Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33748.t1 | XP_003608183.2 | 92.1 | 557 | 44 | 0 | 1 | 557 | 1 | 557 | 2.60E-280 | 974.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33748.t1 | G7JQR8 | 92.1 | 557 | 44 | 0 | 1 | 557 | 1 | 557 | 1.9e-280 | 974.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33748.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33748.t1 | MTR_4g090460 | 95.512 | 557 | 25 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1070 |
| MS.gene33748.t1 | MTR_4g090460 | 94.885 | 391 | 20 | 0 | 167 | 557 | 1 | 391 | 0.0 | 740 |
| MS.gene33748.t1 | MTR_4g090460 | 81.915 | 94 | 17 | 0 | 104 | 197 | 29 | 122 | 6.94e-44 | 160 |
| MS.gene33748.t1 | MTR_2g012600 | 51.250 | 480 | 207 | 11 | 95 | 556 | 275 | 745 | 5.80e-119 | 369 |
| MS.gene33748.t1 | MTR_2g012600 | 61.455 | 275 | 96 | 5 | 9 | 278 | 4 | 273 | 4.25e-94 | 303 |
| MS.gene33748.t1 | MTR_2g060760 | 34.857 | 175 | 79 | 5 | 9 | 148 | 21 | 195 | 3.92e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33748.t1 | AT1G61215 | 60.494 | 162 | 56 | 5 | 9 | 166 | 14 | 171 | 1.61e-49 | 178 |
| MS.gene33748.t1 | AT1G61215 | 36.795 | 337 | 170 | 13 | 201 | 514 | 111 | 427 | 3.99e-34 | 135 |
| MS.gene33748.t1 | AT1G61215 | 36.795 | 337 | 170 | 13 | 201 | 514 | 92 | 408 | 7.71e-34 | 134 |
| MS.gene33748.t1 | AT1G61215 | 55.738 | 122 | 47 | 4 | 49 | 166 | 34 | 152 | 6.67e-27 | 114 |
| MS.gene33748.t1 | AT2G42150 | 31.148 | 244 | 133 | 6 | 8 | 239 | 15 | 235 | 8.33e-18 | 87.4 |
| MS.gene33748.t1 | AT3G60110 | 30.625 | 160 | 84 | 2 | 4 | 143 | 47 | 199 | 2.04e-15 | 79.7 |
| MS.gene33748.t1 | AT2G44430 | 39.655 | 116 | 47 | 3 | 9 | 101 | 50 | 165 | 3.06e-14 | 76.3 |
| MS.gene33748.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 8.11e-14 | 74.7 |
| MS.gene33748.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 8.57e-14 | 74.7 |
Find 122 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATCTCGCCTGGTGTTTC+AGG | 0.123019 | 4.4:-23405345 | MS.gene33748:CDS |
| GAGATTACGCCTGGTGTTTC+AGG | 0.146830 | 4.4:-23405072 | MS.gene33748:CDS |
| ACATGTTCCTTCACAGAAAT+TGG | 0.179613 | 4.4:-23405220 | MS.gene33748:CDS |
| ACTCGCTTCATTAATATTTC+TGG | 0.224605 | 4.4:+23404936 | None:intergenic |
| CTGTTGCAATTCTTCATATT+TGG | 0.258493 | 4.4:+23406157 | None:intergenic |
| ACATGGGAGGAGCTTCTTCT+TGG | 0.262308 | 4.4:-23407915 | MS.gene33748:CDS |
| CTCATTCTTGTCAGCCTTGA+GGG | 0.265381 | 4.4:+23405563 | None:intergenic |
| CCTTTGCAACATTAATCTTC+TGG | 0.292069 | 4.4:+23403561 | None:intergenic |
| ACCACCAGTACTAGGCTTCT+TGG | 0.302528 | 4.4:+23403496 | None:intergenic |
| CTTATATTGACGGGTGTTCT+TGG | 0.307524 | 4.4:+23403712 | None:intergenic |
| TTCATAAGATTCGGAGTTGC+AGG | 0.312088 | 4.4:+23403398 | None:intergenic |
| TGTGAAGGAACATGTGATTC+TGG | 0.321301 | 4.4:+23405228 | None:intergenic |
| GAATTGCAACAGCGCTATTC+AGG | 0.321488 | 4.4:-23406146 | MS.gene33748:CDS |
| TGTGAAGGAACATCTAATTC+TGG | 0.326164 | 4.4:+23405501 | None:intergenic |
| GGTGAGGTTGTCAAATCTTC+TGG | 0.339149 | 4.4:-23404850 | MS.gene33748:CDS |
| ACATGGACTTTGACACTATA+AGG | 0.354571 | 4.4:-23403823 | MS.gene33748:CDS |
| TTCATTTCCTTCATAAGATT+CGG | 0.356180 | 4.4:+23403389 | None:intergenic |
| GGAGAACACGAACTTGAAAA+AGG | 0.362922 | 4.4:-23404818 | MS.gene33748:CDS |
| GAGAAATCAGAAGATTCAAT+TGG | 0.363491 | 4.4:-23405864 | MS.gene33748:CDS |
| AGCAGAGCTTAAGCGAGCTT+TGG | 0.364114 | 4.4:-23405886 | MS.gene33748:CDS |
| CAGAAGACATTGCTGGAACT+TGG | 0.372442 | 4.4:+23405103 | None:intergenic |
| GACAACCTCACCACAGTTGC+TGG | 0.380777 | 4.4:+23404861 | None:intergenic |
| TGGGAGGAGCTTCTTCTTGG+TGG | 0.399007 | 4.4:-23407912 | MS.gene33748:CDS |
| ATTCAAAACTTTCTCATGTT+CGG | 0.403224 | 4.4:+23405044 | None:intergenic |
| TTCTTGGTGGAGCTGTTATC+CGG | 0.405630 | 4.4:-23407899 | MS.gene33748:CDS |
| TCCGGCACGGCACTGGTGAT+TGG | 0.416103 | 4.4:-23407881 | MS.gene33748:CDS |
| CACTGCTAGGGCTTGGTATG+AGG | 0.418968 | 4.4:-23405928 | MS.gene33748:intron |
| TCTTTACTACCACCAGTACT+AGG | 0.419066 | 4.4:+23403488 | None:intergenic |
| TCAAAGGATGGGCTATCTGC+TGG | 0.419315 | 4.4:-23405441 | MS.gene33748:CDS |
| CACATCAAACCGATACAAAC+TGG | 0.424104 | 4.4:-23405410 | MS.gene33748:CDS |
| AAAGGAGAGGAAAGAGAAAG+AGG | 0.432152 | 4.4:-23404969 | MS.gene33748:CDS |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.4:+23405096 | None:intergenic |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.4:+23405369 | None:intergenic |
| ACATTAATCTTCTGGTTACA+AGG | 0.444554 | 4.4:+23403569 | None:intergenic |
| CAGAAGACATTGCTGGAACC+TGG | 0.448111 | 4.4:+23405376 | None:intergenic |
| TGTCAAAGTCCATGTGTCTC+TGG | 0.448970 | 4.4:+23403831 | None:intergenic |
