | 3.1:-85429145 | MS.gene32585:CDS |
| AGATAAGTAACAGACTAGTG+GGG | 0.741446 | 3.1:-85431683 | MS.gene32585:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAAATATATTAGAATAT+TGG | - | chr3.1:85432203-85432222 | MS.gene32585:intron | 10.0% |
| !!! | AAATGATTTTAATGAAAAAT+TGG | + | chr3.1:85431470-85431489 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTAAAATCATTT+AGG | - | chr3.1:85431470-85431489 | MS.gene32585:intron | 10.0% |
| !!! | TATAATGATATGAATTTTTA+GGG | - | chr3.1:85429005-85429024 | MS.gene32585:intron | 10.0% |
| !!! | TTTTTCATTAAAATCATTTA+GGG | - | chr3.1:85431471-85431490 | MS.gene32585:intron | 10.0% |
| !! | AGAAAATAATATAAAAGCAA+AGG | + | chr3.1:85429443-85429462 | None:intergenic | 15.0% |
| !! | TCTAATATATTTAGAAAGAA+AGG | + | chr3.1:85432199-85432218 | None:intergenic | 15.0% |
| !! | TGAATAAAAAAATGAAACAT+GGG | + | chr3.1:85428633-85428652 | None:intergenic | 15.0% |
| !!! | GTATAATGATATGAATTTTT+AGG | - | chr3.1:85429004-85429023 | MS.gene32585:intron | 15.0% |
| !!! | GTTTTTATGTTTTCTTTAAA+TGG | - | chr3.1:85429131-85429150 | MS.gene32585:CDS | 15.0% |
| !!! | GTTTTTGTTTCAATAATTAT+AGG | - | chr3.1:85428753-85428772 | MS.gene32585:intron | 15.0% |
| !!! | TTTAATGAAAAATTGGTTTT+TGG | + | chr3.1:85431463-85431482 | None:intergenic | 15.0% |
| !! | AAAGATCAAAGAAAATAAAC+AGG | + | chr3.1:85431518-85431537 | None:intergenic | 20.0% |
| !! | AAATTGTTCCTTAAAAAACT+CGG | - | chr3.1:85430212-85430231 | MS.gene32585:intron | 20.0% |
| !! | AATCAAAACTTTAGTTGTTT+AGG | + | chr3.1:85428596-85428615 | None:intergenic | 20.0% |
| !! | AGTGAAAATAAATAGAAACA+AGG | + | chr3.1:85429973-85429992 | None:intergenic | 20.0% |
| !! | ATACATGTTAAAAAACCATT+CGG | + | chr3.1:85431085-85431104 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATTTACCTT+GGG | + | chr3.1:85429932-85429951 | None:intergenic | 20.0% |
| !! | CTGAATAAAAAAATGAAACA+TGG | + | chr3.1:85428634-85428653 | None:intergenic | 20.0% |
| !! | GAATAAAAAAATGAAACATG+GGG | + | chr3.1:85428632-85428651 | None:intergenic | 20.0% |
| !! | GATTCTATTATATTAGTTAG+AGG | + | chr3.1:85429900-85429919 | None:intergenic | 20.0% |
| !! | TAGACTTGATGTATAAATAT+TGG | - | chr3.1:85431315-85431334 | MS.gene32585:CDS | 20.0% |
| !! | TATATAAGATAGATTTACCT+TGG | + | chr3.1:85429933-85429952 | None:intergenic | 20.0% |
| !! | TATATTCAATAGCCAAAAAA+AGG | - | chr3.1:85429411-85429430 | MS.gene32585:intron | 20.0% |
| !!! | AAGTTTTTTGTTCAAAACAA+TGG | + | chr3.1:85428951-85428970 | None:intergenic | 20.0% |
| !!! | ATTATATTAGTTAGAGGTTT+TGG | + | chr3.1:85429894-85429913 | None:intergenic | 20.0% |
| !!! | CAACTAAAGTTTTGATTTTT+AGG | - | chr3.1:85428599-85428618 | MS.gene32585:intron | 20.0% |
| !!! | TCTTTTCTATCAGATATTAT+TGG | + | chr3.1:85430499-85430518 | None:intergenic | 20.0% |
| !!! | TTTTAACAGTTACTTATCTA+AGG | - | chr3.1:85430603-85430622 | MS.gene32585:intron | 20.0% |
| !!! | TTTTTGGCTATTGAATATAT+TGG | + | chr3.1:85429410-85429429 | None:intergenic | 20.0% |
| ! | AAATACTTATACAAGTGACT+AGG | + | chr3.1:85430892-85430911 | None:intergenic | 25.0% |
| ! | AATAAGCATTAAAAACCGAA+TGG | - | chr3.1:85431067-85431086 | MS.gene32585:CDS | 25.0% |
| ! | AATAATGCCTGAAATTAGTT+TGG | - | chr3.1:85430166-85430185 | MS.gene32585:intron | 25.0% |
| ! | AATAGAATTGCTTAAGCTTT+GGG | - | chr3.1:85430535-85430554 | MS.gene32585:intron | 25.0% |
| ! | AATATTCTGATTTCTAAGTG+GGG | - | chr3.1:85431128-85431147 | MS.gene32585:CDS | 25.0% |
| ! | AATCAAGAAAATATTCGAGT+TGG | + | chr3.1:85432259-85432278 | None:intergenic | 25.0% |
| ! | AATTCCCCTTAATATGATAT+CGG | - | chr3.1:85432050-85432069 | MS.gene32585:intron | 25.0% |
| ! | AATTCTGATTCCTCATTTAT+GGG | - | chr3.1:85429291-85429310 | MS.gene32585:intron | 25.0% |
