AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33525

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33525.t1 MTR_0091s0080 33.883 546 245 7 80 610 28 472 2.07e-106 330
MS.gene33525.t1 MTR_0091s0090 42.512 207 118 1 396 602 4 209 8.77e-55 187
MS.gene33525.t1 MTR_0091s0090 36.946 203 125 1 128 327 3 205 8.38e-40 147
MS.gene33525.t1 MTR_1g052720 34.470 264 146 6 80 320 36 295 1.93e-48 171
MS.gene33525.t1 MTR_1g052720 34.432 273 161 4 345 603 34 302 3.24e-47 168
MS.gene33525.t1 MTR_6g465600 36.694 248 142 4 337 570 28 274 4.85e-44 160
MS.gene33525.t1 MTR_6g465600 35.565 239 139 4 80 304 39 276 4.85e-44 160
MS.gene33525.t1 MTR_0246s0040 34.091 264 156 7 354 616 72 318 2.33e-34 133
MS.gene33525.t1 MTR_0246s0040 33.028 218 133 3 87 304 72 276 1.54e-32 128
MS.gene33525.t1 MTR_1g105780 29.437 231 150 2 86 304 40 269 2.42e-29 117
MS.gene33525.t1 MTR_1g105780 29.302 215 140 2 351 554 38 251 6.11e-26 108
MS.gene33525.t1 MTR_7g110090 28.632 234 154 2 86 307 39 271 5.88e-29 116
MS.gene33525.t1 MTR_7g110090 27.490 251 165 5 337 573 22 269 6.42e-24 102
MS.gene33525.t1 MTR_1g105765 29.004 231 151 2 86 304 40 269 6.95e-29 116
MS.gene33525.t1 MTR_1g105765 29.767 215 139 2 351 554 38 251 3.68e-26 108
MS.gene33525.t1 MTR_3g070250 29.707 239 150 2 86 307 44 281 1.31e-26 110
MS.gene33525.t1 MTR_3g070250 28.512 242 151 6 336 558 26 264 7.09e-20 90.5
MS.gene33525.t1 MTR_4g032560 29.060 234 153 2 86 307 68 300 1.02e-25 108
MS.gene33525.t1 MTR_4g032560 27.881 269 180 5 314 569 28 295 1.39e-21 96.3
MS.gene33525.t1 MTR_1g084880 29.289 239 151 2 86 307 39 276 1.03e-25 107
MS.gene33525.t1 MTR_1g084880 28.384 229 143 4 351 561 37 262 1.36e-18 86.7
MS.gene33525.t1 MTR_3g048970 28.870 239 152 2 86 307 39 276 3.83e-25 105
MS.gene33525.t1 MTR_3g048970 27.948 229 144 4 351 561 37 262 1.68e-18 86.7
MS.gene33525.t1 MTR_4g032580 28.632 234 154 2 86 307 68 300 4.42e-25 106
MS.gene33525.t1 MTR_4g032580 27.881 269 180 5 314 569 28 295 1.23e-21 96.3
MS.gene33525.t1 MTR_3g085990 29.730 222 130 4 86 307 40 235 8.25e-25 103
MS.gene33525.t1 MTR_3g085990 26.316 228 140 6 335 561 21 221 2.95e-15 76.3
MS.gene33525.t1 MTR_1g023840 40.594 101 60 0 471 571 10 110 8.01e-22 92.4
MS.gene33525.t1 MTR_1g023840 44.681 94 52 0 206 299 13 106 1.30e-21 91.7
MS.gene33525.t1 MTR_7g050355 26.022 269 133 3 337 604 28 231 3.35e-21 98.2
MS.gene33525.t1 MTR_1g047540 26.840 231 147 5 86 307 39 256 6.54e-19 90.5
MS.gene33525.t1 MTR_1g047540 27.530 247 155 8 337 573 22 254 1.11e-16 83.6
MS.gene33525.t1 MTR_4g062370 27.165 254 163 6 310 551 8 251 6.95e-19 91.3
MS.gene33525.t1 MTR_4g062370 27.854 219 141 4 86 290 43 258 2.62e-18 89.4
MS.gene33525.t1 MTR_2g100360 25.792 221 142 3 85 286 38 255 4.21e-18 85.1
MS.gene33525.t1 MTR_2g100360 25.221 226 152 3 351 560 37 261 4.81e-16 79.3
MS.gene33525.t1 MTR_5g066660 26.210 248 162 6 87 332 40 268 5.66e-18 85.1
MS.gene33525.t1 MTR_5g066660 26.484 219 140 5 351 567 37 236 1.46e-12 68.9
MS.gene33525.t1 MTR_2g038740 28.272 191 120 1 86 259 39 229 1.64e-17 87.0
MS.gene33525.t1 MTR_2g038740 27.413 259 160 5 351 582 37 294 2.68e-17 86.3
MS.gene33525.t1 MTR_8g064960 41.892 74 42 1 226 299 27 99 2.48e-17 78.6
MS.gene33525.t1 MTR_8g064930 67.347 49 16 0 359 407 2 50 4.08e-17 75.9
MS.gene33525.t1 MTR_3g452180 26.374 182 121 2 138 307 7 187 8.14e-17 79.3
MS.gene33525.t1 MTR_3g452180 25.824 182 119 4 405 573 7 185 8.57e-14 70.9
MS.gene33525.t1 MTR_4g117740 28.571 154 93 2 97 250 61 197 1.48e-16 79.0
MS.gene33525.t1 MTR_4g117740 27.815 151 91 2 368 518 65 197 1.50e-13 70.1
MS.gene33525.t1 MTR_1g087870 25.000 240 153 6 101 319 2 235 5.98e-16 78.6
MS.gene33525.t1 MTR_1g087870 25.114 219 147 4 368 570 2 219 8.39e-16 78.2
MS.gene33525.t1 MTR_6g033605 37.349 83 51 1 226 307 30 112 1.91e-14 70.5
MS.gene33525.t1 MTR_6g033605 32.927 82 54 1 494 574 30 111 1.50e-12 65.1
MS.gene33525.t1 MTR_0521s0010 26.519 181 102 2 87 250 34 200 2.02e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 164 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTGTGGCAAGGATTTC+TGG 0.139608 8.2:+3454211 None:intergenic
AAACTGGACCGTCGTGATTT+TGG 0.142859 8.2:-3455911 MS.gene33525:CDS
ACAATATTAGGAGGCATAAA+AGG 0.192691 8.2:+3456486 None:intergenic
CAATCCAGCCTTGTTTCTTA+TGG 0.243933 8.2:+3454494 None:intergenic
CGGTCCAGTTTGGATATTAT+TGG 0.264347 8.2:+3455923 None:intergenic
ATCCATGGGTGCAGTGTATT+GGG 0.290852 8.2:+3453986 None:intergenic
CATTAGACATTGCCGTGGTT+TGG 0.309583 8.2:-3455715 MS.gene33525:intron
AAGGAGCAGATCACAATATT+AGG 0.318102 8.2:+3456474 None:intergenic
CTCATCATTGCCATCTCACT+TGG 0.320277 8.2:+3456357 None:intergenic
TGTCACGCTGAATGAACTTT+AGG 0.324413 8.2:+3455614 None:intergenic
ACAAATGCAGATTTGATTAG+AGG 0.328195 8.2:-3455448 MS.gene33525:CDS
ATTAGACATTGCCGTGGTTT+GGG 0.336423 8.2:-3455714 MS.gene33525:intron
CCGAGGTTCATTACTTCATC+AGG 0.337428 8.2:-3454432 MS.gene33525:CDS
