Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33957.t1 | XP_024641473.1 | 95.7 | 163 | 7 | 0 | 1 | 163 | 1 | 163 | 4.60E-87 | 330.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33957.t1 | Q9C8W9 | 81.2 | 149 | 28 | 0 | 15 | 163 | 5 | 153 | 3.7e-69 | 262.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33957.t1 | A0A396JTC2 | 95.7 | 163 | 7 | 0 | 1 | 163 | 1 | 163 | 3.3e-87 | 330.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene33957.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33957.t1 | MTR_1g096430 | 96.689 | 151 | 5 | 0 | 13 | 163 | 1 | 151 | 4.61e-110 | 317 |
MS.gene33957.t1 | MTR_5g021710 | 78.523 | 149 | 32 | 0 | 15 | 163 | 4 | 152 | 3.50e-89 | 264 |
MS.gene33957.t1 | MTR_8g076110 | 75.168 | 149 | 37 | 0 | 15 | 163 | 2 | 150 | 1.91e-85 | 253 |
MS.gene33957.t1 | MTR_4g036030 | 73.510 | 151 | 40 | 0 | 13 | 163 | 1 | 151 | 6.38e-82 | 246 |
MS.gene33957.t1 | MTR_4g101680 | 67.683 | 164 | 44 | 1 | 13 | 167 | 1 | 164 | 1.76e-79 | 240 |
MS.gene33957.t1 | MTR_5g012080 | 69.281 | 153 | 45 | 2 | 13 | 163 | 1 | 153 | 2.15e-74 | 226 |
MS.gene33957.t1 | MTR_8g024480 | 74.453 | 137 | 35 | 0 | 10 | 146 | 6 | 142 | 3.64e-72 | 223 |
MS.gene33957.t1 | MTR_4g035590 | 73.438 | 128 | 34 | 0 | 19 | 146 | 8 | 135 | 6.04e-69 | 213 |
MS.gene33957.t1 | MTR_2g062730 | 73.485 | 132 | 34 | 1 | 16 | 146 | 7 | 138 | 1.10e-68 | 212 |
MS.gene33957.t1 | MTR_6g477900 | 61.654 | 133 | 50 | 1 | 19 | 151 | 6 | 137 | 1.86e-58 | 182 |
MS.gene33957.t1 | MTR_2g064090 | 61.481 | 135 | 51 | 1 | 19 | 153 | 6 | 139 | 2.48e-58 | 185 |
MS.gene33957.t1 | MTR_5g076850 | 63.281 | 128 | 46 | 1 | 19 | 146 | 6 | 132 | 4.11e-56 | 186 |
MS.gene33957.t1 | MTR_3g064580 | 57.857 | 140 | 58 | 1 | 18 | 157 | 5 | 143 | 1.65e-54 | 182 |
MS.gene33957.t1 | MTR_3g435150 | 58.594 | 128 | 50 | 1 | 19 | 146 | 16 | 140 | 2.08e-52 | 169 |
MS.gene33957.t1 | MTR_2g064470 | 54.930 | 142 | 58 | 3 | 15 | 156 | 7 | 142 | 4.26e-52 | 168 |
MS.gene33957.t1 | MTR_6g084430 | 53.623 | 138 | 61 | 1 | 15 | 152 | 1 | 135 | 5.61e-52 | 168 |
MS.gene33957.t1 | MTR_4g108760 | 50.318 | 157 | 73 | 2 | 5 | 159 | 3 | 156 | 9.51e-52 | 169 |
MS.gene33957.t1 | MTR_5g041940 | 52.381 | 147 | 64 | 2 | 19 | 165 | 3 | 143 | 1.01e-51 | 166 |
MS.gene33957.t1 | MTR_4g081870 | 54.610 | 141 | 56 | 2 | 17 | 152 | 7 | 144 | 1.06e-51 | 166 |
MS.gene33957.t1 | MTR_2g078700 | 56.154 | 130 | 52 | 2 | 19 | 146 | 23 | 149 | 9.95e-51 | 167 |
MS.gene33957.t1 | MTR_7g085220 | 51.429 | 140 | 56 | 2 | 16 | 146 | 5 | 141 | 1.61e-50 | 165 |
MS.gene33957.t1 | MTR_5g014300 | 54.815 | 135 | 53 | 2 | 19 | 146 | 6 | 139 | 2.17e-50 | 164 |
MS.gene33957.t1 | MTR_1g008740 | 54.225 | 142 | 59 | 3 | 8 | 146 | 2 | 140 | 2.53e-50 | 165 |
MS.gene33957.t1 | MTR_6g012670 | 57.812 | 128 | 51 | 1 | 19 | 146 | 20 | 144 | 2.83e-50 | 164 |
MS.gene33957.t1 | MTR_1g008740 | 54.225 | 142 | 59 | 3 | 8 | 146 | 16 | 154 | 3.38e-50 | 165 |
MS.gene33957.t1 | MTR_3g070030 | 54.348 | 138 | 57 | 2 | 20 | 154 | 20 | 154 | 4.02e-50 | 164 |
MS.gene33957.t1 | MTR_7g097090 | 52.414 | 145 | 63 | 3 | 14 | 156 | 5 | 145 | 6.65e-50 | 162 |
MS.gene33957.t1 | MTR_4g098630 | 55.639 | 133 | 55 | 2 | 17 | 146 | 4 | 135 | 8.86e-50 | 162 |
MS.gene33957.t1 | MTR_7g085260 | 55.303 | 132 | 52 | 2 | 19 | 146 | 17 | 145 | 2.11e-49 | 163 |
MS.gene33957.t1 | MTR_3g116070 | 53.061 | 147 | 53 | 4 | 16 | 154 | 20 | 158 | 8.04e-49 | 161 |
MS.gene33957.t1 | MTR_3g096920 | 55.224 | 134 | 56 | 2 | 13 | 146 | 1 | 130 | 1.25e-48 | 159 |
MS.gene33957.t1 | MTR_4g089135 | 51.408 | 142 | 59 | 3 | 12 | 146 | 3 | 141 | 1.49e-48 | 160 |
MS.gene33957.t1 | MTR_1g090720 | 56.589 | 129 | 55 | 1 | 17 | 145 | 40 | 167 | 2.79e-48 | 162 |
MS.gene33957.t1 | MTR_3g096920 | 55.224 | 134 | 56 | 2 | 13 | 146 | 1 | 130 | 3.04e-48 | 159 |
MS.gene33957.t1 | MTR_1g069805 | 51.724 | 145 | 64 | 3 | 14 | 156 | 5 | 145 | 3.86e-48 | 157 |
MS.gene33957.t1 | MTR_3g088110 | 54.478 | 134 | 57 | 2 | 13 | 146 | 1 | 130 | 5.38e-48 | 157 |
MS.gene33957.t1 | MTR_7g011130 | 57.600 | 125 | 50 | 1 | 22 | 146 | 22 | 143 | 5.59e-48 | 159 |
MS.gene33957.t1 | MTR_2g079990 | 53.906 | 128 | 56 | 1 | 19 | 146 | 16 | 140 | 7.18e-48 | 159 |
MS.gene33957.t1 | MTR_7g005280 | 50.340 | 147 | 65 | 2 | 19 | 163 | 15 | 155 | 7.27e-48 | 156 |
MS.gene33957.t1 | MTR_8g094580 | 55.469 | 128 | 53 | 2 | 19 | 146 | 7 | 130 | 1.06e-47 | 156 |
MS.gene33957.t1 | MTR_2g079990 | 53.906 | 128 | 56 | 1 | 19 | 146 | 16 | 140 | 1.46e-47 | 159 |
MS.gene33957.t1 | MTR_3g109340 | 52.632 | 133 | 58 | 2 | 16 | 146 | 19 | 148 | 1.65e-47 | 158 |
MS.gene33957.t1 | MTR_3g109340 | 52.632 | 133 | 58 | 2 | 16 | 146 | 19 | 148 | 1.66e-47 | 158 |
MS.gene33957.t1 | MTR_2g080010 | 51.079 | 139 | 63 | 2 | 10 | 146 | 6 | 141 | 3.02e-47 | 157 |
MS.gene33957.t1 | MTR_8g059170 | 53.125 | 128 | 57 | 1 | 19 | 146 | 14 | 138 | 3.48e-47 | 156 |
MS.gene33957.t1 | MTR_6g032770 | 52.308 | 130 | 57 | 2 | 19 | 146 | 18 | 144 | 4.07e-47 | 157 |
MS.gene33957.t1 | MTR_2157s0010 | 51.825 | 137 | 60 | 2 | 19 | 152 | 8 | 141 | 5.63e-47 | 154 |
