Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34041.t1 | RHN81490.1 | 69.1 | 621 | 9 | 3 | 1 | 440 | 76 | 694 | 1.20E-230 | 808.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34041.t1 | Q93YR9 | 66.8 | 386 | 115 | 5 | 1 | 380 | 1 | 379 | 1.2e-146 | 521.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34041.t1 | G7I382 | 69.1 | 621 | 9 | 3 | 1 | 440 | 1 | 619 | 8.3e-231 | 808.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene34041.t1 | TF | B3-ARF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34041.t1 | MTR_1g094960 | 98.158 | 380 | 5 | 2 | 1 | 380 | 1 | 378 | 0.0 | 785 |
| MS.gene34041.t1 | MTR_1g094960 | 94.915 | 59 | 3 | 0 | 382 | 440 | 561 | 619 | 8.44e-26 | 110 |
| MS.gene34041.t1 | MTR_2g094570 | 68.966 | 377 | 104 | 6 | 10 | 380 | 2 | 371 | 0.0 | 521 |
| MS.gene34041.t1 | MTR_2g094570 | 68.966 | 377 | 104 | 6 | 10 | 380 | 2 | 371 | 0.0 | 521 |
| MS.gene34041.t1 | MTR_2g094570 | 68.966 | 377 | 104 | 6 | 10 | 380 | 58 | 427 | 4.07e-180 | 521 |
| MS.gene34041.t1 | MTR_4g058930 | 69.895 | 382 | 102 | 7 | 8 | 380 | 1 | 378 | 4.09e-178 | 513 |
| MS.gene34041.t1 | MTR_4g058930 | 69.895 | 382 | 102 | 7 | 8 | 380 | 1 | 378 | 9.00e-178 | 513 |
| MS.gene34041.t1 | MTR_1g064430 | 64.921 | 382 | 113 | 6 | 13 | 380 | 21 | 395 | 1.30e-169 | 492 |
| MS.gene34041.t1 | MTR_1g064430 | 64.921 | 382 | 113 | 6 | 13 | 380 | 34 | 408 | 1.73e-169 | 493 |
| MS.gene34041.t1 | MTR_7g101280 | 58.594 | 384 | 143 | 7 | 10 | 380 | 22 | 402 | 7.60e-150 | 441 |
| MS.gene34041.t1 | MTR_0041s0110 | 58.594 | 384 | 143 | 7 | 10 | 380 | 22 | 402 | 7.60e-150 | 441 |
| MS.gene34041.t1 | MTR_7g101275 | 54.227 | 343 | 119 | 5 | 28 | 369 | 1 | 306 | 1.28e-124 | 367 |
| MS.gene34041.t1 | MTR_0041s0120 | 52.260 | 354 | 121 | 8 | 28 | 369 | 1 | 318 | 8.89e-118 | 350 |
| MS.gene34041.t1 | MTR_3g073420 | 46.214 | 383 | 166 | 6 | 16 | 380 | 16 | 376 | 4.46e-108 | 332 |
| MS.gene34041.t1 | MTR_5g061220 | 42.487 | 386 | 181 | 10 | 7 | 380 | 7 | 363 | 6.13e-90 | 283 |
| MS.gene34041.t1 | MTR_4g124900 | 41.160 | 362 | 166 | 8 | 14 | 368 | 18 | 339 | 1.56e-82 | 275 |
| MS.gene34041.t1 | MTR_4g124900 | 41.160 | 362 | 166 | 8 | 14 | 368 | 18 | 339 | 1.63e-82 | 275 |
| MS.gene34041.t1 | MTR_5g076270 | 40.761 | 368 | 171 | 7 | 9 | 368 | 14 | 342 | 1.04e-81 | 269 |
| MS.gene34041.t1 | MTR_2g024430 | 40.584 | 377 | 148 | 9 | 16 | 376 | 17 | 333 | 9.42e-81 | 258 |
| MS.gene34041.t1 | MTR_2g014770 | 38.325 | 394 | 193 | 8 | 15 | 400 | 51 | 402 | 3.27e-79 | 257 |
| MS.gene34041.t1 | MTR_5g040880 | 39.267 | 382 | 163 | 9 | 11 | 380 | 3 | 327 | 4.15e-79 | 254 |
| MS.gene34041.t1 | MTR_3g064050 | 40.385 | 364 | 170 | 7 | 13 | 368 | 20 | 344 | 7.41e-79 | 261 |
| MS.gene34041.t1 | MTR_2g014770 | 38.325 | 394 | 193 | 8 | 15 | 400 | 51 | 402 | 1.73e-78 | 257 |
| MS.gene34041.t1 | MTR_2g018690 | 39.130 | 368 | 177 | 7 | 9 | 368 | 13 | 341 | 5.59e-78 | 260 |
| MS.gene34041.t1 | MTR_4g088210 | 40.217 | 368 | 170 | 8 | 12 | 368 | 33 | 361 | 4.63e-77 | 253 |
| MS.gene34041.t1 | MTR_4g088210 | 40.217 | 368 | 170 | 8 | 12 | 368 | 33 | 361 | 5.14e-77 | 254 |
| MS.gene34041.t1 | MTR_8g079492 | 38.692 | 367 | 179 | 7 | 9 | 368 | 13 | 340 | 1.22e-76 | 256 |
| MS.gene34041.t1 | MTR_8g079492 | 38.692 | 367 | 179 | 7 | 9 | 368 | 13 | 340 | 1.26e-76 | 256 |
| MS.gene34041.t1 | MTR_1g024025 | 40.437 | 366 | 166 | 10 | 14 | 369 | 38 | 361 | 1.05e-74 | 254 |
| MS.gene34041.t1 | MTR_5g082140 | 37.598 | 383 | 178 | 8 | 8 | 380 | 1 | 332 | 4.01e-73 | 237 |
| MS.gene34041.t1 | MTR_5g040740 | 39.037 | 374 | 155 | 10 | 16 | 374 | 9 | 324 | 6.83e-73 | 235 |
| MS.gene34041.t1 | MTR_2g093740 | 39.566 | 369 | 162 | 8 | 19 | 368 | 56 | 382 | 1.11e-72 | 242 |
| MS.gene34041.t1 | MTR_2g093740 | 39.566 | 369 | 162 | 8 | 19 | 368 | 56 | 382 | 4.07e-72 | 241 |
| MS.gene34041.t1 | MTR_2g093740 | 39.566 | 369 | 162 | 8 | 19 | 368 | 56 | 382 | 7.90e-72 | 241 |
| MS.gene34041.t1 | MTR_1g058210 | 35.884 | 379 | 192 | 5 | 8 | 380 | 1 | 334 | 1.52e-71 | 233 |
| MS.gene34041.t1 | MTR_2g043250 | 39.503 | 362 | 172 | 10 | 14 | 368 | 18 | 339 | 2.46e-71 | 244 |
| MS.gene34041.t1 | MTR_8g101360 | 39.566 | 369 | 174 | 8 | 9 | 368 | 21 | 349 | 6.84e-71 | 243 |
| MS.gene34041.t1 | MTR_8g100050 | 37.632 | 380 | 186 | 7 | 10 | 380 | 50 | 387 | 2.97e-70 | 236 |
