AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33762

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33762.t1 MTR_4g089135 95.977 348 9 3 1 347 1 344 0.0 681
MS.gene33762.t1 MTR_2g080010 53.050 377 121 12 1 346 1 352 1.55e-118 347
MS.gene33762.t1 MTR_2157s0010 54.826 259 88 6 13 260 6 246 2.53e-87 264
MS.gene33762.t1 MTR_7g085220 63.492 189 44 2 10 191 3 173 2.59e-84 259
MS.gene33762.t1 MTR_7g100990 51.639 244 95 4 14 255 10 232 3.92e-79 245
MS.gene33762.t1 MTR_2g093810 63.636 176 46 2 15 190 14 171 6.32e-78 242
MS.gene33762.t1 MTR_5g041940 62.500 176 46 2 14 189 2 157 1.28e-77 239
MS.gene33762.t1 MTR_3g088110 66.292 178 36 3 14 190 6 160 1.15e-76 237
MS.gene33762.t1 MTR_4g081870 62.857 175 45 2 15 189 9 163 1.81e-76 236
MS.gene33762.t1 MTR_2g079990 64.835 182 40 4 15 196 16 173 1.05e-74 234
MS.gene33762.t1 MTR_2g079990 62.963 189 60 4 15 196 16 201 2.68e-74 234
MS.gene33762.t1 MTR_8g094580 58.824 204 58 6 14 213 6 187 2.33e-73 229
MS.gene33762.t1 MTR_8g059170 64.835 182 42 4 15 196 14 173 3.04e-73 230
MS.gene33762.t1 MTR_3g096920 59.788 189 46 4 14 195 6 171 4.07e-70 221
MS.gene33762.t1 MTR_3g096920 54.106 207 66 5 14 195 6 208 9.52e-65 208
MS.gene33762.t1 MTR_5g040420 43.220 236 113 4 15 245 14 233 8.82e-63 205
MS.gene33762.t1 MTR_6g011860 52.688 186 70 4 15 198 15 184 1.15e-61 202
MS.gene33762.t1 MTR_8g467490 50.857 175 73 1 17 191 16 177 1.88e-61 202
MS.gene33762.t1 MTR_7g005280 54.237 177 54 3 14 190 14 163 4.50e-58 189
MS.gene33762.t1 MTR_2g078700 50.847 177 67 1 14 190 22 178 1.50e-57 191
MS.gene33762.t1 MTR_6g084430 49.724 181 65 3 15 195 5 159 4.82e-56 186
MS.gene33762.t1 MTR_4g108760 48.295 176 69 2 15 190 17 170 1.12e-54 183
MS.gene33762.t1 MTR_2g064090 50.000 176 63 5 15 188 6 158 1.21e-54 182
MS.gene33762.t1 MTR_3g109340 49.432 176 66 2 15 190 22 174 3.70e-54 182
MS.gene33762.t1 MTR_3g109340 48.876 178 63 2 15 190 22 173 6.21e-54 181
MS.gene33762.t1 MTR_3g435150 49.432 176 67 2 15 190 16 169 1.60e-53 178
MS.gene33762.t1 MTR_5g012080 43.578 218 87 7 14 224 6 194 8.23e-53 178
MS.gene33762.t1 MTR_1g008740 48.315 178 62 3 15 188 13 164 1.23e-52 177
MS.gene33762.t1 MTR_1g008740 48.315 178 62 3 15 188 27 178 1.38e-52 177
MS.gene33762.t1 MTR_6g012670 40.773 233 101 5 14 234 19 226 1.61e-52 176
MS.gene33762.t1 MTR_4g134460 47.090 189 72 4 12 197 51 214 2.55e-52 179
MS.gene33762.t1 MTR_3g064580 46.445 211 81 6 15 223 6 186 2.80e-52 183
MS.gene33762.t1 MTR_6g032770 48.571 175 70 2 15 189 18 172 2.87e-52 177
MS.gene33762.t1 MTR_3g070030 48.023 177 71 4 15 191 19 174 1.15e-51 175
MS.gene33762.t1 MTR_4g036030 42.056 214 92 5 14 221 6 193 1.35e-51 174
MS.gene33762.t1 MTR_5g076850 48.969 194 70 5 15 206 6 172 1.91e-51 181
MS.gene33762.t1 MTR_6g477900 47.429 175 66 3 15 187 6 156 5.34e-51 170
MS.gene33762.t1 MTR_1g069805 45.455 176 70 2 15 190 10 159 9.11e-51 170
MS.gene33762.t1 MTR_5g090970 47.126 174 74 3 17 187 20 178 9.16e-51 171
MS.gene33762.t1 MTR_2g062730 44.134 179 72 3 15 190 10 163 1.96e-50 171
MS.gene33762.t1 MTR_7g085260 42.194 237 90 7 15 225 17 232 2.13e-50 172
MS.gene33762.t1 MTR_5g021710 43.590 195 74 5 1 192 1 162 2.72e-50 171
MS.gene33762.t1 MTR_5g090970 47.126 174 73 4 17 187 20 177 2.04e-49 168
MS.gene33762.t1 MTR_5g014300 53.425 146 61 2 15 153 6 151 2.27e-49 169
MS.gene33762.t1 MTR_4g101680 43.005 193 77 4 14 203 6 168 2.81e-49 169
MS.gene33762.t1 MTR_7g097090 46.199 171 66 2 15 185 10 154 4.47e-49 166
MS.gene33762.t1 MTR_2g068880 47.340 188 81 5 17 197 24 200 7.78e-49 166
MS.gene33762.t1 MTR_4g035590 42.233 206 89 4 15 217 8 186 8.56e-49 167
MS.gene33762.t1 MTR_8g076110 44.693 179 70 4 15 190 6 158 9.78e-49 166
MS.gene33762.t1 MTR_2g068920 43.458 214 100 6 17 227 23 218 1.26e-48 165
MS.gene33762.t1 MTR_1g096430 44.041 193 74 5 5 194 2 163 1.73e-48 166
MS.gene33762.t1 MTR_4g098630 54.676 139 60 2 15 150 6 144 1.09e-47 164
MS.gene33762.t1 MTR_7g011130 45.930 172 84 2 18 189 22 184 2.59e-47 164
MS.gene33762.t1 MTR_2g064470 43.158 190 83 3 15 204 11 175 2.72e-47 162
MS.gene33762.t1 MTR_3g116070 56.589 129 55 1 15 142 23 151 2.83e-47 164
MS.gene33762.t1 MTR_8g024480 41.711 187 91 5 6 189 6 177 3.58e-47 165
MS.gene33762.t1 MTR_8g099750 45.545 202 83 7 14 209 13 193 3.77e-47 159
MS.gene33762.t1 MTR_7g011120 44.633 177 79 4 15 189 8 167 9.64e-46 158
MS.gene33762.t1 MTR_3g098810 46.629 178 75 3 15 190 14 173 8.64e-45 154
MS.gene33762.t1 MTR_4g075980 42.246 187 79 4 5 190 6 164 2.97e-44 154
MS.gene33762.t1 MTR_1g090720 45.763 177 76 3 15 189 42 200 3.41e-44 158