MS.gene33957.t1 | MTR_2g093810 | 54.264 | 129 | 54 | 2 | 20 | 146 | 15 | 140 | 2.91e-46 | 154 |
MS.gene33957.t1 | MTR_7g011120 | 56.000 | 125 | 52 | 1 | 22 | 146 | 11 | 132 | 1.21e-45 | 152 |
MS.gene33957.t1 | MTR_6g011860 | 51.079 | 139 | 62 | 3 | 21 | 156 | 17 | 152 | 1.90e-45 | 153 |
MS.gene33957.t1 | MTR_8g467490 | 49.645 | 141 | 66 | 2 | 8 | 146 | 3 | 140 | 2.27e-45 | 153 |
MS.gene33957.t1 | MTR_5g040420 | 48.936 | 141 | 67 | 2 | 8 | 146 | 3 | 140 | 2.76e-45 | 153 |
MS.gene33957.t1 | MTR_7g100990 | 50.365 | 137 | 63 | 2 | 16 | 150 | 8 | 141 | 3.33e-45 | 151 |
MS.gene33957.t1 | MTR_3g096140 | 49.640 | 139 | 66 | 2 | 21 | 156 | 9 | 146 | 4.58e-45 | 149 |
MS.gene33957.t1 | MTR_8g063550 | 55.469 | 128 | 52 | 2 | 21 | 146 | 8 | 132 | 7.60e-45 | 150 |
MS.gene33957.t1 | MTR_3g093040 | 51.128 | 133 | 64 | 1 | 19 | 151 | 108 | 239 | 1.06e-44 | 149 |
MS.gene33957.t1 | MTR_8g063550 | 54.615 | 130 | 54 | 2 | 21 | 148 | 8 | 134 | 3.67e-44 | 151 |
MS.gene33957.t1 | MTR_1g097300 | 53.435 | 131 | 60 | 1 | 21 | 151 | 21 | 150 | 4.10e-44 | 153 |
MS.gene33957.t1 | MTR_5g069030 | 55.469 | 128 | 56 | 1 | 19 | 146 | 25 | 151 | 4.22e-44 | 154 |
MS.gene33957.t1 | MTR_3g096140 | 49.640 | 139 | 66 | 2 | 21 | 156 | 9 | 146 | 4.75e-44 | 149 |
MS.gene33957.t1 | MTR_8g063550 | 55.469 | 128 | 52 | 2 | 21 | 146 | 8 | 132 | 7.88e-44 | 150 |
MS.gene33957.t1 | MTR_3g093050 | 52.632 | 133 | 62 | 1 | 19 | 151 | 22 | 153 | 6.18e-43 | 150 |
MS.gene33957.t1 | MTR_3g093050 | 52.632 | 133 | 62 | 1 | 19 | 151 | 22 | 153 | 7.68e-43 | 150 |
MS.gene33957.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 21 | 146 | 10 | 135 | 1.70e-42 | 149 |
MS.gene33957.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 21 | 146 | 10 | 135 | 1.86e-42 | 149 |
MS.gene33957.t1 | MTR_0036s0150 | 52.756 | 127 | 58 | 2 | 21 | 146 | 7 | 132 | 3.57e-42 | 147 |
MS.gene33957.t1 | MTR_4g134460 | 50.000 | 130 | 61 | 2 | 18 | 146 | 53 | 179 | 3.94e-42 | 145 |
MS.gene33957.t1 | MTR_2g086880 | 50.400 | 125 | 60 | 1 | 21 | 145 | 20 | 142 | 1.21e-41 | 145 |
MS.gene33957.t1 | MTR_2g086880 | 50.388 | 129 | 62 | 1 | 17 | 145 | 16 | 142 | 1.54e-41 | 146 |
MS.gene33957.t1 | MTR_4g075980 | 50.725 | 138 | 62 | 2 | 12 | 146 | 8 | 142 | 1.61e-41 | 141 |
MS.gene33957.t1 | MTR_2g068880 | 49.640 | 139 | 63 | 3 | 13 | 146 | 15 | 151 | 3.04e-41 | 140 |
MS.gene33957.t1 | MTR_8g093580 | 53.125 | 128 | 55 | 2 | 21 | 146 | 8 | 132 | 4.37e-41 | 144 |
MS.gene33957.t1 | MTR_4g052620 | 46.753 | 154 | 75 | 4 | 15 | 161 | 1 | 154 | 5.99e-41 | 138 |
MS.gene33957.t1 | MTR_2g068920 | 48.551 | 138 | 65 | 2 | 13 | 146 | 15 | 150 | 1.14e-40 | 138 |
MS.gene33957.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 21 | 146 | 10 | 135 | 1.15e-40 | 144 |
MS.gene33957.t1 | MTR_8g099750 | 50.769 | 130 | 57 | 2 | 19 | 146 | 14 | 138 | 1.63e-40 | 136 |
MS.gene33957.t1 | MTR_5g090970 | 47.015 | 134 | 65 | 2 | 16 | 146 | 15 | 145 | 4.89e-39 | 135 |
MS.gene33957.t1 | MTR_3g070040 | 47.482 | 139 | 59 | 2 | 23 | 153 | 12 | 144 | 9.94e-39 | 134 |
MS.gene33957.t1 | MTR_5g090970 | 47.015 | 134 | 64 | 3 | 16 | 146 | 15 | 144 | 1.79e-37 | 130 |
MS.gene33957.t1 | MTR_3g098810 | 46.212 | 132 | 62 | 2 | 19 | 146 | 14 | 140 | 2.65e-37 | 126 |
MS.gene33957.t1 | MTR_2g086690 | 46.000 | 150 | 67 | 6 | 20 | 158 | 5 | 151 | 8.44e-37 | 127 |
MS.gene33957.t1 | MTR_3g098810 | 46.212 | 132 | 62 | 2 | 19 | 146 | 14 | 140 | 1.69e-36 | 126 |
MS.gene33957.t1 | MTR_3g096140 | 46.400 | 125 | 63 | 2 | 35 | 156 | 2 | 125 | 3.11e-35 | 125 |
MS.gene33957.t1 | MTR_8g023840 | 47.015 | 134 | 66 | 4 | 19 | 149 | 11 | 142 | 3.20e-34 | 124 |
MS.gene33957.t1 | MTR_4g094302 | 43.846 | 130 | 60 | 3 | 19 | 146 | 11 | 129 | 2.09e-33 | 116 |
MS.gene33957.t1 | MTR_4g094302 | 43.846 | 130 | 60 | 3 | 19 | 146 | 11 | 129 | 7.81e-33 | 115 |
MS.gene33957.t1 | MTR_8g023860 | 45.588 | 136 | 69 | 4 | 19 | 151 | 12 | 145 | 2.64e-31 | 116 |
MS.gene33957.t1 | MTR_7g105170 | 43.182 | 132 | 71 | 3 | 19 | 146 | 4 | 135 | 2.84e-30 | 110 |
MS.gene33957.t1 | MTR_8g023900 | 41.045 | 134 | 74 | 4 | 15 | 145 | 8 | 139 | 1.15e-28 | 110 |
MS.gene33957.t1 | MTR_8g023900 | 42.105 | 152 | 78 | 5 | 8 | 151 | 177 | 326 | 4.21e-28 | 108 |
MS.gene33957.t1 | MTR_8g023930 | 43.846 | 130 | 68 | 4 | 19 | 145 | 24 | 151 | 2.10e-28 | 109 |
MS.gene33957.t1 | MTR_8g094580 | 59.722 | 72 | 28 | 1 | 75 | 146 | 6 | 76 | 2.76e-26 | 100 |
MS.gene33957.t1 | MTR_8g023880 | 38.667 | 150 | 71 | 6 | 13 | 145 | 1 | 146 | 3.69e-25 | 97.8 |
MS.gene33957.t1 | MTR_7g070140 | 50.000 | 84 | 40 | 2 | 73 | 154 | 15 | 98 | 5.69e-24 | 91.3 |
MS.gene33957.t1 | MTR_8g093790 | 37.121 | 132 | 64 | 5 | 19 | 150 | 10 | 122 | 4.89e-18 | 77.4 |
MS.gene33957.t1 | MTR_7g083330 | 30.469 | 128 | 84 | 4 | 19 | 145 | 18 | 141 | 4.41e-15 | 69.7 |
MS.gene33957.t1 | MTR_3g096400 | 29.771 | 131 | 79 | 5 | 19 | 146 | 7 | 127 | 2.62e-14 | 67.8 |
MS.gene33957.t1 | MTR_7g083360 | 28.289 | 152 | 101 | 5 | 14 | 161 | 5 | 152 | 4.40e-14 | 66.2 |