| MS.gene34041.t1 | MTR_8g100050 | 37.632 | 380 | 186 | 7 | 10 | 380 | 50 | 387 | 1.57e-69 | 236 |
| MS.gene34041.t1 | MTR_4g060460 | 39.510 | 367 | 165 | 8 | 19 | 368 | 54 | 380 | 4.83e-69 | 234 |
| MS.gene34041.t1 | MTR_2g093740 | 38.220 | 382 | 162 | 9 | 19 | 368 | 56 | 395 | 5.06e-69 | 232 |
| MS.gene34041.t1 | MTR_4g060460 | 39.510 | 367 | 165 | 8 | 19 | 368 | 54 | 380 | 5.23e-69 | 234 |
| MS.gene34041.t1 | MTR_2g093740 | 38.220 | 382 | 162 | 9 | 19 | 368 | 56 | 395 | 2.16e-68 | 231 |
| MS.gene34041.t1 | MTR_2g093740 | 38.220 | 382 | 162 | 9 | 19 | 368 | 56 | 395 | 3.36e-68 | 232 |
| MS.gene34041.t1 | MTR_2g005240 | 37.008 | 381 | 184 | 7 | 11 | 380 | 15 | 350 | 1.41e-66 | 225 |
| MS.gene34041.t1 | MTR_4g021580 | 38.235 | 374 | 180 | 8 | 15 | 380 | 15 | 345 | 7.19e-66 | 222 |
| MS.gene34041.t1 | MTR_4g021580 | 38.235 | 374 | 180 | 8 | 15 | 380 | 15 | 345 | 1.26e-65 | 222 |
| MS.gene34041.t1 | MTR_2g006270 | 37.027 | 370 | 175 | 12 | 19 | 380 | 13 | 332 | 2.67e-65 | 216 |
| MS.gene34041.t1 | MTR_8g027440 | 40.055 | 362 | 163 | 10 | 16 | 368 | 26 | 342 | 5.54e-60 | 207 |
| MS.gene34041.t1 | MTR_7g062540 | 36.828 | 372 | 180 | 9 | 8 | 369 | 3 | 329 | 6.89e-60 | 207 |
| MS.gene34041.t1 | MTR_8g079492 | 39.661 | 295 | 138 | 5 | 75 | 368 | 3 | 258 | 1.57e-59 | 208 |
| MS.gene34041.t1 | MTR_2g006380 | 33.858 | 381 | 180 | 14 | 19 | 386 | 20 | 341 | 5.25e-55 | 189 |
| MS.gene34041.t1 | MTR_5g061890 | 33.652 | 419 | 203 | 16 | 16 | 415 | 9 | 371 | 3.74e-54 | 186 |
| MS.gene34041.t1 | MTR_5g060780 | 34.301 | 379 | 179 | 14 | 16 | 380 | 9 | 331 | 9.71e-54 | 184 |
| MS.gene34041.t1 | MTR_2g093740 | 41.833 | 251 | 109 | 3 | 119 | 368 | 38 | 252 | 1.69e-53 | 189 |
| MS.gene34041.t1 | MTR_2g093740 | 41.833 | 251 | 109 | 3 | 119 | 368 | 38 | 252 | 2.69e-53 | 189 |
| MS.gene34041.t1 | MTR_5g460920 | 33.773 | 379 | 181 | 13 | 16 | 380 | 9 | 331 | 1.07e-52 | 182 |
| MS.gene34041.t1 | MTR_2g093740 | 39.773 | 264 | 109 | 4 | 119 | 368 | 38 | 265 | 7.56e-50 | 179 |
| MS.gene34041.t1 | MTR_2g093740 | 39.773 | 264 | 109 | 4 | 119 | 368 | 38 | 265 | 1.00e-49 | 179 |
| MS.gene34041.t1 | MTR_5g062970 | 41.327 | 196 | 107 | 3 | 16 | 207 | 35 | 226 | 7.63e-48 | 164 |
| MS.gene34041.t1 | MTR_8g446900 | 31.707 | 328 | 180 | 7 | 53 | 380 | 1 | 284 | 2.81e-45 | 161 |
| MS.gene34041.t1 | MTR_5g060630 | 32.170 | 401 | 193 | 15 | 16 | 380 | 9 | 366 | 1.10e-43 | 160 |
| MS.gene34041.t1 | MTR_5g460740 | 32.170 | 401 | 193 | 15 | 16 | 380 | 9 | 366 | 1.10e-43 | 160 |
| MS.gene34041.t1 | MTR_5g060770 | 34.437 | 151 | 87 | 4 | 63 | 213 | 6 | 144 | 1.58e-17 | 84.0 |
| MS.gene34041.t1 | MTR_5g062960 | 41.121 | 107 | 56 | 3 | 278 | 380 | 1 | 104 | 1.52e-16 | 78.2 |
| MS.gene34041.t1 | MTR_3g064050 | 45.000 | 80 | 42 | 2 | 290 | 368 | 29 | 107 | 3.14e-13 | 72.0 |
| MS.gene34041.t1 | MTR_5g032260 | 40.426 | 94 | 54 | 2 | 278 | 370 | 49 | 141 | 1.49e-12 | 69.3 |
| MS.gene34041.t1 | MTR_1g058350 | 35.780 | 109 | 67 | 2 | 114 | 219 | 71 | 179 | 2.87e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34041.t1 | AT4G30080 | 67.876 | 386 | 111 | 5 | 1 | 380 | 1 | 379 | 0.0 | 535 |
| MS.gene34041.t1 | AT2G28350 | 67.268 | 388 | 93 | 7 | 13 | 380 | 4 | 377 | 1.73e-176 | 509 |
| MS.gene34041.t1 | AT2G28350 | 67.268 | 388 | 93 | 7 | 13 | 380 | 4 | 377 | 2.03e-176 | 510 |
| MS.gene34041.t1 | AT1G77850 | 45.946 | 370 | 183 | 6 | 16 | 380 | 16 | 373 | 8.39e-108 | 330 |
| MS.gene34041.t1 | AT1G77850 | 45.946 | 370 | 183 | 6 | 16 | 380 | 16 | 373 | 8.86e-108 | 331 |
| MS.gene34041.t1 | AT5G37020 | 40.385 | 364 | 170 | 7 | 13 | 368 | 16 | 340 | 6.66e-81 | 265 |
| MS.gene34041.t1 | AT5G37020 | 40.385 | 364 | 170 | 7 | 13 | 368 | 16 | 340 | 1.69e-80 | 265 |
| MS.gene34041.t1 | AT1G19220 | 39.892 | 371 | 176 | 8 | 5 | 368 | 9 | 339 | 6.64e-79 | 265 |
| MS.gene34041.t1 | AT1G30330 | 40.379 | 369 | 172 | 8 | 9 | 368 | 14 | 343 | 1.18e-77 | 259 |
| MS.gene34041.t1 | AT1G30330 | 40.379 | 369 | 172 | 8 | 9 | 368 | 14 | 343 | 1.18e-77 | 259 |
| MS.gene34041.t1 | AT1G30330 | 39.835 | 364 | 172 | 7 | 13 | 368 | 17 | 341 | 2.26e-77 | 259 |
| MS.gene34041.t1 | AT5G20730 | 39.835 | 364 | 170 | 9 | 13 | 368 | 18 | 340 | 2.79e-76 | 258 |