| ! | AGATAAGTAACTGTTAAAAC+CGG | + | chr3.1:85430602-85430621 | None:intergenic | 25.0% |
| ! | AGCTTAAGCAATTCTATTAT+TGG | + | chr3.1:85430533-85430552 | None:intergenic | 25.0% |
| ! | ATCATATTTCAGCCAAAATA+CGG | - | chr3.1:85430300-85430319 | MS.gene32585:intron | 25.0% |
| ! | GAATATTCTGATTTCTAAGT+GGG | - | chr3.1:85431127-85431146 | MS.gene32585:CDS | 25.0% |
| ! | GTTTATGGAACTTAAAATTC+CGG | + | chr3.1:85429814-85429833 | None:intergenic | 25.0% |
| ! | TAAGATTGATGCGAATAAAT+GGG | - | chr3.1:85429614-85429633 | MS.gene32585:intron | 25.0% |
| ! | TAATAGAATTGCTTAAGCTT+TGG | - | chr3.1:85430534-85430553 | MS.gene32585:intron | 25.0% |
| ! | TAATTCTGATTCCTCATTTA+TGG | - | chr3.1:85429290-85429309 | MS.gene32585:intron | 25.0% |
| ! | TAGTCACTTGTATAAGTATT+TGG | - | chr3.1:85430891-85430910 | MS.gene32585:CDS | 25.0% |
| ! | TATAAGATAGATTTACCTTG+GGG | + | chr3.1:85429931-85429950 | None:intergenic | 25.0% |
| ! | TATGACAAGTTAAGAATACA+AGG | + | chr3.1:85430125-85430144 | None:intergenic | 25.0% |
| ! | TATTGCTTGATATTGCTTAT+TGG | - | chr3.1:85431250-85431269 | MS.gene32585:CDS | 25.0% |
| ! | TCTTAGTTTCTTACTTATTC+TGG | - | chr3.1:85429070-85429089 | MS.gene32585:CDS | 25.0% |
| ! | TTGATTGATTGCTAAATATC+CGG | - | chr3.1:85432366-85432385 | MS.gene32585:intron | 25.0% |
| ! | TTTATGGAACTTAAAATTCC+GGG | + | chr3.1:85429813-85429832 | None:intergenic | 25.0% |
| !! | AATTTATGGTCATGATTTTC+TGG | - | chr3.1:85428825-85428844 | MS.gene32585:intron | 25.0% |
| !! | AGAAGACAAGAATTTTCATA+TGG | + | chr3.1:85432298-85432317 | None:intergenic | 25.0% |
| !! | CTGACTCTAAATTATTTTCA+TGG | + | chr3.1:85428897-85428916 | None:intergenic | 25.0% |
| !! | TTGATTGAGTTTATGCATTT+TGG | - | chr3.1:85429992-85430011 | MS.gene32585:intron | 25.0% |
| !! | TTTTTAATCAAAATCCAGTG+AGG | - | chr3.1:85431364-85431383 | MS.gene32585:CDS | 25.0% |
| !!! | TTCCATTTTTTTCTCTTAGT+GGG | - | chr3.1:85428683-85428702 | MS.gene32585:intron | 25.0% |
| !!! | TTTCCATTTTTTTCTCTTAG+TGG | - | chr3.1:85428682-85428701 | MS.gene32585:intron | 25.0% |
| AACCAAAGACACAAAATTGA+GGG | + | chr3.1:85428722-85428741 | None:intergenic | 30.0% | |
| AAGAAAAGGATGACACAAAA+AGG | + | chr3.1:85432165-85432184 | None:intergenic | 30.0% | |
| AATATCTGAGAACTAGAAGA+TGG | + | chr3.1:85429576-85429595 | None:intergenic | 30.0% | |
| ACAAGTTAAGAATACAAGGT+TGG | + | chr3.1:85430121-85430140 | None:intergenic | 30.0% | |
| AGTTGTCCGATATCATATTA+AGG | + | chr3.1:85432059-85432078 | None:intergenic | 30.0% | |
| ATAAGATAGATTTACCTTGG+GGG | + | chr3.1:85429930-85429949 | None:intergenic | 30.0% | |
| ATTGATCAATCAATGCCTTT+GGG | - | chr3.1:85431432-85431451 | MS.gene32585:CDS | 30.0% | |
| CATTGCATTTAAGCTACATT+TGG | - | chr3.1:85430839-85430858 | MS.gene32585:intron | 30.0% | |
| CTAAGATTGATGCGAATAAA+TGG | - | chr3.1:85429613-85429632 | MS.gene32585:intron | 30.0% | |
| CTATCATGAGGATTACTATT+AGG | + | chr3.1:85430971-85430990 | None:intergenic | 30.0% | |
| GACGTAAAAATTAACTGACT+TGG | - | chr3.1:85430678-85430697 | MS.gene32585:intron | 30.0% | |
| GCATACTACATAGTTTGATT+TGG | - | chr3.1:85431934-85431953 | MS.gene32585:intron | 30.0% | |
| GGAATATTCTGATTTCTAAG+TGG | - | chr3.1:85431126-85431145 | MS.gene32585:CDS | 30.0% | |
| GTATTATCATACCTCCAAAT+TGG | - | chr3.1:85431973-85431992 | MS.gene32585:intron | 30.0% | |
| GTTGTCCGATATCATATTAA+GGG | + | chr3.1:85432058-85432077 | None:intergenic | 30.0% | |
| TAGTCACTTGTATAAGTACT+TGG | - | chr3.1:85430917-85430936 | MS.gene32585:CDS | 30.0% | |
| TCTTTCAATCACTACCAATT+TGG | + | chr3.1:85431990-85432009 | None:intergenic | 30.0% | |
| TTATGGAACTTAAAATTCCG+GGG | + | chr3.1:85429812-85429831 | None:intergenic | 30.0% | |
| TTCACAGTTGAAGTGATTAA+TGG | + | chr3.1:85431171-85431190 | None:intergenic | 30.0% | |
