Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34142.t1 | XP_003592255.1 | 88.5 | 687 | 57 | 3 | 1 | 665 | 1 | 687 | 0.00E+00 | 1143.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34142.t1 | G7IES3 | 88.5 | 687 | 57 | 3 | 1 | 665 | 1 | 687 | 0.0e+00 | 1143.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene34142.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34142.t1 | MTR_1g100810 | 91.121 | 687 | 39 | 3 | 1 | 665 | 1 | 687 | 0.0 | 1285 |
MS.gene34142.t1 | MTR_6g053660 | 47.701 | 696 | 277 | 14 | 1 | 643 | 1 | 662 | 0.0 | 544 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34142.t1 | AT4G25610 | 41.478 | 663 | 282 | 20 | 18 | 660 | 6 | 582 | 8.72e-142 | 426 |
MS.gene34142.t1 | AT4G25610 | 41.478 | 663 | 282 | 20 | 18 | 660 | 6 | 582 | 8.72e-142 | 426 |
MS.gene34142.t1 | AT4G25610 | 43.659 | 552 | 237 | 16 | 18 | 558 | 6 | 494 | 2.61e-125 | 383 |
Find 151 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTGGTTCTTTGTGCAATT+TGG | 0.077562 | 1.2:+75110492 | None:intergenic |
GTCTTCCGGTTTCATAAAAT+TGG | 0.103009 | 1.2:+75114882 | None:intergenic |
AAAACCACTGTATCAATTTC+TGG | 0.125076 | 1.2:+75110520 | None:intergenic |
CAATTTCTGGTTTAAGTTTC+CGG | 0.156443 | 1.2:+75110533 | None:intergenic |
CGAGAATATTGAACAACTTT+TGG | 0.177844 | 1.2:+75112906 | None:intergenic |
CCTTTCTCAGGCCTCATTCT+AGG | 0.189935 | 1.2:+75109809 | None:intergenic |
TGTCGGTGCAAAGTAATTTA+AGG | 0.194876 | 1.2:-75110180 | MS.gene34142:CDS |
TTTATGCCTTCTGTAATTAA+TGG | 0.195529 | 1.2:+75114370 | None:intergenic |
CTGGTTCCATTTCCATATTT+TGG | 0.202534 | 1.2:+75110580 | None:intergenic |
GAACAACTTCGTAGAGAATT+TGG | 0.232636 | 1.2:-75110377 | MS.gene34142:CDS |
CAGGGCTGGTTTCTCCCTTT+TGG | 0.236355 | 1.2:-75113071 | MS.gene34142:intron |
CCTCCTCCACCAGCAGCTTC+TGG | 0.246352 | 1.2:+75111659 | None:intergenic |
TCTGGTTCTTTGTGCAATTT+GGG | 0.246471 | 1.2:+75110493 | None:intergenic |
AAGCCTTCTGAATCTGCTTT+TGG | 0.247089 | 1.2:+75110103 | None:intergenic |
GCTTCTCCTGACCAATATTC+TGG | 0.255812 | 1.2:+75110350 | None:intergenic |
TGAAAGGAGTCAGGTTTAAT+TGG | 0.262890 | 1.2:+75110328 | None:intergenic |
TCTGGAGTCATTCCAAAATA+TGG | 0.277515 | 1.2:-75110592 | MS.gene34142:CDS |
GAAAATGGCATAGAAGTTAA+AGG | 0.285683 | 1.2:-75110961 | MS.gene34142:CDS |
CTCAGGCCTCATTCTAGGTT+TGG | 0.291161 | 1.2:+75109814 | None:intergenic |
AACCCATGAGTTTCTGAATC+AGG | 0.303082 | 1.2:+75109875 | None:intergenic |
TTTAGTAGTTGAACCTTTGC+AGG | 0.320130 | 1.2:+75114431 | None:intergenic |
TCTACACCTTCATTGGTGTC+TGG | 0.327670 | 1.2:+75110850 | None:intergenic |
TTATGCCTTCTGTAATTAAT+GGG | 0.334508 | 1.2:+75114371 | None:intergenic |
GATGGATGCAATATGGGTTA+TGG | 0.340588 | 1.2:-75110145 | MS.gene34142:CDS |
TTACAGACAAGCTGAGGCTT+TGG | 0.343221 | 1.2:-75111040 | MS.gene34142:intron |
TGATATAGATGGATGCAATA+TGG | 0.344001 | 1.2:-75110152 | MS.gene34142:CDS |
ATTAAACCTGACTCCTTTCA+TGG | 0.345827 | 1.2:-75110325 | MS.gene34142:CDS |
GATGGAGAGGTTGGAAAGAT+TGG | 0.345939 | 1.2:-75112821 | MS.gene34142:CDS |
GCGAGGGACCAACATGAAAA+TGG | 0.348958 | 1.2:-75110976 | MS.gene34142:CDS |
TTCCTTTCCTTTCCTAGGGC+TGG | 0.354526 | 1.2:-75114808 | MS.gene34142:CDS |
TCGTGAGTCTTAACTTCATC+TGG | 0.355533 | 1.2:+75110475 | None:intergenic |
CTTCTGGCATTTCAATGCTT+CGG | 0.356524 | 1.2:+75111675 | None:intergenic |
AATTTGGCAAACCAGAATAT+TGG | 0.361607 | 1.2:-75110361 | MS.gene34142:CDS |
AAGCAGATTCAGAAGGCTTT+CGG | 0.365566 | 1.2:-75110099 | MS.gene34142:CDS |
GGAAGACGGAAATGATTCTT+TGG | 0.374474 | 1.2:-75114866 | MS.gene34142:CDS |
ATCAGTCAGGAGTTAAGCTT+TGG | 0.382056 | 1.2:-75110294 | MS.gene34142:CDS |
ATCGCCAGAGGAACCATCTT+TGG | 0.386656 | 1.2:-75110911 | MS.gene34142:CDS |
TTCCTAGGGCTGGTGGTGAC+AGG | 0.386737 | 1.2:-75114798 | MS.gene34142:CDS |
AATGCTTTCCAGGAGGTTCC+AGG | 0.387639 | 1.2:-75113166 | MS.gene34142:intron |
AAACTTACTTTGTGCAAGAA+AGG | 0.392052 | 1.2:+75110054 | None:intergenic |
GTCATTCCAAAATATGGAAA+TGG | 0.395627 | 1.2:-75110586 | MS.gene34142:CDS |
ATGGATGCAATATGGGTTAT+GGG | 0.398336 | 1.2:-75110144 | MS.gene34142:CDS |
ATGGAGAGGTTGGAAAGATT+GGG | 0.398470 | 1.2:-75112820 | MS.gene34142:CDS |
