Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32877.t1 | XP_013461785.1 | 96 | 843 | 34 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1105.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32877.t1 | F4IXE7 | 31.0 | 423 | 274 | 6 | 425 | 840 | 620 | 1031 | 3.9e-58 | 228.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32877.t1 | A0A072VCE4 | 96.0 | 843 | 34 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1105.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene32877.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32877.t1 | MTR_3g103120 | 95.611 | 843 | 37 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1614 |
MS.gene32877.t1 | MTR_7g109640 | 61.566 | 843 | 275 | 8 | 1 | 841 | 1 | 796 | 0.0 | 982 |
MS.gene32877.t1 | MTR_3g103110 | 58.322 | 715 | 179 | 7 | 235 | 841 | 97 | 800 | 0.0 | 750 |
MS.gene32877.t1 | MTR_3g103110 | 73.303 | 221 | 51 | 3 | 1 | 221 | 1 | 213 | 1.81e-88 | 298 |
MS.gene32877.t1 | MTR_5g024390 | 67.654 | 439 | 108 | 3 | 425 | 841 | 2 | 428 | 0.0 | 627 |
MS.gene32877.t1 | MTR_5g024500 | 66.970 | 439 | 111 | 3 | 425 | 841 | 2 | 428 | 0.0 | 618 |
MS.gene32877.t1 | MTR_5g071340 | 41.649 | 485 | 258 | 9 | 359 | 834 | 618 | 1086 | 4.16e-109 | 361 |
MS.gene32877.t1 | MTR_3g464550 | 43.029 | 416 | 220 | 8 | 425 | 832 | 602 | 1008 | 1.33e-101 | 340 |
MS.gene32877.t1 | MTR_3g103160 | 41.187 | 539 | 197 | 14 | 314 | 834 | 2 | 438 | 1.09e-90 | 293 |
MS.gene32877.t1 | MTR_2g078040 | 36.343 | 443 | 259 | 9 | 404 | 836 | 741 | 1170 | 2.03e-75 | 268 |
MS.gene32877.t1 | MTR_1g103830 | 32.417 | 509 | 301 | 10 | 358 | 832 | 513 | 1012 | 1.61e-70 | 254 |
MS.gene32877.t1 | MTR_1g072130 | 34.043 | 423 | 259 | 7 | 423 | 834 | 809 | 1222 | 1.63e-68 | 248 |
MS.gene32877.t1 | MTR_7g095140 | 31.056 | 322 | 200 | 4 | 519 | 838 | 6 | 307 | 2.51e-48 | 176 |
MS.gene32877.t1 | MTR_1g068930 | 27.296 | 392 | 223 | 11 | 459 | 807 | 458 | 830 | 1.80e-39 | 157 |
MS.gene32877.t1 | MTR_1g068930 | 27.296 | 392 | 223 | 11 | 459 | 807 | 495 | 867 | 2.14e-39 | 157 |
MS.gene32877.t1 | MTR_4g099530 | 23.598 | 428 | 268 | 10 | 425 | 832 | 110 | 498 | 4.76e-33 | 135 |
MS.gene32877.t1 | MTR_1g062330 | 25.463 | 432 | 238 | 13 | 460 | 827 | 386 | 797 | 1.12e-29 | 127 |
MS.gene32877.t1 | MTR_4g050090 | 24.664 | 446 | 239 | 14 | 460 | 835 | 226 | 644 | 7.44e-29 | 124 |
MS.gene32877.t1 | MTR_4g056990 | 25.052 | 483 | 265 | 16 | 395 | 814 | 152 | 600 | 2.42e-27 | 118 |
MS.gene32877.t1 | MTR_4g057290 | 25.359 | 418 | 228 | 13 | 460 | 814 | 126 | 522 | 4.07e-26 | 114 |
MS.gene32877.t1 | MTR_7g102610 | 29.615 | 260 | 153 | 9 | 590 | 830 | 697 | 945 | 9.08e-23 | 105 |
MS.gene32877.t1 | MTR_7g102610 | 36.036 | 111 | 60 | 2 | 460 | 569 | 531 | 631 | 9.27e-15 | 79.3 |
MS.gene32877.t1 | MTR_6g061000 | 56.410 | 78 | 23 | 1 | 512 | 578 | 24 | 101 | 1.02e-21 | 90.9 |
MS.gene32877.t1 | MTR_2g084425 | 27.350 | 234 | 143 | 6 | 609 | 841 | 818 | 1025 | 2.21e-18 | 90.9 |
MS.gene32877.t1 | MTR_2g084425 | 25.088 | 283 | 144 | 7 | 408 | 642 | 447 | 709 | 1.34e-15 | 82.0 |
MS.gene32877.t1 | MTR_2g084425 | 25.088 | 283 | 144 | 7 | 408 | 642 | 447 | 709 | 2.45e-15 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 367 | 779 | 1.55e-99 | 329 |
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 598 | 1010 | 2.34e-97 | 327 |
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 598 | 1010 | 2.34e-97 | 327 |
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 598 | 1010 | 3.63e-97 | 328 |
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 589 | 1001 | 6.52e-97 | 327 |
MS.gene32877.t1 | AT5G58610 | 41.205 | 415 | 237 | 5 | 425 | 834 | 589 | 1001 | 8.33e-97 | 327 |
MS.gene32877.t1 | AT5G58610 | 38.983 | 413 | 223 | 5 | 425 | 834 | 589 | 975 | 3.29e-87 | 300 |
MS.gene32877.t1 | AT5G58610 | 39.225 | 413 | 222 | 5 | 425 | 834 | 589 | 975 | 4.12e-87 | 299 |
MS.gene32877.t1 | AT5G58610 | 40.720 | 361 | 207 | 5 | 425 | 780 | 598 | 956 | 1.04e-80 | 280 |
MS.gene32877.t1 | AT5G58610 | 40.720 | 361 | 207 | 5 | 425 | 780 | 589 | 947 | 1.85e-80 | 279 |