GATATATCGGATAATGGATA+TGG 0.364913 8.2:+3454465 None:intergenic
CCTACCACACTTACGATTGT+TGG 0.366401 8.2:-3454189 MS.gene33525:CDS
ACCTCTGCGATGTGCAAATC+AGG 0.368835 8.2:+3454082 None:intergenic
ATCGTCAAGGTCATAAGATT+TGG 0.374229 8.2:+3455992 None:intergenic
ACATCGCAGAGGTTGGTTGC+AGG 0.375369 8.2:-3454072 MS.gene33525:CDS
ACAACAATGATATTGTTGTT+TGG 0.386359 8.2:+3454645 None:intergenic
ACCTCAATCTCATTGTTCAT+TGG 0.386489 8.2:+3456124 None:intergenic
GATATTTATAACATTGTAGA+TGG 0.391221 8.2:-3454564 MS.gene33525:CDS
GACTTCGTCTGATGTCCTCT+CGG 0.399084 8.2:-3454364 MS.gene33525:CDS
TATCCATGGGTGCAGTGTAT+TGG 0.399336 8.2:+3453985 None:intergenic
ACTTCAGACAAGGCTGGTCT+AGG 0.399428 8.2:-3454593 MS.gene33525:CDS
GCAAGGGATATATCGGATAA+TGG 0.403725 8.2:+3454459 None:intergenic
AAAATCACGACGGTCCAGTT+TGG 0.405460 8.2:+3455913 None:intergenic
ATGCTATGATTGGTGGTGAT+TGG 0.409098 8.2:-3454107 MS.gene33525:CDS
TACTCCAATAATATCCAAAC+TGG 0.412151 8.2:-3455927 MS.gene33525:CDS
GGATGTTAACTCAGGATGTT+TGG 0.412783 8.2:-3455837 MS.gene33525:intron
TGCATGCTGCAAATCAGCTT+TGG 0.415627 8.2:+3456426 None:intergenic
CATAAGAAACAAGGCTGGAT+TGG 0.419848 8.2:-3454493 MS.gene33525:CDS
AACCAGACTTTGCCGTGGTA+TGG 0.440028 8.2:-3454240 MS.gene33525:intron
CACTATTGAATTGACTTACT+CGG 0.440432 8.2:-3455858 MS.gene33525:CDS
TTGATTACGTTGGATTTGCC+TGG 0.442541 8.2:-3455645 MS.gene33525:CDS
GTGTACAATTGAAGGTGATT+GGG 0.443885 8.2:-3455581 MS.gene33525:CDS
AAACCTATGGTCAGCGGCAG+TGG 0.455398 8.2:-3453955 MS.gene33525:CDS
GAACTTTAGGTCACATCTCC+AGG 0.457339 8.2:+3455627 None:intergenic
ACTCCTATGTGTACAATTGA+AGG 0.457401 8.2:-3455589 MS.gene33525:CDS
CGGCAACGCAAGGGATATAT+CGG 0.461190 8.2:+3454452 None:intergenic
CAGACATAGTGTCAAATTCA+AGG 0.463743 8.2:+3456325 None:intergenic
GACAAAGATAACACAGTCCT+TGG 0.465488 8.2:-3454021 MS.gene33525:CDS
TGTGTACAATTGAAGGTGAT+TGG 0.473160 8.2:-3455582 MS.gene33525:CDS
AGGCTTCTTGTTACTCTGAT+GGG 0.475086 8.2:+3456518 None:intergenic
TCATCATTGCCATCTCACTT+GGG 0.476104 8.2:+3456358 None:intergenic
TTCGATAGACCTTGCGGTCA+CGG 0.478744 8.2:-3455521 MS.gene33525:CDS
CTGTGCGAAGGGACCTGTCT+CGG 0.479542 8.2:-3455250 MS.gene33525:CDS
AAGGCTTCTTGTTACTCTGA+TGG 0.487578 8.2:+3456517 None:intergenic
TAGGTTTCACATAGTATCCA+TGG 0.490660 8.2:+3453971 None:intergenic
ATGGTCATGAGTAGTAGATT+AGG 0.500878 8.2:+3454513 None:intergenic
TGGGTCTATCTGAAATATGC+GGG 0.502250 8.2:-3454537 MS.gene33525:CDS
TTGGTCCGAACGGCTGTACA+TGG 0.502745 8.2:-3454170 MS.gene33525:CDS
CATCTCACCATGTCTGACTT+AGG 0.502842 8.2:-3457235 None:intergenic
ACAGTGAGGTCCGTATTTAT+CGG 0.505137 8.2:+3455670 None:intergenic
GAAGGGACCTGTCTCGGTTG+AGG 0.505460 8.2:-3455244 MS.gene33525:CDS
GCTTCTATATTCTGTTTCCA+AGG 0.505945 8.2:-3455394 MS.gene33525:intron
TCTGCATTTGTAGACGGCAC+AGG 0.506847 8.2:+3455460 None:intergenic
GACTTCTACAACATTGAGCT+TGG 0.507615 8.2:-3456043 MS.gene33525:CDS
CCTTGCTTGAGTGTGGTCGT+TGG 0.508319 8.2:-3456455 MS.gene33525:CDS
TCACCACCAATCATAGCATA+AGG 0.511917 8.2:+3454111 None:intergenic
ACTTCGTCTGATGTCCTCTC+GGG 0.511997 8.2:-3454363 MS.gene33525:CDS
CATCTCCATGTACAGCCGTT+CGG 0.512529 8.2:+3454165 None:intergenic
GAGTATGCTGGAACAGATGT+CGG 0.514049 8.2:-3453884 MS.gene33525:CDS
AATATGCCTTATGCTATGAT+TGG 0.515256 8.2:-3454117 MS.gene33525:CDS
TCCAATGAACAATGAGATTG+AGG 0.518221 8.2:-3456125 MS.gene33525:CDS
AGCTTTATATGAGGAAAGGT+TGG 0.518511 8.2:-3456078 MS.gene33525:CDS
GATAAGTCCTCAACCGAGAC+AGG 0.525131 8.2:+3455237 None:intergenic
CAATATTAGGAGGCATAAAA+GGG 0.527022 8.2:+3456487 None:intergenic
CGACCACTGCCGCTGACCAT+AGG 0.527761 8.2:+3453952 None:intergenic
ACCCCAATACACTGCACCCA+TGG 0.533195 8.2:-3453988 MS.gene33525:CDS
TGCACAAGGAATGCTGTCAT+TGG 0.536531 8.2:-3457179 MS.gene33525:CDS
CAGTGGTCGATATGTGTACC+AGG 0.539166 8.2:-3453938 MS.gene33525:CDS
ATTATTGGAGTAGTGTGAGC+AGG 0.541688 8.2:+3455938 None:intergenic
TAATGAACCTCGGCAACGCA+AGG 0.541750 8.2:+3454442 None:intergenic
TGATGTCCTCTCGGGCACTT+TGG 0.543138 8.2:-3454355 MS.gene33525:intron
TTGCAAGGCGAAGAGTATGC+TGG 0.545573 8.2:-3453896 MS.gene33525:CDS
ATAACATTGTAGATGGTGCA+TGG 0.547247 8.2:-3454557 MS.gene33525:CDS
CGAGGTTCATTACTTCATCA+GGG 0.547766 8.2:-3454431 MS.gene33525:CDS
TCACCATGTCTGACTTAGGT+GGG 0.551890 8.2:-3457231 None:intergenic
CATATTATTTGCAACAGCGA+AGG 0.553325 8.2:+3454134 None:intergenic
CTTCAGACAAGGCTGGTCTA+GGG 0.553757 8.2:-3454592 MS.gene33525:CDS
CAAGGAATGCTGTCATTGGC+AGG 0.555729 8.2:-3457175 MS.gene33525:intron
CGTGTTACCTCCGATAAATA+CGG 0.556373 8.2:-3455680 MS.gene33525:CDS
AACGACCTTCGACAAACCTA+CGG 0.556786 8.2:+3455542 None:intergenic
AGTATGCTGGAACAGATGTC+GGG 0.557360 8.2:-3453883 MS.gene33525:CDS
CTTACGATTGTTGGTCCGAA+CGG 0.558198 8.2:-3454180 MS.gene33525:CDS
CTCACTGTCATTGATTACGT+TGG 0.558362 8.2:-3455655 MS.gene33525:CDS
TATATGAGGAAAGGTTGGTA+TGG 0.559929 8.2:-3456073 MS.gene33525:CDS
GATTTGCACATCGCAGAGGT+TGG 0.560790 8.2:-3454079 MS.gene33525:CDS
GGACTGTGTTATCTTTGTCA+TGG 0.561082 8.2:+3454025 None:intergenic