TTTATCTTGATTCCTTTCTC+AGG | 0.400060 | 1.2:+75109797 | None:intergenic |
AACTCTCAAAAGTCTAAGTC+TGG | 0.401073 | 1.2:-75110610 | MS.gene34142:CDS |
GCATCTGATTGTAATGTTTG+TGG | 0.403957 | 1.2:+75110778 | None:intergenic |
ATTCATTTGGCAGAAATTCC+AGG | 0.405266 | 1.2:-75114470 | MS.gene34142:intron |
AAAGAATCATTTCCGTCTTC+CGG | 0.410730 | 1.2:+75114868 | None:intergenic |
TGAACAAAACTCTCTGTCTT+TGG | 0.421485 | 1.2:+75114394 | None:intergenic |
TTAAGGTTGTGTGATATAGA+TGG | 0.422601 | 1.2:-75110163 | MS.gene34142:CDS |
GTTATGATTGTGACACTAAT+CGG | 0.424357 | 1.2:-75110747 | MS.gene34142:CDS |
TTTAGGGGCATATTGGGATA+AGG | 0.425758 | 1.2:-75114150 | MS.gene34142:intron |
ACAATAGTACGTTGCGACTT+AGG | 0.426679 | 1.2:+75110655 | None:intergenic |
GCCGTGATAGTGGTAAAGTT+TGG | 0.430539 | 1.2:-75110558 | MS.gene34142:CDS |
CTTAGGATGCCTTAGCCGTC+TGG | 0.433778 | 1.2:+75110672 | None:intergenic |
TGACAAGATTATTCTCTGAT+TGG | 0.442959 | 1.2:+75110410 | None:intergenic |
AACCATTCCTTTCCTTTCCT+AGG | 0.443817 | 1.2:-75114813 | MS.gene34142:CDS |
TTAGTTTCATGCTGGCTCAC+TGG | 0.444350 | 1.2:+75110268 | None:intergenic |
CATGTTGCACAATCCTTGAC+TGG | 0.452474 | 1.2:+75109848 | None:intergenic |
TCTTCCGGTTTCATAAAATT+GGG | 0.452669 | 1.2:+75114883 | None:intergenic |
ATCCTCATCTACACCTTCAT+TGG | 0.453113 | 1.2:+75110843 | None:intergenic |
TTGCCTCCATGAAAGGAGTC+AGG | 0.453534 | 1.2:+75110319 | None:intergenic |
CCAGAAGCTGCTGGTGGAGG+AGG | 0.458809 | 1.2:-75111659 | MS.gene34142:CDS |
GAAGCTGCTGGTGGAGGAGG+AGG | 0.460524 | 1.2:-75111656 | MS.gene34142:CDS |
TTTCTTGCTAGAGCAGAGAT+TGG | 0.464341 | 1.2:-75112765 | MS.gene34142:intron |
CCACAGTATTATCTCAGGGC+TGG | 0.465461 | 1.2:-75113085 | MS.gene34142:CDS |
GTCTCAACACTTTGAAGTGG+TGG | 0.466490 | 1.2:+75110241 | None:intergenic |
TGCAGGATATTGTTCAATCC+AGG | 0.467022 | 1.2:-75112952 | MS.gene34142:intron |
AAAATGGCATAGAAGTTAAA+GGG | 0.467666 | 1.2:-75110960 | MS.gene34142:CDS |
GCCTCTGTTCTCTCCTGCAA+AGG | 0.470371 | 1.2:-75114444 | MS.gene34142:CDS |
TATAGGAAAACTAGAAGGCC+TGG | 0.471838 | 1.2:+75112934 | None:intergenic |
AGCAATATTTCTTACCAAAA+GGG | 0.473884 | 1.2:+75113057 | None:intergenic |
ACCATTCCTTTCCTTTCCTA+GGG | 0.476231 | 1.2:-75114812 | MS.gene34142:CDS |
GATATAGATGGATGCAATAT+GGG | 0.480010 | 1.2:-75110151 | MS.gene34142:CDS |
GTCATTTGAGAATGTGATGT+TGG | 0.480349 | 1.2:-75113811 | MS.gene34142:CDS |
GGCAAACCAGAATATTGGTC+AGG | 0.480574 | 1.2:-75110356 | MS.gene34142:CDS |
CAATGGCTGCCAGACGGCTA+AGG | 0.481003 | 1.2:-75110681 | MS.gene34142:CDS |
CTACACCTTCATTGGTGTCT+GGG | 0.483294 | 1.2:+75110851 | None:intergenic |
TCGCAACGTACTATTGTCAA+TGG | 0.487852 | 1.2:-75110649 | MS.gene34142:CDS |
GCTTAGGCTTAAAGAACAAA+AGG | 0.490968 | 1.2:-75110998 | MS.gene34142:CDS |
CTTTCCTTTCCTAGGGCTGG+TGG | 0.493616 | 1.2:-75114805 | MS.gene34142:CDS |
AAATTTGATCATAATTTCCA+TGG | 0.493661 | 1.2:+75110203 | None:intergenic |
GAGGCAGTAAGTTTCGCAAC+TGG | 0.495063 | 1.2:+75114913 | None:intergenic |
AACTTTACCACTATCACGGC+TGG | 0.497031 | 1.2:+75110561 | None:intergenic |
GCAGCCAAAGATGGTTCCTC+TGG | 0.504545 | 1.2:+75110907 | None:intergenic |
GTAGGACTCTAAGATAAGTA+AGG | 0.507800 | 1.2:-75114177 | MS.gene34142:intron |
AGGAGGAAGCTGCTCAAAGA+AGG | 0.509595 | 1.2:-75111639 | MS.gene34142:intron |
CACCTGATTCAGAAACTCAT+GGG | 0.512560 | 1.2:-75109877 | MS.gene34142:CDS |
CCTAGAATGAGGCCTGAGAA+AGG | 0.517114 | 1.2:-75109809 | MS.gene34142:CDS |
TCACCTGATTCAGAAACTCA+TGG | 0.517154 | 1.2:-75109878 | MS.gene34142:CDS |
CAGTCAAGGATTGTGCAACA+TGG | 0.521844 | 1.2:-75109847 | MS.gene34142:CDS |
AATGGAACCAGCCGTGATAG+TGG | 0.523832 | 1.2:-75110568 | MS.gene34142:CDS |
ATGGGAACAAATCTCACGTC+GGG | 0.524173 | 1.2:-75110126 | MS.gene34142:CDS |
CATGGAGGCAACAATCAGTC+AGG | 0.524598 | 1.2:-75110307 | MS.gene34142:CDS |
AGAAACTTGTGCAAGCAACT+AGG | 0.527314 | 1.2:+75112783 | None:intergenic |
AAGTCACATGCAGCCAAAGA+TGG | 0.527424 | 1.2:+75110898 | None:intergenic |
AGCAATTTCGTCACATCATG+TGG | 0.528470 | 1.2:-75109912 | MS.gene34142:CDS |
GAAGATATAGGAAAACTAGA+AGG | 0.531281 | 1.2:+75112929 | None:intergenic |
GTTCACCCATTAATTACAGA+AGG | 0.542398 | 1.2:-75114376 | MS.gene34142:CDS |
CTGATTGTTGCCTCCATGAA+AGG | 0.543496 | 1.2:+75110312 | None:intergenic |