MS.gene33957.t1 | MTR_7g083370 | 27.068 | 133 | 92 | 4 | 14 | 145 | 5 | 133 | 1.06e-12 | 62.4 |
MS.gene33957.t1 | MTR_7g070150 | 52.830 | 53 | 23 | 2 | 112 | 163 | 1 | 52 | 6.08e-12 | 58.9 |
MS.gene33957.t1 | MTR_1g087190 | 53.333 | 45 | 20 | 1 | 21 | 64 | 7 | 51 | 2.65e-11 | 56.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33957.t1 | AT1G71930 | 81.208 | 149 | 28 | 0 | 15 | 163 | 5 | 153 | 2.71e-90 | 266 |
MS.gene33957.t1 | AT1G71930 | 81.208 | 149 | 28 | 0 | 15 | 163 | 5 | 153 | 2.71e-90 | 266 |
MS.gene33957.t1 | AT2G18060 | 76.000 | 150 | 35 | 1 | 15 | 163 | 4 | 153 | 1.17e-85 | 256 |
MS.gene33957.t1 | AT2G18060 | 76.000 | 150 | 35 | 1 | 15 | 163 | 4 | 153 | 1.17e-85 | 256 |
MS.gene33957.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 12 | 163 | 3 | 154 | 2.92e-84 | 253 |
MS.gene33957.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 12 | 163 | 3 | 154 | 2.92e-84 | 253 |
MS.gene33957.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 12 | 163 | 7 | 158 | 3.22e-84 | 253 |
MS.gene33957.t1 | AT5G66300 | 69.536 | 151 | 45 | 1 | 14 | 163 | 7 | 157 | 7.75e-79 | 236 |
MS.gene33957.t1 | AT1G12260 | 68.874 | 151 | 47 | 0 | 13 | 163 | 1 | 151 | 3.14e-78 | 236 |
MS.gene33957.t1 | AT1G12260 | 68.874 | 151 | 47 | 0 | 13 | 163 | 1 | 151 | 8.13e-78 | 237 |
MS.gene33957.t1 | AT1G62700 | 70.199 | 151 | 45 | 0 | 13 | 163 | 1 | 151 | 2.55e-77 | 235 |
MS.gene33957.t1 | AT1G62700 | 70.199 | 151 | 45 | 0 | 13 | 163 | 1 | 151 | 2.55e-77 | 235 |
MS.gene33957.t1 | AT2G46770 | 75.912 | 137 | 33 | 0 | 10 | 146 | 7 | 143 | 4.39e-75 | 229 |
MS.gene33957.t1 | AT5G62380 | 67.550 | 151 | 47 | 1 | 15 | 163 | 1 | 151 | 2.78e-73 | 224 |
MS.gene33957.t1 | AT5G62380 | 67.550 | 151 | 47 | 1 | 15 | 163 | 1 | 151 | 2.78e-73 | 224 |
MS.gene33957.t1 | AT1G32770 | 71.233 | 146 | 39 | 1 | 1 | 146 | 1 | 143 | 1.29e-72 | 222 |
MS.gene33957.t1 | AT3G61910 | 70.504 | 139 | 41 | 0 | 12 | 150 | 4 | 142 | 9.79e-71 | 217 |
MS.gene33957.t1 | AT1G33280 | 71.324 | 136 | 39 | 0 | 19 | 154 | 8 | 143 | 2.52e-70 | 215 |
MS.gene33957.t1 | AT4G10350 | 69.784 | 139 | 40 | 1 | 19 | 157 | 9 | 145 | 4.84e-69 | 213 |
MS.gene33957.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 19 | 152 | 17 | 151 | 1.67e-66 | 207 |
MS.gene33957.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 19 | 152 | 17 | 151 | 1.67e-66 | 207 |
MS.gene33957.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 19 | 152 | 17 | 151 | 1.67e-66 | 207 |
MS.gene33957.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 19 | 152 | 17 | 151 | 1.67e-66 | 207 |
MS.gene33957.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 19 | 152 | 17 | 151 | 1.67e-66 | 207 |
MS.gene33957.t1 | AT3G17730 | 60.432 | 139 | 54 | 1 | 19 | 157 | 6 | 143 | 1.90e-59 | 185 |
MS.gene33957.t1 | AT3G03200 | 61.029 | 136 | 52 | 1 | 19 | 154 | 6 | 140 | 1.29e-56 | 184 |
MS.gene33957.t1 | AT5G46590 | 61.069 | 131 | 49 | 2 | 17 | 146 | 4 | 133 | 1.18e-55 | 177 |
MS.gene33957.t1 | AT5G46590 | 61.069 | 131 | 49 | 2 | 17 | 146 | 4 | 133 | 1.67e-55 | 176 |
MS.gene33957.t1 | AT1G65910 | 60.902 | 133 | 51 | 1 | 19 | 151 | 6 | 137 | 2.54e-55 | 184 |
MS.gene33957.t1 | AT3G18400 | 54.745 | 137 | 59 | 1 | 15 | 151 | 1 | 134 | 8.59e-55 | 175 |
MS.gene33957.t1 | AT5G17260 | 58.824 | 136 | 55 | 1 | 19 | 154 | 6 | 140 | 1.03e-54 | 179 |
MS.gene33957.t1 | AT4G17980 | 59.848 | 132 | 50 | 2 | 17 | 146 | 4 | 134 | 3.50e-54 | 172 |
MS.gene33957.t1 | AT4G17980 | 59.848 | 132 | 50 | 2 | 17 | 146 | 4 | 134 | 1.02e-53 | 172 |
MS.gene33957.t1 | AT1G54330 | 62.500 | 128 | 47 | 1 | 19 | 146 | 6 | 132 | 1.75e-53 | 172 |
MS.gene33957.t1 | AT1G56010 | 54.194 | 155 | 64 | 4 | 2 | 154 | 3 | 152 | 2.19e-52 | 169 |
MS.gene33957.t1 | AT5G07680 | 52.703 | 148 | 65 | 2 | 14 | 159 | 12 | 156 | 2.52e-52 | 169 |
MS.gene33957.t1 | AT5G07680 | 53.846 | 143 | 61 | 2 | 19 | 159 | 3 | 142 | 2.56e-52 | 169 |
MS.gene33957.t1 | AT5G39610 | 59.375 | 128 | 49 | 1 | 19 | 146 | 20 | 144 | 1.02e-51 | 167 |
MS.gene33957.t1 | AT3G29035 | 59.375 | 128 | 49 | 1 | 19 | 146 | 24 | 148 | 1.77e-51 | 167 |
MS.gene33957.t1 | AT3G15170 | 56.391 | 133 | 53 | 2 | 16 | 146 | 17 | 146 | 5.38e-51 | 166 |
MS.gene33957.t1 | AT1G69490 | 54.074 | 135 | 59 | 1 | 16 | 150 | 6 | 137 | 6.41e-51 | 164 |
MS.gene33957.t1 | AT5G61430 | 53.147 | 143 | 62 | 2 | 19 | 159 | 16 | 155 | 9.43e-51 | 166 |
MS.gene33957.t1 | AT3G12977 | 55.970 | 134 | 56 | 1 | 15 | 148 | 14 | 144 | 1.35e-50 | 164 |
MS.gene33957.t1 | AT2G24430 | 55.639 | 133 | 54 | 2 | 16 | 146 | 13 | 142 | 1.55e-50 | 164 |
MS.gene33957.t1 | AT2G24430 | 55.639 | 133 | 54 | 2 | 16 | 146 | 13 | 142 | 1.55e-50 | 164 |
MS.gene33957.t1 | AT3G04070 | 52.143 | 140 | 59 | 2 | 12 | 146 | 3 | 139 | 5.21e-50 | 164 |
MS.gene33957.t1 | AT5G53950 | 58.462 | 130 | 49 | 2 | 19 | 146 | 17 | 143 | 5.62e-50 | 165 |
MS.gene33957.t1 | AT3G04070 | 52.143 | 140 | 59 | 2 | 12 | 146 | 3 | 139 | 8.31e-50 | 164 |
MS.gene33957.t1 | AT1G76420 | 54.545 | 143 | 60 | 2 | 6 | 146 | 9 | 148 | 2.60e-49 | 162 |