| GCTGTTATCCGGCACGGCAC+TGG | 0.459398 | 4.4:-23407888 | MS.gene33748:CDS |
| GATGGCAGCGATCCTGCCTC+GGG | 0.461840 | 4.4:-23403533 | MS.gene33748:CDS |
| GACAGCTTTCTTGATGTGTA+AGG | 0.464881 | 4.4:+23403442 | None:intergenic |
| CGATGGCAGCGATCCTGCCT+CGG | 0.469474 | 4.4:-23403534 | MS.gene33748:CDS |
| TAAAGAGAATTCTCCGTCTT+CGG | 0.474363 | 4.4:-23403471 | MS.gene33748:CDS |
| AGATCTCGCCTGGTGTTTCA+GGG | 0.481234 | 4.4:-23405344 | MS.gene33748:CDS |
| TGGTAGAACTTTCTTTCAGC+CGG | 0.484226 | 4.4:+23404881 | None:intergenic |
| TGGTTACAAGGGCGGACACT+TGG | 0.484662 | 4.4:+23403581 | None:intergenic |
| ACTAAAGAGTTGTCAAAGGA+TGG | 0.489392 | 4.4:-23405453 | MS.gene33748:CDS |
| AGAAATCAGAAGATTCAATT+GGG | 0.490341 | 4.4:-23405863 | MS.gene33748:intron |
| ACCAATCACCAGTGCCGTGC+CGG | 0.491886 | 4.4:+23407880 | None:intergenic |
| AAATGAAGGAAAAGAAAAGA+CGG | 0.493555 | 4.4:-23403373 | MS.gene33748:CDS |
| CTTGTTGACAACAACTCAGT+TGG | 0.494073 | 4.4:-23405525 | MS.gene33748:CDS |
| AGATTACGCCTGGTGTTTCA+GGG | 0.501278 | 4.4:-23405071 | MS.gene33748:CDS |
| AAAAGAAAAGACGGAGAACT+AGG | 0.503354 | 4.4:-23403364 | MS.gene33748:CDS |
| TCTCATTCTTGTCAGCCTTG+AGG | 0.505573 | 4.4:+23405562 | None:intergenic |
| GAAGACATGGAGATCTCGCC+TGG | 0.524803 | 4.4:-23405354 | MS.gene33748:CDS |
| AGCGGAAGTGATTGTGACGT+GGG | 0.526318 | 4.4:-23407940 | MS.gene33748:CDS |
| ACTAAAGAGACGTCAAAGGA+TGG | 0.530356 | 4.4:-23405180 | MS.gene33748:CDS |
| GATAAGTTGACAGATACAGC+TGG | 0.532080 | 4.4:-23405291 | MS.gene33748:CDS |
| GAGAGGAAAGAGAAAGAGGA+AGG | 0.532691 | 4.4:-23404965 | MS.gene33748:CDS |
| GAATCTTATGAAGGAAATGA+AGG | 0.534107 | 4.4:-23403387 | MS.gene33748:CDS |
| CTGTCGTAAGCATGATAGCC+AGG | 0.534429 | 4.4:-23404731 | MS.gene33748:intron |
| GGTAGAACTTTCTTTCAGCC+GGG | 0.535651 | 4.4:+23404882 | None:intergenic |
| TCAAAGGATGGGTTATCTGC+TGG | 0.536634 | 4.4:-23405168 | MS.gene33748:CDS |
| ACTCTCTCCAATTTCTGTGA+AGG | 0.536812 | 4.4:+23405213 | None:intergenic |
| GGTTACAAGGGCGGACACTT+GGG | 0.540653 | 4.4:+23403582 | None:intergenic |
| CAACAAAACAATTGATTCAG+TGG | 0.544548 | 4.4:-23403789 | MS.gene33748:CDS |
| TCGTCGCGGCGGAGCTCCGA+GGG | 0.544805 | 4.4:-23407854 | MS.gene33748:CDS |
| AAACTGGTCTCATGAATGCC+AGG | 0.546467 | 4.4:-23405394 | MS.gene33748:CDS |
| GTAGAACAGCAAAGCATTGG+TGG | 0.547197 | 4.4:+23403736 | None:intergenic |
| TCGGAGCTCCGCCGCGACGA+CGG | 0.548546 | 4.4:+23407857 | None:intergenic |
| TGCAACTCCGAATCTTATGA+AGG | 0.548743 | 4.4:-23403396 | MS.gene33748:CDS |
| CAAAGGATGGGCTATCTGCT+GGG | 0.550496 | 4.4:-23405440 | MS.gene33748:CDS |
| TTCATGAGACCAGTTTGTAT+CGG | 0.551753 | 4.4:+23405401 | None:intergenic |
| CCAGAAGATTAATGTTGCAA+AGG | 0.552998 | 4.4:-23403561 | MS.gene33748:CDS |
| GGAGTAGAACAGCAAAGCAT+TGG | 0.553418 | 4.4:+23403733 | None:intergenic |
| AAAGCCAAGAAGCCTAGTAC+TGG | 0.562628 | 4.4:-23403500 | MS.gene33748:CDS |
| GTCGTCGCGGCGGAGCTCCG+AGG | 0.563753 | 4.4:-23407855 | MS.gene33748:CDS |
| GAAGACATGGAGATTACGCC+TGG | 0.563944 | 4.4:-23405081 | MS.gene33748:CDS |
| CGAGGCAGGATCGCTGCCAT+CGG | 0.565755 | 4.4:+23403535 | None:intergenic |
| TTGAAAGAGACTGTATATGA+AGG | 0.565850 | 4.4:-23405012 | MS.gene33748:CDS |
| ACACTTGGGACTTTCAAAGA+AGG | 0.569561 | 4.4:+23403596 | None:intergenic |
| CTAAAGAGTTGTCAAAGGAT+GGG | 0.572945 | 4.4:-23405452 | MS.gene33748:CDS |
| TGTAAGGATTTCACCGAAGA+CGG | 0.573201 | 4.4:+23403458 | None:intergenic |
| TAGTGCAGACTTATATTGAC+GGG | 0.575938 | 4.4:+23403703 | None:intergenic |
| GGTGTAATAGCGGAAGGAGA+AGG | 0.576294 | 4.4:+23407825 | None:intergenic |
| GGTGGAGCTGTTATCCGGCA+CGG | 0.577297 | 4.4:-23407894 | MS.gene33748:CDS |
| ACTCTCTCTAATTTCTGTGA+AGG | 0.579129 | 4.4:+23405486 | None:intergenic |
| CTAAAGAGACGTCAAAGGAT+GGG | 0.581958 | 4.4:-23405179 | MS.gene33748:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.4:-23405094 | MS.gene33748:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.4:-23405367 | MS.gene33748:CDS |
| ACCTCGGGTGTAATAGCGGA+AGG | 0.590376 | 4.4:+23407819 | None:intergenic |
| TTCTACTAAAGAGTTGTCAA+AGG | 0.593159 | 4.4:-23405457 | MS.gene33748:CDS |
| AAGGAGAAGGAGTTCTCCCT+CGG | 0.596440 | 4.4:+23407838 | None:intergenic |
| TTTGATAGCAGAAGCGACAA+AGG | 0.602191 | 4.4:-23403868 | MS.gene33748:intron |
| TCCTTCCGCTATTACACCCG+AGG | 0.606450 | 4.4:-23407820 | MS.gene33748:intron |
| ATCAAAGCTTGAATCCCTCA+AGG | 0.606788 | 4.4:-23405577 | MS.gene33748:CDS |
| GAGCGGAAGTGATTGTGACG+TGG | 0.615869 | 4.4:-23407941 | MS.gene33748:CDS |
| CATTAATCTTCTGGTTACAA+GGG | 0.620404 | 4.4:+23403570 | None:intergenic |
| GGATGGAACGAAATATCTGA+TGG | 0.620871 | 4.4:-23404797 | MS.gene33748:CDS |