TCTTCTCCTCCGTGACCGCA+AGG 0.561112 8.2:+3455512 None:intergenic
TGGATACTATGTGAAACCTA+TGG 0.563204 8.2:-3453968 MS.gene33525:CDS
TCAGACTGCAATATGAACCT+TGG 0.563823 8.2:+3455418 None:intergenic
TGCAGTGTATTGGGGTATGT+CGG 0.565836 8.2:+3453995 None:intergenic
CTGCATTTGTAGACGGCACA+GGG 0.566431 8.2:+3455461 None:intergenic
TGATTAGAGGCATTGATCCA+AGG 0.567311 8.2:-3455435 MS.gene33525:CDS
ATATATCCCTTGCGTTGCCG+AGG 0.568869 8.2:-3454449 MS.gene33525:CDS
TGTGGTAGGTTTCTGTGGCA+AGG 0.569531 8.2:+3454203 None:intergenic
GACAAGCTTTATATGAGGAA+AGG 0.570103 8.2:-3456082 MS.gene33525:CDS
ATCTCACTTGGGGTATACGT+TGG 0.570410 8.2:+3456369 None:intergenic
TAACATTGTAGATGGTGCAT+GGG 0.570614 8.2:-3454556 MS.gene33525:CDS
CTCACCATGTCTGACTTAGG+TGG 0.572352 8.2:-3457232 None:intergenic
ACTTACTCGGATGTTAACTC+AGG 0.572912 8.2:-3455845 MS.gene33525:CDS
GAAAGGTTGGTATGGACTGA+AGG 0.575278 8.2:-3456065 MS.gene33525:CDS
GAGGCGACAAGCTTTATATG+AGG 0.576586 8.2:-3456087 MS.gene33525:CDS
ACAAGGCTGGTCTAGGGTGA+AGG 0.576887 8.2:-3454586 MS.gene33525:CDS
CATCATTGCCATCTCACTTG+GGG 0.579124 8.2:+3456359 None:intergenic
AACGTATACCCCAAGTGAGA+TGG 0.579805 8.2:-3456367 MS.gene33525:CDS
AAATCTGTTGTTGATCGTCA+AGG 0.579813 8.2:+3455979 None:intergenic
ACAACATTGAGCTTGGTGCA+TGG 0.580204 8.2:-3456036 MS.gene33525:CDS
CCAACAATCGTAAGTGTGGT+AGG 0.580385 8.2:+3454189 None:intergenic
CGAGACAGGTCCCTTCGCAC+AGG 0.583465 8.2:+3455251 None:intergenic
ACGACCTTCGACAAACCTAC+GGG 0.584033 8.2:+3455543 None:intergenic
AGGTCTACTTCAGACAAGGC+TGG 0.585540 8.2:-3454599 MS.gene33525:CDS
ATCTGCTCCTTGCTTGAGTG+TGG 0.585624 8.2:-3456462 MS.gene33525:CDS
ATCAAATCTGCATTTGTAGA+CGG 0.590289 8.2:+3455454 None:intergenic
GCATGAAAATGTTGTAGGTG+GGG 0.592686 8.2:-3456406 MS.gene33525:CDS
TCACTATCTCAAATATTGCA+AGG 0.596203 8.2:-3453911 MS.gene33525:CDS
TGCATGAAAATGTTGTAGGT+GGG 0.596497 8.2:-3456407 MS.gene33525:CDS
ATGACCATAAGAAACAAGGC+TGG 0.597597 8.2:-3454498 MS.gene33525:CDS
CGACCTCGATCCTGTGCGAA+GGG 0.601460 8.2:-3455261 MS.gene33525:CDS
ATGCCTTATGCTATGATTGG+TGG 0.601798 8.2:-3454114 MS.gene33525:CDS
TTGGGGTATGTCGGAAACCA+AGG 0.606539 8.2:+3454004 None:intergenic
AATGAACCTCGGCAACGCAA+GGG 0.607154 8.2:+3454443 None:intergenic
AACGCTTTGGATGCTGCACA+AGG 0.608033 8.2:-3457193 MS.gene33525:CDS
AGCATGCATGAAAATGTTGT+AGG 0.609002 8.2:-3456411 MS.gene33525:CDS
TGTACAATTGAAGGTGATTG+GGG 0.612279 8.2:-3455580 MS.gene33525:CDS
GTAAGTGTGGTAGGTTTCTG+TGG 0.617237 8.2:+3454198 None:intergenic
CCAACGACCACACTCAAGCA+AGG 0.618711 8.2:+3456455 None:intergenic
GAGCAGATCACAATATTAGG+AGG 0.621127 8.2:+3456477 None:intergenic
AGGTTTCACATAGTATCCAT+GGG 0.622147 8.2:+3453972 None:intergenic
CAACAGCGAACTTAACTGCA+TGG 0.624703 8.2:+3454049 None:intergenic
CATGAAAATGTTGTAGGTGG+GGG 0.624750 8.2:-3456405 MS.gene33525:CDS
TCCATGGGTGCAGTGTATTG+GGG 0.627336 8.2:+3453987 None:intergenic
ATGCATGAAAATGTTGTAGG+TGG 0.627822 8.2:-3456408 MS.gene33525:CDS
ACCTGATTTGCACATCGCAG+AGG 0.634639 8.2:-3454083 MS.gene33525:CDS
GGACAATATGTAAGGCCCGT+AGG 0.636455 8.2:-3455558 MS.gene33525:CDS
TCACCTTCAATTGTACACAT+AGG 0.636668 8.2:+3455586 None:intergenic
ATGGGTCTATCTGAAATATG+CGG 0.636801 8.2:-3454538 MS.gene33525:CDS
ACGACCTCGATCCTGTGCGA+AGG 0.639634 8.2:-3455262 MS.gene33525:CDS
ATCTGCATTAGACATTGCCG+TGG 0.643012 8.2:-3455720 MS.gene33525:intron
GGTCCCTTCGCACAGGATCG+AGG 0.647508 8.2:+3455258 None:intergenic
TTCTGGCAGAAGCCATACCA+CGG 0.648051 8.2:+3454228 None:intergenic
GGCAAGGTCTACTTCAGACA+AGG 0.649008 8.2:-3454603 MS.gene33525:CDS
CCTGATGAAGTAATGAACCT+CGG 0.649312 8.2:+3454432 None:intergenic
CGCTTACAGAACCCAAACCA+CGG 0.655051 8.2:+3455703 None:intergenic
TTATTTAGCAGTTAAAGGCG+AGG 0.655685 8.2:-3454731 MS.gene33525:intron
GAGGTTCATTACTTCATCAG+GGG 0.659487 8.2:-3454430 MS.gene33525:CDS
CAAGTGAGATGGCAATGATG+AGG 0.660753 8.2:-3456356 MS.gene33525:CDS
ACTCATGACCATAAGAAACA+AGG 0.663177 8.2:-3454502 MS.gene33525:CDS
TCAAAATCTTGACAGATGTG+CGG 0.663839 8.2:+3454385 None:intergenic
CGGACCAACAATCGTAAGTG+TGG 0.667344 8.2:+3454185 None:intergenic
ATTTGAGATAGTGATTGACC+TGG 0.673697 8.2:+3453920 None:intergenic
GGGTCTATCTGAAATATGCG+GGG 0.673953 8.2:-3454536 MS.gene33525:CDS
TATATACCAAAGTGCCCGAG+AGG 0.678235 8.2:+3454349 None:intergenic
AAGGCCCGTAGGTTTGTCGA+AGG 0.678246 8.2:-3455547 MS.gene33525:CDS
TGTTTAACCAGACTTTGCCG+TGG 0.679547 8.2:-3454245 MS.gene33525:intron
AAACCCACCTAAGTCAGACA+TGG 0.685362 8.2:+3457228 None:intergenic
GTGAGGTCCGTATTTATCGG+AGG 0.693002 8.2:+3455673 None:intergenic
AGGTCGTTCGATAGACCTTG+CGG 0.706168 8.2:-3455527 MS.gene33525:CDS
TATGTGAAACCTATGGTCAG+CGG 0.713139 8.2:-3453961 MS.gene33525:CDS
GAGGTTCGACTGTATCGCAG+AGG 0.730544 8.2:-3456106 MS.gene33525:CDS
CAACGTAATCAATGACAGTG+AGG 0.734984 8.2:+3455656 None:intergenic
GATAGACCTTGCGGTCACGG+AGG 0.760484 8.2:-3455518 MS.gene33525:CDS