| MS.gene34041.t1 | AT5G20730 | 39.726 | 365 | 170 | 10 | 13 | 368 | 18 | 341 | 7.72e-75 | 254 |
| MS.gene34041.t1 | AT5G20730 | 39.726 | 365 | 170 | 10 | 13 | 368 | 18 | 341 | 8.06e-75 | 254 |
| MS.gene34041.t1 | AT1G19850 | 40.379 | 369 | 169 | 10 | 11 | 369 | 46 | 373 | 9.36e-75 | 251 |
| MS.gene34041.t1 | AT1G19850 | 40.379 | 369 | 169 | 10 | 11 | 369 | 35 | 362 | 1.04e-74 | 251 |
| MS.gene34041.t1 | AT2G33860 | 38.958 | 403 | 186 | 10 | 15 | 404 | 52 | 407 | 2.61e-74 | 244 |
| MS.gene34041.t1 | AT5G60450 | 37.852 | 391 | 182 | 7 | 8 | 380 | 30 | 377 | 1.63e-72 | 243 |
| MS.gene34041.t1 | AT5G60450 | 38.320 | 381 | 174 | 7 | 18 | 380 | 64 | 401 | 2.55e-71 | 240 |
| MS.gene34041.t1 | AT5G62000 | 37.333 | 375 | 188 | 6 | 13 | 380 | 55 | 389 | 3.01e-69 | 235 |
| MS.gene34041.t1 | AT5G62000 | 37.333 | 375 | 188 | 6 | 13 | 380 | 55 | 389 | 4.27e-69 | 235 |
| MS.gene34041.t1 | AT5G62000 | 37.333 | 375 | 188 | 6 | 13 | 380 | 55 | 389 | 4.27e-69 | 235 |
| MS.gene34041.t1 | AT5G62000 | 37.333 | 375 | 188 | 6 | 13 | 380 | 55 | 389 | 4.27e-69 | 235 |
| MS.gene34041.t1 | AT5G62000 | 37.333 | 375 | 188 | 6 | 13 | 380 | 55 | 389 | 4.27e-69 | 235 |
| MS.gene34041.t1 | AT1G59750 | 38.108 | 370 | 179 | 7 | 19 | 380 | 22 | 349 | 8.30e-67 | 225 |
| MS.gene34041.t1 | AT1G59750 | 38.108 | 370 | 179 | 7 | 19 | 380 | 22 | 349 | 9.16e-67 | 225 |
| MS.gene34041.t1 | AT1G59750 | 38.108 | 370 | 179 | 7 | 19 | 380 | 22 | 349 | 9.46e-67 | 225 |
| MS.gene34041.t1 | AT1G59750 | 38.108 | 370 | 179 | 7 | 19 | 380 | 22 | 349 | 9.46e-67 | 225 |
| MS.gene34041.t1 | AT2G46530 | 38.992 | 377 | 170 | 13 | 16 | 380 | 18 | 346 | 2.94e-65 | 220 |
| MS.gene34041.t1 | AT2G46530 | 38.992 | 377 | 170 | 13 | 16 | 380 | 39 | 367 | 6.10e-65 | 219 |
| MS.gene34041.t1 | AT3G61830 | 35.782 | 422 | 213 | 10 | 7 | 416 | 13 | 388 | 2.15e-64 | 218 |
| MS.gene34041.t1 | AT4G23980 | 36.364 | 407 | 198 | 12 | 16 | 405 | 9 | 371 | 1.97e-63 | 216 |
| MS.gene34041.t1 | AT4G23980 | 37.968 | 374 | 179 | 11 | 16 | 380 | 9 | 338 | 2.74e-63 | 216 |
| MS.gene34041.t1 | AT1G35540 | 34.719 | 409 | 203 | 13 | 12 | 404 | 20 | 380 | 4.42e-56 | 196 |
| MS.gene34041.t1 | AT5G37020 | 39.437 | 284 | 132 | 5 | 86 | 368 | 1 | 245 | 4.68e-56 | 197 |
| MS.gene34041.t1 | AT1G35520 | 36.164 | 365 | 177 | 10 | 12 | 368 | 20 | 336 | 1.18e-53 | 189 |
| MS.gene34041.t1 | AT1G35240 | 35.519 | 366 | 178 | 11 | 12 | 368 | 20 | 336 | 2.17e-53 | 188 |
| MS.gene34041.t1 | AT2G33860 | 40.070 | 287 | 133 | 5 | 119 | 404 | 2 | 250 | 3.68e-53 | 184 |
| MS.gene34041.t1 | AT1G34310 | 35.946 | 370 | 181 | 9 | 19 | 380 | 27 | 348 | 6.78e-53 | 187 |
| MS.gene34041.t1 | AT3G61830 | 36.464 | 362 | 179 | 9 | 60 | 416 | 22 | 337 | 1.58e-52 | 185 |
| MS.gene34041.t1 | AT1G34170 | 34.278 | 388 | 189 | 13 | 19 | 388 | 25 | 364 | 2.62e-52 | 183 |
| MS.gene34041.t1 | AT1G34390 | 35.519 | 366 | 176 | 12 | 12 | 368 | 20 | 334 | 3.54e-52 | 185 |
| MS.gene34041.t1 | AT1G34410 | 35.068 | 365 | 181 | 10 | 12 | 368 | 20 | 336 | 1.96e-51 | 183 |
| MS.gene34041.t1 | AT2G46530 | 40.226 | 266 | 114 | 8 | 118 | 380 | 36 | 259 | 8.23e-47 | 169 |
| MS.gene34041.t1 | AT1G34170 | 32.732 | 388 | 169 | 13 | 19 | 388 | 25 | 338 | 9.30e-45 | 162 |
| MS.gene34041.t1 | AT1G34170 | 32.216 | 388 | 171 | 12 | 19 | 388 | 25 | 338 | 5.04e-44 | 162 |
| MS.gene34041.t1 | AT1G43950 | 40.465 | 215 | 108 | 7 | 12 | 218 | 20 | 222 | 5.16e-39 | 140 |
| MS.gene34041.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 113 | 219 | 32 | 142 | 7.73e-12 | 63.9 |
| MS.gene34041.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 113 | 219 | 32 | 142 | 7.73e-12 | 63.9 |
| MS.gene34041.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 113 | 219 | 32 | 142 | 1.70e-11 | 64.7 |
| MS.gene34041.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 113 | 219 | 32 | 142 | 1.73e-11 | 64.3 |
| MS.gene34041.t1 | AT3G25730 | 32.824 | 131 | 76 | 2 | 119 | 247 | 183 | 303 | 1.75e-11 | 65.5 |
| MS.gene34041.t1 | AT2G46870 | 34.906 | 106 | 62 | 2 | 111 | 216 | 27 | 125 | 5.43e-11 | 63.9 |
| MS.gene34041.t1 | AT4G01500 | 33.654 | 104 | 66 | 1 | 119 | 222 | 36 | 136 | 7.02e-11 | 63.9 |
| MS.gene34041.t1 | AT1G01030 | 36.842 | 95 | 59 | 1 | 114 | 208 | 51 | 144 | 7.17e-11 | 63.9 |