TGTGTAGCTCTCTGTAGAAG+AGG | 0.554214 | 1.2:-75113847 | MS.gene34142:intron |
TTCATTTGGCAGAAATTCCA+GGG | 0.554733 | 1.2:-75114469 | MS.gene34142:intron |
ACAGAAGTTGACGTAGTCCA+TGG | 0.555082 | 1.2:-75110220 | MS.gene34142:CDS |
GTTGCGAAACTTACTGCCTC+AGG | 0.558391 | 1.2:-75114910 | MS.gene34142:CDS |
ATGCCAGAAGCTGCTGGTGG+AGG | 0.559726 | 1.2:-75111662 | MS.gene34142:CDS |
GCTCTCTGTAGAAGAGGCAA+AGG | 0.564425 | 1.2:-75113841 | MS.gene34142:CDS |
CATTGCCCAGACACCAATGA+AGG | 0.565931 | 1.2:-75110856 | MS.gene34142:CDS |
TTACAATCAGATGCACAGTC+AGG | 0.570742 | 1.2:-75110769 | MS.gene34142:CDS |
GGAGAGAACAGAGGCCACCC+TGG | 0.571933 | 1.2:+75114452 | None:intergenic |
AATAATTGAATCCACTGTGC+TGG | 0.572644 | 1.2:+75114775 | None:intergenic |
CATAAAATTGGGAGTACCTG+AGG | 0.573819 | 1.2:+75114894 | None:intergenic |
GGCATAAACGTGTACACCAT+CGG | 0.580800 | 1.2:-75114355 | MS.gene34142:CDS |
GGCCTGTCACCACCAGCCCT+AGG | 0.584313 | 1.2:+75114796 | None:intergenic |
ATGCTTTCCAGGAGGTTCCA+GGG | 0.584824 | 1.2:-75113165 | MS.gene34142:intron |
TCTGTCTCAACACTTTGAAG+TGG | 0.585570 | 1.2:+75110238 | None:intergenic |
TAAACCAGAAATTGATACAG+TGG | 0.585974 | 1.2:-75110524 | MS.gene34142:CDS |
CTAAATCCAAACCTAGAATG+AGG | 0.586238 | 1.2:-75109820 | MS.gene34142:CDS |
ATTGAAATGCCAGAAGCTGC+TGG | 0.594331 | 1.2:-75111668 | MS.gene34142:CDS |
AGTCAAGGATTGTGCAACAT+GGG | 0.596691 | 1.2:-75109846 | MS.gene34142:CDS |
TCATGGGTTCAAACCAGTCA+AGG | 0.600323 | 1.2:-75109861 | MS.gene34142:CDS |
CACCAATGAAGGTGTAGATG+AGG | 0.600811 | 1.2:-75110845 | MS.gene34142:CDS |
TCAACTCTTCGAACACAACA+AGG | 0.602015 | 1.2:-75113121 | MS.gene34142:CDS |
ATAGTGGTAAAGTTTGGAGC+CGG | 0.606698 | 1.2:-75110552 | MS.gene34142:CDS |
GGCTTAAAGAACAAAAGGCG+AGG | 0.606871 | 1.2:-75110993 | MS.gene34142:CDS |
TCCAAACTTTACCACTATCA+CGG | 0.608024 | 1.2:+75110557 | None:intergenic |
ATTTATTTACAGACAAGCTG+AGG | 0.611059 | 1.2:-75111046 | MS.gene34142:intron |
GCCCTAGGAAAGGAAAGGAA+TGG | 0.614272 | 1.2:+75114811 | None:intergenic |
GTCACCACCAGCCCTAGGAA+AGG | 0.616240 | 1.2:+75114801 | None:intergenic |
GGATACATTGATAAGACAAG+CGG | 0.623294 | 1.2:-75114845 | MS.gene34142:CDS |
CACCAGCCCTAGGAAAGGAA+AGG | 0.626418 | 1.2:+75114806 | None:intergenic |
ATTTGAGAATGTGATGTTGG+AGG | 0.627772 | 1.2:-75113808 | MS.gene34142:intron |
ACATAATCCTCGACGCACAA+TGG | 0.630261 | 1.2:-75110698 | MS.gene34142:CDS |
CATGCTTTAGAACAGCAACA+AGG | 0.632194 | 1.2:-75114751 | MS.gene34142:intron |
AAAGGGTGCATCAGAAACAC+AGG | 0.634148 | 1.2:-75110943 | MS.gene34142:CDS |
GCTTAAAGAACAAAAGGCGA+GGG | 0.639528 | 1.2:-75110992 | MS.gene34142:CDS |
ACATTGATAAGACAAGCGGT+TGG | 0.640269 | 1.2:-75114841 | MS.gene34142:CDS |
CTGGCAGCCATTGTGCGTCG+AGG | 0.644078 | 1.2:+75110691 | None:intergenic |
CTTTCACATAGGTAAAGGCG+TGG | 0.647669 | 1.2:-75111714 | MS.gene34142:intron |
GACGCACAATGGCTGCCAGA+CGG | 0.648130 | 1.2:-75110687 | MS.gene34142:CDS |
GGGCCAAAAGCAGATTCAGA+AGG | 0.649820 | 1.2:-75110106 | MS.gene34142:CDS |
GCTTGTACAATTGAAGACCC+TGG | 0.657586 | 1.2:+75113148 | None:intergenic |
GTGCATCAGAAACACAGGAG+AGG | 0.672991 | 1.2:-75110938 | MS.gene34142:CDS |
GTGGTGACAGGCCAGCACAG+TGG | 0.685473 | 1.2:-75114786 | MS.gene34142:CDS |
TATGGGAACAAATCTCACGT+CGG | 0.688700 | 1.2:-75110127 | MS.gene34142:CDS |
GAAATGCCAGAAGCTGCTGG+TGG | 0.694123 | 1.2:-75111665 | MS.gene34142:CDS |
AAACCTGACTCCTTTCATGG+AGG | 0.702374 | 1.2:-75110322 | MS.gene34142:CDS |
ACCTTTGCAGGAGAGAACAG+AGG | 0.703630 | 1.2:+75114443 | None:intergenic |
AGGAGAGGAGATATCGCCAG+AGG | 0.716215 | 1.2:-75110923 | MS.gene34142:CDS |
ATTTGGCAGAAATTCCAGGG+TGG | 0.736950 | 1.2:-75114466 | MS.gene34142:intron |
CCAGCCCTGAGATAATACTG+TGG | 0.746348 | 1.2:+75113085 | None:intergenic |
TTGTGACACTGATCAGAACG+TGG | 0.764373 | 1.2:-75110803 | MS.gene34142:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAATATATTTAGATTAATT+AGG | + | chr1.2:75111474-75111493 | None:intergenic | 10.0% |
!! | CAATATATTTAGATTAATTA+GGG | + | chr1.2:75111473-75111492 | None:intergenic | 10.0% |
!!! | AATGATTTTAGTTTTAATTA+AGG | + | chr1.2:75110048-75110067 | None:intergenic | 10.0% |