MS.gene33762.t1 MTR_8g094580 53.896 154 45 6 64 213 2 133 1.19e-43 150
MS.gene33762.t1 MTR_3g096140 42.857 175 74 4 15 187 7 157 2.76e-43 151
MS.gene33762.t1 MTR_5g069030 46.369 179 70 4 15 191 25 179 8.84e-43 157
MS.gene33762.t1 MTR_3g098810 56.061 132 54 2 15 144 14 143 9.42e-43 146
MS.gene33762.t1 MTR_1g097300 53.435 131 57 2 17 145 21 149 1.05e-42 156
MS.gene33762.t1 MTR_3g096140 42.857 175 74 4 15 187 7 157 2.00e-42 151
MS.gene33762.t1 MTR_1g090723 44.068 177 72 4 17 190 10 162 2.51e-41 153
MS.gene33762.t1 MTR_0036s0150 44.944 178 68 5 17 190 7 158 6.95e-41 150
MS.gene33762.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 1.00e-40 150
MS.gene33762.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 1.11e-40 151
MS.gene33762.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 3.08e-40 149
MS.gene33762.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 3.59e-40 149
MS.gene33762.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 9.96e-40 147
MS.gene33762.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 1.15e-39 147
MS.gene33762.t1 MTR_3g093040 41.899 179 78 4 15 191 108 262 1.50e-39 142
MS.gene33762.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.50e-39 143
MS.gene33762.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.65e-39 145
MS.gene33762.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 3.42e-39 144
MS.gene33762.t1 MTR_8g023840 50.725 138 63 4 11 144 6 142 2.45e-38 141
MS.gene33762.t1 MTR_4g094302 39.884 173 80 2 15 187 11 159 1.66e-37 133
MS.gene33762.t1 MTR_3g070040 40.000 175 74 4 19 189 12 159 2.76e-37 137
MS.gene33762.t1 MTR_4g094302 48.438 128 58 1 15 142 11 130 4.21e-37 131
MS.gene33762.t1 MTR_8g093580 48.485 132 64 2 13 142 4 133 4.44e-37 139
MS.gene33762.t1 MTR_4g052620 39.423 208 95 7 15 213 5 190 5.89e-36 131
MS.gene33762.t1 MTR_8g023930 37.981 208 91 7 15 219 24 196 6.48e-34 130
MS.gene33762.t1 MTR_8g023860 46.923 130 65 3 14 140 11 139 6.89e-34 129
MS.gene33762.t1 MTR_3g096140 39.375 160 71 4 30 187 1 136 8.80e-33 125
MS.gene33762.t1 MTR_8g023900 45.714 140 67 4 13 144 186 324 1.13e-32 127
MS.gene33762.t1 MTR_8g023900 41.549 142 79 3 12 150 9 149 3.94e-31 122
MS.gene33762.t1 MTR_2g086690 36.681 229 108 9 16 229 5 211 1.13e-32 122
MS.gene33762.t1 MTR_7g105170 36.111 180 91 5 15 188 4 165 6.03e-31 118
MS.gene33762.t1 MTR_8g093790 39.306 173 61 6 15 187 10 138 6.80e-27 105
MS.gene33762.t1 MTR_7g070140 47.748 111 54 1 68 174 17 127 2.09e-26 102
MS.gene33762.t1 MTR_8g023880 35.897 195 76 7 15 192 7 169 1.32e-25 103
MS.gene33762.t1 MTR_3g096400 36.000 175 88 8 15 186 7 160 5.48e-23 95.5
MS.gene33762.t1 MTR_7g083370 36.620 142 80 7 13 151 8 142 1.15e-19 84.7
MS.gene33762.t1 MTR_7g083330 35.294 136 82 4 15 148 18 149 3.06e-19 84.7
MS.gene33762.t1 MTR_7g083360 34.074 135 83 4 15 147 10 140 3.65e-19 83.6
MS.gene33762.t1 MTR_1g087190 62.500 48 15 2 17 62 7 53 1.27e-12 62.4
MS.gene33762.t1 MTR_7g070150 32.759 116 46 3 106 214 1 91 2.94e-12 62.4
MS.gene33762.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.89e-11 65.5
MS.gene33762.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.89e-11 65.5
MS.gene33762.t1 MTR_4g078875 34.211 152 76 8 13 145 46 192 2.60e-11 63.9
MS.gene33762.t1 MTR_8g069160 29.114 158 93 6 1 142 54 208 9.30e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33762.t1 AT1G61110 55.125 361 109 13 1 347 1 322 1.34e-111 328
MS.gene33762.t1 AT3G15510 50.515 388 123 13 1 346 1 361 3.45e-103 308
MS.gene33762.t1 AT3G04070 64.362 188 63 2 8 191 3 190 6.63e-84 258
MS.gene33762.t1 AT1G52880 74.432 176 29 2 19 192 21 182 3.43e-82 253
MS.gene33762.t1 AT3G04070 62.032 187 53 2 8 191 3 174 3.49e-80 248
MS.gene33762.t1 AT1G69490 63.687 179 45 3 15 193 9 167 1.92e-79 244
MS.gene33762.t1 AT1G01720 65.169 178 41 3 14 191 6 162 3.68e-75 234
MS.gene33762.t1 AT4G27410 64.972 177 38 4 15 191 14 166 6.25e-75 233
MS.gene33762.t1 AT5G08790 56.621 219 71 4 14 231 6 201 6.31e-75 233
MS.gene33762.t1 AT1G52890 64.972 177 38 4 15 191 14 166 2.92e-74 232
MS.gene33762.t1 AT3G15500 59.204 201 47 4 15 215 14 179 4.95e-74 232
MS.gene33762.t1 AT1G77450 64.571 175 38 3 14 187 9 160 5.42e-74 229
MS.gene33762.t1 AT5G63790 55.300 217 67 4 14 229 49 236 1.73e-73 230
MS.gene33762.t1 AT5G63790 55.300 217 67 4 14 229 59 246 2.22e-73 230
MS.gene33762.t1 AT4G27410 59.278 194 38 5 15 191 14 183 1.55e-70 223
MS.gene33762.t1 AT5G39820 52.717 184 80 3 17 197 22 201 5.50e-64 206
MS.gene33762.t1 AT1G26870 51.397 179 74 2 15 193 16 181 5.86e-61 201
MS.gene33762.t1 AT5G39610 48.936 188 73 3 12 198 17 182 3.93e-58 190