| CACATCAAGAAAGCTGTCGG+TGG | 0.621814 | 4.4:-23403437 | MS.gene33748:CDS |
| TGGTGATTGGTCCGTCGTCG+CGG | 0.623067 | 4.4:-23407868 | MS.gene33748:CDS |
| GAAAGTTCTACCAGCAACTG+TGG | 0.627439 | 4.4:-23404871 | MS.gene33748:CDS |
| GCCAAGAAGCCTAGTACTGG+TGG | 0.629237 | 4.4:-23403497 | MS.gene33748:CDS |
| TCAATAGACCCTGAAACACC+AGG | 0.632152 | 4.4:+23405336 | None:intergenic |
| TTCAACTAAAGAGACGTCAA+AGG | 0.633541 | 4.4:-23405184 | MS.gene33748:CDS |
| GTAGTGCAGACTTATATTGA+CGG | 0.634239 | 4.4:+23403702 | None:intergenic |
| TCGGTTGACCCTGAAACACC+AGG | 0.635035 | 4.4:+23405063 | None:intergenic |
| GAGACTGTATATGAAGGACA+TGG | 0.635564 | 4.4:-23405006 | MS.gene33748:CDS |
| TAATCTTCTGGTTACAAGGG+CGG | 0.635573 | 4.4:+23403573 | None:intergenic |
| TTCTACCAGCAACTGTGGTG+AGG | 0.636519 | 4.4:-23404866 | MS.gene33748:CDS |
| CAAATCTTCTGGTGTAACTG+AGG | 0.640200 | 4.4:-23404839 | MS.gene33748:CDS |
| TTACACATCAAGAAAGCTGT+CGG | 0.641394 | 4.4:-23403440 | MS.gene33748:CDS |
| TATTACCTCGGGTGTAATAG+CGG | 0.641692 | 4.4:+23407815 | None:intergenic |
| ATAAGTTGACAGATACAGCT+GGG | 0.644236 | 4.4:-23405290 | MS.gene33748:CDS |
| AATGTTGCAAAGGTAGCCGA+TGG | 0.645708 | 4.4:-23403551 | MS.gene33748:CDS |
| GCGGAAGTGATTGTGACGTG+GGG | 0.650849 | 4.4:-23407939 | MS.gene33748:CDS |
| TGGCAGCGATCCTGCCTCGG+GGG | 0.651961 | 4.4:-23403531 | MS.gene33748:CDS |
| ATGGCAGCGATCCTGCCTCG+GGG | 0.654156 | 4.4:-23403532 | MS.gene33748:CDS |
| CTGTATATGAAGGACATGGA+GGG | 0.672772 | 4.4:-23405002 | MS.gene33748:CDS |
| GCAGTTAATCCAGAGACACA+TGG | 0.675440 | 4.4:-23403840 | MS.gene33748:CDS |
| ACTGTATATGAAGGACATGG+AGG | 0.676971 | 4.4:-23405003 | MS.gene33748:CDS |
| CACGTGTACGAAGATGGGAG+CGG | 0.678942 | 4.4:-23407958 | None:intergenic |
| CGGAAGTGATTGTGACGTGG+GGG | 0.689342 | 4.4:-23407938 | MS.gene33748:CDS |
| TGATTGGTCCGTCGTCGCGG+CGG | 0.715637 | 4.4:-23407865 | MS.gene33748:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAATATTTTTTTTA+AGG | + | chr4.4:23403782-23403801 | None:intergenic | 0.0% |
| !! | AAAATGCTAAAATATATTAA+TGG | - | chr4.4:23404407-23404426 | MS.gene33748:intron | 10.0% |
| !! | AACATATTTAAATAAAAAGA+TGG | - | chr4.4:23404741-23404760 | MS.gene33748:CDS | 10.0% |
| !! | ATTCAAACATAATTTAATAT+TGG | - | chr4.4:23403580-23403599 | MS.gene33748:CDS | 10.0% |
| !! | TAAAAAAAAAAAAACTATGA+CGG | + | chr4.4:23404560-23404579 | None:intergenic | 10.0% |
| !!! | CATAGTTTTTTTTTTTTTAT+TGG | - | chr4.4:23404561-23404580 | MS.gene33748:intron | 10.0% |
| !!! | TAATGAAATATTTCTATTTT+AGG | + | chr4.4:23407001-23407020 | None:intergenic | 10.0% |
| !!! | TCTTTTTATTTAAATATGTT+AGG | + | chr4.4:23404741-23404760 | None:intergenic | 10.0% |
| !!! | TTTTTATCATAAACTAAATT+GGG | + | chr4.4:23403741-23403760 | None:intergenic | 10.0% |
| !!! | TTTTTTATCATAAACTAAAT+TGG | + | chr4.4:23403742-23403761 | None:intergenic | 10.0% |
| !! | AATTTGGATGATTATAAATT+GGG | - | chr4.4:23406936-23406955 | MS.gene33748:intron | 15.0% |
| !! | AGATATAGTTGAAATTTATA+AGG | + | chr4.4:23407142-23407161 | None:intergenic | 15.0% |
| !! | CATTGTATTATATGATAATA+TGG | - | chr4.4:23405352-23405371 | MS.gene33748:CDS | 15.0% |
| !! | GATATAGTTGAAATTTATAA+GGG | + | chr4.4:23407141-23407160 | None:intergenic | 15.0% |
| !! | TTATTGAATTGAATTGAATA+TGG | - | chr4.4:23404113-23404132 | MS.gene33748:intron | 15.0% |
| !!! | ATAATGTTTTTGATGATAAT+AGG | - | chr4.4:23406652-23406671 | MS.gene33748:intron | 15.0% |
| !!! | ATTTTTCATTCATTTTCAAA+TGG | - | chr4.4:23404437-23404456 | MS.gene33748:intron | 15.0% |
| !!! | TACTATTATGTTTCTATATT+TGG | - | chr4.4:23406890-23406909 | MS.gene33748:intron | 15.0% |
| !!! | TTTTTCATTCATTTTCAAAT+GGG | - | chr4.4:23404438-23404457 | MS.gene33748:intron | 15.0% |
| !! | AAAACTGAAAAATCAACTAA+AGG | + | chr4.4:23406623-23406642 | None:intergenic | 20.0% |
| !! | AAACTGAAAAATCAACTAAA+GGG | + | chr4.4:23406622-23406641 | None:intergenic | 20.0% |
| !! | AATAAAATCAACAGTTGAAA+AGG | + | chr4.4:23405089-23405108 | None:intergenic | 20.0% |
| !! | ACCATGTAATAATAATGTAA+CGG | + | chr4.4:23403620-23403639 | None:intergenic | 20.0% |
| !! | ATACAACAAATTGAATAAAG+TGG | + | chr4.4:23404254-23404273 | None:intergenic | 20.0% |
| !! | ATCATTATTAAACACCAATT+TGG | - | chr4.4:23406920-23406939 | MS.gene33748:intron | 20.0% |
| !! | ATTTAACTCGTTATAATAGA+GGG | + | chr4.4:23403880-23403899 | None:intergenic | 20.0% |
| !! | CAATTTATAATCATCCAAAT+TGG | + | chr4.4:23406937-23406956 | None:intergenic | 20.0% |
| !! | CAATTTGGATGATTATAAAT+TGG | - | chr4.4:23406935-23406954 | MS.gene33748:intron | 20.0% |
| !! | CATTATATCATATATGCATA+TGG | - | chr4.4:23404274-23404293 | MS.gene33748:intron | 20.0% |
| !! | TATCATCAAAAACATTATTG+AGG | + | chr4.4:23406650-23406669 | None:intergenic | 20.0% |