| TTGGCTATTGAATATATTGG+AGG | + | chr3.1:85429407-85429426 | None:intergenic | 30.0% | |
| TTGTCCGATATCATATTAAG+GGG | + | chr3.1:85432057-85432076 | None:intergenic | 30.0% | |
| ! | AGACACATATAGTTTGTCTT+GGG | - | chr3.1:85431571-85431590 | MS.gene32585:intron | 30.0% |
| ! | ATAGTGGAGAAAATGAAACA+GGG | - | chr3.1:85431794-85431813 | MS.gene32585:intron | 30.0% |
| ! | ATTGCAGTTTCTACATCTTT+TGG | - | chr3.1:85430441-85430460 | MS.gene32585:intron | 30.0% |
| ! | CAAATCCATCAAGAATTTTG+AGG | - | chr3.1:85430653-85430672 | MS.gene32585:intron | 30.0% |
| ! | CATCCTTTTCTTTACTTTAC+TGG | - | chr3.1:85432173-85432192 | MS.gene32585:intron | 30.0% |
| ! | CTTTTCTACCAAATTGATGA+GGG | + | chr3.1:85429172-85429191 | None:intergenic | 30.0% |
| ! | GGATTGTTGAAAGCTAATTT+TGG | + | chr3.1:85432096-85432115 | None:intergenic | 30.0% |
| ! | TAAGTATCAACACCGTATTT+TGG | + | chr3.1:85430315-85430334 | None:intergenic | 30.0% |
| ! | TATCTGTTTACTGCATTTTG+TGG | - | chr3.1:85430143-85430162 | MS.gene32585:intron | 30.0% |
| ! | TATTTTCACTACTGTAAGAG+TGG | + | chr3.1:85431051-85431070 | None:intergenic | 30.0% |
| ! | TGGAAAGTATAGAACTTTAG+TGG | + | chr3.1:85428668-85428687 | None:intergenic | 30.0% |
| ! | TTAGGGCAAACTCATTTTAA+AGG | - | chr3.1:85431488-85431507 | MS.gene32585:intron | 30.0% |
| ! | TTTTCTACCAAATTGATGAG+GGG | + | chr3.1:85429171-85429190 | None:intergenic | 30.0% |
| !! | AGAAAATATTCGAGTTGGTA+CGG | + | chr3.1:85432254-85432273 | None:intergenic | 30.0% |
| !! | ATGTTATAATGGCTTTAGCT+GGG | - | chr3.1:85431698-85431717 | MS.gene32585:CDS | 30.0% |
| !! | TTTCTGTCTAGTTCTTGTAA+TGG | - | chr3.1:85431535-85431554 | MS.gene32585:intron | 30.0% |
| !!! | CAAAGGCATTTTCCTTTTTT+TGG | + | chr3.1:85429426-85429445 | None:intergenic | 30.0% |
| !!! | CATTATTTTTGCTGTTGTGT+TGG | - | chr3.1:85429033-85429052 | MS.gene32585:intron | 30.0% |
| !!! | CTTTATTTTGCTTTGTAGCA+TGG | - | chr3.1:85428849-85428868 | MS.gene32585:intron | 30.0% |
| !!! | TCCATTTTTTTCTCTTAGTG+GGG | - | chr3.1:85428684-85428703 | MS.gene32585:intron | 30.0% |
| ACAATTTAACTGATCCTCAC+TGG | + | chr3.1:85431381-85431400 | None:intergenic | 35.0% | |
| ACATGTATACCCAAGACAAT+AGG | - | chr3.1:85431097-85431116 | MS.gene32585:CDS | 35.0% | |
| ACCCCACTAAGAGAAAAAAA+TGG | + | chr3.1:85428688-85428707 | None:intergenic | 35.0% | |
| AGATAAGTAACAGACTAGTG+GGG | - | chr3.1:85429256-85429275 | MS.gene32585:intron | 35.0% | |
| AGGCCAGTAAAGTAAAGAAA+AGG | + | chr3.1:85432179-85432198 | None:intergenic | 35.0% | |
| AGTAACACTTCGTCATCATT+AGG | + | chr3.1:85429534-85429553 | None:intergenic | 35.0% | |
| ATCAGATTTCTGCCGAAATA+TGG | - | chr3.1:85430381-85430400 | MS.gene32585:intron | 35.0% | |
| ATTCGCATCAATCTTAGTGT+TGG | + | chr3.1:85429610-85429629 | None:intergenic | 35.0% | |
| ATTGCTAAATATCCGGTTGT+AGG | - | chr3.1:85432373-85432392 | MS.gene32585:intron | 35.0% | |
| CAAACTATGTAGTATGCTTG+AGG | + | chr3.1:85431931-85431950 | None:intergenic | 35.0% | |
| CAACCAAAGACACAAAATTG+AGG | + | chr3.1:85428723-85428742 | None:intergenic | 35.0% | |
| CAATACATCTCGCATTTCAA+AGG | + | chr3.1:85431235-85431254 | None:intergenic | 35.0% | |
| CACAGATCCAAACTAATTTC+AGG | + | chr3.1:85430176-85430195 | None:intergenic | 35.0% | |
| CACATCTATAAGCTATCATG+AGG | + | chr3.1:85430983-85431002 | None:intergenic | 35.0% | |
| CATAAAAGATAGTCATCTGG+CGG | + | chr3.1:85430055-85430074 | None:intergenic | 35.0% | |
| CATCAATTTGGTAGAAAAGC+AGG | - | chr3.1:85429173-85429192 | MS.gene32585:CDS | 35.0% | |
| CATGTATACCCAAGACAATA+GGG | - | chr3.1:85431098-85431117 | MS.gene32585:CDS | 35.0% | |
| CATGTGAATGTTTGTGCATT+GGG | - | chr3.1:85428979-85428998 | MS.gene32585:intron | 35.0% | |
| CATTGATCAATCAATGCCTT+TGG | - | chr3.1:85431431-85431450 | MS.gene32585:CDS | 35.0% | |