!!! | ATTATATCAGAAAAAATTTT+GGG | + | chr1.2:75110187-75110206 | None:intergenic | 10.0% |
!!! | TATTATATCAGAAAAAATTT+TGG | + | chr1.2:75110188-75110207 | None:intergenic | 10.0% |
!! | AAAATATTTCAAGAGTTAAT+TGG | - | chr1.2:75113136-75113155 | MS.gene34142:CDS | 15.0% |
!! | AAATATTTCAAGAGTTAATT+GGG | - | chr1.2:75113137-75113156 | MS.gene34142:CDS | 15.0% |
!! | AACAAAATACGATTAAATAT+GGG | + | chr1.2:75112572-75112591 | None:intergenic | 15.0% |
!! | AATAATATAGAATAGAAATC+TGG | + | chr1.2:75112428-75112447 | None:intergenic | 15.0% |
!! | AGATTTCTATTCTATATTAT+TGG | - | chr1.2:75112427-75112446 | MS.gene34142:intron | 15.0% |
!! | GAAAATTGATATGTATAAAT+TGG | + | chr1.2:75114656-75114675 | None:intergenic | 15.0% |
!! | GAATAATATTTCAATATCTA+AGG | - | chr1.2:75112721-75112740 | MS.gene34142:intron | 15.0% |
!! | GATATAATATTTGATTCATT+TGG | - | chr1.2:75110199-75110218 | MS.gene34142:CDS | 15.0% |
!! | TTTAAATAATTGTCATGAAA+AGG | - | chr1.2:75112593-75112612 | MS.gene34142:intron | 15.0% |
!!! | AAATTATGATCAAATTTTGT+CGG | - | chr1.2:75114485-75114504 | MS.gene34142:intron | 15.0% |
!!! | AATTTTTAATAGGTGAAATA+AGG | - | chr1.2:75113323-75113342 | MS.gene34142:intron | 15.0% |
!!! | ACTTTCTTGTAATTTTTAAT+AGG | - | chr1.2:75113313-75113332 | MS.gene34142:intron | 15.0% |
!!! | ATTGCAATAATAAGAAATTT+TGG | - | chr1.2:75109955-75109974 | MS.gene34142:intron | 15.0% |
!!! | ATTTTAGTTTTAATTAAGGA+AGG | + | chr1.2:75110044-75110063 | None:intergenic | 15.0% |
!!! | ATTTTTAATAGGTGAAATAA+GGG | - | chr1.2:75113324-75113343 | MS.gene34142:intron | 15.0% |
!! | AAATAAGATGTATTCTTCAT+AGG | + | chr1.2:75110778-75110797 | None:intergenic | 20.0% |
!! | AAATCATATTCACATTGAAA+AGG | + | chr1.2:75111211-75111230 | None:intergenic | 20.0% |
!! | AAATTTGATCATAATTTCCA+TGG | + | chr1.2:75114482-75114501 | None:intergenic | 20.0% |
!! | ACAAAATACGATTAAATATG+GGG | + | chr1.2:75112571-75112590 | None:intergenic | 20.0% |
!! | ATTATTGGCATAATAGTATT+AGG | - | chr1.2:75112442-75112461 | MS.gene34142:intron | 20.0% |
!! | GAACAAAATACGATTAAATA+TGG | + | chr1.2:75112573-75112592 | None:intergenic | 20.0% |
!! | TAATGCTTCTTATATATTGT+AGG | - | chr1.2:75110487-75110506 | MS.gene34142:CDS | 20.0% |
!! | TTATTAGCATAAATGAAAGT+GGG | - | chr1.2:75110996-75111015 | MS.gene34142:CDS | 20.0% |
!! | TTTATTAGCATAAATGAAAG+TGG | - | chr1.2:75110995-75111014 | MS.gene34142:CDS | 20.0% |
!!! | AATTGAAAGTTTTTCAAAGA+CGG | - | chr1.2:75111365-75111384 | MS.gene34142:intron | 20.0% |
!!! | ACATAAAAATGTATTTTCAC+TGG | + | chr1.2:75111808-75111827 | None:intergenic | 20.0% |
!!! | AGTGAAAATACATTTTTATG+TGG | - | chr1.2:75111807-75111826 | MS.gene34142:intron | 20.0% |
!!! | CAATTTTACATATATGAAGA+AGG | - | chr1.2:75110572-75110591 | MS.gene34142:CDS | 20.0% |
!!! | CTTTATTTTTTTTCAAACCT+CGG | - | chr1.2:75112278-75112297 | MS.gene34142:intron | 20.0% |
!!! | GTGTATAATTTGTTATTCTA+TGG | - | chr1.2:75112169-75112188 | MS.gene34142:intron | 20.0% |
!!! | TACAATATATAAGAAGCATT+AGG | + | chr1.2:75110488-75110507 | None:intergenic | 20.0% |
!!! | TATATATCTACATTTTTTGC+AGG | - | chr1.2:75111713-75111732 | MS.gene34142:intron | 20.0% |
! | AAAACAATAAGAGCTGAAAA+GGG | + | chr1.2:75111434-75111453 | None:intergenic | 25.0% |
! | AAAAGTGAGTATGTGAAAAA+GGG | + | chr1.2:75111065-75111084 | None:intergenic | 25.0% |
! | AAAATGGCATAGAAGTTAAA+GGG | - | chr1.2:75113722-75113741 | MS.gene34142:intron | 25.0% |
! | AAGTAAACATGAAAATACAC+TGG | + | chr1.2:75110440-75110459 | None:intergenic | 25.0% |
! | AGCAATATTTCTTACCAAAA+GGG | + | chr1.2:75111628-75111647 | None:intergenic | 25.0% |
! | ATATAATAACAAAACCAGTG+TGG | - | chr1.2:75113352-75113371 | MS.gene34142:intron | 25.0% |
! | ATATTGTTAACCAACAGTAT+CGG | - | chr1.2:75112146-75112165 | MS.gene34142:intron | 25.0% |
! | ATTGTTAACAGATGGAAAAA+TGG | + | chr1.2:75113203-75113222 | None:intergenic | 25.0% |
! | CAAAATACGATTAAATATGG+GGG | + | chr1.2:75112570-75112589 | None:intergenic | 25.0% |
! | CTTGTCTGTAAATAAATGAA+GGG | + | chr1.2:75113633-75113652 | None:intergenic | 25.0% |
! | TAAAAGTGAGTATGTGAAAA+AGG | + | chr1.2:75111066-75111085 | None:intergenic | 25.0% |