| !! | TATTAAAGATGAAATGCAAA+TGG | + | chr4.4:23406693-23406712 | None:intergenic | 20.0% |
| !!! | CAAATGTAGAAACTTTTTAT+TGG | + | chr4.4:23407079-23407098 | None:intergenic | 20.0% |
| !!! | GTTTATTTTGTTCCTAAATT+TGG | - | chr4.4:23405055-23405074 | MS.gene33748:CDS | 20.0% |
| !!! | TATTTTTTTTCTTCCACATT+AGG | - | chr4.4:23406715-23406734 | MS.gene33748:intron | 20.0% |
| !!! | TTGTTCTAAGTATTTGTTAA+CGG | - | chr4.4:23404325-23404344 | MS.gene33748:intron | 20.0% |
| !!! | TTTTCCAAAATAAGTTTGTT+TGG | + | chr4.4:23406824-23406843 | None:intergenic | 20.0% |
| !!! | TTTTCGTCAATGTAAATATA+GGG | - | chr4.4:23407184-23407203 | MS.gene33748:intron | 20.0% |
| !!! | TTTTTCGTCAATGTAAATAT+AGG | - | chr4.4:23407183-23407202 | MS.gene33748:intron | 20.0% |
| ! | AAATGAAGGAAAAGAAAAGA+CGG | - | chr4.4:23407930-23407949 | MS.gene33748:CDS | 25.0% |
| ! | ACAAAATAAACCTAACAAGA+AGG | + | chr4.4:23405046-23405065 | None:intergenic | 25.0% |
| ! | ACAAACATTTCTAAGTTCTA+AGG | - | chr4.4:23404695-23404714 | MS.gene33748:intron | 25.0% |
| ! | ACATTAGGCAATGAAAAATT+TGG | - | chr4.4:23406730-23406749 | MS.gene33748:intron | 25.0% |
| ! | ACCGTTACATTATTATTACA+TGG | - | chr4.4:23403616-23403635 | MS.gene33748:CDS | 25.0% |
| ! | AGAAATCAGAAGATTCAATT+GGG | - | chr4.4:23405440-23405459 | MS.gene33748:CDS | 25.0% |
| ! | AGATTCAAACCAAGAATAAA+AGG | + | chr4.4:23407224-23407243 | None:intergenic | 25.0% |
| ! | AGTGGAATATTATATTACCT+CGG | + | chr4.4:23403503-23403522 | None:intergenic | 25.0% |
| ! | AGTTTAATGAATTGTCAATC+AGG | + | chr4.4:23403646-23403665 | None:intergenic | 25.0% |
| ! | ATAACTTAGCATAGTAATTG+AGG | + | chr4.4:23404513-23404532 | None:intergenic | 25.0% |
| ! | ATTACTATGCTAAGTTATGT+TGG | - | chr4.4:23404515-23404534 | MS.gene33748:intron | 25.0% |
| ! | ATTCAAAACTTTCTCATGTT+CGG | + | chr4.4:23405989-23406008 | None:intergenic | 25.0% |
| ! | CATGTGGTTAAATAAAAAGA+TGG | - | chr4.4:23404823-23404842 | MS.gene33748:CDS | 25.0% |
| ! | CTAAATCTCAATTGTTTCAT+AGG | - | chr4.4:23404658-23404677 | MS.gene33748:intron | 25.0% |
| ! | GAAATAAAGAATGATAAGAG+TGG | + | chr4.4:23404984-23405003 | None:intergenic | 25.0% |
| ! | GATTTAACTCGTTATAATAG+AGG | + | chr4.4:23403881-23403900 | None:intergenic | 25.0% |
| ! | TACAATGAGATATACTATAC+AGG | + | chr4.4:23405339-23405358 | None:intergenic | 25.0% |
| ! | TATTGTCAAAGAAAAACTGA+CGG | - | chr4.4:23407634-23407653 | MS.gene33748:intron | 25.0% |
| ! | TTATTATTGCTCACATTCTT+CGG | + | chr4.4:23404053-23404072 | None:intergenic | 25.0% |
| ! | TTCATTTCCTTCATAAGATT+CGG | + | chr4.4:23407917-23407936 | None:intergenic | 25.0% |
| !! | AAATTTTTCATTGCCTAATG+TGG | + | chr4.4:23406731-23406750 | None:intergenic | 25.0% |
| !! | TCTTTTGATCCTTTTATTCT+TGG | - | chr4.4:23407212-23407231 | MS.gene33748:intron | 25.0% |
| !! | TGAACCAAACAAACTTATTT+TGG | - | chr4.4:23406817-23406836 | MS.gene33748:intron | 25.0% |
| !! | TTGTTTAAATTTTCCCAACT+TGG | - | chr4.4:23405215-23405234 | MS.gene33748:CDS | 25.0% |
| !!! | AACAAAAAGAGTGTTCTATT+TGG | - | chr4.4:23404163-23404182 | MS.gene33748:intron | 25.0% |
| !!! | ACATGAAACTAGTTTTTGTT+TGG | + | chr4.4:23406860-23406879 | None:intergenic | 25.0% |
| !!! | CATCTTTTTATTTAACCACA+TGG | + | chr4.4:23404825-23404844 | None:intergenic | 25.0% |
| !!! | GATTCTGTTTTGGAAATTAA+AGG | - | chr4.4:23406537-23406556 | MS.gene33748:intron | 25.0% |
| !!! | TAGTGAATTATCATTTTTGC+AGG | - | chr4.4:23405114-23405133 | MS.gene33748:CDS | 25.0% |
| !!! | TTTTCCAAAATTAGTCTGTT+TGG | + | chr4.4:23406780-23406799 | None:intergenic | 25.0% |
| AAAATTGTGTTCTCTTGACA+AGG | - | chr4.4:23403991-23404010 | MS.gene33748:intron | 30.0% | |
| ACTCGCTTCATTAATATTTC+TGG | + | chr4.4:23406370-23406389 | None:intergenic | 30.0% | |
| ATATATGCATATGGTTGTTG+AGG | - | chr4.4:23404283-23404302 | MS.gene33748:intron | 30.0% | |
| ATGTGCTTAAAATAGAGGTT+TGG | + | chr4.4:23404351-23404370 | None:intergenic | 30.0% | |
| CTGTTGCAATTCTTCATATT+TGG | + | chr4.4:23405149-23405168 | None:intergenic | 30.0% | |
| GAATCTTATGAAGGAAATGA+AGG | - | chr4.4:23407916-23407935 | MS.gene33748:CDS | 30.0% | |
| GACATAATCTCAGCTTAAAA+AGG | + | chr4.4:23405488-23405507 | None:intergenic | 30.0% | |
| GAGAAATCAGAAGATTCAAT+TGG | - | chr4.4:23405439-23405458 | MS.gene33748:CDS | 30.0% | |
| GTGGAATATTATATTACCTC+GGG | + | chr4.4:23403502-23403521 | None:intergenic | 30.0% | |
| TAAATTGCAAGTCTCTATTC+TGG | - | chr4.4:23403924-23403943 | MS.gene33748:intron | 30.0% | |
| TGTGTGTAAACCTATAGATT+TGG | + | chr4.4:23405579-23405598 | None:intergenic | 30.0% | |
| TTAAAGCAATGCATGATGTA+TGG | - | chr4.4:23404140-23404159 | MS.gene33748:intron | 30.0% | |