| CCATCTCAATAAAACGAGAA+AGG | - | chr3.1:85431195-85431214 | MS.gene32585:CDS | 35.0% | |
| CTCCATAAAAGATAGTCATC+TGG | + | chr3.1:85430058-85430077 | None:intergenic | 35.0% | |
| CTTCACAAACTCATAACAGA+AGG | - | chr3.1:85431602-85431621 | MS.gene32585:CDS | 35.0% | |
| GACCATAAATTTGCATACCA+AGG | + | chr3.1:85428816-85428835 | None:intergenic | 35.0% | |
| GAGATAAGTAACAGACTAGT+GGG | - | chr3.1:85429255-85429274 | MS.gene32585:intron | 35.0% | |
| GTTTGATGCAAAATGCTAGA+AGG | + | chr3.1:85430632-85430651 | None:intergenic | 35.0% | |
| TAAAGATACCAGAAATCCGA+CGG | - | chr3.1:85432420-85432439 | MS.gene32585:CDS | 35.0% | |
| TAGAAACTGCAATATGAGTG+TGG | + | chr3.1:85430434-85430453 | None:intergenic | 35.0% | |
| TATGCAGGCTGATGTTATAA+TGG | - | chr3.1:85431687-85431706 | MS.gene32585:CDS | 35.0% | |
| TCAAAACTCGCATTTGATGA+AGG | - | chr3.1:85429353-85429372 | MS.gene32585:intron | 35.0% | |
| TCAAGTCTAAAAGTAACGCT+CGG | + | chr3.1:85431304-85431323 | None:intergenic | 35.0% | |
| TCATGTGAATGTTTGTGCAT+TGG | - | chr3.1:85428978-85428997 | MS.gene32585:intron | 35.0% | |
| TGAGATAAGTAACAGACTAG+TGG | - | chr3.1:85429254-85429273 | MS.gene32585:intron | 35.0% | |
| TGAGTATCAACGCCATATTT+CGG | + | chr3.1:85430396-85430415 | None:intergenic | 35.0% | |
| TGCCAGAAAAATCACTTCTT+GGG | + | chr3.1:85429233-85429252 | None:intergenic | 35.0% | |
| TTCAATCACTACCAATTTGG+AGG | + | chr3.1:85431987-85432006 | None:intergenic | 35.0% | |
| TTGATGCGAATAAATGGGAA+CGG | - | chr3.1:85429619-85429638 | MS.gene32585:intron | 35.0% | |
| TTGCTAAATATCCGGTTGTA+GGG | - | chr3.1:85432374-85432393 | MS.gene32585:intron | 35.0% | |
| TTGGATCTGTGAATCATCAT+GGG | - | chr3.1:85430185-85430204 | MS.gene32585:intron | 35.0% | |
| TTTGGATCTGTGAATCATCA+TGG | - | chr3.1:85430184-85430203 | MS.gene32585:intron | 35.0% | |
| TTTGTGTCTTTGGTTGGATT+TGG | - | chr3.1:85428727-85428746 | MS.gene32585:intron | 35.0% | |
| ! | AAAACAGTCTTTTCTCTTGC+CGG | - | chr3.1:85430580-85430599 | MS.gene32585:intron | 35.0% |
| ! | AACGATAGTAACTTGCATAG+TGG | - | chr3.1:85431778-85431797 | MS.gene32585:intron | 35.0% |
| ! | AACTAGCTTCAAACAAGCTT+AGG | - | chr3.1:85429715-85429734 | MS.gene32585:intron | 35.0% |
| ! | AATGATGACGAAGTGTTACT+TGG | - | chr3.1:85429534-85429553 | MS.gene32585:intron | 35.0% |
| ! | ACAAAAAGGATCAGTGGATT+TGG | + | chr3.1:85432151-85432170 | None:intergenic | 35.0% |
| ! | ACTAGCTTCAAACAAGCTTA+GGG | - | chr3.1:85429716-85429735 | MS.gene32585:intron | 35.0% |
| ! | CAGATGACTATCTTTTATGG+AGG | - | chr3.1:85430056-85430075 | MS.gene32585:intron | 35.0% |
| ! | CATAGTGGAGAAAATGAAAC+AGG | - | chr3.1:85431793-85431812 | MS.gene32585:intron | 35.0% |
| ! | CTCAATTTTGTGTCTTTGGT+TGG | - | chr3.1:85428721-85428740 | MS.gene32585:intron | 35.0% |
| ! | GAGACACATATAGTTTGTCT+TGG | - | chr3.1:85431570-85431589 | MS.gene32585:intron | 35.0% |
| ! | GCTTTTCTACCAAATTGATG+AGG | + | chr3.1:85429173-85429192 | None:intergenic | 35.0% |
| ! | GTAGTGTGTTTGAAGTTAGT+TGG | - | chr3.1:85428775-85428794 | MS.gene32585:intron | 35.0% |
| ! | TAAGCTTGTTTGAAGCTAGT+TGG | + | chr3.1:85429716-85429735 | None:intergenic | 35.0% |
| ! | TGTTTTACCCCTCATCAATT+TGG | - | chr3.1:85429161-85429180 | MS.gene32585:CDS | 35.0% |
| ! | TTCCCTCAATTTTGTGTCTT+TGG | - | chr3.1:85428717-85428736 | MS.gene32585:intron | 35.0% |
| ! | TTCTAAATTCCGACTTGAGT+TGG | - | chr3.1:85431405-85431424 | MS.gene32585:CDS | 35.0% |
| ! | TTGGTAGTCATTGCACAATA+TGG | - | chr3.1:85430460-85430479 | MS.gene32585:intron | 35.0% |
| !! | ATCCATCAAGAATTTTGAGG+CGG | - | chr3.1:85430656-85430675 | MS.gene32585:intron | 35.0% |
| !! | CCTTTCTCGTTTTATTGAGA+TGG | + | chr3.1:85431198-85431217 | None:intergenic | 35.0% |
| !! | GAAAATATTCGAGTTGGTAC+GGG | + | chr3.1:85432253-85432272 | None:intergenic | 35.0% |