MS.gene32877.t1 | AT1G05380 | 33.495 | 412 | 265 | 4 | 425 | 832 | 519 | 925 | 2.28e-70 | 253 |
MS.gene32877.t1 | AT1G05380 | 33.495 | 412 | 265 | 4 | 425 | 832 | 519 | 925 | 2.28e-70 | 253 |
MS.gene32877.t1 | AT1G05380 | 33.495 | 412 | 265 | 4 | 425 | 832 | 519 | 925 | 2.28e-70 | 253 |
MS.gene32877.t1 | AT5G36740 | 33.257 | 436 | 275 | 7 | 406 | 836 | 529 | 953 | 7.39e-70 | 251 |
MS.gene32877.t1 | AT5G36740 | 33.257 | 436 | 275 | 7 | 406 | 836 | 529 | 953 | 7.39e-70 | 251 |
MS.gene32877.t1 | AT5G36740 | 32.511 | 446 | 275 | 8 | 406 | 836 | 376 | 810 | 4.56e-67 | 242 |
MS.gene32877.t1 | AT5G58610 | 39.319 | 323 | 189 | 5 | 425 | 742 | 589 | 909 | 6.77e-66 | 237 |
MS.gene32877.t1 | AT3G14980 | 32.075 | 424 | 268 | 7 | 425 | 840 | 575 | 986 | 1.33e-65 | 238 |
MS.gene32877.t1 | AT3G14980 | 32.075 | 424 | 268 | 7 | 425 | 840 | 620 | 1031 | 1.58e-65 | 238 |
MS.gene32877.t1 | AT3G14980 | 32.075 | 424 | 268 | 7 | 425 | 840 | 620 | 1031 | 1.58e-65 | 238 |
MS.gene32877.t1 | AT3G14980 | 32.075 | 424 | 268 | 7 | 425 | 840 | 620 | 1031 | 1.58e-65 | 238 |
MS.gene32877.t1 | AT3G14980 | 32.075 | 424 | 268 | 7 | 425 | 840 | 620 | 1031 | 2.26e-65 | 237 |
MS.gene32877.t1 | AT5G36670 | 31.416 | 452 | 276 | 9 | 406 | 836 | 529 | 967 | 7.21e-62 | 228 |
MS.gene32877.t1 | AT5G36670 | 31.416 | 452 | 276 | 9 | 406 | 836 | 529 | 967 | 7.21e-62 | 228 |
MS.gene32877.t1 | AT4G14920 | 30.660 | 424 | 283 | 5 | 422 | 841 | 576 | 992 | 4.68e-60 | 222 |
MS.gene32877.t1 | AT4G14920 | 30.660 | 424 | 283 | 5 | 422 | 841 | 576 | 992 | 5.35e-60 | 222 |
MS.gene32877.t1 | AT4G14920 | 30.660 | 424 | 283 | 5 | 422 | 841 | 576 | 992 | 5.35e-60 | 222 |
MS.gene32877.t1 | AT5G36740 | 33.422 | 374 | 233 | 7 | 406 | 774 | 529 | 891 | 2.70e-59 | 218 |
MS.gene32877.t1 | AT5G36740 | 33.422 | 374 | 233 | 7 | 406 | 774 | 529 | 891 | 2.70e-59 | 218 |
MS.gene32877.t1 | AT5G36670 | 33.422 | 374 | 233 | 7 | 406 | 774 | 529 | 891 | 2.70e-59 | 218 |
MS.gene32877.t1 | AT5G36670 | 30.736 | 462 | 276 | 10 | 406 | 836 | 376 | 824 | 8.57e-59 | 218 |
MS.gene32877.t1 | AT5G36670 | 30.736 | 462 | 276 | 10 | 406 | 836 | 529 | 977 | 2.98e-58 | 217 |
MS.gene32877.t1 | AT5G63900 | 34.111 | 343 | 191 | 11 | 504 | 836 | 227 | 544 | 3.23e-53 | 195 |
MS.gene32877.t1 | AT3G14980 | 31.804 | 327 | 203 | 7 | 425 | 743 | 620 | 934 | 2.93e-45 | 176 |
MS.gene32877.t1 | AT2G37520 | 27.126 | 435 | 230 | 14 | 460 | 834 | 410 | 817 | 1.78e-40 | 160 |
MS.gene32877.t1 | AT3G53680 | 29.648 | 398 | 211 | 14 | 460 | 807 | 427 | 805 | 1.33e-38 | 155 |
MS.gene32877.t1 | AT3G53680 | 29.574 | 399 | 210 | 14 | 460 | 807 | 429 | 807 | 1.45e-38 | 155 |
MS.gene32877.t1 | AT2G36720 | 24.691 | 486 | 270 | 10 | 409 | 832 | 522 | 973 | 1.25e-36 | 149 |
MS.gene32877.t1 | AT2G36720 | 24.691 | 486 | 270 | 10 | 409 | 832 | 522 | 973 | 1.25e-36 | 149 |
MS.gene32877.t1 | AT2G27980 | 26.230 | 488 | 262 | 13 | 421 | 835 | 598 | 1060 | 4.15e-35 | 144 |
Find 140 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCACTCTCGCTGGATTTA+AGG | 0.128168 | 3.1:+81590446 | MS.gene32877:CDS |
AAAACAACATCTTCTTTCTT+TGG | 0.186886 | 3.1:+81589177 | MS.gene32877:CDS |
TATTACTTTCTTAGAATTTC+AGG | 0.193107 | 3.1:+81591487 | MS.gene32877:CDS |
CACCATTCTCTTACAGCTTC+TGG | 0.208379 | 3.1:-81589091 | None:intergenic |
GTTTGTTCTATTTGTGGTTT+TGG | 0.227006 | 3.1:+81590624 | MS.gene32877:CDS |
CCAACAATTGATGCTTTATC+TGG | 0.227211 | 3.1:+81591119 | MS.gene32877:CDS |
GTACATTCTTGTTTACATTT+AGG | 0.250429 | 3.1:-81590768 | None:intergenic |
TTGTCCTCGATGTTCTTTCT+TGG | 0.259390 | 3.1:-81591306 | None:intergenic |
TGGTTTCTATAATGTGATTT+TGG | 0.261940 | 3.1:+81591205 | MS.gene32877:CDS |
GTGGCTACCATAAGGATTTA+TGG | 0.283165 | 3.1:+81591251 | MS.gene32877:CDS |
CACGCAGTGTAAGGCCATTT+AGG | 0.288596 | 3.1:-81591542 | None:intergenic |
TTTCTTTGGGTTGGAAGCTT+TGG | 0.293261 | 3.1:+81589191 | MS.gene32877:CDS |
ATCATCCACTAGTATCTTCT+TGG | 0.299268 | 3.1:+81590494 | MS.gene32877:CDS |
AAACAACATCTTCTTTCTTT+GGG | 0.299298 | 3.1:+81589178 | MS.gene32877:CDS |