| TTAATGAATTGTCAATCAGG+AGG | + | chr4.4:23403643-23403662 | None:intergenic | 30.0% | |
| TTCTACTAAAGAGTTGTCAA+AGG | - | chr4.4:23405846-23405865 | MS.gene33748:intron | 30.0% | |
| TTGAAAGAGACTGTATATGA+AGG | - | chr4.4:23406291-23406310 | MS.gene33748:intron | 30.0% | |
| TTTGCGTATACAATGGTTAT+GGG | - | chr4.4:23404195-23404214 | MS.gene33748:intron | 30.0% | |
| ! | ACATTAATCTTCTGGTTACA+AGG | + | chr4.4:23407737-23407756 | None:intergenic | 30.0% |
| ! | ATCAGAGTAAAAACCCATTT+TGG | - | chr4.4:23403695-23403714 | MS.gene33748:CDS | 30.0% |
| ! | CAACAAAACAATTGATTCAG+TGG | - | chr4.4:23407514-23407533 | MS.gene33748:intron | 30.0% |
| ! | CATTAATCTTCTGGTTACAA+GGG | + | chr4.4:23407736-23407755 | None:intergenic | 30.0% |
| ! | CTAACAGCTTGATTTTGTTA+GGG | - | chr4.4:23403900-23403919 | MS.gene33748:intron | 30.0% |
| ! | CTCTATTCTGGCTATTAATT+CGG | - | chr4.4:23403936-23403955 | MS.gene33748:intron | 30.0% |
| ! | TAACTGTACATCTTTGTTTC+AGG | - | chr4.4:23405695-23405714 | MS.gene33748:intron | 30.0% |
| ! | TCTAACAGCTTGATTTTGTT+AGG | - | chr4.4:23403899-23403918 | MS.gene33748:intron | 30.0% |
| ! | TGAACCAAACAGACTAATTT+TGG | - | chr4.4:23406773-23406792 | MS.gene33748:intron | 30.0% |
| ! | TTTTGCGTATACAATGGTTA+TGG | - | chr4.4:23404194-23404213 | MS.gene33748:intron | 30.0% |
| !! | AAACCTCTATTTTAAGCACA+TGG | - | chr4.4:23404350-23404369 | MS.gene33748:intron | 30.0% |
| !! | ATTTTTCAATTGATGTGTCC+CGG | - | chr4.4:23406403-23406422 | MS.gene33748:intron | 30.0% |
| !!! | AGTTCTAAGGAACTTTTCAT+TGG | - | chr4.4:23404708-23404727 | MS.gene33748:intron | 30.0% |
| !!! | ATGGAGGGTGTTTTAAAAAA+AGG | - | chr4.4:23406316-23406335 | MS.gene33748:intron | 30.0% |
| AAAAAGATGTACTGCCAAGT+TGG | + | chr4.4:23405232-23405251 | None:intergenic | 35.0% | |
| AAAAGAAAAGACGGAGAACT+AGG | - | chr4.4:23407939-23407958 | MS.gene33748:CDS | 35.0% | |
| AAAAGATGTACTGCCAAGTT+GGG | + | chr4.4:23405231-23405250 | None:intergenic | 35.0% | |
| AAAGATGGTGTATAACCATG+TGG | - | chr4.4:23404756-23404775 | MS.gene33748:CDS | 35.0% | |
| AACACGAACTTGAAAAAGGA+TGG | - | chr4.4:23406489-23406508 | MS.gene33748:intron | 35.0% | |
| AAGCCATGTGCTTAAAATAG+AGG | + | chr4.4:23404356-23404375 | None:intergenic | 35.0% | |
| AAGGCATGTGTTCCAAATTT+AGG | + | chr4.4:23405070-23405089 | None:intergenic | 35.0% | |
| AATAGAGGGACTAATGTGTT+CGG | + | chr4.4:23403866-23403885 | None:intergenic | 35.0% | |
| ACATGGACTTTGACACTATA+AGG | - | chr4.4:23407480-23407499 | MS.gene33748:intron | 35.0% | |
| ACATGTTCCTTCACAGAAAT+TGG | - | chr4.4:23406083-23406102 | MS.gene33748:intron | 35.0% | |
| ACTAAAGAGTTGTCAAAGGA+TGG | - | chr4.4:23405850-23405869 | MS.gene33748:intron | 35.0% | |
| ACTCTCTCTAATTTCTGTGA+AGG | + | chr4.4:23405820-23405839 | None:intergenic | 35.0% | |
| AGATTTCTATGATCCACTGT+TGG | - | chr4.4:23405649-23405668 | MS.gene33748:intron | 35.0% | |
| ATGATAATATGGCACTGCTA+GGG | - | chr4.4:23405363-23405382 | MS.gene33748:CDS | 35.0% | |
| CCAGAAGATTAATGTTGCAA+AGG | - | chr4.4:23407742-23407761 | MS.gene33748:intron | 35.0% | |
| CCTTTGCAACATTAATCTTC+TGG | + | chr4.4:23407745-23407764 | None:intergenic | 35.0% | |
| CTAAAGAGTTGTCAAAGGAT+GGG | - | chr4.4:23405851-23405870 | MS.gene33748:intron | 35.0% | |
| GAAATGTCGACCAAATCTAT+AGG | - | chr4.4:23405566-23405585 | MS.gene33748:CDS | 35.0% | |
| GTAGTGCAGACTTATATTGA+CGG | + | chr4.4:23407604-23407623 | None:intergenic | 35.0% | |
| TAAACCTAACAAGAAGGCTT+TGG | + | chr4.4:23405040-23405059 | None:intergenic | 35.0% | |
| TAAAGAGAATTCTCCGTCTT+CGG | - | chr4.4:23407832-23407851 | MS.gene33748:CDS | 35.0% | |
| TAGTGCAGACTTATATTGAC+GGG | + | chr4.4:23407603-23407622 | None:intergenic | 35.0% | |
| TATGATAATATGGCACTGCT+AGG | - | chr4.4:23405362-23405381 | MS.gene33748:CDS | 35.0% | |
| TCATTGAGACATAAACCACA+TGG | + | chr4.4:23404907-23404926 | None:intergenic | 35.0% | |
| TGCAAATGGCAATAAACTAG+TGG | + | chr4.4:23406679-23406698 | None:intergenic | 35.0% | |
| TGTGAAGGAACATCTAATTC+TGG | + | chr4.4:23405805-23405824 | None:intergenic | 35.0% | |
| TTACACATCAAGAAAGCTGT+CGG | - | chr4.4:23407863-23407882 | MS.gene33748:CDS | 35.0% | |
| TTCAACTAAAGAGACGTCAA+AGG | - | chr4.4:23406119-23406138 | MS.gene33748:intron | 35.0% | |
| TTCATGAGACCAGTTTGTAT+CGG | + | chr4.4:23405905-23405924 | None:intergenic | 35.0% | |
| TTTATGTCTCAATGAGTGTG+CGG | - | chr4.4:23404912-23404931 | MS.gene33748:CDS | 35.0% | |
| ! | AACGTGTTTTGCGTATACAA+TGG | - | chr4.4:23404188-23404207 | MS.gene33748:intron | 35.0% |
| ! | ATAAGTTGACAGATACAGCT+GGG | - | chr4.4:23406013-23406032 | MS.gene33748:intron | 35.0% |
| ! | ATCCACTGTTGGATTTTCAT+CGG | - | chr4.4:23405660-23405679 | MS.gene33748:intron | 35.0% |