| !! | GATGTTATAATGGCTTTAGC+TGG | - | chr3.1:85431697-85431716 | MS.gene32585:CDS | 35.0% |
| !!! | CATCAAATGCGAGTTTTGAA+AGG | + | chr3.1:85429352-85429371 | None:intergenic | 35.0% |
| !!! | CTTAAGTCCTGTTTTTGTAC+AGG | - | chr3.1:85429470-85429489 | MS.gene32585:intron | 35.0% |
| AAGCTTAGGGATACCATTTC+AGG | - | chr3.1:85429729-85429748 | MS.gene32585:intron | 40.0% | |
| ACCAAAATCTACTGCAAAGC+TGG | - | chr3.1:85431753-85431772 | MS.gene32585:CDS | 40.0% | |
| ACTACTGCAGACGATATGTT+TGG | + | chr3.1:85432030-85432049 | None:intergenic | 40.0% | |
| ACTACTGTAAGAGTGGAGTT+TGG | + | chr3.1:85431044-85431063 | None:intergenic | 40.0% | |
| ACTGCAATATGAGTGTGGTA+CGG | + | chr3.1:85430429-85430448 | None:intergenic | 40.0% | |
| CAGGCTGAGAGATAAATGAA+GGG | + | chr3.1:85429755-85429774 | None:intergenic | 40.0% | |
| CCTGAAATCTTAACCAAGCA+GGG | - | chr3.1:85430804-85430823 | MS.gene32585:intron | 40.0% | |
| CCTGCTTGGTTAAGATTTCA+GGG | + | chr3.1:85430806-85430825 | None:intergenic | 40.0% | |
| CGCCTTGGTATGCAAATTTA+TGG | - | chr3.1:85428811-85428830 | MS.gene32585:intron | 40.0% | |
| CTACTGCAGACGATATGTTT+GGG | + | chr3.1:85432029-85432048 | None:intergenic | 40.0% | |
| CTACTGTAAGAGTGGAGTTT+GGG | + | chr3.1:85431043-85431062 | None:intergenic | 40.0% | |
| GATAAATGAAGGGCCTGAAA+TGG | + | chr3.1:85429745-85429764 | None:intergenic | 40.0% | |
| GATGACACAAAAAGGATCAG+TGG | + | chr3.1:85432157-85432176 | None:intergenic | 40.0% | |
| GCTGAATGAGAATCAAAGAG+GGG | + | chr3.1:85431021-85431040 | None:intergenic | 40.0% | |
| GGCTGAATGAGAATCAAAGA+GGG | + | chr3.1:85431022-85431041 | None:intergenic | 40.0% | |
| GTAGTATGCTTGAGGATTAC+CGG | + | chr3.1:85431923-85431942 | None:intergenic | 40.0% | |
| GTAGTCATTGCACAATATGG+TGG | - | chr3.1:85430463-85430482 | MS.gene32585:intron | 40.0% | |
| GTCTGTGGTTTATTCGTGAT+TGG | - | chr3.1:85430234-85430253 | MS.gene32585:intron | 40.0% | |
| GTGCCAGAAAAATCACTTCT+TGG | + | chr3.1:85429234-85429253 | None:intergenic | 40.0% | |
| TACAAGGTTGGACCTTATGT+TGG | + | chr3.1:85430109-85430128 | None:intergenic | 40.0% | |
| TACTGCAGACGATATGTTTG+GGG | + | chr3.1:85432028-85432047 | None:intergenic | 40.0% | |
| TCAATGTAGCCAACTCAAGT+CGG | + | chr3.1:85431417-85431436 | None:intergenic | 40.0% | |
| TCATATGCACTCTCAACGAA+AGG | + | chr3.1:85430758-85430777 | None:intergenic | 40.0% | |
| TCCTTAAAAAACTCGGTCTG+TGG | - | chr3.1:85430219-85430238 | MS.gene32585:intron | 40.0% | |
| TGCTAAATATCCGGTTGTAG+GGG | - | chr3.1:85432375-85432394 | MS.gene32585:intron | 40.0% | |
| TTCTGATTTCTAAGTGGGGT+AGG | - | chr3.1:85431132-85431151 | MS.gene32585:CDS | 40.0% | |
| ! | AACAGGGTTAGTGAGTAATG+TGG | - | chr3.1:85431810-85431829 | MS.gene32585:intron | 40.0% |
| ! | ACCAGCTTTGCAGTAGATTT+TGG | + | chr3.1:85431757-85431776 | None:intergenic | 40.0% |
| ! | CGCCAGATGACTATCTTTTA+TGG | - | chr3.1:85430053-85430072 | MS.gene32585:intron | 40.0% |
| ! | GGATCTAGAACTGGAATCAA+AGG | - | chr3.1:85429786-85429805 | MS.gene32585:intron | 40.0% |
| ! | TGATGATGTCCACCAACATA+AGG | - | chr3.1:85430094-85430113 | MS.gene32585:intron | 40.0% |
| !! | AGTTCTAGATCCTTCATCAG+CGG | + | chr3.1:85429778-85429797 | None:intergenic | 40.0% |
| !! | GCATCAATCTTAGTGTTGGT+GGG | + | chr3.1:85429606-85429625 | None:intergenic | 40.0% |
| !! | TTAAGCTTTGGGTACACTGA+TGG | - | chr3.1:85430546-85430565 | MS.gene32585:intron | 40.0% |
| !! | TTAGGAGTACTTACCAGAAG+CGG | + | chr3.1:85428578-85428597 | None:intergenic | 40.0% |
| !!! | ACCACAGACCGAGTTTTTTA+AGG | + | chr3.1:85430223-85430242 | None:intergenic | 40.0% |
| !!! | GCGAGTTTTGAAAGGAATCA+GGG | + | chr3.1:85429344-85429363 | None:intergenic | 40.0% |
| !!! | TGCGAGTTTTGAAAGGAATC+AGG | + | chr3.1:85429345-85429364 | None:intergenic | 40.0% |