GTACAATTGAAGGTGATTGG+GGG 0.819509 8.2:-3455579 MS.gene33525:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGCATAATATAAAATATAAA+TGG - chr8.2:3454485-3454504 MS.gene33525:CDS 10.0%
!! AAAAAACCATATAAATTCAT+TGG + chr8.2:3455807-3455826 None:intergenic 15.0%
!! AAAAGATTGAAAAAAACATT+TGG + chr8.2:3454554-3454573 None:intergenic 15.0%
!! GGTTAATATAATTAGATATT+TGG - chr8.2:3456792-3456811 MS.gene33525:intron 15.0%
!! TACATTCTAATTTGAATATA+TGG - chr8.2:3456047-3456066 MS.gene33525:CDS 15.0%
!!! TATGTTAACATTTTCTATTA+TGG - chr8.2:3456322-3456341 MS.gene33525:intron 15.0%
!!! TTATTTTGATTTTTAATGCA+TGG - chr8.2:3454162-3454181 MS.gene33525:CDS 15.0%
!! AGAAATAAACAATAACACAA+CGG + chr8.2:3455320-3455339 None:intergenic 20.0%
!! ATGTTAACATAAATTTATGC+CGG + chr8.2:3456313-3456332 None:intergenic 20.0%
!! GATATTTATAACATTGTAGA+TGG - chr8.2:3456541-3456560 MS.gene33525:intron 20.0%
!! GTATCTTAAGAATACAAAAT+TGG + chr8.2:3454266-3454285 None:intergenic 20.0%
!! TACATGTTTACTCTTTATTA+TGG - chr8.2:3454283-3454302 MS.gene33525:intron 20.0%
!! TTATGAGGAAAAAAAATCTA+TGG - chr8.2:3454011-3454030 MS.gene33525:CDS 20.0%
!!! AACTAACGTACAAATTTTTT+CGG + chr8.2:3456212-3456231 None:intergenic 20.0%
!!! TTTAGGACAAAAAATATCTA+GGG - chr8.2:3454309-3454328 MS.gene33525:intron 20.0%
! AAAATAATGATATGCAACAC+AGG + chr8.2:3454149-3454168 None:intergenic 25.0%
! AAATAATGATATGCAACACA+GGG + chr8.2:3454148-3454167 None:intergenic 25.0%
! AACATATTGTTAACATGCTA+AGG + chr8.2:3454103-3454122 None:intergenic 25.0%
! ATTTCGTTCATTCGATTATA+AGG - chr8.2:3456817-3456836 MS.gene33525:intron 25.0%
! GTTTCCTATCTAATATCATA+AGG - chr8.2:3456344-3456363 MS.gene33525:CDS 25.0%
! TTAGCATCAAACACATTTAT+TGG + chr8.2:3454865-3454884 None:intergenic 25.0%
! TTTCTGTTTGTGTTTAGTAA+CGG - chr8.2:3455349-3455368 MS.gene33525:intron 25.0%
!! AAATTTTCACGACAACAATA+AGG - chr8.2:3456020-3456039 MS.gene33525:CDS 25.0%
!! ACAACAATGATATTGTTGTT+TGG + chr8.2:3456463-3456482 None:intergenic 25.0%
!! GGTATATAATTTGCACTAAT+TGG - chr8.2:3456771-3456790 MS.gene33525:intron 25.0%
!! TATATGTTGTTTATTCTGTC+CGG - chr8.2:3455761-3455780 MS.gene33525:intron 25.0%
!!! AACTTGTTATAAACATGCAA+AGG + chr8.2:3454522-3454541 None:intergenic 25.0%
!!! CTAGATATTTTTTGTCCTAA+AGG + chr8.2:3454310-3454329 None:intergenic 25.0%
!!! CTTTAGGACAAAAAATATCT+AGG - chr8.2:3454308-3454327 MS.gene33525:intron 25.0%
AACAACATATACTTCAGTTC+AGG + chr8.2:3455752-3455771 None:intergenic 30.0%
AAGGTTATCTTACTGTTTGT+TGG - chr8.2:3456836-3456855 MS.gene33525:intron 30.0%
AATATGCCTTATGCTATGAT+TGG - chr8.2:3456988-3457007 MS.gene33525:intron 30.0%
ACAAATGCAGATTTGATTAG+AGG - chr8.2:3455657-3455676 MS.gene33525:CDS 30.0%
ACAACATATACTTCAGTTCA+GGG + chr8.2:3455751-3455770 None:intergenic 30.0%
ACGAATAACAATCAAATTGC+CGG + chr8.2:3455783-3455802 None:intergenic 30.0%
ACTCTTTATTATGGTCCTTT+AGG - chr8.2:3454292-3454311 MS.gene33525:intron 30.0%
AGTTATCATAAACTCTGTCT+AGG - chr8.2:3456169-3456188 MS.gene33525:CDS 30.0%
ATCAAACATAACGATATCAG+AGG + chr8.2:3454459-3454478 None:intergenic 30.0%
ATCAAATCTGCATTTGTAGA+CGG + chr8.2:3455654-3455673 None:intergenic 30.0%
CACACCTTATGATATTAGAT+AGG + chr8.2:3456351-3456370 None:intergenic 30.0%
CAGATATACTTTCTTATGTC+CGG - chr8.2:3456291-3456310 MS.gene33525:intron 30.0%
GTTGAAGTTCAGAAAAAGAA+TGG - chr8.2:3456481-3456500 MS.gene33525:CDS 30.0%
TACTCCAATAATATCCAAAC+TGG - chr8.2:3455178-3455197 MS.gene33525:intron 30.0%
TAGTCTTTCAAAAAGCAGTT+AGG + chr8.2:3454924-3454943 None:intergenic 30.0%
TATGTCCTCATCTATTAGAA+TGG + chr8.2:3454835-3454854 None:intergenic 30.0%
TCACTATCTCAAATATTGCA+AGG - chr8.2:3457194-3457213 MS.gene33525:CDS 30.0%
TCTATTACTCTCTACAAATC+CGG + chr8.2:3456105-3456124 None:intergenic 30.0%
TTCGTGCCAATGAATTTATA+TGG - chr8.2:3455798-3455817 MS.gene33525:intron 30.0%
! AACAAAACTTGGTGGTTAAA+AGG + chr8.2:3455975-3455994 None:intergenic 30.0%
! ACAATATTAGGAGGCATAAA+AGG + chr8.2:3454622-3454641 None:intergenic 30.0%
! ACTTCTTTTGCAAAACATGA+AGG + chr8.2:3456403-3456422 None:intergenic 30.0%
! CAATATTAGGAGGCATAAAA+GGG + chr8.2:3454621-3454640 None:intergenic 30.0%
! CACTATTGAATTGACTTACT+CGG - chr8.2:3455247-3455266 MS.gene33525:CDS 30.0%
! TCATGTTTTGCAAAAGAAGT+AGG - chr8.2:3456403-3456422 MS.gene33525:CDS 30.0%
! TGTCCTTATTTAGCAGTTAA+AGG - chr8.2:3456369-3456388 MS.gene33525:CDS 30.0%
! TGTTAATTTTCGTAGGGAAT+GGG - chr8.2:3454891-3454910 MS.gene33525:intron 30.0%
!! GATATATCGGATAATGGATA+TGG + chr8.2:3456643-3456662 None:intergenic 30.0%
!!! AACTGCTTTTTGAAAGACTA+TGG - chr8.2:3454924-3454943 MS.gene33525:intron 30.0%
!!! ATTTGTACGTTAGTTTTGTG+CGG - chr8.2:3456217-3456236 MS.gene33525:intron 30.0%
AAATCTGTTGTTGATCGTCA+AGG + chr8.2:3455129-3455148 None:intergenic 35.0%
AACGCAGCATAAACAAAACT+TGG + chr8.2:3455986-3456005 None:intergenic 35.0%
AAGGAGCAGATCACAATATT+AGG + chr8.2:3454634-3454653 None:intergenic 35.0%
ACCTCAATCTCATTGTTCAT+TGG + chr8.2:3454984-3455003 None:intergenic 35.0%