ATTATTGTTGCTGCTGTTAC+TGG | 0.303084 | 3.1:-81589352 | None:intergenic |
TATTAAATAGAGAAGGTATA+AGG | 0.305895 | 3.1:+81590280 | MS.gene32877:CDS |
AGATTATCCGCAACCTTAAC+TGG | 0.315691 | 3.1:-81590972 | None:intergenic |
GTTGATAAAGAATAAAGTTT+TGG | 0.317891 | 3.1:+81590326 | MS.gene32877:CDS |
AAAGGTATTCACTTGTTTCT+TGG | 0.322354 | 3.1:+81590304 | MS.gene32877:CDS |
AACCACTGAAGAAACCTAAA+TGG | 0.332081 | 3.1:+81591528 | MS.gene32877:CDS |
TCAGGCACTATGTTCATATC+AGG | 0.336590 | 3.1:-81589061 | None:intergenic |
AGAGAATGGTGCCGCTTAAC+AGG | 0.346625 | 3.1:+81589103 | MS.gene32877:CDS |
GAAAATGGAGGAAGTGATTT+CGG | 0.358446 | 3.1:+81591229 | MS.gene32877:CDS |
GATACTGTTTGTTCTATTTG+TGG | 0.359159 | 3.1:+81590618 | MS.gene32877:CDS |
GACACATGGACAAAATCTTT+TGG | 0.362557 | 3.1:+81591422 | MS.gene32877:CDS |
GCAATATAGTTTGCGCGAAC+AGG | 0.368324 | 3.1:+81590919 | MS.gene32877:CDS |
GGTTTCTCTTTCAACTGTAA+TGG | 0.368815 | 3.1:-81589853 | None:intergenic |
GTGAGCAGAAATTTCACTTT+GGG | 0.378660 | 3.1:+81590829 | MS.gene32877:CDS |
TTTAGATCTTGATCGAGTTC+CGG | 0.381635 | 3.1:+81590698 | MS.gene32877:CDS |
GTTACTGGTGCTGCAGTTGA+AGG | 0.385036 | 3.1:-81589337 | None:intergenic |
ATCGAGTTCCGGATGGTGAT+TGG | 0.385313 | 3.1:+81590709 | MS.gene32877:CDS |
TAGGTTTCTTCAGTGGTTTA+AGG | 0.387281 | 3.1:-81591523 | None:intergenic |
TGCTATTGCTGCTGCTTCCT+CGG | 0.398745 | 3.1:-81590082 | None:intergenic |
AACATCTTCTTTCTTTGGGT+TGG | 0.401046 | 3.1:+81589182 | MS.gene32877:CDS |
GGTTCCACTTTCAGCTGTAA+TGG | 0.401495 | 3.1:-81589721 | None:intergenic |
CCAGATAAAGCATCAATTGT+TGG | 0.408789 | 3.1:-81591119 | None:intergenic |
TGACAACAACATCAATATAT+TGG | 0.418067 | 3.1:+81589560 | MS.gene32877:CDS |
ATTAAATAGAGAAGGTATAA+GGG | 0.424847 | 3.1:+81590281 | MS.gene32877:CDS |
AGTCGCTCAATCGACTGAAA+TGG | 0.435511 | 3.1:-81589787 | None:intergenic |
CTTTGAATTGACTTCTAATG+AGG | 0.442824 | 3.1:+81590119 | MS.gene32877:CDS |
TAAACCGGAAGTTACTAATT+CGG | 0.448302 | 3.1:+81590233 | MS.gene32877:CDS |
TTTGGGTGTGTAAAGGCAAC+AGG | 0.448561 | 3.1:+81590846 | MS.gene32877:CDS |
AACAAGAATACTGTTATCAT+TGG | 0.451082 | 3.1:-81590796 | None:intergenic |
ACTGATACCTCGGATTCCTT+CGG | 0.455601 | 3.1:-81589742 | None:intergenic |
TGTTGTTGTCACTTCTTCCT+CGG | 0.457876 | 3.1:-81589548 | None:intergenic |
AGGAATGTGTCGTTTGTTGA+TGG | 0.460065 | 3.1:+81591328 | MS.gene32877:CDS |
AACTACAGCCACGCAGTGTA+AGG | 0.462994 | 3.1:-81591551 | None:intergenic |
GCTATTGTGGAAACCAGTTA+AGG | 0.464746 | 3.1:+81590959 | MS.gene32877:CDS |
TGTTGTCGCTGCTGCTTCAT+CGG | 0.468992 | 3.1:-81589818 | None:intergenic |
ACTAGTATCTTCTTGGAAGA+TGG | 0.470828 | 3.1:+81590501 | MS.gene32877:CDS |
GCATGTGATTCAATCTAAAC+CGG | 0.473942 | 3.1:+81590218 | MS.gene32877:CDS |
TACTACATTATCAACATCAA+TGG | 0.474099 | 3.1:+81590185 | MS.gene32877:CDS |
GTTATACTTCTCCTAACAAT+GGG | 0.474735 | 3.1:+81589245 | MS.gene32877:CDS |
TGATTTCGGTGGCTACCATA+AGG | 0.474912 | 3.1:+81591243 | MS.gene32877:CDS |
CTTGTGACCATAAATCCTTA+TGG | 0.478256 | 3.1:-81591258 | None:intergenic |
TTCTTCAATGCAACTCTCGC+AGG | 0.478869 | 3.1:-81589293 | None:intergenic |
GGAAGATGGAAGGTCGTTGT+TGG | 0.479840 | 3.1:+81590515 | MS.gene32877:CDS |
CCCACCGAATTAGTAACTTC+CGG | 0.484863 | 3.1:-81590237 | None:intergenic |
GCTGCTTCCTCGGATTCACT+TGG | 0.486702 | 3.1:-81590072 | None:intergenic |
CTGCAGTTGAAGGGTGTTTG+AGG | 0.486894 | 3.1:-81589327 | None:intergenic |
TAAAGAAAGTGCTGGTAGAA+AGG | 0.489417 | 3.1:+81589138 | MS.gene32877:CDS |
TGCTCTAGCTACTGCTTCCT+CGG | 0.490289 | 3.1:-81589416 | None:intergenic |
TCCTCTTGCTACTGATACCT+CGG | 0.491108 | 3.1:-81589752 | None:intergenic |
ATTTCACTTTGGGTGTGTAA+AGG | 0.492058 | 3.1:+81590839 | MS.gene32877:CDS |
TGTTGTTGCTGCTGCTTCCA+CGG | 0.492759 | 3.1:-81589617 | None:intergenic |
AGTTGCTCATTCGACTGTAA+TGG | 0.494258 | 3.1:-81589586 | None:intergenic |
TCGCTCTTTAGAAAGTAAAC+AGG | 0.494647 | 3.1:-81589515 | None:intergenic |
GAGAAACAATTGACTCGCTT+AGG | 0.495533 | 3.1:+81591359 | MS.gene32877:CDS |
AGTCGCTCTTTCGACTGTAA+TGG | 0.504195 | 3.1:-81589655 | None:intergenic |