| !!! | TGGTTTTTGGTAAAGCCCAA+AGG | + | chr3.1:85431450-85431469 | None:intergenic | 40.0% |
| AACTTCCCATGAAGCTCTTG+TGG | + | chr3.1:85431841-85431860 | None:intergenic | 45.0% | |
| AAGGTTGGACCTTATGTTGG+TGG | + | chr3.1:85430106-85430125 | None:intergenic | 45.0% | |
| ACTTCCCATGAAGCTCTTGT+GGG | + | chr3.1:85431840-85431859 | None:intergenic | 45.0% | |
| AGCAGTAGCAGCTGTGTTTA+TGG | + | chr3.1:85429829-85429848 | None:intergenic | 45.0% | |
| CATTCCCACAAGAGCTTCAT+GGG | - | chr3.1:85431833-85431852 | MS.gene32585:intron | 45.0% | |
| CCCTGAAATCTTAACCAAGC+AGG | - | chr3.1:85430803-85430822 | MS.gene32585:intron | 45.0% | |
| CCCTGCTTGGTTAAGATTTC+AGG | + | chr3.1:85430807-85430826 | None:intergenic | 45.0% | |
| CGGTCTATTCTCATGAATGC+TGG | - | chr3.1:85429639-85429658 | MS.gene32585:intron | 45.0% | |
| CTCCAGAGATGCCTTTCAAA+TGG | - | chr3.1:85429317-85429336 | MS.gene32585:intron | 45.0% | |
| GCAGGCTGAGAGATAAATGA+AGG | + | chr3.1:85429756-85429775 | None:intergenic | 45.0% | |
| GGAATCAGGGACCATTTGAA+AGG | + | chr3.1:85429331-85429350 | None:intergenic | 45.0% | |
| GGAGTAGATACACGATCAAC+AGG | + | chr3.1:85431898-85431917 | None:intergenic | 45.0% | |
| GGGCTGAATGAGAATCAAAG+AGG | + | chr3.1:85431023-85431042 | None:intergenic | 45.0% | |
| GTACTTACCAGAAGCGGTTT+CGG | + | chr3.1:85428572-85428591 | None:intergenic | 45.0% | |
| GTATTGAGCAGCAGTCAACA+TGG | - | chr3.1:85430014-85430033 | MS.gene32585:intron | 45.0% | |
| GTCCGCCTCAAAATTCTTGA+TGG | + | chr3.1:85430661-85430680 | None:intergenic | 45.0% | |
| TACACGATCAACAGGTCCAA+CGG | + | chr3.1:85431890-85431909 | None:intergenic | 45.0% | |
| TCACTTCTTGGGCCATAGAA+CGG | + | chr3.1:85429222-85429241 | None:intergenic | 45.0% | |
| TCTGGAGGAACCCATAAATG+AGG | + | chr3.1:85429304-85429323 | None:intergenic | 45.0% | |
| TTATAGATGTGAAGCCTGCC+CGG | - | chr3.1:85430992-85431011 | MS.gene32585:intron | 45.0% | |
| ! | ATTTCATCTGCAGTGCTGCT+CGG | - | chr3.1:85429858-85429877 | MS.gene32585:intron | 45.0% |
| ! | CATGACTTTTGCACGCTCTT+TGG | - | chr3.1:85431662-85431681 | MS.gene32585:CDS | 45.0% |
| ! | CGCATCAATCTTAGTGTTGG+TGG | + | chr3.1:85429607-85429626 | None:intergenic | 45.0% |
| ! | GAAGCTAGTTGGTGTGCAAA+AGG | + | chr3.1:85429705-85429724 | None:intergenic | 45.0% |
| ! | GCTCTTTTGTCTTCGGAACT+GGG | + | chr3.1:85432460-85432479 | None:intergenic | 45.0% |
| ! | GCTGATGAAGGATCTAGAAC+TGG | - | chr3.1:85429777-85429796 | MS.gene32585:intron | 45.0% |
| ! | GGCCCAAGAAGTGATTTTTC+TGG | - | chr3.1:85429228-85429247 | MS.gene32585:CDS | 45.0% |
| ! | TCACTGCGCTCTTTTGTCTT+CGG | + | chr3.1:85432467-85432486 | None:intergenic | 45.0% |
| !! | ATGGCTTTAGCTGGGTCAAA+TGG | - | chr3.1:85431706-85431725 | MS.gene32585:CDS | 45.0% |
| !! | CAGGTATCGAATCATCTCGA+GGG | - | chr3.1:85429192-85429211 | MS.gene32585:CDS | 45.0% |
| !! | CATTTGAAAGGCATCTCTGG+AGG | + | chr3.1:85429319-85429338 | None:intergenic | 45.0% |
| !! | GACCATTTGAAAGGCATCTC+TGG | + | chr3.1:85429322-85429341 | None:intergenic | 45.0% |
| !! | GGAGTTGATTGTTTTCGCCT+TGG | - | chr3.1:85428796-85428815 | MS.gene32585:intron | 45.0% |
| !! | TCAATCTTAGTGTTGGTGGG+TGG | + | chr3.1:85429603-85429622 | None:intergenic | 45.0% |
| AAAGATAGTCATCTGGCGGC+TGG | + | chr3.1:85430051-85430070 | None:intergenic | 50.0% | |
| ACCCAAGACAATAGGGTGCA+GGG | - | chr3.1:85431105-85431124 | MS.gene32585:CDS | 50.0% | |
| AGAACTGGAATCAAAGGCCC+CGG | - | chr3.1:85429792-85429811 | MS.gene32585:intron | 50.0% | |
| AGAATCAAAGAGGGGACTCC+GGG | + | chr3.1:85431013-85431032 | None:intergenic | 50.0% | |
| ATAGATTTACCTTGGGGGCG+TGG | + | chr3.1:85429925-85429944 | None:intergenic | 50.0% | |
| CATGGGAAGTTGTCTGCTAC+TGG | - | chr3.1:85431850-85431869 | MS.gene32585:intron | 50.0% | |