MS.gene33762.t1 AT5G18270 47.030 202 86 2 15 216 21 201 5.38e-58 191
MS.gene33762.t1 AT5G13180 54.802 177 54 3 14 190 13 163 9.27e-58 187
MS.gene33762.t1 AT5G53950 50.000 176 68 1 14 189 16 171 3.38e-57 190
MS.gene33762.t1 AT5G18270 46.040 202 88 2 15 216 21 201 4.72e-57 189
MS.gene33762.t1 AT3G18400 50.000 178 64 3 14 191 4 156 3.51e-56 186
MS.gene33762.t1 AT1G76420 48.851 174 66 2 15 188 22 172 4.57e-56 186
MS.gene33762.t1 AT2G24430 49.718 177 66 2 15 191 16 169 7.84e-56 185
MS.gene33762.t1 AT2G24430 49.718 177 66 2 15 191 16 169 7.84e-56 185
MS.gene33762.t1 AT5G61430 50.000 174 65 2 15 188 16 167 2.39e-55 184
MS.gene33762.t1 AT3G15170 48.000 175 71 1 15 189 20 174 6.16e-55 182
MS.gene33762.t1 AT5G07680 50.000 174 65 2 15 188 3 154 1.03e-54 182
MS.gene33762.t1 AT5G07680 50.000 174 65 2 15 188 17 168 1.10e-54 182
MS.gene33762.t1 AT3G29035 57.746 142 58 1 15 156 24 163 1.12e-54 182
MS.gene33762.t1 AT3G04060 49.438 178 69 2 15 192 20 176 2.15e-54 182
MS.gene33762.t1 AT3G03200 48.087 183 70 4 15 195 6 165 2.20e-53 183
MS.gene33762.t1 AT2G33480 50.273 183 56 5 14 192 14 165 3.37e-53 176
MS.gene33762.t1 AT2G02450 60.317 126 49 1 17 142 53 177 1.79e-52 178
MS.gene33762.t1 AT2G33480 49.727 183 59 5 14 192 14 167 2.00e-52 174
MS.gene33762.t1 AT2G02450 60.317 126 49 1 17 142 53 177 2.28e-52 179
MS.gene33762.t1 AT5G17260 45.876 194 74 6 15 205 6 171 7.64e-51 176
MS.gene33762.t1 AT1G12260 46.893 177 65 4 14 187 6 156 8.82e-51 172
MS.gene33762.t1 AT1G65910 41.410 227 95 6 15 239 6 196 9.22e-51 179
MS.gene33762.t1 AT4G36160 45.789 190 69 6 1 187 1 159 1.01e-50 173
MS.gene33762.t1 AT4G36160 45.789 190 69 6 1 187 1 159 1.01e-50 173
MS.gene33762.t1 AT4G36160 45.789 190 69 6 1 187 5 163 1.05e-50 173
MS.gene33762.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.11e-50 173
MS.gene33762.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.11e-50 173
MS.gene33762.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.11e-50 173
MS.gene33762.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.11e-50 173
MS.gene33762.t1 AT1G79580 45.506 178 68 3 15 189 17 168 1.11e-50 173
MS.gene33762.t1 AT1G12260 46.893 177 65 4 14 187 6 156 1.18e-50 174
MS.gene33762.t1 AT5G62380 46.354 192 69 6 14 198 6 170 2.06e-50 172
MS.gene33762.t1 AT5G62380 46.354 192 69 6 14 198 6 170 2.06e-50 172
MS.gene33762.t1 AT5G46590 56.738 141 53 3 7 145 3 137 5.35e-50 169
MS.gene33762.t1 AT5G46590 56.738 141 53 3 7 145 3 137 6.42e-50 169
MS.gene33762.t1 AT2G18060 45.355 183 67 5 8 187 6 158 9.70e-50 170
MS.gene33762.t1 AT2G18060 45.355 183 67 5 8 187 6 158 9.70e-50 170
MS.gene33762.t1 AT2G43000 46.409 181 74 4 17 197 20 177 1.62e-49 167
MS.gene33762.t1 AT4G17980 48.087 183 68 5 7 187 3 160 2.41e-49 167
MS.gene33762.t1 AT5G66300 44.175 206 79 7 8 206 9 185 2.59e-49 167
MS.gene33762.t1 AT4G17980 48.087 183 68 5 7 187 3 160 2.76e-49 166
MS.gene33762.t1 AT3G17730 46.286 175 68 4 15 187 6 156 2.84e-49 166
MS.gene33762.t1 AT1G71930 41.063 207 91 4 15 218 9 187 3.45e-49 168
MS.gene33762.t1 AT1G71930 41.063 207 91 4 15 218 9 187 3.45e-49 168
MS.gene33762.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.81e-48 168
MS.gene33762.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.81e-48 168
MS.gene33762.t1 AT1G56010 42.408 191 88 4 15 204 19 188 2.28e-48 166
MS.gene33762.t1 AT4G10350 46.067 178 69 4 15 189 9 162 2.40e-48 166
MS.gene33762.t1 AT3G10480 46.032 189 76 4 3 189 15 179 3.64e-48 168
MS.gene33762.t1 AT3G12977 44.509 173 73 3 15 187 18 167 3.80e-48 164
MS.gene33762.t1 AT1G33280 46.067 178 66 4 15 189 8 158 5.12e-48 164
MS.gene33762.t1 AT3G10480 46.032 189 77 4 3 189 15 180 5.94e-48 167
MS.gene33762.t1 AT1G54330 47.429 175 63 4 15 187 6 153 3.09e-47 162
MS.gene33762.t1 AT3G61910 39.352 216 105 6 14 215 10 213 4.27e-47 162
MS.gene33762.t1 AT3G10490 44.444 189 80 4 3 189 15 180 5.08e-47 159
MS.gene33762.t1 AT4G28530 42.564 195 70 3 15 193 10 178 1.50e-46 162
MS.gene33762.t1 AT2G46770 41.146 192 99 4 1 189 2 182 1.72e-46 162
MS.gene33762.t1 AT1G32510 40.094 212 97 4 15 218 6 195 1.72e-46 159
MS.gene33762.t1 AT1G32770 42.135 178 86 3 15 189 16 179 1.84e-46 162
MS.gene33762.t1 AT3G10500 45.506 178 71 3 15 190 9 162 3.22e-46 165
MS.gene33762.t1 AT3G10490 44.444 189 80 4 3 189 15 180 1.96e-45 161
MS.gene33762.t1 AT3G12910 48.045 179 77 6 17 191 23 189 1.70e-44 155
MS.gene33762.t1 AT5G04410 45.506 178 71 4 15 190 9 162 3.40e-44 160
MS.gene33762.t1 AT1G34180 51.389 144 66 2 1 142 2 143 5.80e-44 157
MS.gene33762.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.46e-43 159