ACTCATGACCATAAGAAACA+AGG - chr8.2:3456603-3456622 MS.gene33525:intron 35.0%
ACTCCTATGTGTACAATTGA+AGG - chr8.2:3455516-3455535 MS.gene33525:CDS 35.0%
AGCATGCATGAAAATGTTGT+AGG - chr8.2:3454694-3454713 MS.gene33525:CDS 35.0%
AGGTTTCACATAGTATCCAT+GGG + chr8.2:3457136-3457155 None:intergenic 35.0%
AGTTCAGAAAAAGAATGGCA+AGG - chr8.2:3456486-3456505 MS.gene33525:CDS 35.0%
ATAACATTGTAGATGGTGCA+TGG - chr8.2:3456548-3456567 MS.gene33525:intron 35.0%
ATCGTCAAGGTCATAAGATT+TGG + chr8.2:3455116-3455135 None:intergenic 35.0%
ATGCATGAAAATGTTGTAGG+TGG - chr8.2:3454697-3454716 MS.gene33525:CDS 35.0%
ATGGTCATGAGTAGTAGATT+AGG + chr8.2:3456595-3456614 None:intergenic 35.0%
CAGACATAGTGTCAAATTCA+AGG + chr8.2:3454783-3454802 None:intergenic 35.0%
CATAAACAACCACAGTAAAG+AGG + chr8.2:3453996-3454015 None:intergenic 35.0%
CATATTATTTGCAACAGCGA+AGG + chr8.2:3456974-3456993 None:intergenic 35.0%
CATCAAACACATTTATTGGC+AGG + chr8.2:3454861-3454880 None:intergenic 35.0%
CTTTACTGTGGTTGTTTATG+AGG - chr8.2:3453996-3454015 MS.gene33525:CDS 35.0%
GCTTCTATATTCTGTTTCCA+AGG - chr8.2:3455711-3455730 MS.gene33525:CDS 35.0%
GGCATAAAAGGGAAAAAGTA+AGG + chr8.2:3454610-3454629 None:intergenic 35.0%
GTGTACAATTGAAGGTGATT+GGG - chr8.2:3455524-3455543 MS.gene33525:CDS 35.0%
TAACATTGTAGATGGTGCAT+GGG - chr8.2:3456549-3456568 MS.gene33525:intron 35.0%
TAGGTTTCACATAGTATCCA+TGG + chr8.2:3457137-3457156 None:intergenic 35.0%
TCAAAATCTTGACAGATGTG+CGG + chr8.2:3456723-3456742 None:intergenic 35.0%
TCACCTTCAATTGTACACAT+AGG + chr8.2:3455522-3455541 None:intergenic 35.0%
TCCAATGAACAATGAGATTG+AGG - chr8.2:3454980-3454999 MS.gene33525:intron 35.0%
TCCTCATCTATTAGAATGGT+CGG + chr8.2:3454831-3454850 None:intergenic 35.0%
TCGCCTTTAACTGCTAAATA+AGG + chr8.2:3456375-3456394 None:intergenic 35.0%
TGCATGAAAATGTTGTAGGT+GGG - chr8.2:3454698-3454717 MS.gene33525:CDS 35.0%
TGGATACTATGTGAAACCTA+TGG - chr8.2:3457137-3457156 MS.gene33525:intron 35.0%
TGTACAATTGAAGGTGATTG+GGG - chr8.2:3455525-3455544 MS.gene33525:CDS 35.0%
TGTGTACAATTGAAGGTGAT+TGG - chr8.2:3455523-3455542 MS.gene33525:CDS 35.0%
TTATTTAGCAGTTAAAGGCG+AGG - chr8.2:3456374-3456393 MS.gene33525:CDS 35.0%
! AGCTTTATATGAGGAAAGGT+TGG - chr8.2:3455027-3455046 MS.gene33525:intron 35.0%
! ATATGGTTGAAGAGTGTAAG+TGG - chr8.2:3456064-3456083 MS.gene33525:CDS 35.0%
! ATGGGTCTATCTGAAATATG+CGG - chr8.2:3456567-3456586 MS.gene33525:intron 35.0%
! ATTTGAGATAGTGATTGACC+TGG + chr8.2:3457188-3457207 None:intergenic 35.0%
! CATGTCTGAAATAGAAACCA+TGG - chr8.2:3456253-3456272 MS.gene33525:intron 35.0%
! GACAAGCTTTATATGAGGAA+AGG - chr8.2:3455023-3455042 MS.gene33525:intron 35.0%
! GATCAACAACAGATTTTTCG+AGG - chr8.2:3455133-3455152 MS.gene33525:intron 35.0%
! GTGTTAATTTTCGTAGGGAA+TGG - chr8.2:3454890-3454909 MS.gene33525:intron 35.0%
!! TATATGAGGAAAGGTTGGTA+TGG - chr8.2:3455032-3455051 MS.gene33525:intron 35.0%
!! TGCTTTTTGAAAGACTATGG+TGG - chr8.2:3454927-3454946 MS.gene33525:intron 35.0%
!!! TGTTTTAACTGGAAACGCTT+TGG - chr8.2:3453899-3453918 MS.gene33525:CDS 35.0%
!!! TTAGGTGGGTTTGTTTTAAC+TGG - chr8.2:3453888-3453907 MS.gene33525:CDS 35.0%
AAGGCTTCTTGTTACTCTGA+TGG + chr8.2:3454591-3454610 None:intergenic 40.0%
ACAGTGAGGTCCGTATTTAT+CGG + chr8.2:3455438-3455457 None:intergenic 40.0%
ACATAACGATATCAGAGGCA+TGG + chr8.2:3454454-3454473 None:intergenic 40.0%
ACTTACTCGGATGTTAACTC+AGG - chr8.2:3455260-3455279 MS.gene33525:CDS 40.0%
AGGATGTTTGGTATTCACTG+TGG - chr8.2:3455280-3455299 MS.gene33525:intron 40.0%
AGGCTTCTTGTTACTCTGAT+GGG + chr8.2:3454590-3454609 None:intergenic 40.0%
ATGACCATAAGAAACAAGGC+TGG - chr8.2:3456607-3456626 MS.gene33525:intron 40.0%
ATGCCTTATGCTATGATTGG+TGG - chr8.2:3456991-3457010 MS.gene33525:intron 40.0%
ATTAGACATTGCCGTGGTTT+GGG - chr8.2:3455391-3455410 MS.gene33525:intron 40.0%
ATTATTGGAGTAGTGTGAGC+AGG + chr8.2:3455170-3455189 None:intergenic 40.0%
CAACGTAATCAATGACAGTG+AGG + chr8.2:3455452-3455471 None:intergenic 40.0%
CATAAGAAACAAGGCTGGAT+TGG - chr8.2:3456612-3456631 MS.gene33525:intron 40.0%
CATGAAAATGTTGTAGGTGG+GGG - chr8.2:3454700-3454719 MS.gene33525:CDS 40.0%
CCTGATGAAGTAATGAACCT+CGG + chr8.2:3456676-3456695 None:intergenic 40.0%
CCTTAGCAAGTTACCAGTAT+AGG - chr8.2:3454406-3454425 MS.gene33525:CDS 40.0%
CGAGGTTCATTACTTCATCA+GGG - chr8.2:3456674-3456693 MS.gene33525:intron 40.0%
CGGTCCAGTTTGGATATTAT+TGG + chr8.2:3455185-3455204 None:intergenic 40.0%
CGTGTTACCTCCGATAAATA+CGG - chr8.2:3455425-3455444 MS.gene33525:CDS 40.0%
GACAAAGATAACACAGTCCT+TGG - chr8.2:3457084-3457103 MS.gene33525:intron 40.0%
GACATGCAAAGCTATGTTCT+AGG + chr8.2:3454197-3454216 None:intergenic 40.0%
GACTTCTACAACATTGAGCT+TGG - chr8.2:3455062-3455081 MS.gene33525:intron 40.0%
GAGCAGATCACAATATTAGG+AGG + chr8.2:3454631-3454650 None:intergenic 40.0%
GAGGTTCATTACTTCATCAG+GGG - chr8.2:3456675-3456694 MS.gene33525:intron 40.0%
GCAAGGGATATATCGGATAA+TGG + chr8.2:3456649-3456668 None:intergenic 40.0%