Find 82 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAGGATTAGTTGGTTTA+TGG | 0.157206 | 1.4:+73912077 | MS.gene34041:CDS |
| TTTGAAGAAGATTGTTTCTT+TGG | 0.183552 | 1.4:+73911370 | MS.gene34041:CDS |
| GAGATCTTTGTGTTGGTATA+AGG | 0.249926 | 1.4:+73911710 | MS.gene34041:CDS |
| ACGTAGACTTCATCAGTTTC+AGG | 0.253211 | 1.4:-73911307 | None:intergenic |
| GAGAGGTGGAACACGGGTTT+TGG | 0.257788 | 1.4:-73911245 | None:intergenic |
| TTTGGTGGTGGTGGTTGTTC+TGG | 0.267175 | 1.4:+73911814 | MS.gene34041:CDS |
| TTCTCCTTGGCGCCTTCTTC+AGG | 0.267828 | 1.4:+73912146 | MS.gene34041:CDS |
| TGGAAACAATAATGGCTTAG+AGG | 0.299971 | 1.4:+73911390 | MS.gene34041:CDS |
| TTGAAACTGAGGATTCTTCT+AGG | 0.307810 | 1.4:+73912061 | MS.gene34041:CDS |
| TGTTTCTTTGGAAACAATAA+TGG | 0.309227 | 1.4:+73911382 | MS.gene34041:CDS |
| TCTAGGATTAGTTGGTTTAT+GGG | 0.316818 | 1.4:+73912078 | MS.gene34041:CDS |
| GCTGTAAACTGTGCTGTTAA+TGG | 0.368748 | 1.4:+73911916 | MS.gene34041:CDS |
| TGGAGGCTCTCCTTGGTATA+AGG | 0.368842 | 1.4:+73913507 | MS.gene34041:CDS |
| TTTCTAATTCTTCTAGTACT+TGG | 0.397904 | 1.4:+73911773 | MS.gene34041:CDS |
| ATGCAAATTCAATGGTGTTC+TGG | 0.400255 | 1.4:+73912018 | MS.gene34041:CDS |
| GGAGAATCAGGCCAACGAAT+TGG | 0.402668 | 1.4:-73912129 | None:intergenic |
| AGGATTCTTCTAGGATTAGT+TGG | 0.407748 | 1.4:+73912070 | MS.gene34041:CDS |
| TTCGTTGGCCTGATTCTCCT+TGG | 0.409284 | 1.4:+73912133 | MS.gene34041:CDS |
| TTAGCAATAATTGTTTGAAC+AGG | 0.414237 | 1.4:-73911541 | None:intergenic |
| AGAGCAAAGAAAGGTGGAAT+TGG | 0.414735 | 1.4:+73911733 | MS.gene34041:CDS |
| AGAAGGCGCCAAGGAGAATC+AGG | 0.419546 | 1.4:-73912141 | None:intergenic |
| AAATGGTGGTAATGATTTGA+TGG | 0.424677 | 1.4:+73911864 | MS.gene34041:CDS |
| CAACACAAGCCTGATCTTGT+TGG | 0.424795 | 1.4:+73913535 | MS.gene34041:CDS |
| CCATCAGAAGAATTCTCAAC+TGG | 0.442393 | 1.4:-73913487 | None:intergenic |
| AATGTCTTTGCAAAAGAAGC+TGG | 0.444449 | 1.4:-73911424 | None:intergenic |
| GAAACCTTAACACAAAATTC+AGG | 0.450898 | 1.4:-73911979 | None:intergenic |
| ATAGTCTCAGCACAGTATCT+AGG | 0.458408 | 1.4:-73911487 | None:intergenic |
| CTTCTGATGGAGGCTCTCCT+TGG | 0.459576 | 1.4:+73913500 | MS.gene34041:CDS |
| CGTAGACTTCATCAGTTTCA+GGG | 0.459745 | 1.4:-73911306 | None:intergenic |
| TCACCTTTGTTTGGTGGTGG+TGG | 0.463200 | 1.4:+73911805 | MS.gene34041:CDS |
| AGTGCTTAGATTCACAACTA+TGG | 0.464164 | 1.4:+73911119 | MS.gene34041:CDS |
| AACCGTGTATCACCTTTGTT+TGG | 0.470136 | 1.4:+73911796 | MS.gene34041:CDS |
| AAATGTTACTGCATTGTGTA+TGG | 0.470847 | 1.4:+73913564 | MS.gene34041:CDS |
| GCAATAATTGTTTGAACAGG+TGG | 0.472648 | 1.4:-73911538 | None:intergenic |
| AAGTTTAGACATATCTATAG+AGG | 0.484340 | 1.4:+73911586 | MS.gene34041:CDS |
| AATCACAAGAAGCTTGTTGC+TGG | 0.491007 | 1.4:+73911655 | MS.gene34041:CDS |
| AATCTGCAATGCAAATTCAA+TGG | 0.492272 | 1.4:+73912010 | MS.gene34041:CDS |
| GAAGAATCCTCAGTTTCAAA+AGG | 0.493790 | 1.4:-73912057 | None:intergenic |
| AATTCAGGAGTACTAGCTCT+TGG | 0.500520 | 1.4:-73911964 | None:intergenic |
| GTTTGTGGTTATGGATTCCA+TGG | 0.512063 | 1.4:+73911081 | MS.gene34041:CDS |
| CGTGTATCACCTTTGTTTGG+TGG | 0.513472 | 1.4:+73911799 | MS.gene34041:CDS |
| ATAATATTGTTACCTGAAGA+AGG | 0.514309 | 1.4:-73912158 | None:intergenic |
| CAACTATGGCACGCATGTGC+TGG | 0.516615 | 1.4:+73911133 | MS.gene34041:CDS |
| AAGAGTAGTTCTGTTTCTGA+AGG | 0.518025 | 1.4:+73913427 | MS.gene34041:CDS |
| GGAAACAATAATGGCTTAGA+GGG | 0.522828 | 1.4:+73911391 | MS.gene34041:CDS |
| GGTTGTTCTGGTTTCTTGTG+TGG | 0.523999 | 1.4:+73911826 | MS.gene34041:CDS |
| AAGATATGCATGGACAGTGT+TGG | 0.525936 | 1.4:+73911563 | MS.gene34041:CDS |
| GCAAAGAAAGGTGGAATTGG+TGG | 0.533246 | 1.4:+73911736 | MS.gene34041:CDS |
| TAATGATTTGATGGGAAAAG+TGG | 0.533977 | 1.4:+73911873 | MS.gene34041:CDS |
| CCAGTTGAGAATTCTTCTGA+TGG | 0.534523 | 1.4:+73913487 | MS.gene34041:CDS |
| GTATCACCTTTGTTTGGTGG+TGG | 0.534706 | 1.4:+73911802 | MS.gene34041:CDS |
| GAAAATGGAGATCTTTGTGT+TGG | 0.538803 | 1.4:+73911703 | MS.gene34041:CDS |
| TTCATAGCAGAGATTCTACA+AGG | 0.548674 | 1.4:-73911271 | None:intergenic |
| TGTTGTTGATCCTTATACCA+AGG | 0.550241 | 1.4:-73913517 | None:intergenic |
| GTTGTCAAAAGATGTCTCCT+TGG | 0.557297 | 1.4:-73911613 | None:intergenic |
| AAGAAAGGTGGAATTGGTGG+TGG | 0.559157 | 1.4:+73911739 | MS.gene34041:CDS |
| GCACGCATGTGCTGGTGCCA+TGG | 0.574468 | 1.4:+73911141 | MS.gene34041:CDS |