AGTCGCTCTTTCGACTGTAA+TGG | 0.504195 | 3.1:-81589919 | None:intergenic |
ATCTCCATTACAGCTGAAAG+TGG | 0.509912 | 3.1:+81589717 | MS.gene32877:CDS |
CCATGTGTCTATAGCATCCT+CGG | 0.512950 | 3.1:-81591408 | None:intergenic |
TGTGAGCAGAAATTTCACTT+TGG | 0.513785 | 3.1:+81590828 | MS.gene32877:CDS |
ACTTCTTCCTCGGATTCTCT+CGG | 0.514079 | 3.1:-81589538 | None:intergenic |
CGTTATACTTCTCCTAACAA+TGG | 0.516763 | 3.1:+81589244 | MS.gene32877:CDS |
TGCAGTTGAAGGGTGTTTGA+GGG | 0.525454 | 3.1:-81589326 | None:intergenic |
AGTAACAATGTTGTTACAAG+CGG | 0.529847 | 3.1:+81590378 | MS.gene32877:CDS |
GGCCATTTAGGTTTCTTCAG+TGG | 0.532886 | 3.1:-81591530 | None:intergenic |
ACTGCTTCCTCAGATTCTCT+CGG | 0.534592 | 3.1:-81589874 | None:intergenic |
ACTGCTTCCTCGGATTCTCT+AGG | 0.535233 | 3.1:-81589406 | None:intergenic |
TGCGAGAGTTGCATTGAAGA+AGG | 0.537811 | 3.1:+81589295 | MS.gene32877:CDS |
GTTACTAATTCGGTGGGTAG+TGG | 0.540215 | 3.1:+81590243 | MS.gene32877:CDS |
CAGGCACTATGTTCATATCA+GGG | 0.543358 | 3.1:-81589060 | None:intergenic |
CTCATTAGAAGTCAATTCAA+AGG | 0.543407 | 3.1:-81590118 | None:intergenic |
TTACTGGTGCTGCAGTTGAA+GGG | 0.544490 | 3.1:-81589336 | None:intergenic |
AAGATACTAGTGGATGATGT+AGG | 0.545362 | 3.1:-81590489 | None:intergenic |
GTGGAAACCAGTTAAGGTTG+CGG | 0.547741 | 3.1:+81590965 | MS.gene32877:CDS |
ACAGCTTCTGGACAATGCTC+AGG | 0.548245 | 3.1:-81589079 | None:intergenic |
ATAGAGAAGGTATAAGGGAA+AGG | 0.549390 | 3.1:+81590286 | MS.gene32877:CDS |
CGGTGGGTAGTGGTAAAAGA+GGG | 0.549718 | 3.1:+81590253 | MS.gene32877:CDS |
GTCCAGAAGCTGTAAGAGAA+TGG | 0.553572 | 3.1:+81589089 | MS.gene32877:CDS |
TCGGTGGGTAGTGGTAAAAG+AGG | 0.553960 | 3.1:+81590252 | MS.gene32877:CDS |
GTCGTTGTTGGAATGTCAAA+GGG | 0.560420 | 3.1:+81590527 | MS.gene32877:CDS |
GGTCGTTGTTGGAATGTCAA+AGG | 0.562897 | 3.1:+81590526 | MS.gene32877:CDS |
GGGATGGTATTAAATAGAGA+AGG | 0.564639 | 3.1:+81590273 | MS.gene32877:CDS |
TTTAACAGAAATGAAACTAG+AGG | 0.570939 | 3.1:-81590151 | None:intergenic |
ACCGGAAGTTACTAATTCGG+TGG | 0.573180 | 3.1:+81590236 | MS.gene32877:CDS |
AGGTTGCGGATAATCTAACT+TGG | 0.576168 | 3.1:+81590979 | MS.gene32877:CDS |
GGACAGAACCAATCACCATC+CGG | 0.576643 | 3.1:-81590717 | None:intergenic |
AGAGAAACCGAGAGAATCTG+AGG | 0.577170 | 3.1:+81589867 | MS.gene32877:CDS |
GGGACTAATGTGCTCTGTCG+TGG | 0.584268 | 3.1:+81590354 | MS.gene32877:CDS |
CAAGATCGTAAAGAAAGTGC+TGG | 0.585561 | 3.1:+81589130 | MS.gene32877:CDS |
TATGTCTAAAGAAGCTATTG+TGG | 0.590646 | 3.1:+81590946 | MS.gene32877:CDS |
CATAAGGATTTATGGTCACA+AGG | 0.591190 | 3.1:+81591259 | MS.gene32877:CDS |
GATCTTGTAGTCCTGTTAAG+CGG | 0.594532 | 3.1:-81589114 | None:intergenic |
AAGAAAGAACATCGAGGACA+AGG | 0.599999 | 3.1:+81591308 | MS.gene32877:CDS |
AGAGCGACTGAGAGAATCTG+AGG | 0.606930 | 3.1:+81589669 | MS.gene32877:CDS |
GTATCTTCTTGGAAGATGGA+AGG | 0.608492 | 3.1:+81590505 | MS.gene32877:CDS |
CAACTGAGGTGGAATACAGA+AGG | 0.615320 | 3.1:-81590675 | None:intergenic |
CAAGATCTAAACAACTGAGG+TGG | 0.615408 | 3.1:-81590686 | None:intergenic |
GCTGGATTTAAGGATCATGC+TGG | 0.615585 | 3.1:+81590456 | MS.gene32877:CDS |
AAAGAAGCGTAAGTTAAATG+TGG | 0.618501 | 3.1:+81591067 | MS.gene32877:CDS |
GATCTTGATCGAGTTCCGGA+TGG | 0.620225 | 3.1:+81590702 | MS.gene32877:CDS |
ATCTTCCAAGAAGATACTAG+TGG | 0.622444 | 3.1:-81590499 | None:intergenic |
CCGGAAGTTACTAATTCGGT+GGG | 0.625187 | 3.1:+81590237 | MS.gene32877:CDS |
AGAGCGACCGAGAGAATCCG+AGG | 0.626644 | 3.1:+81589531 | MS.gene32877:CDS |
AGAGCGACTGAGAGAATGCG+AGG | 0.629289 | 3.1:+81589933 | MS.gene32877:CDS |
GAGAGTTGCATTGAAGAAGG+AGG | 0.635933 | 3.1:+81589298 | MS.gene32877:CDS |
AAAGCGACCTAGAGAATCCG+AGG | 0.636201 | 3.1:+81589399 | MS.gene32877:CDS |
AGAGTTGCATTGAAGAAGGA+GGG | 0.637310 | 3.1:+81589299 | MS.gene32877:CDS |
GTAACAATGTTGTTACAAGC+GGG | 0.638089 | 3.1:+81590379 | MS.gene32877:CDS |
TGAGCAACTGAGAGAATCCG+TGG | 0.638615 | 3.1:+81589600 | MS.gene32877:CDS |
CCGAGGATGCTATAGACACA+TGG | 0.641134 | 3.1:+81591408 | MS.gene32877:CDS |
AAAGCAACCAAGTGAATCCG+AGG | 0.642797 | 3.1:+81590065 | MS.gene32877:CDS |