MS.gene33762.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.66e-43 159
MS.gene33762.t1 AT1G34180 51.389 144 66 2 1 142 2 143 3.16e-43 157
MS.gene33762.t1 AT2G17040 39.234 209 96 4 17 224 8 186 3.57e-43 150
MS.gene33762.t1 AT1G34190 53.435 131 57 2 17 145 18 146 4.61e-43 157
MS.gene33762.t1 AT3G10480 39.189 222 77 4 3 189 15 213 1.06e-42 155
MS.gene33762.t1 AT1G34180 47.436 156 66 2 1 142 2 155 2.89e-42 153
MS.gene33762.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.46e-42 154
MS.gene33762.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.85e-42 154
MS.gene33762.t1 AT4G35580 46.591 176 66 5 15 187 9 159 4.44e-42 153
MS.gene33762.t1 AT2G27300 51.181 127 59 2 15 140 14 138 1.72e-41 148
MS.gene33762.t1 AT1G34180 47.436 156 66 2 1 142 2 155 1.86e-41 152
MS.gene33762.t1 AT5G24590 55.039 129 55 2 15 141 13 140 1.90e-41 150
MS.gene33762.t1 AT3G49530 51.128 133 62 2 15 145 13 144 1.17e-40 147
MS.gene33762.t1 AT3G49530 51.128 133 62 2 15 145 13 144 2.22e-40 148
MS.gene33762.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.71e-40 148
MS.gene33762.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.71e-40 148
MS.gene33762.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.71e-40 148
MS.gene33762.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.71e-40 148
MS.gene33762.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.71e-40 148
MS.gene33762.t1 AT5G64060 41.143 175 77 4 15 187 6 156 1.37e-39 143
MS.gene33762.t1 AT5G64530 41.808 177 83 3 15 191 3 159 7.71e-39 137
MS.gene33762.t1 AT3G44290 46.875 128 65 2 17 143 16 141 2.11e-37 134
MS.gene33762.t1 AT5G22290 43.165 139 76 2 3 140 9 145 4.04e-37 136
MS.gene33762.t1 AT1G32870 47.191 178 68 4 15 190 10 163 8.68e-37 139
MS.gene33762.t1 AT1G32870 47.191 178 68 4 15 190 10 163 9.66e-37 139
MS.gene33762.t1 AT3G44290 46.875 128 65 2 17 143 16 141 9.87e-37 135
MS.gene33762.t1 AT1G32870 47.191 178 68 4 15 190 46 199 1.63e-36 139
MS.gene33762.t1 AT5G64530 49.219 128 53 2 15 142 3 118 1.52e-35 127
MS.gene33762.t1 AT5G04395 39.610 154 79 2 3 142 16 169 4.83e-34 124
MS.gene33762.t1 AT5G61430 47.200 125 44 2 64 188 2 104 1.68e-32 122
MS.gene33762.t1 AT3G44350 35.160 219 103 9 14 222 4 193 6.10e-32 120
MS.gene33762.t1 AT1G56010 41.135 141 62 3 64 204 2 121 1.39e-30 117
MS.gene33762.t1 AT3G04420 44.186 129 66 3 16 140 4 130 1.94e-29 115
MS.gene33762.t1 AT3G04420 44.186 129 66 3 16 140 4 130 4.64e-29 115
MS.gene33762.t1 AT3G44350 40.876 137 71 4 14 143 4 137 5.06e-29 110
MS.gene33762.t1 AT3G12977 44.355 124 46 3 64 187 14 114 5.40e-29 112
MS.gene33762.t1 AT5G22380 36.667 180 87 6 18 191 8 166 1.03e-28 111
MS.gene33762.t1 AT4G01550 44.186 129 68 3 18 142 7 135 2.20e-28 115
MS.gene33762.t1 AT4G28530 45.312 128 54 1 15 126 10 137 2.28e-28 112
MS.gene33762.t1 AT2G33480 45.736 129 40 4 68 192 8 110 1.18e-27 108
MS.gene33762.t1 AT1G02230 42.308 130 67 4 16 140 4 130 2.02e-27 110
MS.gene33762.t1 AT4G10350 45.902 122 42 3 68 189 18 115 2.03e-27 109
MS.gene33762.t1 AT4G01520 42.029 138 75 4 16 148 5 142 6.58e-25 102
MS.gene33762.t1 AT4G01540 43.846 130 68 4 18 142 7 136 2.93e-24 103
MS.gene33762.t1 AT4G01540 43.846 130 68 4 18 142 7 136 3.93e-24 102
MS.gene33762.t1 AT1G02250 41.538 130 68 4 16 140 4 130 4.71e-24 101
MS.gene33762.t1 AT4G01540 43.846 130 68 4 18 142 7 136 5.74e-24 102
MS.gene33762.t1 AT4G01540 43.846 130 68 4 18 142 7 136 7.75e-24 102
MS.gene33762.t1 AT1G02220 40.310 129 68 4 16 140 4 127 1.27e-22 98.2
MS.gene33762.t1 AT5G14000 36.923 130 76 3 15 142 15 140 2.04e-20 87.0
MS.gene33762.t1 AT5G14000 36.923 130 76 3 15 142 15 140 4.71e-20 87.4
MS.gene33762.t1 AT1G01010 38.060 134 69 6 18 140 6 136 2.91e-19 88.6
MS.gene33762.t1 AT2G43000 41.322 121 48 4 77 197 2 99 2.94e-19 85.1
MS.gene33762.t1 AT3G55210 32.124 193 89 8 15 193 11 175 1.27e-16 79.3
MS.gene33762.t1 AT3G56530 35.659 129 78 3 15 140 52 178 1.56e-16 79.7
MS.gene33762.t1 AT5G50820 33.835 133 78 4 14 144 16 140 2.18e-16 77.0
MS.gene33762.t1 AT3G10490 39.216 102 39 3 88 189 2 80 3.25e-15 76.3
MS.gene33762.t1 AT3G10490 39.216 102 39 3 88 189 2 80 3.25e-15 76.3
MS.gene33762.t1 AT2G18060 38.947 95 32 3 93 187 2 70 2.49e-14 72.8
MS.gene33762.t1 AT3G04430 36.364 132 70 5 21 140 6 135 1.66e-13 68.9
MS.gene33762.t1 AT1G28470 31.973 147 79 7 13 142 75 217 8.62e-13 68.6
MS.gene33762.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.31e-12 68.2
MS.gene33762.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.63e-12 67.8
MS.gene33762.t1 AT5G14490 30.435 161 86 7 5 145 48 202 3.17e-12 67.4
MS.gene33762.t1 AT5G14490 30.435 161 86 7 5 145 45 199 3.18e-12 67.4