| ATAAGGAGAGCAAAGAAAGG+TGG | 0.575173 | 1.4:+73911727 | MS.gene34041:CDS |
| GGTATAAGGAGAGCAAAGAA+AGG | 0.576664 | 1.4:+73911724 | MS.gene34041:CDS |
| ATTATTGCTAAAGATATGCA+TGG | 0.591151 | 1.4:+73911553 | MS.gene34041:CDS |
| ATGTTCAAGATCCAATTCGT+TGG | 0.592882 | 1.4:+73912118 | MS.gene34041:CDS |
| GTTGAGAATTCTTCTGATGG+AGG | 0.594043 | 1.4:+73913490 | MS.gene34041:CDS |
| GAGATTCTACAAGGGATGAG+AGG | 0.595750 | 1.4:-73911262 | None:intergenic |
| TCTGCTGAATAATCCAACCT+AGG | 0.603231 | 1.4:-73911514 | None:intergenic |
| GCATGTTCTGCATGACCTTG+TGG | 0.603875 | 1.4:-73911202 | None:intergenic |
| ATGTGAAATGTGTAAACCCT+TGG | 0.607377 | 1.4:+73912837 | MS.gene34041:CDS |
| AATCTCTGCTATGAAATACA+TGG | 0.608031 | 1.4:+73911279 | MS.gene34041:CDS |
| AATGGTGGTAATGATTTGAT+GGG | 0.610306 | 1.4:+73911865 | MS.gene34041:CDS |
| CAACCACCACCACCAAACAA+AGG | 0.619361 | 1.4:-73911808 | None:intergenic |
| AAGGGATGAGAGGTGGAACA+CGG | 0.623921 | 1.4:-73911252 | None:intergenic |
| CACCAAACAAAGGTGATACA+CGG | 0.628457 | 1.4:-73911798 | None:intergenic |
| ACACAATCTGATGCAAACAA+TGG | 0.631167 | 1.4:+73911448 | MS.gene34041:CDS |
| ATTCTACAAGGGATGAGAGG+TGG | 0.633006 | 1.4:-73911259 | None:intergenic |
| AATGATTTGATGGGAAAAGT+GGG | 0.635170 | 1.4:+73911874 | MS.gene34041:CDS |
| GTTACCTGAAGAAGGCGCCA+AGG | 0.651106 | 1.4:-73912150 | None:intergenic |
| GAGTGGTGGCATTTGAACCA+TGG | 0.651177 | 1.4:-73911158 | None:intergenic |
| AGGGATGAGAGGTGGAACAC+GGG | 0.668889 | 1.4:-73911251 | None:intergenic |
| AAAGTCTTCTACTTTCCACA+AGG | 0.669890 | 1.4:+73911187 | MS.gene34041:CDS |
| TCATAGCAGAGATTCTACAA+GGG | 0.672161 | 1.4:-73911270 | None:intergenic |
| TCTGATGCAAACAATGGTGG+TGG | 0.672693 | 1.4:+73911454 | MS.gene34041:CDS |
| CAATCTGATGCAAACAATGG+TGG | 0.683286 | 1.4:+73911451 | MS.gene34041:CDS |
| ATATCTATAGAGGAACACCA+AGG | 0.796890 | 1.4:+73911596 | MS.gene34041:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCCAAATAACAAAATA+TGG | - | chr1.4:73913372-73913391 | None:intergenic | 15.0% |
| !! | CAAATAACAAAATATGGTTA+TGG | - | chr1.4:73913366-73913385 | None:intergenic | 20.0% |
| !! | TAATTTAATTCTTGCTTAAC+AGG | - | chr1.4:73912507-73912526 | None:intergenic | 20.0% |
| !!! | AAATCAGATGGATTATTATT+TGG | - | chr1.4:73913118-73913137 | None:intergenic | 20.0% |
| !!! | CATAACCATATTTTGTTATT+TGG | + | chr1.4:73913364-73913383 | MS.gene34041:intron | 20.0% |
| ! | AAAATATGGTTATGGTTATG+GGG | - | chr1.4:73913358-73913377 | None:intergenic | 25.0% |
| ! | AACTTAATAACTTTCTCTCA+AGG | - | chr1.4:73912695-73912714 | None:intergenic | 25.0% |
| ! | AAGTTTAGACATATCTATAG+AGG | + | chr1.4:73911586-73911605 | MS.gene34041:CDS | 25.0% |
| ! | ACAAAATATGGTTATGGTTA+TGG | - | chr1.4:73913360-73913379 | None:intergenic | 25.0% |
| ! | ATAATATTGTTACCTGAAGA+AGG | - | chr1.4:73912161-73912180 | None:intergenic | 25.0% |
| ! | ATTATTGCTAAAGATATGCA+TGG | + | chr1.4:73911553-73911572 | MS.gene34041:CDS | 25.0% |
| ! | CAAAATATGGTTATGGTTAT+GGG | - | chr1.4:73913359-73913378 | None:intergenic | 25.0% |
| ! | GTAATTGAGAAGATTAATGT+TGG | - | chr1.4:73913005-73913024 | None:intergenic | 25.0% |
| ! | TGATTTATGAGGTGAAAATA+TGG | - | chr1.4:73912947-73912966 | None:intergenic | 25.0% |
| ! | TTAGCAATAATTGTTTGAAC+AGG | - | chr1.4:73911544-73911563 | None:intergenic | 25.0% |
| ! | TTTCTAATTCTTCTAGTACT+TGG | + | chr1.4:73911773-73911792 | MS.gene34041:CDS | 25.0% |
| !! | AAATTCTGGTCAAAGTTTTA+AGG | + | chr1.4:73913309-73913328 | MS.gene34041:intron | 25.0% |
| !! | ATTGTTATTGATACTCTTGT+AGG | - | chr1.4:73913242-73913261 | None:intergenic | 25.0% |
| !! | TGTTTCTTTGGAAACAATAA+TGG | + | chr1.4:73911382-73911401 | MS.gene34041:CDS | 25.0% |
| !! | TTGTTATTGATACTCTTGTA+GGG | - | chr1.4:73913241-73913260 | None:intergenic | 25.0% |
| !! | TTTGAAGAAGATTGTTTCTT+TGG | + | chr1.4:73911370-73911389 | MS.gene34041:CDS | 25.0% |
| !!! | TTCACATTTTGAAGTAAATC+TGG | - | chr1.4:73912824-73912843 | None:intergenic | 25.0% |
| AAATGTTACTGCATTGTGTA+TGG | + | chr1.4:73913564-73913583 | MS.gene34041:CDS | 30.0% | |
| AATCTCTGCTATGAAATACA+TGG | + | chr1.4:73911279-73911298 | MS.gene34041:CDS | 30.0% | |
| AATCTGCAATGCAAATTCAA+TGG | + | chr1.4:73912010-73912029 | MS.gene34041:CDS | 30.0% | |