MS.gene33957.t1 | AT4G27410 | 51.449 | 138 | 62 | 2 | 18 | 153 | 13 | 147 | 5.57e-49 | 160 |
MS.gene33957.t1 | AT5G63790 | 54.478 | 134 | 57 | 2 | 13 | 146 | 44 | 173 | 1.23e-48 | 159 |
MS.gene33957.t1 | AT5G63790 | 54.478 | 134 | 57 | 2 | 13 | 146 | 54 | 183 | 1.58e-48 | 159 |
MS.gene33957.t1 | AT1G61110 | 53.488 | 129 | 56 | 2 | 19 | 146 | 16 | 141 | 1.93e-48 | 159 |
MS.gene33957.t1 | AT3G10480 | 56.154 | 130 | 56 | 1 | 17 | 146 | 25 | 153 | 4.97e-48 | 161 |
MS.gene33957.t1 | AT3G10480 | 56.154 | 130 | 56 | 1 | 17 | 146 | 25 | 153 | 5.11e-48 | 161 |
MS.gene33957.t1 | AT3G10490 | 50.345 | 145 | 68 | 2 | 12 | 153 | 20 | 163 | 6.19e-48 | 155 |
MS.gene33957.t1 | AT5G18270 | 55.039 | 129 | 54 | 2 | 19 | 146 | 21 | 146 | 6.29e-48 | 158 |
MS.gene33957.t1 | AT5G08790 | 54.478 | 134 | 57 | 2 | 13 | 146 | 1 | 130 | 8.40e-48 | 156 |
MS.gene33957.t1 | AT1G77450 | 55.906 | 127 | 52 | 2 | 20 | 146 | 11 | 133 | 1.18e-47 | 155 |
MS.gene33957.t1 | AT2G33480 | 51.493 | 134 | 59 | 1 | 19 | 152 | 15 | 142 | 1.28e-47 | 155 |
MS.gene33957.t1 | AT5G18270 | 54.264 | 129 | 55 | 2 | 19 | 146 | 21 | 146 | 1.36e-47 | 157 |
MS.gene33957.t1 | AT2G33480 | 51.493 | 134 | 59 | 1 | 19 | 152 | 15 | 142 | 1.37e-47 | 155 |
MS.gene33957.t1 | AT3G04060 | 51.389 | 144 | 64 | 3 | 19 | 159 | 20 | 160 | 2.04e-47 | 157 |
MS.gene33957.t1 | AT5G04410 | 54.615 | 130 | 58 | 1 | 17 | 146 | 7 | 135 | 2.16e-47 | 162 |
MS.gene33957.t1 | AT1G32510 | 51.825 | 137 | 58 | 2 | 17 | 146 | 4 | 139 | 2.79e-47 | 155 |
MS.gene33957.t1 | AT1G33060 | 50.323 | 155 | 72 | 3 | 5 | 156 | 11 | 163 | 5.06e-47 | 162 |
MS.gene33957.t1 | AT1G33060 | 50.323 | 155 | 72 | 3 | 5 | 156 | 11 | 163 | 5.62e-47 | 162 |
MS.gene33957.t1 | AT3G10500 | 53.846 | 130 | 59 | 1 | 17 | 146 | 7 | 135 | 1.05e-46 | 160 |
MS.gene33957.t1 | AT3G15500 | 51.938 | 129 | 59 | 1 | 18 | 146 | 13 | 138 | 1.64e-46 | 154 |
MS.gene33957.t1 | AT1G01720 | 53.906 | 128 | 55 | 2 | 19 | 146 | 7 | 130 | 1.68e-46 | 153 |
MS.gene33957.t1 | AT3G10490 | 52.143 | 140 | 63 | 2 | 17 | 153 | 25 | 163 | 2.25e-46 | 157 |
MS.gene33957.t1 | AT2G27300 | 49.286 | 140 | 65 | 2 | 17 | 156 | 12 | 145 | 3.45e-46 | 154 |
MS.gene33957.t1 | AT1G52890 | 51.163 | 129 | 60 | 1 | 18 | 146 | 13 | 138 | 4.19e-46 | 153 |
MS.gene33957.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 12 | 146 | 3 | 135 | 5.47e-46 | 157 |
MS.gene33957.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 12 | 146 | 3 | 135 | 7.28e-46 | 157 |
MS.gene33957.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 12 | 146 | 3 | 135 | 7.56e-46 | 157 |
MS.gene33957.t1 | AT4G27410 | 48.344 | 151 | 62 | 4 | 19 | 153 | 14 | 164 | 2.40e-45 | 151 |
MS.gene33957.t1 | AT4G28530 | 51.316 | 152 | 51 | 4 | 14 | 146 | 5 | 152 | 5.43e-45 | 151 |
MS.gene33957.t1 | AT1G26870 | 50.746 | 134 | 61 | 2 | 15 | 146 | 12 | 142 | 7.38e-45 | 152 |
MS.gene33957.t1 | AT3G15510 | 53.968 | 126 | 53 | 2 | 23 | 146 | 21 | 143 | 8.74e-45 | 151 |
MS.gene33957.t1 | AT5G39820 | 51.128 | 133 | 60 | 2 | 16 | 146 | 17 | 146 | 1.73e-44 | 149 |
MS.gene33957.t1 | AT5G24590 | 55.072 | 138 | 56 | 3 | 14 | 146 | 4 | 140 | 1.75e-44 | 152 |
MS.gene33957.t1 | AT5G13180 | 53.077 | 130 | 53 | 2 | 19 | 146 | 14 | 137 | 2.29e-44 | 147 |
MS.gene33957.t1 | AT1G34180 | 46.259 | 147 | 78 | 1 | 7 | 153 | 4 | 149 | 9.55e-44 | 150 |
MS.gene33957.t1 | AT1G34180 | 49.624 | 133 | 66 | 1 | 21 | 153 | 18 | 149 | 2.77e-43 | 150 |
MS.gene33957.t1 | AT5G22290 | 47.101 | 138 | 70 | 2 | 9 | 145 | 10 | 145 | 3.03e-43 | 146 |
MS.gene33957.t1 | AT3G10480 | 44.444 | 162 | 58 | 1 | 17 | 146 | 25 | 186 | 3.24e-43 | 150 |
MS.gene33957.t1 | AT4G10350 | 70.213 | 94 | 26 | 1 | 64 | 157 | 7 | 98 | 4.12e-43 | 145 |
MS.gene33957.t1 | AT2G43000 | 51.587 | 126 | 58 | 1 | 21 | 146 | 20 | 142 | 6.84e-43 | 144 |
MS.gene33957.t1 | AT3G49530 | 51.852 | 135 | 62 | 3 | 13 | 146 | 8 | 140 | 7.14e-43 | 147 |
MS.gene33957.t1 | AT3G44290 | 48.000 | 125 | 63 | 1 | 21 | 145 | 16 | 138 | 8.33e-43 | 142 |
MS.gene33957.t1 | AT3G49530 | 51.852 | 135 | 62 | 3 | 13 | 146 | 8 | 140 | 1.31e-42 | 147 |
MS.gene33957.t1 | AT1G34180 | 44.720 | 161 | 72 | 3 | 7 | 153 | 4 | 161 | 1.73e-42 | 147 |
MS.gene33957.t1 | AT1G34190 | 49.630 | 135 | 63 | 2 | 21 | 153 | 18 | 149 | 3.02e-42 | 148 |
MS.gene33957.t1 | AT2G02450 | 47.482 | 139 | 66 | 3 | 18 | 152 | 50 | 185 | 3.09e-42 | 145 |
MS.gene33957.t1 | AT1G34180 | 47.619 | 147 | 60 | 3 | 21 | 153 | 18 | 161 | 4.05e-42 | 148 |
MS.gene33957.t1 | AT2G02450 | 47.482 | 139 | 66 | 3 | 18 | 152 | 50 | 185 | 4.97e-42 | 145 |
MS.gene33957.t1 | AT3G44290 | 48.000 | 125 | 63 | 1 | 21 | 145 | 16 | 138 | 1.48e-41 | 142 |
MS.gene33957.t1 | AT5G64060 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 2.49e-41 | 142 |
MS.gene33957.t1 | AT1G52880 | 52.344 | 128 | 54 | 2 | 23 | 146 | 21 | 145 | 7.64e-41 | 140 |
MS.gene33957.t1 | AT5G04395 | 45.098 | 153 | 71 | 3 | 16 | 155 | 25 | 177 | 3.08e-40 | 134 |
MS.gene33957.t1 | AT2G17040 | 46.512 | 129 | 63 | 2 | 21 | 146 | 8 | 133 | 2.45e-39 | 134 |