MS.gene33762.t1 AT1G25580 34.266 143 75 7 13 142 56 192 3.35e-12 67.8
MS.gene33762.t1 AT5G14490 30.435 161 86 7 5 145 48 202 3.67e-12 67.0
MS.gene33762.t1 AT5G56620 31.613 155 76 6 15 142 43 194 4.22e-12 67.0
MS.gene33762.t1 AT4G29230 34.416 154 74 8 15 144 48 198 4.72e-12 67.4
MS.gene33762.t1 AT4G29230 34.416 154 74 8 15 144 47 197 4.75e-12 67.4
MS.gene33762.t1 AT5G14490 30.435 161 86 7 5 145 45 199 5.94e-12 65.9
MS.gene33762.t1 AT4G29230 34.416 154 74 8 15 144 48 198 8.46e-12 66.2

Find 79 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTCCGGACATAAAT+TGG 0.154420 4.4:+23630151 MS.gene33762:CDS
TTTCATCAAAATTCAATTCT+TGG 0.173199 4.4:+23630096 MS.gene33762:CDS
CATGCCAAGGCCACTCTTAA+TGG 0.200176 4.4:+23629711 MS.gene33762:CDS
CCCAATAGGGCTGCTACTTC+TGG 0.200373 4.4:+23629092 MS.gene33762:CDS
TATATAGGTAAAGCAAGTTT+TGG 0.250824 4.4:+23629011 MS.gene33762:intron
CAAAAGGAGTTAAAACTAAT+TGG 0.262200 4.4:+23629216 MS.gene33762:CDS
GAATTCTTCTTGTTATTGTT+TGG 0.278889 4.4:-23629329 None:intergenic
CTATTGGGTCTTGCTCCATT+TGG 0.292483 4.4:-23629077 None:intergenic
CCCAGAAGTAGCAGCCCTAT+TGG 0.308982 4.4:-23629093 None:intergenic
TAAATGCATCATCACAGTTT+TGG 0.311946 4.4:+23629938 MS.gene33762:CDS
TATTGGGTCTTGCTCCATTT+GGG 0.322648 4.4:-23629076 None:intergenic
GCATTTAGTGCACGTTTCAT+AGG 0.337891 4.4:-23629922 None:intergenic
AATTCAATTCTTGGATCTGT+TGG 0.346734 4.4:+23630105 MS.gene33762:CDS
TCTTCAAGCAAACGGTTTCA+TGG 0.349803 4.4:+23629988 MS.gene33762:CDS
ATCGGAAACCTGGTGGTAGG+TGG 0.399421 4.4:-23628715 None:intergenic
TTCTTCTTGTTATTGTTTGG+AGG 0.403734 4.4:-23629326 None:intergenic
TCTTCAAGAAGCACAAGTTA+TGG 0.409732 4.4:+23629787 MS.gene33762:CDS
TGATCCATTAAGAGTGGCCT+TGG 0.412912 4.4:-23629715 None:intergenic
TTCCCATCAGATGTTAATAT+AGG 0.417975 4.4:-23629143 None:intergenic
AATGATCACGGAATGCAAAA+TGG 0.418422 4.4:+23629850 MS.gene33762:CDS
CCAGAAGTAGCAGCCCTATT+GGG 0.428179 4.4:-23629092 None:intergenic
CTTCATCGGTGGGGTGGAAT+CGG 0.437306 4.4:-23628733 None:intergenic
TTCGTACTTGGGAGCTCCCA+TGG 0.440454 4.4:-23628845 None:intergenic
TTTCATGGAGATCTTAATAG+TGG 0.440666 4.4:+23630003 MS.gene33762:CDS
GGGCTGCTACTTCTGGGTAT+TGG 0.442139 4.4:+23629099 MS.gene33762:CDS
AATGATGACAATTTCTTCGA+TGG 0.445563 4.4:+23629817 MS.gene33762:CDS
AACTAGTTCCAATTTATGTC+CGG 0.449473 4.4:-23630159 None:intergenic
GCTTCTTGAAGATGAATGTT+TGG 0.449692 4.4:-23629776 None:intergenic
CCAATAGGGCTGCTACTTCT+GGG 0.454581 4.4:+23629093 MS.gene33762:CDS
ATCTCTGCTATGATGGCTAC+TGG 0.455487 4.4:-23628803 None:intergenic
AAGCCTATATTAACATCTGA+TGG 0.457224 4.4:+23629140 MS.gene33762:CDS
GAGGCAACAATTTCAACTTC+CGG 0.462175 4.4:+23630140 MS.gene33762:CDS
TGGAATGAAACAGGGTCACC+AGG 0.466947 4.4:+23629958 MS.gene33762:CDS
AAATGGAGCAAGACCCAATA+GGG 0.470103 4.4:+23629079 MS.gene33762:CDS
CAAATGGAGCAAGACCCAAT+AGG 0.479465 4.4:+23629078 MS.gene33762:CDS
GGAAACCTGGTGGTAGGTGG+GGG 0.480157 4.4:-23628712 None:intergenic
TCTGGGTATTGGAAAGCTAC+TGG 0.487868 4.4:+23629110 MS.gene33762:CDS
ATTGGATCATGCATGAGTAT+AGG 0.492325 4.4:+23629234 MS.gene33762:CDS
CATTTAGTGCACGTTTCATA+GGG 0.495376 4.4:-23629921 None:intergenic
GGTCATCTTCTTCAAGCAAA+CGG 0.495966 4.4:+23629980 MS.gene33762:CDS
TCTGATGGGAATCAGAAAGT+TGG 0.499516 4.4:+23629155 MS.gene33762:CDS
GTGGGGTGGAATCGGAAACC+TGG 0.501175 4.4:-23628725 None:intergenic
AAGTTGTTCTTGGTGGAAGC+TGG 0.503644 4.4:-23630074 None:intergenic
CGGAAACCTGGTGGTAGGTG+GGG 0.504339 4.4:-23628713 None:intergenic
TCGGAAACCTGGTGGTAGGT+GGG 0.504413 4.4:-23628714 None:intergenic
GCTATGATGGCTACTGGAAG+TGG 0.505754 4.4:-23628797 None:intergenic
ATTCTTGGATCTGTTGGAGA+TGG 0.516290 4.4:+23630111 MS.gene33762:CDS
GAGATCAATCTCTGCTATGA+TGG 0.523237 4.4:-23628810 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.531070 4.4:+23628828 MS.gene33762:CDS
AGGGATAGAAAATACCCAAA+TGG 0.534980 4.4:+23629062 MS.gene33762:CDS
TATGGAGGGAAGCCACCAAA+AGG 0.535327 4.4:+23629200 MS.gene33762:CDS
TGATGAAAAGTTGTTCTTGG+TGG 0.544981 4.4:-23630081 None:intergenic
TGTGCATATACATACCCTTA+GGG 0.545490 4.4:-23629351 None:intergenic
GGTTGTGACACAAACTCAAA+GGG 0.556107 4.4:+23629871 MS.gene33762:CDS
ACTACGAGTTCTTCATCGGT+GGG 0.558882 4.4:-23628743 None:intergenic
TTGTTTGGAGGATGATCAGA+AGG 0.562065 4.4:-23629314 None:intergenic
GGATGATCAGAAGGCAGAGG+AGG 0.572911 4.4:-23629305 None:intergenic
GGAGGATGATCAGAAGGCAG+AGG 0.572927 4.4:-23629308 None:intergenic
ATAACAAGAAGAATTCCCTA+AGG 0.573041 4.4:+23629336 MS.gene33762:CDS
CGAGTTCTTCATCGGTGGGG+TGG 0.573171 4.4:-23628739 None:intergenic
TCGTACTTGGGAGCTCCCAT+GGG 0.577363 4.4:-23628844 None:intergenic