| AATGAGAACAGAAAAAATGG+TGG | + | chr1.4:73911850-73911869 | MS.gene34041:CDS | 30.0% | |
| AATGATTTGATGGGAAAAGT+GGG | + | chr1.4:73911874-73911893 | MS.gene34041:CDS | 30.0% | |
| AATTCAGTGCATCAATAAGA+TGG | + | chr1.4:73912340-73912359 | MS.gene34041:intron | 30.0% | |
| AGACTAATTCAACTAACCAA+GGG | - | chr1.4:73912856-73912875 | None:intergenic | 30.0% | |
| AGATTAATGTTGGAGATTGA+TGG | - | chr1.4:73912995-73913014 | None:intergenic | 30.0% | |
| ATAAACCTTGGTTTCTTTCT+TGG | - | chr1.4:73912917-73912936 | None:intergenic | 30.0% | |
| ATCATCAACAACCTATAACT+AGG | + | chr1.4:73913203-73913222 | MS.gene34041:intron | 30.0% | |
| GAAACCTTAACACAAAATTC+AGG | - | chr1.4:73911982-73912001 | None:intergenic | 30.0% | |
| GGAAATGAGAACAGAAAAAA+TGG | + | chr1.4:73911847-73911866 | MS.gene34041:CDS | 30.0% | |
| TAAGTTTGTACCTACTTACT+TGG | + | chr1.4:73912709-73912728 | MS.gene34041:intron | 30.0% | |
| TAATGATTTGATGGGAAAAG+TGG | + | chr1.4:73911873-73911892 | MS.gene34041:CDS | 30.0% | |
| TATGGATCTTGAATAAACCT+TGG | - | chr1.4:73912929-73912948 | None:intergenic | 30.0% | |
| TTGAAGGGAATTAAATCAGA+TGG | - | chr1.4:73913130-73913149 | None:intergenic | 30.0% | |
| ! | AAATGGTGGTAATGATTTGA+TGG | + | chr1.4:73911864-73911883 | MS.gene34041:CDS | 30.0% |
| ! | AATGGTGGTAATGATTTGAT+GGG | + | chr1.4:73911865-73911884 | MS.gene34041:CDS | 30.0% |
| ! | CTAACTCGTTTTCTCTTAAA+GGG | - | chr1.4:73911348-73911367 | None:intergenic | 30.0% |
| ! | TAACTCGTTTTCTCTTAAAG+GGG | - | chr1.4:73911347-73911366 | None:intergenic | 30.0% |
| ! | TACTCCTGAATTTTGTGTTA+AGG | + | chr1.4:73911975-73911994 | MS.gene34041:CDS | 30.0% |
| ! | TCTAACTCGTTTTCTCTTAA+AGG | - | chr1.4:73911349-73911368 | None:intergenic | 30.0% |
| ! | TGTTAATGGAAGATCTTTTG+AGG | + | chr1.4:73911930-73911949 | MS.gene34041:CDS | 30.0% |
| ! | TTTATGATGTCATGTTTTCC+AGG | + | chr1.4:73912784-73912803 | MS.gene34041:intron | 30.0% |
| !! | TCTAGGATTAGTTGGTTTAT+GGG | + | chr1.4:73912078-73912097 | MS.gene34041:CDS | 30.0% |
| !! | TTCTAGGATTAGTTGGTTTA+TGG | + | chr1.4:73912077-73912096 | MS.gene34041:CDS | 30.0% |
| AAAGTCTTCTACTTTCCACA+AGG | + | chr1.4:73911187-73911206 | MS.gene34041:CDS | 35.0% | |
| AATGGTGAGAGATTGAAGTT+TGG | - | chr1.4:73912887-73912906 | None:intergenic | 35.0% | |
| AATGTCTTTGCAAAAGAAGC+TGG | - | chr1.4:73911427-73911446 | None:intergenic | 35.0% | |
| ACACAATCTGATGCAAACAA+TGG | + | chr1.4:73911448-73911467 | MS.gene34041:CDS | 35.0% | |
| AGTGCTTAGATTCACAACTA+TGG | + | chr1.4:73911119-73911138 | MS.gene34041:CDS | 35.0% | |
| ATATCTATAGAGGAACACCA+AGG | + | chr1.4:73911596-73911615 | MS.gene34041:CDS | 35.0% | |
| ATGCAAATTCAATGGTGTTC+TGG | + | chr1.4:73912018-73912037 | MS.gene34041:CDS | 35.0% | |
| ATGTGAAATGTGTAAACCCT+TGG | + | chr1.4:73912837-73912856 | MS.gene34041:CDS | 35.0% | |
| ATGTTCAAGATCCAATTCGT+TGG | + | chr1.4:73912118-73912137 | MS.gene34041:CDS | 35.0% | |
| ATTCTAGCAAGTAGCAACTA+TGG | - | chr1.4:73912663-73912682 | None:intergenic | 35.0% | |
| CTACAACAAGACATGTTTCT+TGG | + | chr1.4:73913157-73913176 | MS.gene34041:intron | 35.0% | |
| CTATGGTAGATAGTACTAGT+AGG | - | chr1.4:73912646-73912665 | None:intergenic | 35.0% | |
| GAAAATGGAGATCTTTGTGT+TGG | + | chr1.4:73911703-73911722 | MS.gene34041:CDS | 35.0% | |
| GAAGAATCCTCAGTTTCAAA+AGG | - | chr1.4:73912060-73912079 | None:intergenic | 35.0% | |
| GACTCAGAATCAATCAAAGA+TGG | - | chr1.4:73912214-73912233 | None:intergenic | 35.0% | |
| GAGACTAATTCAACTAACCA+AGG | - | chr1.4:73912857-73912876 | None:intergenic | 35.0% | |
| GCAATAATTGTTTGAACAGG+TGG | - | chr1.4:73911541-73911560 | None:intergenic | 35.0% | |
| GGAAACAATAATGGCTTAGA+GGG | + | chr1.4:73911391-73911410 | MS.gene34041:CDS | 35.0% | |
| TCATAGCAGAGATTCTACAA+GGG | - | chr1.4:73911273-73911292 | None:intergenic | 35.0% | |
| TGGAAACAATAATGGCTTAG+AGG | + | chr1.4:73911390-73911409 | MS.gene34041:CDS | 35.0% | |
| TGTTGTTGATCCTTATACCA+AGG | - | chr1.4:73913520-73913539 | None:intergenic | 35.0% | |
| TTACTTCAAGCCAAGTAAGT+AGG | - | chr1.4:73912722-73912741 | None:intergenic | 35.0% | |
| TTCATAGCAGAGATTCTACA+AGG | - | chr1.4:73911274-73911293 | None:intergenic | 35.0% | |
| TTGAAACTGAGGATTCTTCT+AGG | + | chr1.4:73912061-73912080 | MS.gene34041:CDS | 35.0% | |