MS.gene33957.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 3.05e-39 | 139 |
MS.gene33957.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 3.05e-39 | 139 |
MS.gene33957.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 3.05e-39 | 139 |
MS.gene33957.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 3.05e-39 | 139 |
MS.gene33957.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 21 | 146 | 8 | 132 | 3.05e-39 | 139 |
MS.gene33957.t1 | AT3G12910 | 46.667 | 150 | 69 | 5 | 12 | 155 | 14 | 158 | 2.70e-38 | 132 |
MS.gene33957.t1 | AT1G32870 | 45.638 | 149 | 75 | 3 | 6 | 151 | 30 | 175 | 2.03e-35 | 129 |
MS.gene33957.t1 | AT1G56010 | 65.385 | 78 | 27 | 0 | 77 | 154 | 8 | 85 | 3.24e-35 | 124 |
MS.gene33957.t1 | AT1G32870 | 49.606 | 127 | 61 | 2 | 19 | 145 | 10 | 133 | 4.36e-35 | 128 |
MS.gene33957.t1 | AT1G32870 | 49.606 | 127 | 61 | 2 | 19 | 145 | 10 | 133 | 4.79e-35 | 128 |
MS.gene33957.t1 | AT3G12977 | 68.056 | 72 | 23 | 0 | 77 | 148 | 20 | 91 | 4.59e-33 | 117 |
MS.gene33957.t1 | AT5G61430 | 57.471 | 87 | 35 | 1 | 75 | 159 | 6 | 92 | 1.61e-31 | 114 |
MS.gene33957.t1 | AT5G22380 | 43.478 | 138 | 68 | 4 | 15 | 145 | 1 | 135 | 1.22e-29 | 108 |
MS.gene33957.t1 | AT3G44350 | 41.221 | 131 | 68 | 4 | 22 | 146 | 8 | 135 | 9.72e-29 | 104 |
MS.gene33957.t1 | AT4G28530 | 48.276 | 116 | 39 | 3 | 14 | 112 | 5 | 116 | 2.12e-28 | 107 |
MS.gene33957.t1 | AT3G44350 | 41.221 | 131 | 68 | 4 | 22 | 146 | 8 | 135 | 2.22e-28 | 105 |
MS.gene33957.t1 | AT2G33480 | 53.846 | 78 | 36 | 0 | 75 | 152 | 8 | 85 | 8.74e-28 | 103 |
MS.gene33957.t1 | AT2G18060 | 70.312 | 64 | 19 | 0 | 100 | 163 | 2 | 65 | 1.32e-27 | 104 |
MS.gene33957.t1 | AT5G64530 | 39.535 | 129 | 61 | 5 | 19 | 145 | 3 | 116 | 3.15e-25 | 95.5 |
MS.gene33957.t1 | AT5G64530 | 39.535 | 129 | 61 | 5 | 19 | 145 | 3 | 116 | 1.17e-24 | 94.7 |
MS.gene33957.t1 | AT1G02230 | 44.526 | 137 | 64 | 8 | 20 | 150 | 4 | 134 | 4.15e-24 | 96.7 |
MS.gene33957.t1 | AT4G01520 | 38.346 | 133 | 72 | 5 | 20 | 145 | 5 | 134 | 2.12e-23 | 94.0 |
MS.gene33957.t1 | AT3G04420 | 39.695 | 131 | 70 | 4 | 20 | 145 | 4 | 130 | 1.75e-22 | 91.3 |
MS.gene33957.t1 | AT3G04420 | 39.695 | 131 | 70 | 4 | 20 | 145 | 4 | 130 | 1.92e-22 | 92.0 |
MS.gene33957.t1 | AT4G01540 | 37.405 | 131 | 74 | 4 | 22 | 146 | 7 | 135 | 3.09e-22 | 92.0 |
MS.gene33957.t1 | AT4G01540 | 37.692 | 130 | 73 | 4 | 22 | 145 | 7 | 134 | 3.39e-22 | 92.0 |
MS.gene33957.t1 | AT4G01540 | 37.405 | 131 | 74 | 4 | 22 | 146 | 7 | 135 | 3.47e-22 | 91.7 |
MS.gene33957.t1 | AT4G01540 | 37.692 | 130 | 73 | 4 | 22 | 145 | 7 | 134 | 3.55e-22 | 92.4 |
MS.gene33957.t1 | AT1G02250 | 40.152 | 132 | 68 | 5 | 20 | 145 | 4 | 130 | 9.37e-22 | 90.5 |
MS.gene33957.t1 | AT4G01550 | 40.310 | 129 | 70 | 5 | 22 | 145 | 7 | 133 | 1.06e-21 | 90.9 |
MS.gene33957.t1 | AT1G02220 | 37.879 | 132 | 70 | 5 | 19 | 145 | 3 | 127 | 3.33e-19 | 83.6 |
MS.gene33957.t1 | AT1G01010 | 36.496 | 137 | 72 | 6 | 22 | 147 | 6 | 138 | 5.77e-19 | 83.2 |
MS.gene33957.t1 | AT5G50820 | 34.559 | 136 | 74 | 5 | 19 | 150 | 17 | 141 | 4.57e-18 | 77.8 |
MS.gene33957.t1 | AT3G10490 | 57.692 | 52 | 22 | 0 | 95 | 146 | 2 | 53 | 8.32e-17 | 76.6 |
MS.gene33957.t1 | AT3G10490 | 57.692 | 52 | 22 | 0 | 95 | 146 | 2 | 53 | 8.32e-17 | 76.6 |
MS.gene33957.t1 | AT3G56530 | 29.412 | 136 | 92 | 2 | 18 | 151 | 51 | 184 | 2.06e-16 | 75.1 |
MS.gene33957.t1 | AT2G43000 | 52.381 | 63 | 30 | 0 | 84 | 146 | 2 | 64 | 2.29e-16 | 73.2 |
MS.gene33957.t1 | AT5G14000 | 30.233 | 129 | 83 | 2 | 19 | 145 | 15 | 138 | 7.83e-16 | 70.9 |
MS.gene33957.t1 | AT5G14000 | 30.233 | 129 | 83 | 2 | 19 | 145 | 15 | 138 | 2.65e-15 | 70.5 |
MS.gene33957.t1 | AT5G22290 | 60.000 | 45 | 18 | 0 | 101 | 145 | 2 | 46 | 2.55e-14 | 68.6 |
MS.gene33957.t1 | AT3G55210 | 26.531 | 147 | 93 | 4 | 19 | 152 | 11 | 155 | 2.94e-13 | 66.2 |
MS.gene33957.t1 | AT3G04430 | 34.815 | 135 | 71 | 6 | 25 | 146 | 6 | 136 | 7.08e-13 | 63.9 |
Find 37 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCCACTGCTGCTGGATTT+TGG | 0.210425 | 1.4:+75008438 | MS.gene33957:CDS |
TAGGATATTTCTTATCTTTG+TGG | 0.324009 | 1.4:-75008397 | None:intergenic |
GAGATCATCATCAATGGATA+TGG | 0.360587 | 1.4:+75008012 | MS.gene33957:CDS |
CTATTAGTTCTTGTTCCTGT+AGG | 0.412771 | 1.4:-75008416 | None:intergenic |
TTGTAGGGTATTACCTCAAC+AGG | 0.423700 | 1.4:+75008083 | MS.gene33957:CDS |
ACTAATAGAGCCACTGCTGC+TGG | 0.441800 | 1.4:+75008431 | MS.gene33957:CDS |
AAGAAGGATGGGTTGTGTGC+AGG | 0.445621 | 1.4:+75009177 | MS.gene33957:CDS |
CCAACAGAAGAAGAACTTGT+AGG | 0.454094 | 1.4:+75008067 | MS.gene33957:CDS |
CCTACAAGTTCTTCTTCTGT+TGG | 0.464154 | 1.4:-75008067 | None:intergenic |
TATTAATTACTGCAGGAAGA+AGG | 0.489259 | 1.4:+75009161 | MS.gene33957:intron |
CAAATGGAAGGAAAACTGAT+TGG | 0.489271 | 1.4:+75008549 | MS.gene33957:CDS |
TACAAGGGACGTGCCCCAAA+TGG | 0.490347 | 1.4:+75008533 | MS.gene33957:CDS |
AGAAGGATGGGTTGTGTGCA+GGG | 0.492807 | 1.4:+75009178 | MS.gene33957:CDS |
ATGGAATCATGTGTACCTCC+AGG | 0.502938 | 1.4:+75008031 | MS.gene33957:CDS |
ATTGAACCATGGGACATTCA+AGG | 0.504836 | 1.4:+75008163 | MS.gene33957:CDS |