TGGTTGTGACACAAACTCAA+AGG 0.577669 4.4:+23629870 MS.gene33762:CDS
GGAATCGGAAACCTGGTGGT+AGG 0.585801 4.4:-23628718 None:intergenic
CATTAAGAGTGGCCTTGGCA+TGG 0.590428 4.4:-23629710 None:intergenic
GTGAACTACGAGTTCTTCAT+CGG 0.590635 4.4:-23628747 None:intergenic
AGCCTATATTAACATCTGAT+GGG 0.592875 4.4:+23629141 MS.gene33762:CDS
GGAATCTTTGCAAATGATCA+CGG 0.595620 4.4:+23629838 MS.gene33762:CDS
AACTACGAGTTCTTCATCGG+TGG 0.606004 4.4:-23628744 None:intergenic
TGGAATAAGTAGCAATGCTG+AGG 0.609239 4.4:+23630023 MS.gene33762:CDS
GCAACAGTAGCACCATGCCA+AGG 0.616723 4.4:+23629698 MS.gene33762:CDS
TCTCTACAAATTCGACCCAT+GGG 0.621113 4.4:+23628829 MS.gene33762:CDS
TAACAAGAAGAATTCCCTAA+GGG 0.639219 4.4:+23629337 MS.gene33762:CDS
CTACGAGTTCTTCATCGGTG+GGG 0.640544 4.4:-23628742 None:intergenic
CTGTTGGAGATGGTGTAATG+AGG 0.645707 4.4:+23630121 MS.gene33762:CDS
TCATATTGATCCATTAAGAG+TGG 0.647276 4.4:-23629721 None:intergenic
GGAATGAAACAGGGTCACCA+GGG 0.654300 4.4:+23629959 MS.gene33762:CDS
GGGTGGAATCGGAAACCTGG+TGG 0.682142 4.4:-23628722 None:intergenic
TTGCTTGAAGAAGATGACCC+TGG 0.699438 4.4:-23629976 None:intergenic
TGTGACACAAACTCAAAGGG+TGG 0.701015 4.4:+23629874 MS.gene33762:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATAAATAATTGAACA+TGG + chr4.4:23629408-23629427 MS.gene33762:intron 10.0%
!! ATTTCTTTAATATAAAAACA+TGG - chr4.4:23629609-23629628 None:intergenic 10.0%
!!! TTAACATTTTTTTATTGTAT+TGG + chr4.4:23629630-23629649 MS.gene33762:intron 10.0%
!!! TTTTTTTATTGTATTGGTTT+TGG + chr4.4:23629636-23629655 MS.gene33762:intron 15.0%
!! AAAAAAAACAGAGAAAAAAC+AGG - chr4.4:23628985-23629004 None:intergenic 20.0%
!! AAAATTTCATATGCAAAACA+TGG - chr4.4:23628936-23628955 None:intergenic 20.0%
!! TTTCATCAAAATTCAATTCT+TGG + chr4.4:23630096-23630115 MS.gene33762:CDS 20.0%
!!! GTTTTGTTGCATATTATTAT+AGG - chr4.4:23629755-23629774 None:intergenic 20.0%
! AAACATGGAACATAAAATCT+AGG - chr4.4:23628921-23628940 None:intergenic 25.0%
! AAATGGATGAAAAGATGAAA+TGG - chr4.4:23628884-23628903 None:intergenic 25.0%
! AATGGATGAAAAGATGAAAT+GGG - chr4.4:23628883-23628902 None:intergenic 25.0%
! ATATGCATAGTTATGAAACA+CGG + chr4.4:23629501-23629520 MS.gene33762:intron 25.0%
! ATTTATGAAACAAATGCACA+TGG - chr4.4:23629391-23629410 None:intergenic 25.0%
! CAAAAGGAGTTAAAACTAAT+TGG + chr4.4:23629216-23629235 MS.gene33762:CDS 25.0%
! GAAAAAACAGGACAATATTT+CGG - chr4.4:23628973-23628992 None:intergenic 25.0%
!! AGTTTTTGAACTTGCATTAT+AGG - chr4.4:23629285-23629304 None:intergenic 25.0%
!! ATATAGGTAAAGCAAGTTTT+GGG + chr4.4:23629012-23629031 MS.gene33762:intron 25.0%
!! TATATAGGTAAAGCAAGTTT+TGG + chr4.4:23629011-23629030 MS.gene33762:intron 25.0%
!! TTTTGATGAAAAGTTGTTCT+TGG - chr4.4:23630087-23630106 None:intergenic 25.0%
!!! AAGAAAGCACTTGTTTTTTA+TGG + chr4.4:23629182-23629201 MS.gene33762:CDS 25.0%
!!! CAATTAGTTTTAACTCCTTT+TGG - chr4.4:23629218-23629237 None:intergenic 25.0%
!!! CGCTAATAATTTTAGAAAAC+CGG + chr4.4:23629550-23629569 MS.gene33762:intron 25.0%
!!! CTAATAATTTTAGAAAACCG+GGG + chr4.4:23629552-23629571 MS.gene33762:intron 25.0%
!!! GAATTCTTCTTGTTATTGTT+TGG - chr4.4:23629332-23629351 None:intergenic 25.0%
!!! GCTAATAATTTTAGAAAACC+GGG + chr4.4:23629551-23629570 MS.gene33762:intron 25.0%
!!! TGTTGCTTTTCTTGTATATT+CGG - chr4.4:23629684-23629703 None:intergenic 25.0%
AAGATCAGACCATTCAAAAA+AGG - chr4.4:23629460-23629479 None:intergenic 30.0%
AAGCCTATATTAACATCTGA+TGG + chr4.4:23629140-23629159 MS.gene33762:CDS 30.0%
AATGATGACAATTTCTTCGA+TGG + chr4.4:23629817-23629836 MS.gene33762:CDS 30.0%
AATTCAATTCTTGGATCTGT+TGG + chr4.4:23630105-23630124 MS.gene33762:CDS 30.0%
AGCCTATATTAACATCTGAT+GGG + chr4.4:23629141-23629160 MS.gene33762:CDS 30.0%
ATAACAAGAAGAATTCCCTA+AGG + chr4.4:23629336-23629355 MS.gene33762:CDS 30.0%
ATGGATGAAAAGATGAAATG+GGG - chr4.4:23628882-23628901 None:intergenic 30.0%
TAACAAGAAGAATTCCCTAA+GGG + chr4.4:23629337-23629356 MS.gene33762:CDS 30.0%
TCATATTGATCCATTAAGAG+TGG - chr4.4:23629724-23629743 None:intergenic 30.0%
TGTGAAAAAGTTTCGTACTT+GGG - chr4.4:23628859-23628878 None:intergenic 30.0%
TTCCCATCAGATGTTAATAT+AGG - chr4.4:23629146-23629165 None:intergenic 30.0%
TTTCATGGAGATCTTAATAG+TGG + chr4.4:23630003-23630022 MS.gene33762:CDS 30.0%
! GAACATAAAATCTAGGATGT+AGG - chr4.4:23628914-23628933 None:intergenic 30.0%
! TAAATGCATCATCACAGTTT+TGG + chr4.4:23629938-23629957 MS.gene33762:CDS 30.0%
! TATAGGTAAAGCAAGTTTTG+GGG + chr4.4:23629013-23629032 MS.gene33762:intron 30.0%
!! TTCTTCTTGTTATTGTTTGG+AGG - chr4.4:23629329-23629348 None:intergenic 30.0%