! | TAATGTTTGAATATGAACAG+AGG | + | chr1.2:75112902-75112921 | None:intergenic | 25.0% |
! | TATATTATTTCCAGACAAGA+AGG | + | chr1.2:75111251-75111270 | None:intergenic | 25.0% |
! | TATTAGCATAAATGAAAGTG+GGG | - | chr1.2:75110997-75111016 | MS.gene34142:CDS | 25.0% |
! | TATTGTTAGCTATGTACAAA+GGG | - | chr1.2:75112394-75112413 | MS.gene34142:intron | 25.0% |
! | TGTTTGAATTGAACATTTCT+CGG | - | chr1.2:75109989-75110008 | MS.gene34142:intron | 25.0% |
! | TTATGCCTTCTGTAATTAAT+GGG | + | chr1.2:75110314-75110333 | None:intergenic | 25.0% |
! | TTTAATCTTTCAACAAACAG+AGG | + | chr1.2:75111184-75111203 | None:intergenic | 25.0% |
! | TTTATGCCTTCTGTAATTAA+TGG | + | chr1.2:75110315-75110334 | None:intergenic | 25.0% |
!! | AAGATAAGTAAGGATCTTTT+AGG | - | chr1.2:75110515-75110534 | MS.gene34142:CDS | 25.0% |
!! | AGATAAGTAAGGATCTTTTA+GGG | - | chr1.2:75110516-75110535 | MS.gene34142:CDS | 25.0% |
!! | CTTTATATCTCATAAGTTGA+AGG | - | chr1.2:75110373-75110392 | MS.gene34142:CDS | 25.0% |
!! | GAGAATATTGAACAACTTTT+GGG | + | chr1.2:75111778-75111797 | None:intergenic | 25.0% |
!! | TCTGTTTGTTGAAAGATTAA+AGG | - | chr1.2:75111183-75111202 | MS.gene34142:intron | 25.0% |
!! | TTTTGCTGCATATATTCTTT+AGG | - | chr1.2:75111677-75111696 | MS.gene34142:CDS | 25.0% |
!!! | ATCAGAAAAAATTTTGGGTT+TGG | + | chr1.2:75110182-75110201 | None:intergenic | 25.0% |
!!! | ATTGAAAGTTTTTCAAAGAC+GGG | - | chr1.2:75111366-75111385 | MS.gene34142:intron | 25.0% |
!!! | TGACACTGATTTTATTGTTT+GGG | - | chr1.2:75112233-75112252 | MS.gene34142:intron | 25.0% |
!!! | TGTTTTATTGAAACTATGCA+TGG | - | chr1.2:75114687-75114706 | MS.gene34142:intron | 25.0% |
AAAACCACTGTATCAATTTC+TGG | + | chr1.2:75114165-75114184 | None:intergenic | 30.0% | |
AAACAATAAGAGCTGAAAAG+GGG | + | chr1.2:75111433-75111452 | None:intergenic | 30.0% | |
AAACTTACTTTGTGCAAGAA+AGG | + | chr1.2:75114631-75114650 | None:intergenic | 30.0% | |
AAGATTTATCTGCAATTCTC+AGG | + | chr1.2:75112115-75112134 | None:intergenic | 30.0% | |
AATTTGGCAAACCAGAATAT+TGG | - | chr1.2:75114321-75114340 | MS.gene34142:intron | 30.0% | |
AGACAAACATTGTTAACAGA+TGG | + | chr1.2:75113211-75113230 | None:intergenic | 30.0% | |
ATCAAAAACATGTCTTTGCA+TGG | + | chr1.2:75111844-75111863 | None:intergenic | 30.0% | |
ATGTGAATTTCCTTTCACAT+AGG | - | chr1.2:75112957-75112976 | MS.gene34142:intron | 30.0% | |
ATTAGCATAAATGAAAGTGG+GGG | - | chr1.2:75110998-75111017 | MS.gene34142:CDS | 30.0% | |
ATTGAACATTTCTCGGATAT+TGG | - | chr1.2:75109996-75110015 | MS.gene34142:intron | 30.0% | |
ATTTATTTACAGACAAGCTG+AGG | - | chr1.2:75113636-75113655 | MS.gene34142:intron | 30.0% | |
ATTTCCTTTCACATAGGTAA+AGG | - | chr1.2:75112963-75112982 | MS.gene34142:intron | 30.0% | |
CAGCAAAAAACAAGAATGAA+TGG | + | chr1.2:75111665-75111684 | None:intergenic | 30.0% | |
CAGCAATATTTCTTACCAAA+AGG | + | chr1.2:75111629-75111648 | None:intergenic | 30.0% | |
CTATTGTTAGCTATGTACAA+AGG | - | chr1.2:75112393-75112412 | MS.gene34142:intron | 30.0% | |
CTGTTAACAATGTTTGTCTT+GGG | - | chr1.2:75113212-75113231 | MS.gene34142:intron | 30.0% | |
GAAAACAATAAGAGCTGAAA+AGG | + | chr1.2:75111435-75111454 | None:intergenic | 30.0% | |
GAAAATGGCATAGAAGTTAA+AGG | - | chr1.2:75113721-75113740 | MS.gene34142:intron | 30.0% | |
GAAGATATAGGAAAACTAGA+AGG | + | chr1.2:75111756-75111775 | None:intergenic | 30.0% | |
GAATCAAATGTACTAGTAAC+GGG | + | chr1.2:75110160-75110179 | None:intergenic | 30.0% | |
GATAGGACTTATTGATCAAA+TGG | + | chr1.2:75110655-75110674 | None:intergenic | 30.0% | |
GATATAGATGGATGCAATAT+GGG | - | chr1.2:75114531-75114550 | MS.gene34142:intron | 30.0% | |
GCTTGTCTGTAAATAAATGA+AGG | + | chr1.2:75113634-75113653 | None:intergenic | 30.0% | |
GGAATCAAATGTACTAGTAA+CGG | + | chr1.2:75110161-75110180 | None:intergenic | 30.0% | |
GTCATTCCAAAATATGGAAA+TGG | - | chr1.2:75114096-75114115 | MS.gene34142:intron | 30.0% | |
GTTATGATTGTGACACTAAT+CGG | - | chr1.2:75113935-75113954 | MS.gene34142:intron | 30.0% | |
GTTCTTTCTAATCGTCATAT+TGG | - | chr1.2:75111145-75111164 | MS.gene34142:intron | 30.0% | |
TAAACCAGAAATTGATACAG+TGG | - | chr1.2:75114158-75114177 | MS.gene34142:CDS | 30.0% | |
TAGTTGTGAACTAGTCATTA+TGG | - | chr1.2:75113584-75113603 | MS.gene34142:intron | 30.0% | |