| CGGAGGACCTGTACAAAAAC+AGG | + | chr3.1:85429480-85429499 | None:intergenic | 50.0% | |
| CTGATACTTCCACCGACGTT+AGG | - | chr3.1:85428485-85428504 | MS.gene32585:CDS | 50.0% | |
| GAGAATCAAAGAGGGGACTC+CGG | + | chr3.1:85431014-85431033 | None:intergenic | 50.0% | |
| GATCGTGTATCTACTCCAGC+CGG | - | chr3.1:85431901-85431920 | MS.gene32585:intron | 50.0% | |
| GCATTCCCACAAGAGCTTCA+TGG | - | chr3.1:85431832-85431851 | MS.gene32585:intron | 50.0% | |
| GCTTTAGCTGGGTCAAATGG+TGG | - | chr3.1:85431709-85431728 | MS.gene32585:CDS | 50.0% | |
| GTGGGGTAGGAAAACTGTAG+TGG | - | chr3.1:85431145-85431164 | MS.gene32585:CDS | 50.0% | |
| GTTAGACATGCACTCCCTGA+AGG | - | chr3.1:85430720-85430739 | MS.gene32585:intron | 50.0% | |
| TACCCAAGACAATAGGGTGC+AGG | - | chr3.1:85431104-85431123 | MS.gene32585:CDS | 50.0% | |
| TATGCTTGAGGATTACCGGC+TGG | + | chr3.1:85431919-85431938 | None:intergenic | 50.0% | |
| TCCCTGCACCCTATTGTCTT+GGG | + | chr3.1:85431109-85431128 | None:intergenic | 50.0% | |
| TCTCTCCTCCAGACGCATTT+CGG | + | chr3.1:85429500-85429519 | None:intergenic | 50.0% | |
| TGCTTGAACCGTCGGATTTC+TGG | + | chr3.1:85432431-85432450 | None:intergenic | 50.0% | |
| TTCCACCGACGTTAGGTTAC+CGG | - | chr3.1:85428492-85428511 | MS.gene32585:CDS | 50.0% | |
| TTCCCTGCACCCTATTGTCT+TGG | + | chr3.1:85431110-85431129 | None:intergenic | 50.0% | |
| TTGGTACGGGCAAGGTCTAA+AGG | + | chr3.1:85432240-85432259 | None:intergenic | 50.0% | |
| ! | CGCGCAGTTTTCGATCTCAA+CGG | + | chr3.1:85432117-85432136 | None:intergenic | 50.0% |
| ! | CGCTCTTTTGTCTTCGGAAC+TGG | + | chr3.1:85432461-85432480 | None:intergenic | 50.0% |
| !! | AACGTCGGTGGAAGTATCAG+TGG | + | chr3.1:85428485-85428504 | None:intergenic | 50.0% |
| !! | ACGTCGGTGGAAGTATCAGT+GGG | + | chr3.1:85428484-85428503 | None:intergenic | 50.0% |
| !! | CTGGGTCAAATGGTGGATCT+TGG | - | chr3.1:85431716-85431735 | MS.gene32585:CDS | 50.0% |
| !! | GCAGGTATCGAATCATCTCG+AGG | - | chr3.1:85429191-85429210 | MS.gene32585:CDS | 50.0% |
| !! | TATTCGAGTTGGTACGGGCA+AGG | + | chr3.1:85432248-85432267 | None:intergenic | 50.0% |
| AGGAGCTCTGTTGCTCCTTC+AGG | + | chr3.1:85430738-85430757 | None:intergenic | 55.0% | |
| CTAGATCCTTCATCAGCGGC+AGG | + | chr3.1:85429774-85429793 | None:intergenic | 55.0% | |
| CTCGAGGGAGTTCCGTTCTA+TGG | - | chr3.1:85429207-85429226 | MS.gene32585:CDS | 55.0% | |
| CTGGAGGAGAGAGATCGAGA+AGG | - | chr3.1:85429508-85429527 | MS.gene32585:intron | 55.0% | |
| CTTACCAGAAGCGGTTTCGG+AGG | + | chr3.1:85428569-85428588 | None:intergenic | 55.0% | |
| GATCAACAGGTCCAACGGCA+CGG | + | chr3.1:85431885-85431904 | None:intergenic | 55.0% | |
| GGAGCTCTGTTGCTCCTTCA+GGG | + | chr3.1:85430737-85430756 | None:intergenic | 55.0% | |
| TAGAATCATCCACGCCCCCA+AGG | - | chr3.1:85429913-85429932 | MS.gene32585:intron | 55.0% | |
| TGCCTCCGGTAACCTAACGT+CGG | + | chr3.1:85428500-85428519 | None:intergenic | 55.0% | |
| TTTCGGAGGTGGGGGAGAAA+GGG | + | chr3.1:85428555-85428574 | None:intergenic | 55.0% | |
| ! | GCACGCTCTTTGGTGTATGC+AGG | - | chr3.1:85431672-85431691 | MS.gene32585:CDS | 55.0% |
| ! | GGATCTGCTGCTTGAACCGT+CGG | + | chr3.1:85432439-85432458 | None:intergenic | 55.0% |
| ACCAGAAGCGGTTTCGGAGG+TGG | + | chr3.1:85428566-85428585 | None:intergenic | 60.0% | |
| AGAAGCGGTTTCGGAGGTGG+GGG | + | chr3.1:85428563-85428582 | None:intergenic | 60.0% | |
| ATAGTCATCTGGCGGCTGGC+AGG | + | chr3.1:85430047-85430066 | None:intergenic | 60.0% | |
| CACCGACGTTAGGTTACCGG+AGG | - | chr3.1:85428495-85428514 | MS.gene32585:CDS | 60.0% | |
| CAGAAGCGGTTTCGGAGGTG+GGG | + | chr3.1:85428564-85428583 | None:intergenic | 60.0% | |
| CAGGTCCTCCGAAATGCGTC+TGG | - | chr3.1:85429489-85429508 | MS.gene32585:intron | 60.0% | |
| CCAGAAGCGGTTTCGGAGGT+GGG | + | chr3.1:85428565-85428584 | None:intergenic | 60.0% | |