ACAGCTGAAAGTGGAACCGA+AGG | 0.642895 | 3.1:+81589726 | MS.gene32877:CDS |
GGGTAGTGGTAAAAGAGGGA+TGG | 0.643359 | 3.1:+81590257 | MS.gene32877:CDS |
TCGCTTAGGAGTAGAAAGCA+TGG | 0.644182 | 3.1:+81591373 | MS.gene32877:CDS |
AGGATATGAATCGAGTCACA+TGG | 0.648464 | 3.1:+81590866 | MS.gene32877:CDS |
GGCACTATGTTCATATCAGG+GGG | 0.651855 | 3.1:-81589058 | None:intergenic |
AGGCACTATGTTCATATCAG+GGG | 0.652316 | 3.1:-81589059 | None:intergenic |
AGTGGAACCGAAGGAATCCG+AGG | 0.653108 | 3.1:+81589735 | MS.gene32877:CDS |
CTAAATGGCCTTACACTGCG+TGG | 0.653302 | 3.1:+81591543 | MS.gene32877:CDS |
GGAGCGACAGAGAAAATCTG+AGG | 0.653734 | 3.1:+81589465 | MS.gene32877:CDS |
AATGTGAATAGTGATGATGA+TGG | 0.655587 | 3.1:+81591014 | MS.gene32877:CDS |
TCCGAGGTATCAGTAGCAAG+AGG | 0.658945 | 3.1:+81589751 | MS.gene32877:CDS |
CATCGCCGATAAAAGAGCAA+CGG | 0.665684 | 3.1:+81589986 | MS.gene32877:CDS |
AATGGAGGAAGTGATTTCGG+TGG | 0.688617 | 3.1:+81591232 | MS.gene32877:CDS |
GATCAAGATCTAAACAACTG+AGG | 0.693653 | 3.1:-81590689 | None:intergenic |
TGTTGATAATGTAGTAACCG+TGG | 0.714599 | 3.1:-81590178 | None:intergenic |
GTCACCAAGAAAGAACATCG+AGG | 0.800027 | 3.1:+81591302 | MS.gene32877:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAATGTTAAAAAGAAGAAT+TGG | + | chr3.1:81590892-81590911 | MS.gene32877:CDS | 20.0% |
!! | TATTACTTTCTTAGAATTTC+AGG | + | chr3.1:81591487-81591506 | MS.gene32877:CDS | 20.0% |
!!! | ATTAAATAGAGAAGGTATAA+GGG | + | chr3.1:81590281-81590300 | MS.gene32877:CDS | 20.0% |
!!! | GTTGATAAAGAATAAAGTTT+TGG | + | chr3.1:81590326-81590345 | MS.gene32877:CDS | 20.0% |
!!! | TATTAAATAGAGAAGGTATA+AGG | + | chr3.1:81590280-81590299 | MS.gene32877:CDS | 20.0% |
! | AAAACAACATCTTCTTTCTT+TGG | + | chr3.1:81589177-81589196 | MS.gene32877:CDS | 25.0% |
! | AAACAACATCTTCTTTCTTT+GGG | + | chr3.1:81589178-81589197 | MS.gene32877:CDS | 25.0% |
! | AACAAGAATACTGTTATCAT+TGG | - | chr3.1:81590799-81590818 | None:intergenic | 25.0% |
! | CATTTCTGTTAAAAAAACCA+CGG | + | chr3.1:81590161-81590180 | MS.gene32877:CDS | 25.0% |
! | TACTACATTATCAACATCAA+TGG | + | chr3.1:81590185-81590204 | MS.gene32877:CDS | 25.0% |
! | TGACAACAACATCAATATAT+TGG | + | chr3.1:81589560-81589579 | MS.gene32877:CDS | 25.0% |
! | TTTAACAGAAATGAAACTAG+AGG | - | chr3.1:81590154-81590173 | None:intergenic | 25.0% |
!! | GTACATTCTTGTTTACATTT+AGG | - | chr3.1:81590771-81590790 | None:intergenic | 25.0% |
!! | TGGTTTCTATAATGTGATTT+TGG | + | chr3.1:81591205-81591224 | MS.gene32877:CDS | 25.0% |
!!! | AAGAATAAAGTTTTGGTTTC+AGG | + | chr3.1:81590333-81590352 | MS.gene32877:CDS | 25.0% |
!!! | AGAATAAAGTTTTGGTTTCA+GGG | + | chr3.1:81590334-81590353 | MS.gene32877:CDS | 25.0% |
!!! | AGGCTTTTTTAAGAGTAATA+TGG | - | chr3.1:81589276-81589295 | None:intergenic | 25.0% |
!!! | TAATGTGATTTTGGAGAAAA+TGG | + | chr3.1:81591214-81591233 | MS.gene32877:CDS | 25.0% |
AGTAACAATGTTGTTACAAG+CGG | + | chr3.1:81590378-81590397 | MS.gene32877:CDS | 30.0% | |
CTCATTAGAAGTCAATTCAA+AGG | - | chr3.1:81590121-81590140 | None:intergenic | 30.0% | |
CTTTGGTACATTGACAAAAA+TGG | + | chr3.1:81589208-81589227 | MS.gene32877:CDS | 30.0% | |
GATACTGTTTGTTCTATTTG+TGG | + | chr3.1:81590618-81590637 | MS.gene32877:CDS | 30.0% | |
GTTATACTTCTCCTAACAAT+GGG | + | chr3.1:81589245-81589264 | MS.gene32877:CDS | 30.0% | |
TAAACCGGAAGTTACTAATT+CGG | + | chr3.1:81590233-81590252 | MS.gene32877:CDS | 30.0% | |
TATGTCTAAAGAAGCTATTG+TGG | + | chr3.1:81590946-81590965 | MS.gene32877:CDS | 30.0% | |
! | AAAGAAGCGTAAGTTAAATG+TGG | + | chr3.1:81591067-81591086 | MS.gene32877:CDS | 30.0% |
! | AATGTGAATAGTGATGATGA+TGG | + | chr3.1:81591014-81591033 | MS.gene32877:CDS | 30.0% |
! | ATATGGTTTTTCCCATTGTT+AGG | - | chr3.1:81589259-81589278 | None:intergenic | 30.0% |
! | CATATTTTGCAACAACAAGT+TGG | - | chr3.1:81590741-81590760 | None:intergenic | 30.0% |
! | CTTTGAATTGACTTCTAATG+AGG | + | chr3.1:81590119-81590138 | MS.gene32877:CDS | 30.0% |
! | GTTTGTTCTATTTGTGGTTT+TGG | + | chr3.1:81590624-81590643 | MS.gene32877:CDS | 30.0% |
!! | AAAGGTATTCACTTGTTTCT+TGG | + | chr3.1:81590304-81590323 | MS.gene32877:CDS | 30.0% |