GCAGCATAAACAAAACTTGG+TGG + chr8.2:3455983-3456002 None:intergenic 40.0%
GCATGAAAATGTTGTAGGTG+GGG - chr8.2:3454699-3454718 MS.gene33525:CDS 40.0%
GGACTGTGTTATCTTTGTCA+TGG + chr8.2:3457083-3457102 None:intergenic 40.0%
GGATGTTAACTCAGGATGTT+TGG - chr8.2:3455268-3455287 MS.gene33525:CDS 40.0%
GGGTACAAAATGCATAACCT+TGG + chr8.2:3455731-3455750 None:intergenic 40.0%
GTACAATTGAAGGTGATTGG+GGG - chr8.2:3455526-3455545 MS.gene33525:CDS 40.0%
GTGGATAAAATGATGCAGAC+CGG - chr8.2:3456083-3456102 MS.gene33525:CDS 40.0%
TATGTGAAACCTATGGTCAG+CGG - chr8.2:3457144-3457163 MS.gene33525:intron 40.0%
TCACCACCAATCATAGCATA+AGG + chr8.2:3456997-3457016 None:intergenic 40.0%
TCAGACTGCAATATGAACCT+TGG + chr8.2:3455690-3455709 None:intergenic 40.0%
TCATCATTGCCATCTCACTT+GGG + chr8.2:3454750-3454769 None:intergenic 40.0%
TCCGACCATTCTAATAGATG+AGG - chr8.2:3454827-3454846 MS.gene33525:intron 40.0%
TGACAGATAAAGTTCAGCCA+TGG + chr8.2:3456273-3456292 None:intergenic 40.0%
TGATTGGGGGACAATATGTA+AGG - chr8.2:3455539-3455558 MS.gene33525:CDS 40.0%
TGCATGTTACCTCTTTACTG+TGG - chr8.2:3453984-3454003 MS.gene33525:CDS 40.0%
TGCGGAAAAAATGCACTAAC+TGG + chr8.2:3456705-3456724 None:intergenic 40.0%
TGTCACGCTGAATGAACTTT+AGG + chr8.2:3455494-3455513 None:intergenic 40.0%
TTGATTACGTTGGATTTGCC+TGG - chr8.2:3455460-3455479 MS.gene33525:CDS 40.0%
! AATTTTCGTAGGGAATGGGT+CGG - chr8.2:3454895-3454914 MS.gene33525:intron 40.0%
! ATGCGCGTGTTAATTTTCGT+AGG - chr8.2:3454884-3454903 MS.gene33525:intron 40.0%
! CTCACTGTCATTGATTACGT+TGG - chr8.2:3455450-3455469 MS.gene33525:CDS 40.0%
! TGCGCGTGTTAATTTTCGTA+GGG - chr8.2:3454885-3454904 MS.gene33525:intron 40.0%
! TGGGTCTATCTGAAATATGC+GGG - chr8.2:3456568-3456587 MS.gene33525:intron 40.0%
!! ATGCTATGATTGGTGGTGAT+TGG - chr8.2:3456998-3457017 MS.gene33525:intron 40.0%
!! CAATCCAGCCTTGTTTCTTA+TGG + chr8.2:3456614-3456633 None:intergenic 40.0%
!! CCTATACTGGTAACTTGCTA+AGG + chr8.2:3454409-3454428 None:intergenic 40.0%
!! TGATTAGAGGCATTGATCCA+AGG - chr8.2:3455670-3455689 MS.gene33525:CDS 40.0%
AAAATCACGACGGTCCAGTT+TGG + chr8.2:3455195-3455214 None:intergenic 45.0%
AACGACCTTCGACAAACCTA+CGG + chr8.2:3455566-3455585 None:intergenic 45.0%
AACGTATACCCCAAGTGAGA+TGG - chr8.2:3454738-3454757 MS.gene33525:intron 45.0%
AATTCCCCCCAAAATCACGA+CGG + chr8.2:3455205-3455224 None:intergenic 45.0%
AGTATGCTGGAACAGATGTC+GGG - chr8.2:3457222-3457241 MS.gene33525:CDS 45.0%
ATCCATGGGTGCAGTGTATT+GGG + chr8.2:3457122-3457141 None:intergenic 45.0%
ATCTCACTTGGGGTATACGT+TGG + chr8.2:3454739-3454758 None:intergenic 45.0%
ATCTGCATTAGACATTGCCG+TGG - chr8.2:3455385-3455404 MS.gene33525:intron 45.0%
CAACAGCGAACTTAACTGCA+TGG + chr8.2:3457059-3457078 None:intergenic 45.0%
CAAGTGAGATGGCAATGATG+AGG - chr8.2:3454749-3454768 MS.gene33525:intron 45.0%
CATCATTGCCATCTCACTTG+GGG + chr8.2:3454749-3454768 None:intergenic 45.0%
CATTAGACATTGCCGTGGTT+TGG - chr8.2:3455390-3455409 MS.gene33525:intron 45.0%
CCAACAATCGTAAGTGTGGT+AGG + chr8.2:3456919-3456938 None:intergenic 45.0%
CCGAGGTTCATTACTTCATC+AGG - chr8.2:3456673-3456692 MS.gene33525:intron 45.0%
CCTACCACACTTACGATTGT+TGG - chr8.2:3456916-3456935 MS.gene33525:intron 45.0%
CGCTGTCATAGAACCTATAC+TGG + chr8.2:3454422-3454441 None:intergenic 45.0%
CTCATCATTGCCATCTCACT+TGG + chr8.2:3454751-3454770 None:intergenic 45.0%
CTTACGATTGTTGGTCCGAA+CGG - chr8.2:3456925-3456944 MS.gene33525:intron 45.0%
GAACTTTAGGTCACATCTCC+AGG + chr8.2:3455481-3455500 None:intergenic 45.0%
GAGTATGCTGGAACAGATGT+CGG - chr8.2:3457221-3457240 MS.gene33525:CDS 45.0%
GTAAGTGTGGTAGGTTTCTG+TGG + chr8.2:3456910-3456929 None:intergenic 45.0%
GTTTCTGTGGCAAGGATTTC+TGG + chr8.2:3456897-3456916 None:intergenic 45.0%
TATCCATGGGTGCAGTGTAT+TGG + chr8.2:3457123-3457142 None:intergenic 45.0%
TGCACAAGGAATGCTGTCAT+TGG - chr8.2:3453926-3453945 MS.gene33525:CDS 45.0%
TGCAGTGTATTGGGGTATGT+CGG + chr8.2:3457113-3457132 None:intergenic 45.0%
TGCATGCTGCAAATCAGCTT+TGG + chr8.2:3454682-3454701 None:intergenic 45.0%
TGTTTAACCAGACTTTGCCG+TGG - chr8.2:3456860-3456879 MS.gene33525:intron 45.0%
! AAACTGGACCGTCGTGATTT+TGG - chr8.2:3455194-3455213 MS.gene33525:intron 45.0%
! AACTGGACCGTCGTGATTTT+GGG - chr8.2:3455195-3455214 MS.gene33525:intron 45.0%
! GAGGCGACAAGCTTTATATG+AGG - chr8.2:3455018-3455037 MS.gene33525:intron 45.0%
! GGGTCTATCTGAAATATGCG+GGG - chr8.2:3456569-3456588 MS.gene33525:intron 45.0%
! TATATACCAAAGTGCCCGAG+AGG + chr8.2:3456759-3456778 None:intergenic 45.0%
! TTCTTGTTACTCTGATGGGC+TGG + chr8.2:3454586-3454605 None:intergenic 45.0%
!! ACAACATTGAGCTTGGTGCA+TGG - chr8.2:3455069-3455088 MS.gene33525:intron 45.0%
!! GAAAGGTTGGTATGGACTGA+AGG - chr8.2:3455040-3455059 MS.gene33525:intron 45.0%
!! TCGTGATTTTGGGGGGAATT+TGG - chr8.2:3455205-3455224 MS.gene33525:intron 45.0%
!! TCTTGTTACTCTGATGGGCT+GGG + chr8.2:3454585-3454604 None:intergenic 45.0%
!!! TGTACGTTAGTTTTGTGCGG+TGG - chr8.2:3456220-3456239 MS.gene33525:intron 45.0%