| ! | AGTTGCTACTTGCTAGAATT+TGG | + | chr1.4:73912664-73912683 | MS.gene34041:intron | 35.0% |
| ! | GAGATCTTTGTGTTGGTATA+AGG | + | chr1.4:73911710-73911729 | MS.gene34041:CDS | 35.0% |
| ! | GCATTGGAAGTTGATTTATG+AGG | - | chr1.4:73912958-73912977 | None:intergenic | 35.0% |
| ! | TAGAAGACTTTTGTGTTGAG+TGG | - | chr1.4:73911178-73911197 | None:intergenic | 35.0% |
| ! | TCTTTTGCATCAAGCATACA+GGG | + | chr1.4:73913070-73913089 | MS.gene34041:intron | 35.0% |
| ! | TGAATCTAAGCACTTTTCAG+AGG | - | chr1.4:73911113-73911132 | None:intergenic | 35.0% |
| ! | TTCTTTTGCATCAAGCATAC+AGG | + | chr1.4:73913069-73913088 | MS.gene34041:intron | 35.0% |
| ! | TTGGTAACTTGTCATTGTCA+AGG | + | chr1.4:73913176-73913195 | MS.gene34041:intron | 35.0% |
| ! | TTTTCTGTTCCAACAAGATC+AGG | - | chr1.4:73913547-73913566 | None:intergenic | 35.0% |
| !! | AAGAGTAGTTCTGTTTCTGA+AGG | + | chr1.4:73913427-73913446 | MS.gene34041:CDS | 35.0% |
| !! | AGGATTCTTCTAGGATTAGT+TGG | + | chr1.4:73912070-73912089 | MS.gene34041:CDS | 35.0% |
| !! | ATTGATGGTGATGATGATGA+TGG | - | chr1.4:73912980-73912999 | None:intergenic | 35.0% |
| !! | CTTTTCAGAGGTTTTTTCCA+TGG | - | chr1.4:73911101-73911120 | None:intergenic | 35.0% |
| !! | GTGTTTTTGAGAGCAGAAAA+TGG | + | chr1.4:73911688-73911707 | MS.gene34041:CDS | 35.0% |
| !! | TGAGACTATTTTTCCTAGGT+TGG | + | chr1.4:73911501-73911520 | MS.gene34041:CDS | 35.0% |
| !! | TGTTGTAGTAGCTTGTTGAA+GGG | - | chr1.4:73913145-73913164 | None:intergenic | 35.0% |
| !! | TTGTTGTAGTAGCTTGTTGA+AGG | - | chr1.4:73913146-73913165 | None:intergenic | 35.0% |
| !!! | CAAAATGCCTTTTGAAACTG+AGG | + | chr1.4:73912050-73912069 | MS.gene34041:CDS | 35.0% |
| AACCGTGTATCACCTTTGTT+TGG | + | chr1.4:73911796-73911815 | MS.gene34041:CDS | 40.0% | |
| AACCTTGGTTTCTTTCTTGG+AGG | - | chr1.4:73912914-73912933 | None:intergenic | 40.0% | |
| AAGATATGCATGGACAGTGT+TGG | + | chr1.4:73911563-73911582 | MS.gene34041:CDS | 40.0% | |
| ACGTAGACTTCATCAGTTTC+AGG | - | chr1.4:73911310-73911329 | None:intergenic | 40.0% | |
| AGAGCAAAGAAAGGTGGAAT+TGG | + | chr1.4:73911733-73911752 | MS.gene34041:CDS | 40.0% | |
| ATAAGGAGAGCAAAGAAAGG+TGG | + | chr1.4:73911727-73911746 | MS.gene34041:CDS | 40.0% | |
| ATACTCTTGTAGGGTCCATA+AGG | - | chr1.4:73913232-73913251 | None:intergenic | 40.0% | |
| ATAGTCTCAGCACAGTATCT+AGG | - | chr1.4:73911490-73911509 | None:intergenic | 40.0% | |
| CAATCTGATGCAAACAATGG+TGG | + | chr1.4:73911451-73911470 | MS.gene34041:CDS | 40.0% | |
| CACCAAACAAAGGTGATACA+CGG | - | chr1.4:73911801-73911820 | None:intergenic | 40.0% | |
| CCAGTTGAGAATTCTTCTGA+TGG | + | chr1.4:73913487-73913506 | MS.gene34041:CDS | 40.0% | |
| CCATCAGAAGAATTCTCAAC+TGG | - | chr1.4:73913490-73913509 | None:intergenic | 40.0% | |
| CGTAGACTTCATCAGTTTCA+GGG | - | chr1.4:73911309-73911328 | None:intergenic | 40.0% | |
| GGTATAAGGAGAGCAAAGAA+AGG | + | chr1.4:73911724-73911743 | MS.gene34041:CDS | 40.0% | |
| GTTGAGAATTCTTCTGATGG+AGG | + | chr1.4:73913490-73913509 | MS.gene34041:CDS | 40.0% | |
| GTTGTCAAAAGATGTCTCCT+TGG | - | chr1.4:73911616-73911635 | None:intergenic | 40.0% | |
| GTTTGTGGTTATGGATTCCA+TGG | + | chr1.4:73911081-73911100 | MS.gene34041:CDS | 40.0% | |
| TCTGCTGAATAATCCAACCT+AGG | - | chr1.4:73911517-73911536 | None:intergenic | 40.0% | |
| TTGTTGAGTGTGGGAAATTC+TGG | + | chr1.4:73913295-73913314 | MS.gene34041:intron | 40.0% | |
| ! | AAGACTTTTGTGTTGAGTGG+TGG | - | chr1.4:73911175-73911194 | None:intergenic | 40.0% |
| ! | AGGAGACATCTTTTGACAAC+TGG | + | chr1.4:73911616-73911635 | MS.gene34041:CDS | 40.0% |
| ! | GACATCTTTTGACAACTGGT+TGG | + | chr1.4:73911620-73911639 | MS.gene34041:CDS | 40.0% |
| ! | GCTGTAAACTGTGCTGTTAA+TGG | + | chr1.4:73911916-73911935 | MS.gene34041:CDS | 40.0% |
| ! | GGGTGCTTTTGCTTCAATAT+TGG | - | chr1.4:73913338-73913357 | None:intergenic | 40.0% |
| ! | TCATGTTTTCCAGGTAGTGT+GGG | + | chr1.4:73912793-73912812 | MS.gene34041:intron | 40.0% |
| ! | TTCTTTCTTGGAGGTGTGAA+TGG | - | chr1.4:73912905-73912924 | None:intergenic | 40.0% |
| ! | TTGTCTTGCTTGTTGAGTGT+GGG | + | chr1.4:73913286-73913305 | MS.gene34041:intron | 40.0% |
| !! | AATCACAAGAAGCTTGTTGC+TGG | + | chr1.4:73911655-73911674 | MS.gene34041:CDS | 40.0% |
| !! | AATTCAGGAGTACTAGCTCT+TGG | - | chr1.4:73911967-73911986 | None:intergenic | 40.0% |