AATGCAGATAGATGCAAGCT+AGG | 0.521793 | 1.4:+75008341 | MS.gene33957:intron |
CAACAGAAGAAGAACTTGTA+GGG | 0.533130 | 1.4:+75008068 | MS.gene33957:CDS |
GTGAGTTAATCTTCCTGTTG+AGG | 0.533745 | 1.4:-75008096 | None:intergenic |
AATTACTGCAGGAAGAAGGA+TGG | 0.543175 | 1.4:+75009165 | MS.gene33957:intron |
TCAGGAGAGATCATCATCAA+TGG | 0.553807 | 1.4:+75008006 | MS.gene33957:intron |
AAAGATAAGAAATATCCTAC+AGG | 0.562663 | 1.4:+75008401 | MS.gene33957:CDS |
ATTACTGCAGGAAGAAGGAT+GGG | 0.564101 | 1.4:+75009166 | MS.gene33957:intron |
CTAAAATAACTTGCCTGTGG+AGG | 0.564331 | 1.4:-75008611 | None:intergenic |
TTCTGAACATGGTCCTCCAC+AGG | 0.565416 | 1.4:+75008598 | MS.gene33957:CDS |
AAAACAGAATAATAGGAATG+AGG | 0.568492 | 1.4:+75008495 | MS.gene33957:CDS |
ATCTCTACAAAATTGAACCA+TGG | 0.574175 | 1.4:+75008152 | MS.gene33957:CDS |
TCTCTACAAAATTGAACCAT+GGG | 0.577975 | 1.4:+75008153 | MS.gene33957:CDS |
TGATCTAGATGTTATTGTTG+AGG | 0.597687 | 1.4:+75008126 | MS.gene33957:CDS |
AGGGACGTGCCCCAAATGGA+AGG | 0.600104 | 1.4:+75008537 | MS.gene33957:CDS |
TTTCCAAAATCCAGCAGCAG+TGG | 0.602768 | 1.4:-75008441 | None:intergenic |
GTTGGATGAAATCTAAACCC+TGG | 0.604289 | 1.4:-75008049 | None:intergenic |
AATGTACCTTGAATGTCCCA+TGG | 0.604436 | 1.4:-75008169 | None:intergenic |
TGGAATCATGTGTACCTCCA+GGG | 0.620854 | 1.4:+75008032 | MS.gene33957:CDS |
GATATGAGCAACAGAATGAG+TGG | 0.640331 | 1.4:+75008363 | MS.gene33957:CDS |
ATGCTAAAATAACTTGCCTG+TGG | 0.642241 | 1.4:-75008614 | None:intergenic |
AGACATCAAACTTCTGAACA+TGG | 0.653088 | 1.4:+75008587 | MS.gene33957:CDS |
GGATGAAATCTAAACCCTGG+AGG | 0.694839 | 1.4:-75008046 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAATTAGAATAGAA+AGG | - | chr1.4:75008725-75008744 | None:intergenic | 10.0% |
!! | AAAATGATTTATTTATCAAA+TGG | - | chr1.4:75006619-75006638 | None:intergenic | 10.0% |
!!! | ATTTGATAAATAAATCATTT+TGG | + | chr1.4:75006618-75006637 | MS.gene33957:intron | 10.0% |
!!! | TAATTTACATATTTCTTTTT+TGG | - | chr1.4:75007920-75007939 | None:intergenic | 10.0% |
!!! | TTTATTTTATCTTTTGTTAT+AGG | + | chr1.4:75009008-75009027 | MS.gene33957:intron | 10.0% |
!! | AAGGATATATATACTATATA+TGG | - | chr1.4:75006496-75006515 | None:intergenic | 15.0% |
!! | CTTGTTCTATATATTATTAA+TGG | + | chr1.4:75007323-75007342 | MS.gene33957:intron | 15.0% |
!! | TTCTATATATTATTAATGGT+GGG | + | chr1.4:75007327-75007346 | MS.gene33957:intron | 15.0% |
!!! | CTTAGTTTTCTAAATAAAAA+TGG | + | chr1.4:75006758-75006777 | MS.gene33957:intron | 15.0% |
!!! | TAAGTAAAAAACAACATTTT+AGG | - | chr1.4:75007690-75007709 | None:intergenic | 15.0% |
!!! | TTTTTGTTTATAATAGTGAT+CGG | - | chr1.4:75007591-75007610 | None:intergenic | 15.0% |
!! | AAATGATTCATTATTTATGC+AGG | - | chr1.4:75007973-75007992 | None:intergenic | 20.0% |
!! | AACTAACAAACAAGATATAT+AGG | - | chr1.4:75007298-75007317 | None:intergenic | 20.0% |
!! | GTTCTATATATTATTAATGG+TGG | + | chr1.4:75007326-75007345 | MS.gene33957:intron | 20.0% |
!! | TAAACAAAAAACAACATTCT+AGG | + | chr1.4:75007601-75007620 | MS.gene33957:intron | 20.0% |
!! | TATTACTGAAATCAGTATTA+TGG | + | chr1.4:75006908-75006927 | MS.gene33957:intron | 20.0% |
!! | TATTTACTATTTACAGTCAA+AGG | - | chr1.4:75009132-75009151 | None:intergenic | 20.0% |
!! | TTAGAAAACCAAAACATATA+TGG | + | chr1.4:75007937-75007956 | MS.gene33957:intron | 20.0% |
!! | TTATATCCTTATCAACATTA+TGG | + | chr1.4:75008254-75008273 | MS.gene33957:intron | 20.0% |
!! | TTGAAATTATTAATTACTGC+AGG | + | chr1.4:75009154-75009173 | MS.gene33957:intron | 20.0% |
!! | TTGAGATGATAATATAATTG+AGG | - | chr1.4:75009093-75009112 | None:intergenic | 20.0% |
!!! | AAGAAAAGTTGTGTTTTTAT+GGG | - | chr1.4:75007252-75007271 | None:intergenic | 20.0% |
!!! | ATAAAAACACAACTTTTCTT+AGG | + | chr1.4:75007252-75007271 | MS.gene33957:intron | 20.0% |
!!! | ATGTTTTGGTTTTTATCATT+TGG | + | chr1.4:75006793-75006812 | MS.gene33957:intron | 20.0% |
!!! | CAATTTTACCATATATGTTT+TGG | - | chr1.4:75007948-75007967 | None:intergenic | 20.0% |
!!! | GATAAATAAATCATTTTGGT+TGG | + | chr1.4:75006622-75006641 | MS.gene33957:intron | 20.0% |
!!! | TAAAAACACAACTTTTCTTA+GGG | + | chr1.4:75007253-75007272 | MS.gene33957:intron | 20.0% |
!!! | TAAGAAAAGTTGTGTTTTTA+TGG | - | chr1.4:75007253-75007272 | None:intergenic | 20.0% |
!!! | TAATATAATTGAGGTTTGTT+TGG | - | chr1.4:75009084-75009103 | None:intergenic | 20.0% |
!!! | TCATAATCAAAATTTGACTT+TGG | + | chr1.4:75008226-75008245 | MS.gene33957:intron | 20.0% |
!!! | TGTATTTTTTTTTACTGTTG+AGG | - | chr1.4:75006832-75006851 | None:intergenic | 20.0% |
!!! | TTTTTACTTATAATAGTGAC+CGG | + | chr1.4:75007700-75007719 | MS.gene33957:intron | 20.0% |
!!! | TTTTTTAGAGAGAAATTCTT+AGG | + | chr1.4:75007477-75007496 | MS.gene33957:intron | 20.0% |
! | AAAACAGAATAATAGGAATG+AGG | + | chr1.4:75008495-75008514 | MS.gene33957:CDS | 25.0% |
! | AAAGATAAGAAATATCCTAC+AGG | + | chr1.4:75008401-75008420 | MS.gene33957:CDS | 25.0% |
! | AAATAAACAAATACACTCTC+CGG | - | chr1.4:75007722-75007741 | None:intergenic | 25.0% |