TATGAAGAAGGCTAATTCTA+TGG | - | chr1.2:75110584-75110603 | MS.gene34142:CDS | 30.0% | |
TATTGTTAACCAACAGTATC+GGG | - | chr1.2:75112147-75112166 | MS.gene34142:intron | 30.0% | |
TCTGTTAACAATGTTTGTCT+TGG | - | chr1.2:75113211-75113230 | MS.gene34142:intron | 30.0% | |
TCTTCCGGTTTCATAAAATT+GGG | + | chr1.2:75109802-75109821 | None:intergenic | 30.0% | |
TGACAAGATTATTCTCTGAT+TGG | + | chr1.2:75114275-75114294 | None:intergenic | 30.0% | |
TGATATAGATGGATGCAATA+TGG | - | chr1.2:75114530-75114549 | MS.gene34142:intron | 30.0% | |
TTAAGGTTGTGTGATATAGA+TGG | - | chr1.2:75114519-75114538 | MS.gene34142:intron | 30.0% | |
TTGTTCAATACTTGATGTTG+AGG | - | chr1.2:75112039-75112058 | MS.gene34142:intron | 30.0% | |
TTTATCTTGATTCCTTTCTC+AGG | + | chr1.2:75114888-75114907 | None:intergenic | 30.0% | |
! | AATTTTATGAAACCGGAAGA+CGG | - | chr1.2:75109802-75109821 | MS.gene34142:CDS | 30.0% |
! | ATTCATTTTCCCTTTCTACT+CGG | + | chr1.2:75112698-75112717 | None:intergenic | 30.0% |
! | CGAGAATATTGAACAACTTT+TGG | + | chr1.2:75111779-75111798 | None:intergenic | 30.0% |
! | CTGATGCATATTCTCTTTTT+AGG | - | chr1.2:75112766-75112785 | MS.gene34142:CDS | 30.0% |
! | GATAAGTAAGGATCTTTTAG+GGG | - | chr1.2:75110517-75110536 | MS.gene34142:CDS | 30.0% |
! | TACTCCCAATTTTATGAAAC+CGG | - | chr1.2:75109795-75109814 | MS.gene34142:CDS | 30.0% |
! | TTTTCCACAGTATTATCTCA+GGG | - | chr1.2:75111593-75111612 | MS.gene34142:intron | 30.0% |
!! | AACAACTTTTGGGAAGATAT+AGG | + | chr1.2:75111768-75111787 | None:intergenic | 30.0% |
!! | ACTTAGACTTTTGAGAGTTT+TGG | + | chr1.2:75114071-75114090 | None:intergenic | 30.0% |
!! | ATGCAAAGACATGTTTTTGA+TGG | - | chr1.2:75111843-75111862 | MS.gene34142:intron | 30.0% |
!! | CAATTTCTGGTTTAAGTTTC+CGG | + | chr1.2:75114152-75114171 | None:intergenic | 30.0% |
!! | TCAAAAAGTGCTAAAGATGT+TGG | - | chr1.2:75113540-75113559 | MS.gene34142:intron | 30.0% |
!! | TGAGTTTCATTTCCACTTTT+AGG | - | chr1.2:75113100-75113119 | MS.gene34142:CDS | 30.0% |
!!! | CTGACACTGATTTTATTGTT+TGG | - | chr1.2:75112232-75112251 | MS.gene34142:intron | 30.0% |
AAAGAATCATTTCCGTCTTC+CGG | + | chr1.2:75109817-75109836 | None:intergenic | 35.0% | |
AACTCTCAAAAGTCTAAGTC+TGG | - | chr1.2:75114072-75114091 | MS.gene34142:intron | 35.0% | |
AAGAAAAGAACCGAGTAGAA+AGG | - | chr1.2:75112685-75112704 | MS.gene34142:intron | 35.0% | |
AATAATTGAATCCACTGTGC+TGG | + | chr1.2:75109910-75109929 | None:intergenic | 35.0% | |
AATTATACACCCGATACTGT+TGG | + | chr1.2:75112159-75112178 | None:intergenic | 35.0% | |
AGAAAAGAACCGAGTAGAAA+GGG | - | chr1.2:75112686-75112705 | MS.gene34142:intron | 35.0% | |
AGGACTTATTGATCAAATGG+TGG | + | chr1.2:75110652-75110671 | None:intergenic | 35.0% | |
ATGAAACTCATGAATCACAC+AGG | + | chr1.2:75113090-75113109 | None:intergenic | 35.0% | |
ATTAAACCTGACTCCTTTCA+TGG | - | chr1.2:75114357-75114376 | MS.gene34142:CDS | 35.0% | |
ATTAAATATGGGGGCAGAAA+GGG | + | chr1.2:75112561-75112580 | None:intergenic | 35.0% | |
ATTAAGGAAGGCTAATCACA+TGG | + | chr1.2:75110032-75110051 | None:intergenic | 35.0% | |
ATTCATTTGGCAGAAATTCC+AGG | - | chr1.2:75110212-75110231 | MS.gene34142:CDS | 35.0% | |
ATTTGAGAATGTGATGTTGG+AGG | - | chr1.2:75110874-75110893 | MS.gene34142:CDS | 35.0% | |
CATATCTCACTTTGATGCAA+TGG | - | chr1.2:75110674-75110693 | MS.gene34142:CDS | 35.0% | |
CCATCCTGCATAAAAATTGT+TGG | + | chr1.2:75114745-75114764 | None:intergenic | 35.0% | |
CCTAAATGTCCATTAAGTCA+AGG | + | chr1.2:75113275-75113294 | None:intergenic | 35.0% | |
CTAAATCCAAACCTAGAATG+AGG | - | chr1.2:75114862-75114881 | MS.gene34142:CDS | 35.0% | |
GAAAACGCTTGAAAAAGCTT+AGG | - | chr1.2:75113668-75113687 | MS.gene34142:intron | 35.0% | |
GAACAACTTCGTAGAGAATT+TGG | - | chr1.2:75114305-75114324 | MS.gene34142:intron | 35.0% | |
GCATCAAAGTGAGATATGAT+AGG | + | chr1.2:75110672-75110691 | None:intergenic | 35.0% | |
GCATCTGATTGTAATGTTTG+TGG | + | chr1.2:75113907-75113926 | None:intergenic | 35.0% | |
GCTTAGGCTTAAAGAACAAA+AGG | - | chr1.2:75113684-75113703 | MS.gene34142:intron | 35.0% | |
GGATACATTGATAAGACAAG+CGG | - | chr1.2:75109837-75109856 | MS.gene34142:CDS | 35.0% | |