| !! | GTGCTGAGACTATTTTTCCT+AGG | + | chr1.4:73911497-73911516 | MS.gene34041:CDS | 40.0% |
| AAGAAAGGTGGAATTGGTGG+TGG | + | chr1.4:73911739-73911758 | MS.gene34041:CDS | 45.0% | |
| ATTCTACAAGGGATGAGAGG+TGG | - | chr1.4:73911262-73911281 | None:intergenic | 45.0% | |
| CAACACAAGCCTGATCTTGT+TGG | + | chr1.4:73913535-73913554 | MS.gene34041:CDS | 45.0% | |
| CACCTCCAAGAAAGAAACCA+AGG | + | chr1.4:73912909-73912928 | MS.gene34041:intron | 45.0% | |
| CCATAAGGAGGCCTAGTTAT+AGG | - | chr1.4:73913217-73913236 | None:intergenic | 45.0% | |
| CCTATAACTAGGCCTCCTTA+TGG | + | chr1.4:73913214-73913233 | MS.gene34041:intron | 45.0% | |
| GAGATTCTACAAGGGATGAG+AGG | - | chr1.4:73911265-73911284 | None:intergenic | 45.0% | |
| GCAAAGAAAGGTGGAATTGG+TGG | + | chr1.4:73911736-73911755 | MS.gene34041:CDS | 45.0% | |
| TCTGATGCAAACAATGGTGG+TGG | + | chr1.4:73911454-73911473 | MS.gene34041:CDS | 45.0% | |
| ! | CGTGTATCACCTTTGTTTGG+TGG | + | chr1.4:73911799-73911818 | MS.gene34041:CDS | 45.0% |
| ! | CTTGTCTTGCTTGTTGAGTG+TGG | + | chr1.4:73913285-73913304 | MS.gene34041:intron | 45.0% |
| ! | GTATCACCTTTGTTTGGTGG+TGG | + | chr1.4:73911802-73911821 | MS.gene34041:CDS | 45.0% |
| ! | GTCATGTTTTCCAGGTAGTG+TGG | + | chr1.4:73912792-73912811 | MS.gene34041:intron | 45.0% |
| !! | GGTGATGATGATGATGGCAT+TGG | - | chr1.4:73912974-73912993 | None:intergenic | 45.0% |
| !! | GGTTGTTCTGGTTTCTTGTG+TGG | + | chr1.4:73911826-73911845 | MS.gene34041:CDS | 45.0% |
| AAGGGATGAGAGGTGGAACA+CGG | - | chr1.4:73911255-73911274 | None:intergenic | 50.0% | |
| CAACCACCACCACCAAACAA+AGG | - | chr1.4:73911811-73911830 | None:intergenic | 50.0% | |
| CTCTTGTAGGGTCCATAAGG+AGG | - | chr1.4:73913229-73913248 | None:intergenic | 50.0% | |
| GAGTGGTGGCATTTGAACCA+TGG | - | chr1.4:73911161-73911180 | None:intergenic | 50.0% | |
| GCATGTTCTGCATGACCTTG+TGG | - | chr1.4:73911205-73911224 | None:intergenic | 50.0% | |
| GGAGAATCAGGCCAACGAAT+TGG | - | chr1.4:73912132-73912151 | None:intergenic | 50.0% | |
| TGGAGGCTCTCCTTGGTATA+AGG | + | chr1.4:73913507-73913526 | MS.gene34041:CDS | 50.0% | |
| TGGTCCAAATTGAGCATGCC+TGG | - | chr1.4:73913098-73913117 | None:intergenic | 50.0% | |
| ! | TTCGTTGGCCTGATTCTCCT+TGG | + | chr1.4:73912133-73912152 | MS.gene34041:CDS | 50.0% |
| !! | TCACCTTTGTTTGGTGGTGG+TGG | + | chr1.4:73911805-73911824 | MS.gene34041:CDS | 50.0% |
| !! | TTTGGTGGTGGTGGTTGTTC+TGG | + | chr1.4:73911814-73911833 | MS.gene34041:CDS | 50.0% |
| AGGGATGAGAGGTGGAACAC+GGG | - | chr1.4:73911254-73911273 | None:intergenic | 55.0% | |
| CAACTATGGCACGCATGTGC+TGG | + | chr1.4:73911133-73911152 | MS.gene34041:CDS | 55.0% | |
| CATCAAGCATACAGGGAGCC+AGG | + | chr1.4:73913077-73913096 | MS.gene34041:intron | 55.0% | |
| CTGGTTCATCCCACACTACC+TGG | - | chr1.4:73912805-73912824 | None:intergenic | 55.0% | |
| CTTCTGATGGAGGCTCTCCT+TGG | + | chr1.4:73913500-73913519 | MS.gene34041:CDS | 55.0% | |
| GGAGCCAGGCATGCTCAATT+TGG | + | chr1.4:73913091-73913110 | MS.gene34041:intron | 55.0% | |
| TTCTCCTTGGCGCCTTCTTC+AGG | + | chr1.4:73912146-73912165 | MS.gene34041:CDS | 55.0% | |
| ! | GAGAGGTGGAACACGGGTTT+TGG | - | chr1.4:73911248-73911267 | None:intergenic | 55.0% |
| !! | AGAAGGCGCCAAGGAGAATC+AGG | - | chr1.4:73912144-73912163 | None:intergenic | 55.0% |
| !! | GTTACCTGAAGAAGGCGCCA+AGG | - | chr1.4:73912153-73912172 | None:intergenic | 55.0% |
| ! | GCACGCATGTGCTGGTGCCA+TGG | + | chr1.4:73911141-73911160 | MS.gene34041:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 73911079 | 73913594 | 73911079 | ID=MS.gene34041 |
| chr1.4 | mRNA | 73911079 | 73913594 | 73911079 | ID=MS.gene34041.t1;Parent=MS.gene34041 |
| chr1.4 | exon | 73911079 | 73912167 | 73911079 | ID=MS.gene34041.t1.exon1;Parent=MS.gene34041.t1 |
| chr1.4 | CDS | 73911079 | 73912167 | 73911079 | ID=cds.MS.gene34041.t1;Parent=MS.gene34041.t1 |
| chr1.4 | exon | 73912806 | 73912858 | 73912806 | ID=MS.gene34041.t1.exon2;Parent=MS.gene34041.t1 |
| chr1.4 | CDS | 73912806 | 73912858 | 73912806 | ID=cds.MS.gene34041.t1;Parent=MS.gene34041.t1 |
| chr1.4 | exon | 73913414 | 73913594 | 73913414 | ID=MS.gene34041.t1.exon3;Parent=MS.gene34041.t1 |
| chr1.4 | CDS | 73913414 | 73913594 | 73913414 | ID=cds.MS.gene34041.t1;Parent=MS.gene34041.t1 |
| Gene Sequence |
| Protein sequence |