!!! AAAGCACTTGTTTTTTATGG+AGG + chr4.4:23629185-23629204 MS.gene33762:CDS 30.0%
!!! AAGCACTTGTTTTTTATGGA+GGG + chr4.4:23629186-23629205 MS.gene33762:CDS 30.0%
!!! TTAGTTTTAACTCCTTTTGG+TGG - chr4.4:23629215-23629234 None:intergenic 30.0%
AATGATCACGGAATGCAAAA+TGG + chr4.4:23629850-23629869 MS.gene33762:CDS 35.0%
AGGATGTAGGTTTGAGTAAA+TGG - chr4.4:23628901-23628920 None:intergenic 35.0%
AGGGATAGAAAATACCCAAA+TGG + chr4.4:23629062-23629081 MS.gene33762:CDS 35.0%
ATTGGATCATGCATGAGTAT+AGG + chr4.4:23629234-23629253 MS.gene33762:CDS 35.0%
CATTTAGTGCACGTTTCATA+GGG - chr4.4:23629924-23629943 None:intergenic 35.0%
GCTTCTTGAAGATGAATGTT+TGG - chr4.4:23629779-23629798 None:intergenic 35.0%
GGAATCTTTGCAAATGATCA+CGG + chr4.4:23629838-23629857 MS.gene33762:CDS 35.0%
GTGTGAAAAAGTTTCGTACT+TGG - chr4.4:23628860-23628879 None:intergenic 35.0%
TGATGAAAAGTTGTTCTTGG+TGG - chr4.4:23630084-23630103 None:intergenic 35.0%
TGTGCATATACATACCCTTA+GGG - chr4.4:23629354-23629373 None:intergenic 35.0%
TTCAACTTCCGGACATAAAT+TGG + chr4.4:23630151-23630170 MS.gene33762:CDS 35.0%
! TCTTCAAGAAGCACAAGTTA+TGG + chr4.4:23629787-23629806 MS.gene33762:CDS 35.0%
! TTGGGTATTTTCTATCCCTT+GGG - chr4.4:23629061-23629080 None:intergenic 35.0%
! TTTGGGTATTTTCTATCCCT+TGG - chr4.4:23629062-23629081 None:intergenic 35.0%
!! ATAATTTTAGAAAACCGGGG+AGG + chr4.4:23629555-23629574 MS.gene33762:intron 35.0%
!! TAATTTTAGAAAACCGGGGA+GGG + chr4.4:23629556-23629575 MS.gene33762:intron 35.0%
!!! CACAGTTTTGGAATGAAACA+GGG + chr4.4:23629950-23629969 MS.gene33762:CDS 35.0%
!!! CTCTCTGTTCCTTTTTTGAA+TGG + chr4.4:23629448-23629467 MS.gene33762:intron 35.0%
!!! TCACAGTTTTGGAATGAAAC+AGG + chr4.4:23629949-23629968 MS.gene33762:CDS 35.0%
AAATGGAGCAAGACCCAATA+GGG + chr4.4:23629079-23629098 MS.gene33762:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG + chr4.4:23628828-23628847 MS.gene33762:CDS 40.0%
ATTCTTGGATCTGTTGGAGA+TGG + chr4.4:23630111-23630130 MS.gene33762:CDS 40.0%
GAGATCAATCTCTGCTATGA+TGG - chr4.4:23628813-23628832 None:intergenic 40.0%
GAGGCAACAATTTCAACTTC+CGG + chr4.4:23630140-23630159 MS.gene33762:CDS 40.0%
GCATTTAGTGCACGTTTCAT+AGG - chr4.4:23629925-23629944 None:intergenic 40.0%
GGTCATCTTCTTCAAGCAAA+CGG + chr4.4:23629980-23629999 MS.gene33762:CDS 40.0%
GGTTGTGACACAAACTCAAA+GGG + chr4.4:23629871-23629890 MS.gene33762:CDS 40.0%
GTGAACTACGAGTTCTTCAT+CGG - chr4.4:23628750-23628769 None:intergenic 40.0%
GTGTGCATATACATACCCTT+AGG - chr4.4:23629355-23629374 None:intergenic 40.0%
TATTGGGTCTTGCTCCATTT+GGG - chr4.4:23629079-23629098 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG + chr4.4:23628829-23628848 MS.gene33762:CDS 40.0%
TCTGATGGGAATCAGAAAGT+TGG + chr4.4:23629155-23629174 MS.gene33762:CDS 40.0%
TCTTCAAGCAAACGGTTTCA+TGG + chr4.4:23629988-23630007 MS.gene33762:CDS 40.0%
TGGAATAAGTAGCAATGCTG+AGG + chr4.4:23630023-23630042 MS.gene33762:CDS 40.0%
TGGTTGTGACACAAACTCAA+AGG + chr4.4:23629870-23629889 MS.gene33762:CDS 40.0%
TTGTTTGGAGGATGATCAGA+AGG - chr4.4:23629317-23629336 None:intergenic 40.0%
! CAGAAGCAGCTTTTCTTTTG+AGG - chr4.4:23628775-23628794 None:intergenic 40.0%
!!! GGTTTTGGAGCTTGATGATT+GGG + chr4.4:23629651-23629670 MS.gene33762:intron 40.0%
!!! TGGTTTTGGAGCTTGATGAT+TGG + chr4.4:23629650-23629669 MS.gene33762:intron 40.0%
AACTACGAGTTCTTCATCGG+TGG - chr4.4:23628747-23628766 None:intergenic 45.0%
AAGTTGTTCTTGGTGGAAGC+TGG - chr4.4:23630077-23630096 None:intergenic 45.0%
ACTACGAGTTCTTCATCGGT+GGG - chr4.4:23628746-23628765 None:intergenic 45.0%
ATCTCTGCTATGATGGCTAC+TGG - chr4.4:23628806-23628825 None:intergenic 45.0%
CAAATGGAGCAAGACCCAAT+AGG + chr4.4:23629078-23629097 MS.gene33762:CDS 45.0%
CTATTGGGTCTTGCTCCATT+TGG - chr4.4:23629080-23629099 None:intergenic 45.0%
CTGTTGGAGATGGTGTAATG+AGG + chr4.4:23630121-23630140 MS.gene33762:CDS 45.0%
TGATCCATTAAGAGTGGCCT+TGG - chr4.4:23629718-23629737 None:intergenic 45.0%
TGTGACACAAACTCAAAGGG+TGG + chr4.4:23629874-23629893 MS.gene33762:CDS 45.0%
TTGCTTGAAGAAGATGACCC+TGG - chr4.4:23629979-23629998 None:intergenic 45.0%
!! TCTGGGTATTGGAAAGCTAC+TGG + chr4.4:23629110-23629129 MS.gene33762:CDS 45.0%
!!! AGTGGTACTTTTTCAGCCCA+AGG + chr4.4:23629042-23629061 MS.gene33762:CDS 45.0%
!!! CAAGTTTTGGGGAACAAGAG+TGG + chr4.4:23629024-23629043 MS.gene33762:CDS 45.0%
!!! GTGGTACTTTTTCAGCCCAA+GGG + chr4.4:23629043-23629062 MS.gene33762:CDS 45.0%
!!! GTTTTTTTTTTTTTTTATAT+AGG + chr4.4:23628996-23629015 MS.gene33762:intron 5.0%
AATGAAACACAGACCCTCCC+CGG - chr4.4:23629572-23629591 None:intergenic 50.0%
CATGCCAAGGCCACTCTTAA+TGG + chr4.4:23629711-23629730 MS.gene33762:CDS 50.0%