! | AACCAAAAAACTAATAGACA+TGG | - | chr1.4:75006692-75006711 | None:intergenic | 25.0% |
! | ACTTCCAAAAACAGAATAAT+AGG | + | chr1.4:75008488-75008507 | MS.gene33957:CDS | 25.0% |
! | AGTAAATTGAACAGAAAAGT+TGG | - | chr1.4:75007198-75007217 | None:intergenic | 25.0% |
! | AGTATATATATCCTTAGTGT+TGG | + | chr1.4:75006501-75006520 | MS.gene33957:intron | 25.0% |
! | CATCATCATCATCATTATTA+TGG | + | chr1.4:75007422-75007441 | MS.gene33957:intron | 25.0% |
! | CATTCATTAAATGATGTATG+TGG | - | chr1.4:75007645-75007626 | None:intergenic | 25.0% |
! | GTATATATATCCTTAGTGTT+GGG | + | chr1.4:75006502-75006521 | MS.gene33957:intron | 25.0% |
! | TAAATAAAAATGGAGTCTGA+TGG | + | chr1.4:75006768-75006787 | MS.gene33957:intron | 25.0% |
! | TAGGATATTTCTTATCTTTG+TGG | - | chr1.4:75008400-75008419 | None:intergenic | 25.0% |
!! | CATTCCTATTATTCTGTTTT+TGG | - | chr1.4:75008495-75008514 | None:intergenic | 25.0% |
!! | GTTTTCACACTAATTTTCAA+AGG | - | chr1.4:75006990-75007009 | None:intergenic | 25.0% |
!!! | ATCCATGTCTATTAGTTTTT+TGG | + | chr1.4:75006687-75006706 | MS.gene33957:intron | 25.0% |
!!! | CATTTTGTTTTGTTTCTTTC+AGG | + | chr1.4:75007988-75008007 | MS.gene33957:intron | 25.0% |
!!! | TGATGATGCAACTTTAATTT+TGG | - | chr1.4:75007407-75007426 | None:intergenic | 25.0% |
!!! | TTCTCTTTTTTAGAACTATG+AGG | + | chr1.4:75007811-75007830 | MS.gene33957:intron | 25.0% |
AAAAATTACACTAGCTAGCT+AGG | - | chr1.4:75007462-75007481 | None:intergenic | 30.0% | |
AAAATTACACTAGCTAGCTA+GGG | - | chr1.4:75007461-75007480 | None:intergenic | 30.0% | |
ACTGAAATCAGTATTATGGA+TGG | + | chr1.4:75006912-75006931 | MS.gene33957:intron | 30.0% | |
ATAATAGTTACCCAACACTA+AGG | - | chr1.4:75006515-75006534 | None:intergenic | 30.0% | |
ATCTCTACAAAATTGAACCA+TGG | + | chr1.4:75008152-75008171 | MS.gene33957:CDS | 30.0% | |
ATGCTGCCTTAATTTACATT+AGG | + | chr1.4:75007888-75007907 | MS.gene33957:intron | 30.0% | |
TAAACCAGAACCAAGAAATT+TGG | - | chr1.4:75007782-75007801 | None:intergenic | 30.0% | |
TACTTGTGCATGTTTGAAAA+TGG | - | chr1.4:75008879-75008898 | None:intergenic | 30.0% | |
TATTAATTACTGCAGGAAGA+AGG | + | chr1.4:75009161-75009180 | MS.gene33957:intron | 30.0% | |
TCTCTACAAAATTGAACCAT+GGG | + | chr1.4:75008153-75008172 | MS.gene33957:CDS | 30.0% | |
TGATCTAGATGTTATTGTTG+AGG | + | chr1.4:75008126-75008145 | MS.gene33957:CDS | 30.0% | |
TGTGACCAAAGAAAATTTCT+TGG | - | chr1.4:75007513-75007532 | None:intergenic | 30.0% | |
TGTTTATAATAGTGATCGGA+GGG | - | chr1.4:75007587-75007606 | None:intergenic | 30.0% | |
TTGTTTATAATAGTGATCGG+AGG | - | chr1.4:75007588-75007607 | None:intergenic | 30.0% | |
TTTAGAGAGAAATTCTTAGG+TGG | + | chr1.4:75007480-75007499 | MS.gene33957:intron | 30.0% | |
TTTATTTGTGAAGAGAGAGA+AGG | + | chr1.4:75007735-75007754 | MS.gene33957:intron | 30.0% | |
! | AAGACACTTGTCTTTTACAA+GGG | + | chr1.4:75008518-75008537 | MS.gene33957:CDS | 30.0% |
! | AATCAGTTTTCCTTCCATTT+GGG | - | chr1.4:75008550-75008569 | None:intergenic | 30.0% |
!!! | ACATATTTCTTTTTTGGCCA+AGG | - | chr1.4:75007914-75007933 | None:intergenic | 30.0% |
AGACATCAAACTTCTGAACA+TGG | + | chr1.4:75008587-75008606 | MS.gene33957:CDS | 35.0% | |
AGCATGTGCAATTCCAAAAT+TGG | - | chr1.4:75007369-75007388 | None:intergenic | 35.0% | |
CAAACCAAATTTCTTGGTTC+TGG | + | chr1.4:75007775-75007794 | MS.gene33957:intron | 35.0% | |
CAAAGAAAATTTCTTGGTCC+TGG | - | chr1.4:75007507-75007526 | None:intergenic | 35.0% | |
CAAATGGAAGGAAAACTGAT+TGG | + | chr1.4:75008549-75008568 | MS.gene33957:CDS | 35.0% | |
CAACAGAAGAAGAACTTGTA+GGG | + | chr1.4:75008068-75008087 | MS.gene33957:CDS | 35.0% | |
CAGAACCAAGAAATTTGGTT+TGG | - | chr1.4:75007777-75007796 | None:intergenic | 35.0% | |
CATGCTCCATAATGTTGATA+AGG | - | chr1.4:75008263-75008282 | None:intergenic | 35.0% | |
CCAAGGCCTAATGTAAATTA+AGG | - | chr1.4:75007897-75007916 | None:intergenic | 35.0% | |
CCTTAATTTACATTAGGCCT+TGG | + | chr1.4:75007894-75007913 | MS.gene33957:intron | 35.0% | |
GAGATCATCATCAATGGATA+TGG | + | chr1.4:75008012-75008031 | MS.gene33957:CDS | 35.0% | |
TCTTCTCTCTCTTCTTTCTT+TGG | - | chr1.4:75007537-75007556 | None:intergenic | 35.0% | |
TGTGACCAAACCAAATTTCT+TGG | + | chr1.4:75007769-75007788 | MS.gene33957:intron | 35.0% | |
TTCTCAGATGAGTCTGTTAA+AGG | + | chr1.4:75006560-75006579 | MS.gene33957:intron | 35.0% | |
TTGTGCATGTTTGAAAATGG+AGG | - | chr1.4:75008876-75008895 | None:intergenic | 35.0% | |
! | ATCAGTTTTCCTTCCATTTG+GGG | - | chr1.4:75008549-75008568 | None:intergenic | 35.0% |
! | ATGCTAAAATAACTTGCCTG+TGG | - | chr1.4:75008617-75008636 | None:intergenic | 35.0% |
! | CAATCAGTTTTCCTTCCATT+TGG | - | chr1.4:75008551-75008570 | None:intergenic | 35.0% |
! | CAGGACCAAGAAATTTTCTT+TGG | + | chr1.4:75007505-75007524 | MS.gene33957:intron | 35.0% |
! | CTATTAGTTCTTGTTCCTGT+AGG | - | chr1.4:75008419-75008438 | None:intergenic | 35.0% |
! | GAAGACACTTGTCTTTTACA+AGG | + | chr1.4:75008517-75008536 | MS.gene33957:CDS | 35.0% |
! | GACAGCAAAGTCAATCTTTT+CGG | + | chr1.4:75007172-75007191 | MS.gene33957:intron | 35.0% |