GGTTGAACTTATTGATCCAA+GGG | - | chr1.2:75110695-75110714 | MS.gene34142:CDS | 35.0% | |
GTAGAAAGGGAAAATGAATC+TGG | - | chr1.2:75112699-75112718 | MS.gene34142:intron | 35.0% | |
GTCATTTGAGAATGTGATGT+TGG | - | chr1.2:75110871-75110890 | MS.gene34142:CDS | 35.0% | |
GTCTTCCGGTTTCATAAAAT+TGG | + | chr1.2:75109803-75109822 | None:intergenic | 35.0% | |
GTTCACCCATTAATTACAGA+AGG | - | chr1.2:75110306-75110325 | MS.gene34142:CDS | 35.0% | |
TACTATGTCTTTGTGTGTGT+GGG | + | chr1.2:75111328-75111347 | None:intergenic | 35.0% | |
TATTGAAACTATGCATGGCT+TGG | - | chr1.2:75114692-75114711 | MS.gene34142:intron | 35.0% | |
TCAGTTACAAATGCAACGAT+AGG | + | chr1.2:75110081-75110100 | None:intergenic | 35.0% | |
TCCAAACTTTACCACTATCA+CGG | + | chr1.2:75114128-75114147 | None:intergenic | 35.0% | |
TCCTGCATAAAAATTGTTGG+TGG | + | chr1.2:75114742-75114761 | None:intergenic | 35.0% | |
TCGGTTGAAAAAGCTTGATA+AGG | - | chr1.2:75110346-75110365 | MS.gene34142:CDS | 35.0% | |
TGAAAGGAGTCAGGTTTAAT+TGG | + | chr1.2:75114357-75114376 | None:intergenic | 35.0% | |
TGAACAAAACTCTCTGTCTT+TGG | + | chr1.2:75110291-75110310 | None:intergenic | 35.0% | |
TGGTTGAACTTATTGATCCA+AGG | - | chr1.2:75110694-75110713 | MS.gene34142:CDS | 35.0% | |
TGTCGGTGCAAAGTAATTTA+AGG | - | chr1.2:75114502-75114521 | MS.gene34142:intron | 35.0% | |
TGTTTGGGTATCTGTAAGTT+TGG | - | chr1.2:75112248-75112267 | MS.gene34142:intron | 35.0% | |
TTAGCATAAATGAAAGTGGG+GGG | - | chr1.2:75110999-75111018 | MS.gene34142:CDS | 35.0% | |
TTCATTATCACTCTTCCCTT+TGG | - | chr1.2:75112471-75112490 | MS.gene34142:intron | 35.0% | |
TTCATTTGGCAGAAATTCCA+GGG | - | chr1.2:75110213-75110232 | MS.gene34142:CDS | 35.0% | |
TTTAGTAGTTGAACCTTTGC+AGG | + | chr1.2:75110254-75110273 | None:intergenic | 35.0% | |
! | AAGAAGATTGATTCATCACC+AGG | - | chr1.2:75112084-75112103 | MS.gene34142:intron | 35.0% |
! | ATGGATGCAATATGGGTTAT+GGG | - | chr1.2:75114538-75114557 | MS.gene34142:intron | 35.0% |
! | CCAACAATTTTTATGCAGGA+TGG | - | chr1.2:75114742-75114761 | MS.gene34142:intron | 35.0% |
! | CCTTGACTTAATGGACATTT+AGG | - | chr1.2:75113272-75113291 | MS.gene34142:intron | 35.0% |
! | CTGGTTCCATTTCCATATTT+TGG | + | chr1.2:75114105-75114124 | None:intergenic | 35.0% |
! | CTTTTCCACAGTATTATCTC+AGG | - | chr1.2:75111592-75111611 | MS.gene34142:intron | 35.0% |
! | GTGACTGGTAATGTAAAAGA+GGG | + | chr1.2:75113253-75113272 | None:intergenic | 35.0% |
! | TCCACCAACAATTTTTATGC+AGG | - | chr1.2:75114738-75114757 | MS.gene34142:intron | 35.0% |
! | TCTGGAGTCATTCCAAAATA+TGG | - | chr1.2:75114090-75114109 | MS.gene34142:intron | 35.0% |
!! | AAGACATGTTTTTGATGGAG+AGG | - | chr1.2:75111848-75111867 | MS.gene34142:intron | 35.0% |
!! | AAGACTCACGAAGTTTTGAT+TGG | - | chr1.2:75114219-75114238 | MS.gene34142:intron | 35.0% |
!! | AGAAGCATTAGGTCAAATTG+AGG | + | chr1.2:75110477-75110496 | None:intergenic | 35.0% |
!! | ATCTGGTTCTTTGTGCAATT+TGG | + | chr1.2:75114193-75114212 | None:intergenic | 35.0% |
!! | GTAGGACTCTAAGATAAGTA+AGG | - | chr1.2:75110505-75110524 | MS.gene34142:CDS | 35.0% |
!! | TCTGGTTCTTTGTGCAATTT+GGG | + | chr1.2:75114192-75114211 | None:intergenic | 35.0% |
!!! | AGGGAAAAGTTTTTGAAGCT+AGG | + | chr1.2:75111954-75111973 | None:intergenic | 35.0% |
!!! | CTTCTATGCCATTTTCATGT+TGG | + | chr1.2:75113717-75113736 | None:intergenic | 35.0% |
!!! | GTGGATTTTTAGTTTCATGC+TGG | + | chr1.2:75114425-75114444 | None:intergenic | 35.0% |
!!! | TATCAAGCTTTTTCAACCGA+TGG | + | chr1.2:75110346-75110365 | None:intergenic | 35.0% |
AACCATTCCTTTCCTTTCCT+AGG | - | chr1.2:75109869-75109888 | MS.gene34142:CDS | 40.0% | |
AACCCATGAGTTTCTGAATC+AGG | + | chr1.2:75114810-75114829 | None:intergenic | 40.0% | |
AAGCAGATTCAGAAGGCTTT+CGG | - | chr1.2:75114583-75114602 | MS.gene34142:intron | 40.0% | |
AATTCCTCGCAACCTAAAAG+TGG | + | chr1.2:75113115-75113134 | None:intergenic | 40.0% | |
ACAATAGTACGTTGCGACTT+AGG | + | chr1.2:75114030-75114049 | None:intergenic | 40.0% | |
ACATTGATAAGACAAGCGGT+TGG | - | chr1.2:75109841-75109860 | MS.gene34142:CDS | 40.0% | |
ACCAAGCCATTAAAGAGACT+TGG | - | chr1.2:75112338-75112357 | MS.gene34142:intron | 40.0% | |