| ! | ATTCTTGAGACCAGTTTTTC+TGG | + | chr4.4:23406179-23406198 | None:intergenic | 35.0% |
| ! | GGCGATTTTAGATTCTGTTT+TGG | - | chr4.4:23406527-23406546 | MS.gene33748:intron | 35.0% |
| ! | TGCTACTTACATTGATGAGA+TGG | - | chr4.4:23404950-23404969 | MS.gene33748:CDS | 35.0% |
| ! | TTCTTGAGACCAGTTTTTCT+GGG | + | chr4.4:23406178-23406197 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTAA+AGG | + | chr4.4:23407117-23407136 | None:intergenic | 35.0% |
| !! | ACTCATTAACTTGTGCCTTT+AGG | - | chr4.4:23407099-23407118 | MS.gene33748:intron | 35.0% |
| !! | CATGTTAACTTGTGTCCTAA+GGG | - | chr4.4:23406960-23406979 | MS.gene33748:intron | 35.0% |
| !! | CTCATTAACTTGTGCCTTTA+GGG | - | chr4.4:23407100-23407119 | MS.gene33748:intron | 35.0% |
| !! | TCATGTTAACTTGTGTCCTA+AGG | - | chr4.4:23406959-23406978 | MS.gene33748:intron | 35.0% |
| !! | TCTATTTTAAGCACATGGCT+TGG | - | chr4.4:23404355-23404374 | MS.gene33748:intron | 35.0% |
| !!! | GGGTGTTTTAAAAAAAGGAG+AGG | - | chr4.4:23406321-23406340 | MS.gene33748:intron | 35.0% |
| !!! | TGTTGGATTTTCATCGGTTT+GGG | - | chr4.4:23405666-23405685 | MS.gene33748:intron | 35.0% |
| AAAGGAGAGGAAAGAGAAAG+AGG | - | chr4.4:23406334-23406353 | MS.gene33748:intron | 40.0% | |
| AACCGATGAAAATCCAACAG+TGG | + | chr4.4:23405665-23405684 | None:intergenic | 40.0% | |
| AAGAAAAACTGACGGAGAAC+AGG | - | chr4.4:23407642-23407661 | MS.gene33748:intron | 40.0% | |
| AAGTGGCGAACCAAAACAAT+TGG | + | chr4.4:23404237-23404256 | None:intergenic | 40.0% | |
| ACACTTGGGACTTTCAAAGA+AGG | + | chr4.4:23407710-23407729 | None:intergenic | 40.0% | |
| ACCAACAATCACAAACCACA+TGG | + | chr4.4:23404774-23404793 | None:intergenic | 40.0% | |
| ACTAAAGAGACGTCAAAGGA+TGG | - | chr4.4:23406123-23406142 | MS.gene33748:intron | 40.0% | |
| ACTCTCTCCAATTTCTGTGA+AGG | + | chr4.4:23406093-23406112 | None:intergenic | 40.0% | |
| ACTGTATATGAAGGACATGG+AGG | - | chr4.4:23406300-23406319 | MS.gene33748:intron | 40.0% | |
| ATCAAAGCTTGAATCCCTCA+AGG | - | chr4.4:23405726-23405745 | MS.gene33748:intron | 40.0% | |
| ATCAACTAAAGGGAGTGAAC+AGG | + | chr4.4:23406612-23406631 | None:intergenic | 40.0% | |
| ATGTCTTCAGAAGACATTGC+TGG | + | chr4.4:23405937-23405956 | None:intergenic | 40.0% | |
| ATTGCTTAACATGTGCCCTT+AGG | + | chr4.4:23406978-23406997 | None:intergenic | 40.0% | |
| CAAATCTTCTGGTGTAACTG+AGG | - | chr4.4:23406464-23406483 | MS.gene33748:intron | 40.0% | |
| CAAGAGCAAAGGACCAAAAT+GGG | + | chr4.4:23403711-23403730 | None:intergenic | 40.0% | |
| CACATCAAACCCAGAAAAAC+TGG | - | chr4.4:23406166-23406185 | MS.gene33748:CDS | 40.0% | |
| CACATCAAACCGATACAAAC+TGG | - | chr4.4:23405893-23405912 | MS.gene33748:CDS | 40.0% | |
| CTAAAGAGACGTCAAAGGAT+GGG | - | chr4.4:23406124-23406143 | MS.gene33748:intron | 40.0% | |
| CTGTATATGAAGGACATGGA+GGG | - | chr4.4:23406301-23406320 | MS.gene33748:intron | 40.0% | |
| CTTGTTGACAACAACTCAGT+TGG | - | chr4.4:23405778-23405797 | MS.gene33748:intron | 40.0% | |
| GACAGCTTTCTTGATGTGTA+AGG | + | chr4.4:23407864-23407883 | None:intergenic | 40.0% | |
| GAGACTGTATATGAAGGACA+TGG | - | chr4.4:23406297-23406316 | MS.gene33748:intron | 40.0% | |
| GGAGAACACGAACTTGAAAA+AGG | - | chr4.4:23406485-23406504 | MS.gene33748:intron | 40.0% | |
| GGATGGAACGAAATATCTGA+TGG | - | chr4.4:23406506-23406525 | MS.gene33748:intron | 40.0% | |
| TATGCATATGGTTGTTGAGG+TGG | - | chr4.4:23404286-23404305 | MS.gene33748:intron | 40.0% | |
| TATGCCAAAGCCTTCTTGTT+AGG | - | chr4.4:23405033-23405052 | MS.gene33748:CDS | 40.0% | |
| TATTACCTCGGGTGTAATAG+CGG | + | chr4.4:23403491-23403510 | None:intergenic | 40.0% | |
| TCAGAGTCTCTATAACCATG+TGG | - | chr4.4:23404807-23404826 | MS.gene33748:CDS | 40.0% | |
| TCTTTACTACCACCAGTACT+AGG | + | chr4.4:23407818-23407837 | None:intergenic | 40.0% | |
| TGCAACTCCGAATCTTATGA+AGG | - | chr4.4:23407907-23407926 | MS.gene33748:CDS | 40.0% | |
| TGGTAGAACTTTCTTTCAGC+CGG | + | chr4.4:23406425-23406444 | None:intergenic | 40.0% | |
| TGTAAGGATTTCACCGAAGA+CGG | + | chr4.4:23407848-23407867 | None:intergenic | 40.0% | |
| TGTGAAGGAACATGTGATTC+TGG | + | chr4.4:23406078-23406097 | None:intergenic | 40.0% | |
| TTCATAAGATTCGGAGTTGC+AGG | + | chr4.4:23407908-23407927 | None:intergenic | 40.0% | |
| ! | ACCATGTGGTTTGTGATTGT+TGG | - | chr4.4:23404770-23404789 | MS.gene33748:CDS | 40.0% |
| ! | AGAACACGAGCATGTGTTTT+AGG | + | chr4.4:23404385-23404404 | None:intergenic | 40.0% |
| ! | AGCAATGTCTTCTGAAGACA+TGG | - | chr4.4:23405936-23405955 | MS.gene33748:intron | 40.0% |
| ! | CAGGATCTTTTACACATACC+TGG | + | chr4.4:23406593-23406612 | None:intergenic | 40.0% |