AACCAGACTTTGCCGTGGTA+TGG - chr8.2:3456865-3456884 MS.gene33525:intron 50.0%
AATGAACCTCGGCAACGCAA+GGG + chr8.2:3456665-3456684 None:intergenic 50.0%
ACCTCTGCGATGTGCAAATC+AGG + chr8.2:3457026-3457045 None:intergenic 50.0%
ACGACCTTCGACAAACCTAC+GGG + chr8.2:3455565-3455584 None:intergenic 50.0%
ACTTCGTCTGATGTCCTCTC+GGG - chr8.2:3456742-3456761 MS.gene33525:intron 50.0%
AGGTCGTTCGATAGACCTTG+CGG - chr8.2:3455578-3455597 MS.gene33525:CDS 50.0%
AGGTCTACTTCAGACAAGGC+TGG - chr8.2:3456506-3456525 MS.gene33525:CDS 50.0%
ATATATCCCTTGCGTTGCCG+AGG - chr8.2:3456656-3456675 MS.gene33525:intron 50.0%
ATCTGCTCCTTGCTTGAGTG+TGG - chr8.2:3454643-3454662 MS.gene33525:CDS 50.0%
CAAGGAATGCTGTCATTGGC+AGG - chr8.2:3453930-3453949 MS.gene33525:CDS 50.0%
CAGTGGTCGATATGTGTACC+AGG - chr8.2:3457167-3457186 MS.gene33525:intron 50.0%
CATCTCCATGTACAGCCGTT+CGG + chr8.2:3456943-3456962 None:intergenic 50.0%
CGCTTACAGAACCCAAACCA+CGG + chr8.2:3455405-3455424 None:intergenic 50.0%
CGGACCAACAATCGTAAGTG+TGG + chr8.2:3456923-3456942 None:intergenic 50.0%
CGGCAACGCAAGGGATATAT+CGG + chr8.2:3456656-3456675 None:intergenic 50.0%
CTGCATTTGTAGACGGCACA+GGG + chr8.2:3455647-3455666 None:intergenic 50.0%
GACTTCGTCTGATGTCCTCT+CGG - chr8.2:3456741-3456760 MS.gene33525:intron 50.0%
GATAAGTCCTCAACCGAGAC+AGG + chr8.2:3455871-3455890 None:intergenic 50.0%
GATTTGCACATCGCAGAGGT+TGG - chr8.2:3457026-3457045 MS.gene33525:intron 50.0%
GGACAATATGTAAGGCCCGT+AGG - chr8.2:3455547-3455566 MS.gene33525:CDS 50.0%
GGCAAGGTCTACTTCAGACA+AGG - chr8.2:3456502-3456521 MS.gene33525:CDS 50.0%
GTGAGGTCCGTATTTATCGG+AGG + chr8.2:3455435-3455454 None:intergenic 50.0%
TAATGAACCTCGGCAACGCA+AGG + chr8.2:3456666-3456685 None:intergenic 50.0%
TCCATGGGTGCAGTGTATTG+GGG + chr8.2:3457121-3457140 None:intergenic 50.0%
TCTGCATTTGTAGACGGCAC+AGG + chr8.2:3455648-3455667 None:intergenic 50.0%
TGTGGTAGGTTTCTGTGGCA+AGG + chr8.2:3456905-3456924 None:intergenic 50.0%
TTCGATAGACCTTGCGGTCA+CGG - chr8.2:3455584-3455603 MS.gene33525:CDS 50.0%
TTCTGGCAGAAGCCATACCA+CGG + chr8.2:3456880-3456899 None:intergenic 50.0%
TTGGGGTATGTCGGAAACCA+AGG + chr8.2:3457104-3457123 None:intergenic 50.0%
! AACGCTTTGGATGCTGCACA+AGG - chr8.2:3453912-3453931 MS.gene33525:CDS 50.0%
! ACCTGATTTGCACATCGCAG+AGG - chr8.2:3457022-3457041 MS.gene33525:intron 50.0%
! ACTGGACCGTCGTGATTTTG+GGG - chr8.2:3455196-3455215 MS.gene33525:intron 50.0%
! TTGCAAGGCGAAGAGTATGC+TGG - chr8.2:3457209-3457228 MS.gene33525:CDS 50.0%
!! ACTTCAGACAAGGCTGGTCT+AGG - chr8.2:3456512-3456531 MS.gene33525:CDS 50.0%
!! CTTCAGACAAGGCTGGTCTA+GGG - chr8.2:3456513-3456532 MS.gene33525:CDS 50.0%
AAACCTATGGTCAGCGGCAG+TGG - chr8.2:3457150-3457169 MS.gene33525:intron 55.0%
AAGGCCCGTAGGTTTGTCGA+AGG - chr8.2:3455558-3455577 MS.gene33525:CDS 55.0%
ACCCCAATACACTGCACCCA+TGG - chr8.2:3457117-3457136 MS.gene33525:intron 55.0%
AGCCATACCACGGCAAAGTC+TGG + chr8.2:3456870-3456889 None:intergenic 55.0%
CCAACGACCACACTCAAGCA+AGG + chr8.2:3454653-3454672 None:intergenic 55.0%
CCTTGCTTGAGTGTGGTCGT+TGG - chr8.2:3454650-3454669 MS.gene33525:CDS 55.0%
GAGGTTCGACTGTATCGCAG+AGG - chr8.2:3454999-3455018 MS.gene33525:intron 55.0%
GGAATGCTGTCATTGGCAGG+TGG - chr8.2:3453933-3453952 MS.gene33525:CDS 55.0%
TGATGTCCTCTCGGGCACTT+TGG - chr8.2:3456750-3456769 MS.gene33525:intron 55.0%
TTGGTCCGAACGGCTGTACA+TGG - chr8.2:3456935-3456954 MS.gene33525:intron 55.0%
! ACATCGCAGAGGTTGGTTGC+AGG - chr8.2:3457033-3457052 MS.gene33525:intron 55.0%
! CTGGACCGTCGTGATTTTGG+GGG - chr8.2:3455197-3455216 MS.gene33525:intron 55.0%
! TGGACCGTCGTGATTTTGGG+GGG - chr8.2:3455198-3455217 MS.gene33525:intron 55.0%
!! ACAAGGCTGGTCTAGGGTGA+AGG - chr8.2:3456519-3456538 MS.gene33525:CDS 55.0%
ACGACCTCGATCCTGTGCGA+AGG - chr8.2:3455843-3455862 MS.gene33525:CDS 60.0%
CGACCTCGATCCTGTGCGAA+GGG - chr8.2:3455844-3455863 MS.gene33525:CDS 60.0%
CTGTGCGAAGGGACCTGTCT+CGG - chr8.2:3455855-3455874 MS.gene33525:CDS 60.0%
GAAGGGACCTGTCTCGGTTG+AGG - chr8.2:3455861-3455880 MS.gene33525:CDS 60.0%
GATAGACCTTGCGGTCACGG+AGG - chr8.2:3455587-3455606 MS.gene33525:CDS 60.0%
TCTTCTCCTCCGTGACCGCA+AGG + chr8.2:3455596-3455615 None:intergenic 60.0%
CGACCACTGCCGCTGACCAT+AGG + chr8.2:3457156-3457175 None:intergenic 65.0%
CGAGACAGGTCCCTTCGCAC+AGG + chr8.2:3455857-3455876 None:intergenic 65.0%
GGTCCCTTCGCACAGGATCG+AGG + chr8.2:3455850-3455869 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 3453879 3457248 3453879 ID=MS.gene33525
chr8.2 mRNA 3453879 3457248 3453879 ID=MS.gene33525.t1;Parent=MS.gene33525
chr8.2 exon 3457176 3457248 3457176 ID=MS.gene33525.t1.exon1;Parent=MS.gene33525.t1
chr8.2 CDS 3457176 3457248 3457176 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3456326 3456540 3456326 ID=MS.gene33525.t1.exon2;Parent=MS.gene33525.t1
chr8.2 CDS 3456326 3456540 3456326 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3455838 3456221 3455838 ID=MS.gene33525.t1.exon3;Parent=MS.gene33525.t1