| CCTTGATGCGCCCCTACAAC+CGG | + | chr3.1:85432388-85432407 | None:intergenic | 60.0% | |
| CTCCGGTAACCTAACGTCGG+TGG | + | chr3.1:85428497-85428516 | None:intergenic | 60.0% | |
| CTCCTCCAGACGCATTTCGG+AGG | + | chr3.1:85429497-85429516 | None:intergenic | 60.0% | |
| GAGGCTGATGCTGATGCCTC+CGG | + | chr3.1:85428514-85428533 | None:intergenic | 60.0% | |
| GCGGAGGATGCTGCATGGAA+GGG | + | chr3.1:85429665-85429684 | None:intergenic | 60.0% | |
| GGAGTCAACTGTCCTGCACG+CGG | + | chr3.1:85429684-85429703 | None:intergenic | 60.0% | |
| GTCCTCCGAAATGCGTCTGG+AGG | - | chr3.1:85429492-85429511 | MS.gene32585:intron | 60.0% | |
| GTTTCGGAGGTGGGGGAGAA+AGG | + | chr3.1:85428556-85428575 | None:intergenic | 60.0% | |
| TCTCAGCCTGCCGCTGATGA+AGG | - | chr3.1:85429765-85429784 | MS.gene32585:intron | 60.0% | |
| ! | TCATCTGCAGTGCTGCTCGG+TGG | - | chr3.1:85429861-85429880 | MS.gene32585:intron | 60.0% |
| ATGCAGCATCCTCCGCGTGC+AGG | - | chr3.1:85429669-85429688 | MS.gene32585:intron | 65.0% | |
| CCCACCTCCGAAACCGCTTC+TGG | - | chr3.1:85428562-85428581 | MS.gene32585:intron | 65.0% | |
| CGCGGAGGATGCTGCATGGA+AGG | + | chr3.1:85429666-85429685 | None:intergenic | 65.0% | |
| GCTCGAGTCGAGACCCTGCT+TGG | + | chr3.1:85430820-85430839 | None:intergenic | 65.0% | |
| GGAGAAAGGGCCACGAGCAC+CGG | + | chr3.1:85428542-85428561 | None:intergenic | 65.0% | |
| GTCAACTGTCCTGCACGCGG+AGG | + | chr3.1:85429681-85429700 | None:intergenic | 65.0% | |
| TCAAAGAGGGGACTCCGGGC+AGG | + | chr3.1:85431009-85431028 | None:intergenic | 65.0% | |
| TCAGCATCAGCCTCCTCCGC+CGG | - | chr3.1:85428520-85428539 | MS.gene32585:CDS | 65.0% | |
| TGCACGCGGAGGATGCTGCA+TGG | + | chr3.1:85429670-85429689 | None:intergenic | 65.0% | |
| ! | CCGGTTGTAGGGGCGCATCA+AGG | - | chr3.1:85432385-85432404 | MS.gene32585:CDS | 65.0% |
| ! | GGCAGTTCTAGCCGTGCCGT+TGG | - | chr3.1:85431871-85431890 | MS.gene32585:intron | 65.0% |
| !! | GAAAGGGCCACGAGCACCGG+CGG | + | chr3.1:85428539-85428558 | None:intergenic | 70.0% |
| ! | GCCTCCTCCGCCGGTGCTCG+TGG | - | chr3.1:85428529-85428548 | MS.gene32585:CDS | 80.0% |
| !!! | AGGGCCACGAGCACCGGCGG+AGG | + | chr3.1:85428536-85428555 | None:intergenic | 80.0% |
| !!! | GCCACGAGCACCGGCGGAGG+AGG | + | chr3.1:85428533-85428552 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85428475 | 85432486 | 85428475 | ID=MS.gene32585 |
| chr3.1 | mRNA | 85428475 | 85432486 | 85428475 | ID=MS.gene32585.t1;Parent=MS.gene32585 |
| chr3.1 | exon | 85432378 | 85432486 | 85432378 | ID=MS.gene32585.t1.exon1;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85432378 | 85432486 | 85432378 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| chr3.1 | exon | 85431587 | 85431774 | 85431587 | ID=MS.gene32585.t1.exon2;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85431587 | 85431774 | 85431587 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| chr3.1 | exon | 85431027 | 85431469 | 85431027 | ID=MS.gene32585.t1.exon3;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85431027 | 85431469 | 85431027 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| chr3.1 | exon | 85430846 | 85430936 | 85430846 | ID=MS.gene32585.t1.exon4;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85430846 | 85430936 | 85430846 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| chr3.1 | exon | 85429039 | 85429267 | 85429039 | ID=MS.gene32585.t1.exon5;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85429039 | 85429267 | 85429039 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| chr3.1 | exon | 85428475 | 85428566 | 85428475 | ID=MS.gene32585.t1.exon6;Parent=MS.gene32585.t1 |
| chr3.1 | CDS | 85428475 | 85428566 | 85428475 | ID=cds.MS.gene32585.t1;Parent=MS.gene32585.t1 |
| Gene Sequence |
| Protein sequence |