| ! | CTTATATTGACGGGTGTTCT+TGG | + | chr4.4:23407594-23407613 | None:intergenic | 40.0% |
| ! | GATAAGTTGACAGATACAGC+TGG | - | chr4.4:23406012-23406031 | MS.gene33748:intron | 40.0% |
| ! | GTAGAGATTTGCTCAAGGAA+TGG | - | chr4.4:23407382-23407401 | MS.gene33748:intron | 40.0% |
| ! | TAATCTTCTGGTTACAAGGG+CGG | + | chr4.4:23407733-23407752 | None:intergenic | 40.0% |
| ! | TTTGATAGCAGAAGCGACAA+AGG | - | chr4.4:23407435-23407454 | MS.gene33748:intron | 40.0% |
| !! | CATTTTGGTCCTTTGCTCTT+GGG | - | chr4.4:23403710-23403729 | MS.gene33748:CDS | 40.0% |
| !! | CTGTTGGATTTTCATCGGTT+TGG | - | chr4.4:23405665-23405684 | MS.gene33748:intron | 40.0% |
| AAAAACTGACGGAGAACAGG+AGG | - | chr4.4:23407645-23407664 | MS.gene33748:intron | 45.0% | |
| AAAGCCAAGAAGCCTAGTAC+TGG | - | chr4.4:23407803-23407822 | MS.gene33748:intron | 45.0% | |
| AAGTGTCATGCTGTCTTTCG+AGG | + | chr4.4:23405278-23405297 | None:intergenic | 45.0% | |
| AATGTTGCAAAGGTAGCCGA+TGG | - | chr4.4:23407752-23407771 | MS.gene33748:intron | 45.0% | |
| AGATTACGCCTGGTGTTTCA+GGG | - | chr4.4:23406232-23406251 | MS.gene33748:intron | 45.0% | |
| AGTGTCATGCTGTCTTTCGA+GGG | + | chr4.4:23405277-23405296 | None:intergenic | 45.0% | |
| CAGAAGACATTGCTGGAACT+TGG | + | chr4.4:23406203-23406222 | None:intergenic | 45.0% | |
| CCAAGAGCAAAGGACCAAAA+TGG | + | chr4.4:23403712-23403731 | None:intergenic | 45.0% | |
| CTCATTCTTGTCAGCCTTGA+GGG | + | chr4.4:23405743-23405762 | None:intergenic | 45.0% | |
| CTTTAGACCCACATTCTGAC+TGG | - | chr4.4:23404025-23404044 | MS.gene33748:intron | 45.0% | |
| GAAAGTTCTACCAGCAACTG+TGG | - | chr4.4:23406432-23406451 | MS.gene33748:intron | 45.0% | |
| GAATTGCAACAGCGCTATTC+AGG | - | chr4.4:23405157-23405176 | MS.gene33748:CDS | 45.0% | |
| GAGAGGAAAGAGAAAGAGGA+AGG | - | chr4.4:23406338-23406357 | MS.gene33748:intron | 45.0% | |
| GCAGTTAATCCAGAGACACA+TGG | - | chr4.4:23407463-23407482 | MS.gene33748:intron | 45.0% | |
| GGAGTAGAACAGCAAAGCAT+TGG | + | chr4.4:23407573-23407592 | None:intergenic | 45.0% | |
| GGTAGAACTTTCTTTCAGCC+GGG | + | chr4.4:23406424-23406443 | None:intergenic | 45.0% | |
| GGTGAGGTTGTCAAATCTTC+TGG | - | chr4.4:23406453-23406472 | MS.gene33748:intron | 45.0% | |
| TCAATAGACCCTGAAACACC+AGG | + | chr4.4:23405970-23405989 | None:intergenic | 45.0% | |
| TCTCATTCTTGTCAGCCTTG+AGG | + | chr4.4:23405744-23405763 | None:intergenic | 45.0% | |
| TGTCAAAGTCCATGTGTCTC+TGG | + | chr4.4:23407475-23407494 | None:intergenic | 45.0% | |
| TTCGGTTCCAGTCAGAATGT+GGG | + | chr4.4:23404035-23404054 | None:intergenic | 45.0% | |
| TTCTTGGTGGAGCTGTTATC+CGG | - | chr4.4:23403404-23403423 | MS.gene33748:CDS | 45.0% | |
| ! | AAACTGGTCTCATGAATGCC+AGG | - | chr4.4:23405909-23405928 | MS.gene33748:CDS | 45.0% |
| !! | CCATTTTGGTCCTTTGCTCT+TGG | - | chr4.4:23403709-23403728 | MS.gene33748:CDS | 45.0% |
| !! | GTAGAACAGCAAAGCATTGG+TGG | + | chr4.4:23407570-23407589 | None:intergenic | 45.0% |
| !! | TCAAAGGATGGGTTATCTGC+TGG | - | chr4.4:23406135-23406154 | MS.gene33748:intron | 45.0% |
| !! | TCACGTGGTGCCAATTGTTT+TGG | - | chr4.4:23404224-23404243 | MS.gene33748:intron | 45.0% |
| !! | ATAATAAATAAATAAAATAG+TGG | + | chr4.4:23403521-23403540 | None:intergenic | 5.0% |
| AAGGAGAAGGAGTTCTCCCT+CGG | + | chr4.4:23403468-23403487 | None:intergenic | 50.0% | |
| AATATGGCACTGCTAGGGCT+TGG | - | chr4.4:23405368-23405387 | MS.gene33748:CDS | 50.0% | |
| ACATGGGAGGAGCTTCTTCT+TGG | - | chr4.4:23403388-23403407 | MS.gene33748:CDS | 50.0% | |
| ACCACCAGTACTAGGCTTCT+TGG | + | chr4.4:23407810-23407829 | None:intergenic | 50.0% | |
| AGATCTCGCCTGGTGTTTCA+GGG | - | chr4.4:23405959-23405978 | MS.gene33748:intron | 50.0% | |
| AGCAGAGCTTAAGCGAGCTT+TGG | - | chr4.4:23405417-23405436 | MS.gene33748:CDS | 50.0% | |
| AGCGGAAGTGATTGTGACGT+GGG | - | chr4.4:23403363-23403382 | MS.gene33748:CDS | 50.0% | |
| CACATCAAGAAAGCTGTCGG+TGG | - | chr4.4:23407866-23407885 | MS.gene33748:CDS | 50.0% | |
| CAGAAGACATTGCTGGAACC+TGG | + | chr4.4:23405930-23405949 | None:intergenic | 50.0% | |
| CTGTCGTAAGCATGATAGCC+AGG | - | chr4.4:23406572-23406591 | MS.gene33748:intron | 50.0% | |
| CTTCGGTTCCAGTCAGAATG+TGG | + | chr4.4:23404036-23404055 | None:intergenic | 50.0% | |
| GAAGACATGGAGATTACGCC+TGG | - | chr4.4:23406222-23406241 | MS.gene33748:intron | 50.0% | |
| GAGATTACGCCTGGTGTTTC+AGG | - | chr4.4:23406231-23406250 | MS.gene33748:intron | 50.0% | |
| GGTTATGGGTAGCATTCACG+TGG | - | chr4.4:23404209-23404228 | MS.gene33748:intron | 50.0% | |
| TGGTCCTTTGCTCTTGGGTT+TGG | - | chr4.4:23403715-23403734 | MS.gene33748:CDS | 50.0% | |
| TTCTACCAGCAACTGTGGTG+AGG | - | chr4.4:23406437-23406456 | MS.gene33748:intron | 50.0% | |