!!! | AATTTTAATTTCACTCTCGC+TGG | + | chr3.1:81590438-81590457 | MS.gene32877:CDS | 30.0% |
!!! | CAAAATCTTTTGGTTTTGAG+AGG | + | chr3.1:81591432-81591451 | MS.gene32877:CDS | 30.0% |
AACATCTTCTTTCTTTGGGT+TGG | + | chr3.1:81589182-81589201 | MS.gene32877:CDS | 35.0% | |
AACCACTGAAGAAACCTAAA+TGG | + | chr3.1:81591528-81591547 | MS.gene32877:CDS | 35.0% | |
ACATTGACAAAAATGGTAGG+AGG | + | chr3.1:81589215-81589234 | MS.gene32877:CDS | 35.0% | |
ACTAGTATCTTCTTGGAAGA+TGG | + | chr3.1:81590501-81590520 | MS.gene32877:CDS | 35.0% | |
ATCATCCACTAGTATCTTCT+TGG | + | chr3.1:81590494-81590513 | MS.gene32877:CDS | 35.0% | |
ATCTTCCAAGAAGATACTAG+TGG | - | chr3.1:81590502-81590521 | None:intergenic | 35.0% | |
ATTATTGTTGCTGCTGTTAC+TGG | - | chr3.1:81589355-81589374 | None:intergenic | 35.0% | |
ATTTCACTTTGGGTGTGTAA+AGG | + | chr3.1:81590839-81590858 | MS.gene32877:CDS | 35.0% | |
CATAAGGATTTATGGTCACA+AGG | + | chr3.1:81591259-81591278 | MS.gene32877:CDS | 35.0% | |
CATTGACAAAAATGGTAGGA+GGG | + | chr3.1:81589216-81589235 | MS.gene32877:CDS | 35.0% | |
CCAACAATTGATGCTTTATC+TGG | + | chr3.1:81591119-81591138 | MS.gene32877:CDS | 35.0% | |
CGTTATACTTCTCCTAACAA+TGG | + | chr3.1:81589244-81589263 | MS.gene32877:CDS | 35.0% | |
CTTGTGACCATAAATCCTTA+TGG | - | chr3.1:81591261-81591280 | None:intergenic | 35.0% | |
GAAAATGGAGGAAGTGATTT+CGG | + | chr3.1:81591229-81591248 | MS.gene32877:CDS | 35.0% | |
GATCAAGATCTAAACAACTG+AGG | - | chr3.1:81590692-81590711 | None:intergenic | 35.0% | |
GCATGTGATTCAATCTAAAC+CGG | + | chr3.1:81590218-81590237 | MS.gene32877:CDS | 35.0% | |
GGGATGGTATTAAATAGAGA+AGG | + | chr3.1:81590273-81590292 | MS.gene32877:CDS | 35.0% | |
GGTACATTGACAAAAATGGT+AGG | + | chr3.1:81589212-81589231 | MS.gene32877:CDS | 35.0% | |
GGTTTCTCTTTCAACTGTAA+TGG | - | chr3.1:81589856-81589875 | None:intergenic | 35.0% | |
GTAACAATGTTGTTACAAGC+GGG | + | chr3.1:81590379-81590398 | MS.gene32877:CDS | 35.0% | |
GTGAGCAGAAATTTCACTTT+GGG | + | chr3.1:81590829-81590848 | MS.gene32877:CDS | 35.0% | |
TAGGTTTCTTCAGTGGTTTA+AGG | - | chr3.1:81591526-81591545 | None:intergenic | 35.0% | |
TGTGAGCAGAAATTTCACTT+TGG | + | chr3.1:81590828-81590847 | MS.gene32877:CDS | 35.0% | |
TTTAGATCTTGATCGAGTTC+CGG | + | chr3.1:81590698-81590717 | MS.gene32877:CDS | 35.0% | |
! | AAGATACTAGTGGATGATGT+AGG | - | chr3.1:81590492-81590511 | None:intergenic | 35.0% |
! | ATAGAGAAGGTATAAGGGAA+AGG | + | chr3.1:81590286-81590305 | MS.gene32877:CDS | 35.0% |
! | CCAGATAAAGCATCAATTGT+TGG | - | chr3.1:81591122-81591141 | None:intergenic | 35.0% |
! | GACACATGGACAAAATCTTT+TGG | + | chr3.1:81591422-81591441 | MS.gene32877:CDS | 35.0% |
! | TCGCTCTTTAGAAAGTAAAC+AGG | - | chr3.1:81589518-81589537 | None:intergenic | 35.0% |
! | TTTTTCTCAACTACAGCTGA+AGG | + | chr3.1:81589444-81589463 | MS.gene32877:CDS | 35.0% |
!! | TAAAGAAAGTGCTGGTAGAA+AGG | + | chr3.1:81589138-81589157 | MS.gene32877:CDS | 35.0% |
!! | TGTGATTTTGGAGAAAATGG+AGG | + | chr3.1:81591217-81591236 | MS.gene32877:CDS | 35.0% |
!! | TGTTGATAATGTAGTAACCG+TGG | - | chr3.1:81590181-81590200 | None:intergenic | 35.0% |
!!! | TGTTCTATTTGTGGTTTTGG+AGG | + | chr3.1:81590627-81590646 | MS.gene32877:CDS | 35.0% |
AAGAAAGAACATCGAGGACA+AGG | + | chr3.1:81591308-81591327 | MS.gene32877:CDS | 40.0% | |
AGAGTTGCATTGAAGAAGGA+GGG | + | chr3.1:81589299-81589318 | MS.gene32877:CDS | 40.0% | |
AGATTATCCGCAACCTTAAC+TGG | - | chr3.1:81590975-81590994 | None:intergenic | 40.0% | |
AGGATATGAATCGAGTCACA+TGG | + | chr3.1:81590866-81590885 | MS.gene32877:CDS | 40.0% | |
AGGCACTATGTTCATATCAG+GGG | - | chr3.1:81589062-81589081 | None:intergenic | 40.0% | |
AGGTTGCGGATAATCTAACT+TGG | + | chr3.1:81590979-81590998 | MS.gene32877:CDS | 40.0% | |
AGTTGCTCATTCGACTGTAA+TGG | - | chr3.1:81589589-81589608 | None:intergenic | 40.0% | |
ATCTCCATTACAGCTGAAAG+TGG | + | chr3.1:81589717-81589736 | MS.gene32877:CDS | 40.0% | |
CAAGATCTAAACAACTGAGG+TGG | - | chr3.1:81590689-81590708 | None:intergenic | 40.0% | |