CCAGAAGTAGCAGCCCTATT+GGG - chr4.4:23629095-23629114 None:intergenic 50.0%
CTACGAGTTCTTCATCGGTG+GGG - chr4.4:23628745-23628764 None:intergenic 50.0%
GCTATGATGGCTACTGGAAG+TGG - chr4.4:23628800-23628819 None:intergenic 50.0%
GGAATGAAACAGGGTCACCA+GGG + chr4.4:23629959-23629978 MS.gene33762:CDS 50.0%
TATGGAGGGAAGCCACCAAA+AGG + chr4.4:23629200-23629219 MS.gene33762:CDS 50.0%
TGGAATGAAACAGGGTCACC+AGG + chr4.4:23629958-23629977 MS.gene33762:CDS 50.0%
! CATTAAGAGTGGCCTTGGCA+TGG - chr4.4:23629713-23629732 None:intergenic 50.0%
! CCAATAGGGCTGCTACTTCT+GGG + chr4.4:23629093-23629112 MS.gene33762:CDS 50.0%
ATCGGAAACCTGGTGGTAGG+TGG - chr4.4:23628718-23628737 None:intergenic 55.0%
CCCAGAAGTAGCAGCCCTAT+TGG - chr4.4:23629096-23629115 None:intergenic 55.0%
CTTCATCGGTGGGGTGGAAT+CGG - chr4.4:23628736-23628755 None:intergenic 55.0%
GCAACAGTAGCACCATGCCA+AGG + chr4.4:23629698-23629717 MS.gene33762:CDS 55.0%
GGAATCGGAAACCTGGTGGT+AGG - chr4.4:23628721-23628740 None:intergenic 55.0%
GGAGGATGATCAGAAGGCAG+AGG - chr4.4:23629311-23629330 None:intergenic 55.0%
GGATGATCAGAAGGCAGAGG+AGG - chr4.4:23629308-23629327 None:intergenic 55.0%
TCGGAAACCTGGTGGTAGGT+GGG - chr4.4:23628717-23628736 None:intergenic 55.0%
TCGTACTTGGGAGCTCCCAT+GGG - chr4.4:23628847-23628866 None:intergenic 55.0%
TTCGTACTTGGGAGCTCCCA+TGG - chr4.4:23628848-23628867 None:intergenic 55.0%
! CCCAATAGGGCTGCTACTTC+TGG + chr4.4:23629092-23629111 MS.gene33762:CDS 55.0%
! GGGCTGCTACTTCTGGGTAT+TGG + chr4.4:23629099-23629118 MS.gene33762:CDS 55.0%
CGAGTTCTTCATCGGTGGGG+TGG - chr4.4:23628742-23628761 None:intergenic 60.0%
CGGAAACCTGGTGGTAGGTG+GGG - chr4.4:23628716-23628735 None:intergenic 60.0%
GGAAACCTGGTGGTAGGTGG+GGG - chr4.4:23628715-23628734 None:intergenic 60.0%
GGGTGGAATCGGAAACCTGG+TGG - chr4.4:23628725-23628744 None:intergenic 60.0%
GTGGGGTGGAATCGGAAACC+TGG - chr4.4:23628728-23628747 None:intergenic 60.0%
CCACACCCCCACCTACCACC+AGG + chr4.4:23628707-23628726 MS.gene33762:CDS 70.0%
CCTGGTGGTAGGTGGGGGTG+TGG - chr4.4:23628710-23628729 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 23628677 23630179 23628677 ID=MS.gene33762
chr4.4 mRNA 23628677 23630179 23628677 ID=MS.gene33762.t1;Parent=MS.gene33762
chr4.4 exon 23628677 23628860 23628677 ID=MS.gene33762.t1.exon1;Parent=MS.gene33762.t1
chr4.4 CDS 23628677 23628860 23628677 ID=cds.MS.gene33762.t1;Parent=MS.gene33762.t1
chr4.4 exon 23629018 23629358 23629018 ID=MS.gene33762.t1.exon2;Parent=MS.gene33762.t1
chr4.4 CDS 23629018 23629358 23629018 ID=cds.MS.gene33762.t1;Parent=MS.gene33762.t1
chr4.4 exon 23629661 23630179 23629661 ID=MS.gene33762.t1.exon3;Parent=MS.gene33762.t1
chr4.4 CDS 23629661 23630179 23629661 ID=cds.MS.gene33762.t1;Parent=MS.gene33762.t1
Gene Sequence

>MS.gene33762

ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGTTTCCGATTCCACCCCACCGATGAAGAACTCGTAGTTCACTACCTCAAAAGAAAAGCTGCTTCTGCACCACTTCCAGTAGCCATCATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAGCTCCCAAGTACGAAACTTTTTCACACCCCATTTCATCTTTTCATCCATTTACTCAAACCTACATCCTAGATTTTATGTTCCATGTTTTGCATATGAAATTTTGAACATGTTTTAATCCGAAATATTGTCCTGTTTTTTCTCTGTTTTTTTTTTTTTTTATATAGGTAAAGCAAGTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGAGCAAGACCCAATAGGGCTGCTACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGAGTTAAAACTAATTGGATCATGCATGAGTATAGGCTCATCACTGATTATAATCATAATTCCTATAATGCAAGTTCAAAAACTCCTCCTCTGCCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCCCTAAGGGTATGTATATGCACACACATAATTGCATGCCATGTGCATTTGTTTCATAAATTAATAAATAATTGAACATGGACACTAAATTATATCTTCTCTCTGTTCCTTTTTTGAATGGTCTGATCTTTAAAGTATAATTTTGTTAATCATATGCATAGTTATGAAACACGGATACTGACACGACAATGACACTGACACGCTAATAATTTTAGAAAACCGGGGAGGGTCTGTGTTTCATTGCATATTCATTAAACCATGTTTTTATATTAAAGAAATATTAACATTTTTTTATTGTATTGGTTTTGGAGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACTCTTAATGGATCAATATGATGATCAAACCTATAATAATATGCAACAAAACTCCAAACATTCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTCGATGGAATCTTTGCAAATGATCACGGAATGCAAAATGGTTGTGACACAAACTCAAAGGGTGGTAACAATAATAATGAATCATTATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGGTCACCAGGGTCATCTTCTTCAAGCAAACGGTTTCATGGAGATCTTAATAGTGGAATAAGTAGCAATGCTGAGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGAACAACTTTTCATCAAAATTCAATTCTTGGATCTGTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG
Protein sequence

>MS.gene33762.t1

MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDYNHNSYNASSKTPPLPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPLLMDQYDDQTYNNMQQNSKHSSSRSTSYGLENDDNFFDGIFANDHGMQNGCDTNSKGGNNNNESLFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNSGISSNAEENNSFVSLLSQLPPRTTFHQNSILGSVGDGVMRQQFQLPDINWN