chr8.2 CDS 3455838 3456221 3455838 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3455395 3455731 3455395 ID=MS.gene33525.t1.exon4;Parent=MS.gene33525.t1
chr8.2 CDS 3455395 3455731 3455395 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3455214 3455293 3455214 ID=MS.gene33525.t1.exon5;Parent=MS.gene33525.t1
chr8.2 CDS 3455214 3455293 3455214 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3454356 3454742 3454356 ID=MS.gene33525.t1.exon6;Parent=MS.gene33525.t1
chr8.2 CDS 3454356 3454742 3454356 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
chr8.2 exon 3453879 3454256 3453879 ID=MS.gene33525.t1.exon7;Parent=MS.gene33525.t1
chr8.2 CDS 3453879 3454256 3453879 ID=cds.MS.gene33525.t1;Parent=MS.gene33525.t1
Gene Sequence

>MS.gene33525

ATGTCTGACTTAGGTGGGTTTGTTTTAACTGGAAACGCTTTGGATGCTGCACAAGGAATGCTGTCATTGGCAGGTGGCATCTTCAACTACTTATTTTTTTTAAGATGCATGTTACCTCTTTACTGTGGTTGTTTATGAGGAAAAAAAATCTATGGTTTTGATATTTAGTTATGTGTGTTCTGTTATCATAGTTGATTGCTTTGTACATGTCATATAACATGCCTTAGCATGTTAACAATATGTTCAATAGCGATCACGTTTTTTTTCCCTGTGTTGCATATCATTATTTTGATTTTTAATGCATGGTATAGATGTCCTAGAACATAGCTTTGCATGTCAACAATAAGTTCAGTAGATGAAATGAACAACATTTCGCATGTTCAGCCAATTTTGTATTCTTAAGATACATGTTTACTCTTTATTATGGTCCTTTAGGACAAAAAATATCTAGGGTTCTGAATTTTTTTGCAGTGTTTAATATCATTATATTTGATTCTTTTTGCATGATGTAACTGTGATATAGCATACCTTAGCAAGTTACCAGTATAGGTTCTATGACAGCGAAATTTTTTCCATGCCTCTGATATCGTTATGTTTGATCATTTATGCATAATATAAAATATAAATGGCACATGACATACCTTTGCATGTTTATAACAAGTTCATTAGCAACCAAATGTTTTTTTCAATCTTTTTACATTAACCCAGCCCATCAGAGTAACAAGAAGCCTTACTTTTTCCCTTTTATGCCTCCTAATATTGTGATCTGCTCCTTGCTTGAGTGTGGTCGTTGGTTTTATCCAAAGCTGATTTGCAGCATGCATGAAAATGTTGTAGGTGGGGGTAACGACTTTCATCCAACGTATACCCCAAGTGAGATGGCAATGATGAGGACATACTTCCTTGAATTTGACACTATGTCTGTAAGTGTTGTTAAATAATTTTGTCTCCGACCATTCTAATAGATGAGGACATACTTCCTGCCAATAAATGTGTTTGATGCTAATGCGCGTGTTAATTTTCGTAGGGAATGGGTCGGATGCCTAACTGCTTTTTGAAAGACTATGGTGGTTATATTGAAGACTACGTTATGTTGCGAGATCCAATGAACAATGAGATTGAGGTTCGACTGTATCGCAGAGGCGACAAGCTTTATATGAGGAAAGGTTGGTATGGACTGAAGGACTTCTACAACATTGAGCTTGGTGCATGGATAGACTTGACATATGAAAGACCAAATCTTATGACCTTGACGATCAACAACAGATTTTTCGAGGAAATTTTGTATCCTGCTCACACTACTCCAATAATATCCAAACTGGACCGTCGTGATTTTGGGGGGAATTTGGATGATTTTTTTGAGACATTCACTATTGAATTGACTTACTCGGATGTTAACTCAGGATGTTTGGTATTCACTGTGGATTGCTTTATATTTCCGTTGTGTTATTGTTTATTTCTTAAATGATATTTCTGTTTGTGTTTAGTAACGGTGTTTATTATTTCATCTGCATTAGACATTGCCGTGGTTTGGGTTCTGTAAGCGCGTGTTACCTCCGATAAATACGGACCTCACTGTCATTGATTACGTTGGATTTGCCTGGAGATGTGACCTAAAGTTCATTCAGCGTGACAAGACTCCTATGTGTACAATTGAAGGTGATTGGGGGACAATATGTAAGGCCCGTAGGTTTGTCGAAGGTCGTTCGATAGACCTTGCGGTCACGGAGGAGAAGAATAATTATGTGCTTTACTTGAAATTTATCCCTGTGCCGTCTACAAATGCAGATTTGATTAGAGGCATTGATCCAAGGTTCATATTGCAGTCTGATGCTTCTATATTCTGTTTCCAAGGTTATGCATTTTGTACCCTGAACTGAAGTATATGTTGTTTATTCTGTCCGGCAATTTGATTGTTATTCGTGCCAATGAATTTATATGGTTTTTTATTACAGACTCTGCTAACGACCTCGATCCTGTGCGAAGGGACCTGTCTCGGTTGAGGACTTATCGTCTCGAGCTAGATAGCGACATTGTGAGATCTCTGTCTTCTTATTAGTGCAATTGTACTAAAAATTTGTGTAATTTATGTGCCTTTTAACCACCAAGTTTTGTTTATGCTGCGTTGTTCTTAAATTTTAAAATTTTCACGACAACAATAAGGATAGTACATTCTAATTTGAATATATGGTTGAAGAGTGTAAGTGGATAAAATGATGCAGACCGGATTTGTAGAGAGTAATAGAAGTTTTTGCATATACGAATCTGAGATTCAGACATAATTGATAATAGTTATCATAAACTCTGTCTAGGATTGCTGATCTCAGACGCCGAAAAAATTTGTACGTTAGTTTTGTGCGGTGGTTATTGTATTCATGTCTGAAATAGAAACCATGGCTGAACTTTATCTGTCAGATATACTTTCTTATGTCCGGCATAAATTTATGTTAACATTTTCTATTATGGTTTCCTATCTAATATCATAAGGTGTGTCCTTATTTAGCAGTTAAAGGCGAGGTTACCTTCATGTTTTGCAAAAGAAGTAGGCGTGCATATTGATGATCATGTTATGCTTCGTGATCCAAACAACAATATCATTGTTGTTGAAGTTCAGAAAAAGAATGGCAAGGTCTACTTCAGACAAGGCTGGTCTAGGGTGAAGGATATTTATAACATTGTAGATGGTGCATGGGTCTATCTGAAATATGCGGGGCCTAATCTACTACTCATGACCATAAGAAACAAGGCTGGATTGGAGATACCATATCCATTATCCGATATATCCCTTGCGTTGCCGAGGTTCATTACTTCATCAGGGGAGAGCCAGTTAGTGCATTTTTTCCGCACATCTGTCAAGATTTTGACTTCGTCTGATGTCCTCTCGGGCACTTTGGTATATAATTTGCACTAATTGGTTAATATAATTAGATATTTGGTTATTTCGTTCATTCGATTATAAGGTTATCTTACTGTTTGTTGGTTGTTTAACCAGACTTTGCCGTGGTATGGCTTCTGCCAGAAATCCTTGCCACAGAAACCTACCACACTTACGATTGTTGGTCCGAACGGCTGTACATGGAGATGTGATCTGACCTTCGCTGTTGCAAATAATATGCCTTATGCTATGATTGGTGGTGATTGGAACCTGATTTGCACATCGCAGAGGTTGGTTGCAGGCCATGCAGTTAAGTTCGCTGTTGTCCATGACAAAGATAACACAGTCCTTGGTTTCCGACATACCCCAATACACTGCACCCATGGATACTATGTGAAACCTATGGTCAGCGGCAGTGGTCGATATGTGTACCAGGTCAATCACTATCTCAAATATTGCAAGGCGAAGAGTATGCTGGAACAGATGTCGGGATGA
Protein sequence

>MS.gene33525.t1

MSDLGGFVLTGNALDAAQGMLSLAAHQSNKKPYFFPFMPPNIVICSLLECGRWFYPKLICSMHENVVGGGNDFHPTYTPSEMAMMRTYFLEFDTMSGMGRMPNCFLKDYGGYIEDYVMLRDPMNNEIEVRLYRRGDKLYMRKGWYGLKDFYNIELGAWIDLTYERPNLMTLTINNRFFEEILYPAHTTPIISKLDRRDFGGNLDDFFETFTIELTYSDVNSGCLTLPWFGFCKRVLPPINTDLTVIDYVGFAWRCDLKFIQRDKTPMCTIEGDWGTICKARRFVEGRSIDLAVTEEKNNYVLYLKFIPVPSTNADLIRGIDPRFILQSDASIFCFQDSANDLDPVRRDLSRLRTYRLELDSDILKARLPSCFAKEVGVHIDDHVMLRDPNNNIIVVEVQKKNGKVYFRQGWSRVKDIYNIVDGAWVYLKYAGPNLLLMTIRNKAGLEIPYPLSDISLALPRFITSSGESQLVHFFRTSVKILTSSDVLSGTLTLPWYGFCQKSLPQKPTTLTIVGPNGCTWRCDLTFAVANNMPYAMIGGDWNLICTSQRLVAGHAVKFAVVHDKDNTVLGFRHTPIHCTHGYYVKPMVSGSGRYVYQVNHYLKYCKAKSMLEQMSG