CAGGCACTATGTTCATATCA+GGG | - | chr3.1:81589063-81589082 | None:intergenic | 40.0% | |
GATCTTGTAGTCCTGTTAAG+CGG | - | chr3.1:81589117-81589136 | None:intergenic | 40.0% | |
GCTATTGTGGAAACCAGTTA+AGG | + | chr3.1:81590959-81590978 | MS.gene32877:CDS | 40.0% | |
GTATCTTCTTGGAAGATGGA+AGG | + | chr3.1:81590505-81590524 | MS.gene32877:CDS | 40.0% | |
GTCGTTGTTGGAATGTCAAA+GGG | + | chr3.1:81590527-81590546 | MS.gene32877:CDS | 40.0% | |
GTGGCTACCATAAGGATTTA+TGG | + | chr3.1:81591251-81591270 | MS.gene32877:CDS | 40.0% | |
TCAGGCACTATGTTCATATC+AGG | - | chr3.1:81589064-81589083 | None:intergenic | 40.0% | |
TTGTCCTCGATGTTCTTTCT+TGG | - | chr3.1:81591309-81591328 | None:intergenic | 40.0% | |
TTTCACTCTCGCTGGATTTA+AGG | + | chr3.1:81590446-81590465 | MS.gene32877:CDS | 40.0% | |
! | CAAGATCGTAAAGAAAGTGC+TGG | + | chr3.1:81589130-81589149 | MS.gene32877:CDS | 40.0% |
! | CATAAGCGCTTGAACTTTTG+TGG | + | chr3.1:81591185-81591204 | MS.gene32877:CDS | 40.0% |
! | TCTCTCCGTTGCTCTTTTAT+CGG | - | chr3.1:81589994-81590013 | None:intergenic | 40.0% |
! | TGTTGTTGTCACTTCTTCCT+CGG | - | chr3.1:81589551-81589570 | None:intergenic | 40.0% |
!! | AGCGGGAGTATATTTTGTGA+TGG | + | chr3.1:81590396-81590415 | MS.gene32877:CDS | 40.0% |
!! | AGGAATGTGTCGTTTGTTGA+TGG | + | chr3.1:81591328-81591347 | MS.gene32877:CDS | 40.0% |
!! | GAGAAACAATTGACTCGCTT+AGG | + | chr3.1:81591359-81591378 | MS.gene32877:CDS | 40.0% |
!! | TTTCTTTGGGTTGGAAGCTT+TGG | + | chr3.1:81589191-81589210 | MS.gene32877:CDS | 40.0% |
!!! | GGTTGCTTTTTCGACTGTAA+TGG | - | chr3.1:81590054-81590073 | None:intergenic | 40.0% |
!!! | TTTGGTTTTGAGAGGATGAC+AGG | + | chr3.1:81591440-81591459 | MS.gene32877:CDS | 40.0% |
AAAGCAACCAAGTGAATCCG+AGG | + | chr3.1:81590065-81590084 | MS.gene32877:CDS | 45.0% | |
AATGGAGGAAGTGATTTCGG+TGG | + | chr3.1:81591232-81591251 | MS.gene32877:CDS | 45.0% | |
ACCGGAAGTTACTAATTCGG+TGG | + | chr3.1:81590236-81590255 | MS.gene32877:CDS | 45.0% | |
ACTGATACCTCGGATTCCTT+CGG | - | chr3.1:81589745-81589764 | None:intergenic | 45.0% | |
ACTGCTTCCTCAGATTCTCT+CGG | - | chr3.1:81589877-81589896 | None:intergenic | 45.0% | |
ACTTCTTCCTCGGATTCTCT+CGG | - | chr3.1:81589541-81589560 | None:intergenic | 45.0% | |
AGAGAAACCGAGAGAATCTG+AGG | + | chr3.1:81589867-81589886 | MS.gene32877:CDS | 45.0% | |
AGTCGCTCAATCGACTGAAA+TGG | - | chr3.1:81589790-81589809 | None:intergenic | 45.0% | |
AGTCGCTCTTTCGACTGTAA+TGG | - | chr3.1:81589658-81589677 | None:intergenic | 45.0% | |
CAACTGAGGTGGAATACAGA+AGG | - | chr3.1:81590678-81590697 | None:intergenic | 45.0% | |
CACCATTCTCTTACAGCTTC+TGG | - | chr3.1:81589094-81589113 | None:intergenic | 45.0% | |
CATCGCCGATAAAAGAGCAA+CGG | + | chr3.1:81589986-81590005 | MS.gene32877:CDS | 45.0% | |
CCATGTGTCTATAGCATCCT+CGG | - | chr3.1:81591411-81591430 | None:intergenic | 45.0% | |
CCCACCGAATTAGTAACTTC+CGG | - | chr3.1:81590240-81590259 | None:intergenic | 45.0% | |
CCGGAAGTTACTAATTCGGT+GGG | + | chr3.1:81590237-81590256 | MS.gene32877:CDS | 45.0% | |
GAGAGTTGCATTGAAGAAGG+AGG | + | chr3.1:81589298-81589317 | MS.gene32877:CDS | 45.0% | |
GCTGGATTTAAGGATCATGC+TGG | + | chr3.1:81590456-81590475 | MS.gene32877:CDS | 45.0% | |
GGCACTATGTTCATATCAGG+GGG | - | chr3.1:81589061-81589080 | None:intergenic | 45.0% | |
GGTCGTTGTTGGAATGTCAA+AGG | + | chr3.1:81590526-81590545 | MS.gene32877:CDS | 45.0% | |
GGTTCCACTTTCAGCTGTAA+TGG | - | chr3.1:81589724-81589743 | None:intergenic | 45.0% | |
GTCACCAAGAAAGAACATCG+AGG | + | chr3.1:81591302-81591321 | MS.gene32877:CDS | 45.0% | |
GTCCAGAAGCTGTAAGAGAA+TGG | + | chr3.1:81589089-81589108 | MS.gene32877:CDS | 45.0% | |
GTGGAAACCAGTTAAGGTTG+CGG | + | chr3.1:81590965-81590984 | MS.gene32877:CDS | 45.0% | |
TCCTCTTGCTACTGATACCT+CGG | - | chr3.1:81589755-81589774 | None:intergenic | 45.0% | |
TCGCTTAGGAGTAGAAAGCA+TGG | + | chr3.1:81591373-81591392 | MS.gene32877:CDS | 45.0% | |
TGATTTCGGTGGCTACCATA+AGG | + | chr3.1:81591243-81591262 | MS.gene32877:CDS | 45.0% | |
TGCGAGAGTTGCATTGAAGA+AGG | + | chr3.1:81589295-81589314 | MS.gene32877:CDS | 45.0% | |