| ! | GGCGAGTAGAGATTTGCTCA+AGG | - | chr4.4:23407377-23407396 | MS.gene33748:intron | 50.0% |
| ! | GGTGTAATAGCGGAAGGAGA+AGG | + | chr4.4:23403481-23403500 | None:intergenic | 50.0% |
| !! | CAAAGGATGGGCTATCTGCT+GGG | - | chr4.4:23405863-23405882 | MS.gene33748:intron | 50.0% |
| !! | TCAAAGGATGGGCTATCTGC+TGG | - | chr4.4:23405862-23405881 | MS.gene33748:intron | 50.0% |
| CGGAAGTGATTGTGACGTGG+GGG | - | chr4.4:23403365-23403384 | MS.gene33748:CDS | 55.0% | |
| GAAGACATGGAGATCTCGCC+TGG | - | chr4.4:23405949-23405968 | MS.gene33748:intron | 55.0% | |
| GACAACCTCACCACAGTTGC+TGG | + | chr4.4:23406445-23406464 | None:intergenic | 55.0% | |
| GAGATCTCGCCTGGTGTTTC+AGG | - | chr4.4:23405958-23405977 | MS.gene33748:intron | 55.0% | |
| GAGCGGAAGTGATTGTGACG+TGG | - | chr4.4:23403362-23403381 | MS.gene33748:CDS | 55.0% | |
| GATTGTGACGTGGGGGACAT+GGG | - | chr4.4:23403372-23403391 | MS.gene33748:CDS | 55.0% | |
| GCGGAAGTGATTGTGACGTG+GGG | - | chr4.4:23403364-23403383 | MS.gene33748:CDS | 55.0% | |
| GGTTACAAGGGCGGACACTT+GGG | + | chr4.4:23407724-23407743 | None:intergenic | 55.0% | |
| TCCTTCCGCTATTACACCCG+AGG | - | chr4.4:23403483-23403502 | MS.gene33748:CDS | 55.0% | |
| TCGGTTGACCCTGAAACACC+AGG | + | chr4.4:23406243-23406262 | None:intergenic | 55.0% | |
| TGATTGTGACGTGGGGGACA+TGG | - | chr4.4:23403371-23403390 | MS.gene33748:CDS | 55.0% | |
| TGGGAGGAGCTTCTTCTTGG+TGG | - | chr4.4:23403391-23403410 | MS.gene33748:CDS | 55.0% | |
| TGGGCCAAACCCAAGAGCAA+AGG | + | chr4.4:23403722-23403741 | None:intergenic | 55.0% | |
| TGGTTACAAGGGCGGACACT+TGG | + | chr4.4:23407725-23407744 | None:intergenic | 55.0% | |
| ! | ACCTCGGGTGTAATAGCGGA+AGG | + | chr4.4:23403487-23403506 | None:intergenic | 55.0% |
| ! | CACTGCTAGGGCTTGGTATG+AGG | - | chr4.4:23405375-23405394 | MS.gene33748:CDS | 55.0% |
| ! | GCCAAGAAGCCTAGTACTGG+TGG | - | chr4.4:23407806-23407825 | MS.gene33748:intron | 55.0% |
| ! | TTATTTGAGACCCCCGAGGC+AGG | + | chr4.4:23407785-23407804 | None:intergenic | 55.0% |
| !! | GGCTTTATTTGAGACCCCCG+AGG | + | chr4.4:23407789-23407808 | None:intergenic | 55.0% |
| ACCAATCACCAGTGCCGTGC+CGG | + | chr4.4:23403426-23403445 | None:intergenic | 60.0% | |
| GGTGGAGCTGTTATCCGGCA+CGG | - | chr4.4:23403409-23403428 | MS.gene33748:CDS | 60.0% | |
| ! | TGGTGATTGGTCCGTCGTCG+CGG | - | chr4.4:23403435-23403454 | MS.gene33748:CDS | 60.0% |
| ATGGCAGCGATCCTGCCTCG+GGG | - | chr4.4:23407771-23407790 | MS.gene33748:intron | 65.0% | |
| CGAGGCAGGATCGCTGCCAT+CGG | + | chr4.4:23407771-23407790 | None:intergenic | 65.0% | |
| CGATGGCAGCGATCCTGCCT+CGG | - | chr4.4:23407769-23407788 | MS.gene33748:intron | 65.0% | |
| GATGGCAGCGATCCTGCCTC+GGG | - | chr4.4:23407770-23407789 | MS.gene33748:intron | 65.0% | |
| GCTGTTATCCGGCACGGCAC+TGG | - | chr4.4:23403415-23403434 | MS.gene33748:CDS | 65.0% | |
| TGTGACGTGGGGGACATGGG+AGG | - | chr4.4:23403375-23403394 | MS.gene33748:CDS | 65.0% | |
| ! | TGATTGGTCCGTCGTCGCGG+CGG | - | chr4.4:23403438-23403457 | MS.gene33748:CDS | 65.0% |
| !! | TCCGGCACGGCACTGGTGAT+TGG | - | chr4.4:23403422-23403441 | MS.gene33748:CDS | 65.0% |
| TGGCAGCGATCCTGCCTCGG+GGG | - | chr4.4:23407772-23407791 | MS.gene33748:intron | 70.0% | |
| TCGGAGCTCCGCCGCGACGA+CGG | + | chr4.4:23403449-23403468 | None:intergenic | 75.0% | |
| TCGTCGCGGCGGAGCTCCGA+GGG | - | chr4.4:23403449-23403468 | MS.gene33748:CDS | 75.0% | |
| ! | GTCGTCGCGGCGGAGCTCCG+AGG | - | chr4.4:23403448-23403467 | MS.gene33748:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23403358 | 23407967 | 23403358 | ID=MS.gene33748 |
| chr4.4 | mRNA | 23403358 | 23407967 | 23403358 | ID=MS.gene33748.t1;Parent=MS.gene33748 |
| chr4.4 | exon | 23407821 | 23407967 | 23407821 | ID=MS.gene33748.t1.exon1;Parent=MS.gene33748.t1 |
| chr4.4 | CDS | 23407821 | 23407967 | 23407821 | ID=cds.MS.gene33748.t1;Parent=MS.gene33748.t1 |
| chr4.4 | exon | 23406140 | 23406189 | 23406140 | ID=MS.gene33748.t1.exon2;Parent=MS.gene33748.t1 |
| chr4.4 | CDS | 23406140 | 23406189 | 23406140 | ID=cds.MS.gene33748.t1;Parent=MS.gene33748.t1 |
| chr4.4 | exon | 23405864 | 23405941 | 23405864 | ID=MS.gene33748.t1.exon3;Parent=MS.gene33748.t1 |
| chr4.4 | CDS | 23405864 | 23405941 | 23405864 | ID=cds.MS.gene33748.t1;Parent=MS.gene33748.t1 |
| chr4.4 | exon | 23404732 | 23405608 | 23404732 | ID=MS.gene33748.t1.exon4;Parent=MS.gene33748.t1 |
| chr4.4 | CDS | 23404732 | 23405608 | 23404732 | ID=cds.MS.gene33748.t1;Parent=MS.gene33748.t1 |
| chr4.4 | exon | 23403358 | 23403879 | 23403358 | ID=MS.gene33748.t1.exon5;Parent=MS.gene33748.t1 |
| chr4.4 | CDS | 23403358 | 23403879 | 23403358 | ID=cds.MS.gene33748.t1;Parent=MS.gene33748.t1 |
| Gene Sequence |
| Protein sequence |