!! | ATTTTGGAAAGCTACTGGAA+GGG | + | chr1.4:75008454-75008473 | MS.gene33957:CDS | 35.0% |
AACAGACTCATCTGAGAAGA+AGG | - | chr1.4:75006558-75006577 | None:intergenic | 40.0% | |
AATGCAGATAGATGCAAGCT+AGG | + | chr1.4:75008341-75008360 | MS.gene33957:intron | 40.0% | |
AATGTACCTTGAATGTCCCA+TGG | - | chr1.4:75008172-75008191 | None:intergenic | 40.0% | |
AATTACTGCAGGAAGAAGGA+TGG | + | chr1.4:75009165-75009184 | MS.gene33957:intron | 40.0% | |
ACACATAGCATAGCATAGCA+TGG | - | chr1.4:75007053-75007072 | None:intergenic | 40.0% | |
ACAGACTCATCTGAGAAGAA+GGG | - | chr1.4:75006557-75006576 | None:intergenic | 40.0% | |
ACCTTATGCTTATGAGTGAG+TGG | + | chr1.4:75007011-75007030 | MS.gene33957:intron | 40.0% | |
ATTACTGCAGGAAGAAGGAT+GGG | + | chr1.4:75009166-75009185 | MS.gene33957:intron | 40.0% | |
ATTGAACCATGGGACATTCA+AGG | + | chr1.4:75008163-75008182 | MS.gene33957:CDS | 40.0% | |
CACTCTCTCAACACTTAAGT+TGG | - | chr1.4:75007121-75007140 | None:intergenic | 40.0% | |
CCAACAGAAGAAGAACTTGT+AGG | + | chr1.4:75008067-75008086 | MS.gene33957:CDS | 40.0% | |
CCTACAAGTTCTTCTTCTGT+TGG | - | chr1.4:75008070-75008089 | None:intergenic | 40.0% | |
GATATGAGCAACAGAATGAG+TGG | + | chr1.4:75008363-75008382 | MS.gene33957:CDS | 40.0% | |
GTGAGTTAATCTTCCTGTTG+AGG | - | chr1.4:75008099-75008118 | None:intergenic | 40.0% | |
GTTGGATGAAATCTAAACCC+TGG | - | chr1.4:75008052-75008071 | None:intergenic | 40.0% | |
TCAGGAGAGATCATCATCAA+TGG | + | chr1.4:75008006-75008025 | MS.gene33957:intron | 40.0% | |
TCCACTCACTCATAAGCATA+AGG | - | chr1.4:75007015-75007034 | None:intergenic | 40.0% | |
! | AACGATTGTTTTCCACAGGA+AGG | + | chr1.4:75007082-75007101 | MS.gene33957:intron | 40.0% |
! | CTAAAATAACTTGCCTGTGG+AGG | - | chr1.4:75008614-75008633 | None:intergenic | 40.0% |
! | GATCAACGATTGTTTTCCAC+AGG | + | chr1.4:75007078-75007097 | MS.gene33957:intron | 40.0% |
! | GGAGTCTGATGGAAATGTTT+TGG | + | chr1.4:75006779-75006798 | MS.gene33957:intron | 40.0% |
! | TTGTAGGGTATTACCTCAAC+AGG | + | chr1.4:75008083-75008102 | MS.gene33957:CDS | 40.0% |
!! | GATTTTGGAAAGCTACTGGA+AGG | + | chr1.4:75008453-75008472 | MS.gene33957:CDS | 40.0% |
!! | TCTCTCAACACTTAAGTTGG+TGG | - | chr1.4:75007118-75007137 | None:intergenic | 40.0% |
ATGGAATCATGTGTACCTCC+AGG | + | chr1.4:75008031-75008050 | MS.gene33957:CDS | 45.0% | |
CAAAATTGGCAGACCATGTG+TGG | - | chr1.4:75007355-75007374 | None:intergenic | 45.0% | |
GAGAAATTCTTAGGTGGTCC+AGG | + | chr1.4:75007486-75007505 | MS.gene33957:intron | 45.0% | |
GCACATGCTGCACAATTGTT+GGG | + | chr1.4:75007380-75007399 | MS.gene33957:intron | 45.0% | |
GGATGAAATCTAAACCCTGG+AGG | - | chr1.4:75008049-75008068 | None:intergenic | 45.0% | |
TGCACATGCTGCACAATTGT+TGG | + | chr1.4:75007379-75007398 | MS.gene33957:intron | 45.0% | |
TGGAATCATGTGTACCTCCA+GGG | + | chr1.4:75008032-75008051 | MS.gene33957:CDS | 45.0% | |
TTTCCAAAATCCAGCAGCAG+TGG | - | chr1.4:75008444-75008463 | None:intergenic | 45.0% | |
! | CACACATGGTCTGCCAATTT+TGG | + | chr1.4:75007353-75007372 | MS.gene33957:intron | 45.0% |
! | TTAATGGTGGGATCCACACA+TGG | + | chr1.4:75007339-75007358 | MS.gene33957:intron | 45.0% |
!! | CTCAACACTTAAGTTGGTGG+TGG | - | chr1.4:75007115-75007134 | None:intergenic | 45.0% |
!! | GCTGGATTTTGGAAAGCTAC+TGG | + | chr1.4:75008449-75008468 | MS.gene33957:CDS | 45.0% |
ACTAATAGAGCCACTGCTGC+TGG | + | chr1.4:75008431-75008450 | MS.gene33957:CDS | 50.0% | |
TTCTGAACATGGTCCTCCAC+AGG | + | chr1.4:75008598-75008617 | MS.gene33957:CDS | 50.0% | |
!! | AAGAAGGATGGGTTGTGTGC+AGG | + | chr1.4:75009177-75009196 | MS.gene33957:CDS | 50.0% |
!! | AGAAGGATGGGTTGTGTGCA+GGG | + | chr1.4:75009178-75009197 | MS.gene33957:CDS | 50.0% |
GGTGGAGAAAGACCTTCCTG+TGG | - | chr1.4:75007097-75007116 | None:intergenic | 55.0% | |
TACAAGGGACGTGCCCCAAA+TGG | + | chr1.4:75008533-75008552 | MS.gene33957:CDS | 55.0% | |
! | GAGCCACTGCTGCTGGATTT+TGG | + | chr1.4:75008438-75008457 | MS.gene33957:CDS | 55.0% |
AGGGACGTGCCCCAAATGGA+AGG | + | chr1.4:75008537-75008556 | MS.gene33957:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 75006437 | 75009207 | 75006437 | ID=MS.gene33957 |
chr1.4 | mRNA | 75006437 | 75009207 | 75006437 | ID=MS.gene33957.t1;Parent=MS.gene33957 |
chr1.4 | exon | 75006437 | 75006457 | 75006437 | ID=MS.gene33957.t1.exon1;Parent=MS.gene33957.t1 |
chr1.4 | CDS | 75006437 | 75006457 | 75006437 | ID=cds.MS.gene33957.t1;Parent=MS.gene33957.t1 |
chr1.4 | exon | 75008010 | 75008184 | 75008010 | ID=MS.gene33957.t1.exon2;Parent=MS.gene33957.t1 |
chr1.4 | CDS | 75008010 | 75008184 | 75008010 | ID=cds.MS.gene33957.t1;Parent=MS.gene33957.t1 |
chr1.4 | exon | 75008348 | 75008623 | 75008348 | ID=MS.gene33957.t1.exon3;Parent=MS.gene33957.t1 |
chr1.4 | CDS | 75008348 | 75008623 | 75008348 | ID=cds.MS.gene33957.t1;Parent=MS.gene33957.t1 |
chr1.4 | exon | 75009176 | 75009207 | 75009176 | ID=MS.gene33957.t1.exon4;Parent=MS.gene33957.t1 |
chr1.4 | CDS | 75009176 | 75009207 | 75009176 | ID=cds.MS.gene33957.t1;Parent=MS.gene33957.t1 |
Gene Sequence |
Protein sequence |