TTCTTCAATGCAACTCTCGC+AGG | - | chr3.1:81589296-81589315 | None:intergenic | 45.0% | |
TTTGGGTGTGTAAAGGCAAC+AGG | + | chr3.1:81590846-81590865 | MS.gene32877:CDS | 45.0% | |
! | GCAATATAGTTTGCGCGAAC+AGG | + | chr3.1:81590919-81590938 | MS.gene32877:CDS | 45.0% |
! | GGCCATTTAGGTTTCTTCAG+TGG | - | chr3.1:81591533-81591552 | None:intergenic | 45.0% |
! | GGTTGCTGAGATAGTTTTCG+TGG | + | chr3.1:81591280-81591299 | MS.gene32877:CDS | 45.0% |
! | GTTACTAATTCGGTGGGTAG+TGG | + | chr3.1:81590243-81590262 | MS.gene32877:CDS | 45.0% |
!! | CATGGTTTTGCATTCATCCG+AGG | + | chr3.1:81591391-81591410 | MS.gene32877:CDS | 45.0% |
!! | TGCAGTTGAAGGGTGTTTGA+GGG | - | chr3.1:81589329-81589348 | None:intergenic | 45.0% |
!! | TTACTGGTGCTGCAGTTGAA+GGG | - | chr3.1:81589339-81589358 | None:intergenic | 45.0% |
AAAGCGACCTAGAGAATCCG+AGG | + | chr3.1:81589399-81589418 | MS.gene32877:CDS | 50.0% | |
ACAGCTGAAAGTGGAACCGA+AGG | + | chr3.1:81589726-81589745 | MS.gene32877:CDS | 50.0% | |
ACAGCTTCTGGACAATGCTC+AGG | - | chr3.1:81589082-81589101 | None:intergenic | 50.0% | |
ACTGCTTCCTCGGATTCTCT+AGG | - | chr3.1:81589409-81589428 | None:intergenic | 50.0% | |
AGAGCGACTGAGAGAATCTG+AGG | + | chr3.1:81589669-81589688 | MS.gene32877:CDS | 50.0% | |
ATCGAGTTCCGGATGGTGAT+TGG | + | chr3.1:81590709-81590728 | MS.gene32877:CDS | 50.0% | |
CACGCAGTGTAAGGCCATTT+AGG | - | chr3.1:81591545-81591564 | None:intergenic | 50.0% | |
CCGAGGATGCTATAGACACA+TGG | + | chr3.1:81591408-81591427 | MS.gene32877:CDS | 50.0% | |
GATCTTGATCGAGTTCCGGA+TGG | + | chr3.1:81590702-81590721 | MS.gene32877:CDS | 50.0% | |
GGAAGATGGAAGGTCGTTGT+TGG | + | chr3.1:81590515-81590534 | MS.gene32877:CDS | 50.0% | |
GGACAGAACCAATCACCATC+CGG | - | chr3.1:81590720-81590739 | None:intergenic | 50.0% | |
GGAGCGACAGAGAAAATCTG+AGG | + | chr3.1:81589465-81589484 | MS.gene32877:CDS | 50.0% | |
TGAGCAACTGAGAGAATCCG+TGG | + | chr3.1:81589600-81589619 | MS.gene32877:CDS | 50.0% | |
TGCTCTAGCTACTGCTTCCT+CGG | - | chr3.1:81589419-81589438 | None:intergenic | 50.0% | |
! | CGGTGGGTAGTGGTAAAAGA+GGG | + | chr3.1:81590253-81590272 | MS.gene32877:CDS | 50.0% |
! | CGTTGCTCTTTTATCGGCGA+TGG | - | chr3.1:81589988-81590007 | None:intergenic | 50.0% |
! | CTAAATGGCCTTACACTGCG+TGG | + | chr3.1:81591543-81591562 | MS.gene32877:CDS | 50.0% |
! | GGGTAGTGGTAAAAGAGGGA+TGG | + | chr3.1:81590257-81590276 | MS.gene32877:CDS | 50.0% |
! | TCCGAGGTATCAGTAGCAAG+AGG | + | chr3.1:81589751-81589770 | MS.gene32877:CDS | 50.0% |
! | TCGGTGGGTAGTGGTAAAAG+AGG | + | chr3.1:81590252-81590271 | MS.gene32877:CDS | 50.0% |
! | TGCTATTGCTGCTGCTTCCT+CGG | - | chr3.1:81590085-81590104 | None:intergenic | 50.0% |
! | TGTTGTCGCTGCTGCTTCAT+CGG | - | chr3.1:81589821-81589840 | None:intergenic | 50.0% |
! | TGTTGTTGCTGCTGCTTCCA+CGG | - | chr3.1:81589620-81589639 | None:intergenic | 50.0% |
!! | AGAGAATGGTGCCGCTTAAC+AGG | + | chr3.1:81589103-81589122 | MS.gene32877:CDS | 50.0% |
!! | CTGCAGTTGAAGGGTGTTTG+AGG | - | chr3.1:81589330-81589349 | None:intergenic | 50.0% |
!! | GTTACTGGTGCTGCAGTTGA+AGG | - | chr3.1:81589340-81589359 | None:intergenic | 50.0% |
!!! | GGTCGCTTTTTCGACTGTGA+TGG | - | chr3.1:81589388-81589407 | None:intergenic | 50.0% |
AGAGCGACTGAGAGAATGCG+AGG | + | chr3.1:81589933-81589952 | MS.gene32877:CDS | 55.0% | |
AGTGGAACCGAAGGAATCCG+AGG | + | chr3.1:81589735-81589754 | MS.gene32877:CDS | 55.0% | |
GCTGCTTCCTCGGATTCACT+TGG | - | chr3.1:81590075-81590094 | None:intergenic | 55.0% | |
GGGACTAATGTGCTCTGTCG+TGG | + | chr3.1:81590354-81590373 | MS.gene32877:CDS | 55.0% | |
AGAGCGACCGAGAGAATCCG+AGG | + | chr3.1:81589531-81589550 | MS.gene32877:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 81589040 | 81591571 | 81589040 | ID=MS.gene32877 |
chr3.1 | mRNA | 81589040 | 81591571 | 81589040 | ID=MS.gene32877.t1;Parent=MS.gene32877 |
chr3.1 | exon | 81589040 | 81591571 | 81589040 | ID=MS.gene32877.t1.exon1;Parent=MS.gene32877.t1 |
chr3.1 | CDS | 81589040 | 81591571 | 81589040 | ID=cds.MS.gene32877.t1;Parent=MS.gene32877.t1 |
Gene Sequence |
Protein sequence |