ACCATTCCTTTCCTTTCCTA+GGG | - | chr1.2:75109870-75109889 | MS.gene34142:CDS | 40.0% | |
ACTAGTTCACAACTATCACG+TGG | + | chr1.2:75113579-75113598 | None:intergenic | 40.0% | |
AGAAACTTGTGCAAGCAACT+AGG | + | chr1.2:75111902-75111921 | None:intergenic | 40.0% | |
AGCAATTTCGTCACATCATG+TGG | - | chr1.2:75114770-75114789 | MS.gene34142:CDS | 40.0% | |
AGTCAAGGATTGTGCAACAT+GGG | - | chr1.2:75114836-75114855 | MS.gene34142:CDS | 40.0% | |
AGTCCAGCAAATAGCTACAT+AGG | - | chr1.2:75112808-75112827 | MS.gene34142:CDS | 40.0% | |
ATATGACCATTACGTGTGCA+AGG | + | chr1.2:75110964-75110983 | None:intergenic | 40.0% | |
ATCAGTCAGGAGTTAAGCTT+TGG | - | chr1.2:75114388-75114407 | MS.gene34142:CDS | 40.0% | |
ATCCTCATCTACACCTTCAT+TGG | + | chr1.2:75113842-75113861 | None:intergenic | 40.0% | |
ATGGAGAGGTTGGAAAGATT+GGG | - | chr1.2:75111862-75111881 | MS.gene34142:intron | 40.0% | |
CACCTGATTCAGAAACTCAT+GGG | - | chr1.2:75114805-75114824 | MS.gene34142:CDS | 40.0% | |
CACTAGCCAAGTCTCTTTAA+TGG | + | chr1.2:75112347-75112366 | None:intergenic | 40.0% | |
CATCCTATGTAGCTATTTGC+TGG | + | chr1.2:75112814-75112833 | None:intergenic | 40.0% | |
CTACTATGTCTTTGTGTGTG+TGG | + | chr1.2:75111329-75111348 | None:intergenic | 40.0% | |
CTAGTTCACAACTATCACGT+GGG | + | chr1.2:75113578-75113597 | None:intergenic | 40.0% | |
CTATTGTGCAGAAGTGAAGT+AGG | + | chr1.2:75110749-75110768 | None:intergenic | 40.0% | |
CTTCTGGCATTTCAATGCTT+CGG | + | chr1.2:75113010-75113029 | None:intergenic | 40.0% | |
GATTAAATATGGGGGCAGAA+AGG | + | chr1.2:75112562-75112581 | None:intergenic | 40.0% | |
GCTTAAAGAACAAAAGGCGA+GGG | - | chr1.2:75113690-75113709 | MS.gene34142:intron | 40.0% | |
GGAAGACGGAAATGATTCTT+TGG | - | chr1.2:75109816-75109835 | MS.gene34142:CDS | 40.0% | |
GGTGAAAACAGACTTGTGAA+TGG | - | chr1.2:75110716-75110735 | MS.gene34142:CDS | 40.0% | |
GTGGAAAATTAATGTGTGCG+TGG | + | chr1.2:75110633-75110652 | None:intergenic | 40.0% | |
TACCAGTCACCTTGACTTAA+TGG | - | chr1.2:75113263-75113282 | MS.gene34142:intron | 40.0% | |
TATAGGAAAACTAGAAGGCC+TGG | + | chr1.2:75111751-75111770 | None:intergenic | 40.0% | |
TATGGGAACAAATCTCACGT+CGG | - | chr1.2:75114555-75114574 | MS.gene34142:intron | 40.0% | |
TCAAACTTCCCCAAACAAGA+GGG | + | chr1.2:75112209-75112228 | None:intergenic | 40.0% | |
TCAACTCTTCGAACACAACA+AGG | - | chr1.2:75111561-75111580 | MS.gene34142:intron | 40.0% | |
TCACCTGATTCAGAAACTCA+TGG | - | chr1.2:75114804-75114823 | MS.gene34142:CDS | 40.0% | |
TCGCAACGTACTATTGTCAA+TGG | - | chr1.2:75114033-75114052 | MS.gene34142:intron | 40.0% | |
TCGTGAGTCTTAACTTCATC+TGG | + | chr1.2:75114210-75114229 | None:intergenic | 40.0% | |
TGCAATTCTCAGGTATATCC+TGG | + | chr1.2:75112105-75112124 | None:intergenic | 40.0% | |
TGCAGGATATTGTTCAATCC+AGG | - | chr1.2:75111730-75111749 | MS.gene34142:intron | 40.0% | |
TTACAATCAGATGCACAGTC+AGG | - | chr1.2:75113913-75113932 | MS.gene34142:intron | 40.0% | |
TTCAAACTTCCCCAAACAAG+AGG | + | chr1.2:75112210-75112229 | None:intergenic | 40.0% | |
TTTCTTGCTAGAGCAGAGAT+TGG | - | chr1.2:75111917-75111936 | MS.gene34142:intron | 40.0% | |
! | AAGCCTTCTGAATCTGCTTT+TGG | + | chr1.2:75114582-75114601 | None:intergenic | 40.0% |
! | ATAGTGGTAAAGTTTGGAGC+CGG | - | chr1.2:75114130-75114149 | MS.gene34142:intron | 40.0% |
! | GATGGATGCAATATGGGTTA+TGG | - | chr1.2:75114537-75114556 | MS.gene34142:intron | 40.0% |
! | GGTGACTGGTAATGTAAAAG+AGG | + | chr1.2:75113254-75113273 | None:intergenic | 40.0% |
! | TATGCTGCAGCTTTTAGTCT+TGG | + | chr1.2:75114918-75114937 | None:intergenic | 40.0% |
! | TCTGTCTCAACACTTTGAAG+TGG | + | chr1.2:75114447-75114466 | None:intergenic | 40.0% |
! | TCTTGTTTGGGGAAGTTTGA+AGG | - | chr1.2:75112209-75112228 | MS.gene34142:intron | 40.0% |
! | TTTAGGGGCATATTGGGATA+AGG | - | chr1.2:75110532-75110551 | MS.gene34142:CDS | 40.0% |
!! | AGGATCTTTTAGGGGCATAT+TGG | - | chr1.2:75110525-75110544 | MS.gene34142:CDS | 40.0% |
!! | CATAAAATTGGGAGTACCTG+AGG | + | chr1.2:75109791-75109810 | None:intergenic | 40.0% |
!! | CATGCTTTAGAACAGCAACA+AGG | - | chr1.2:75109931-75109950 | MS.gene34142:intron | 40.0% |
!! | CATGTTTTTGATGGAGAGGT+TGG | - | chr1.2:75111852-75111871 | MS.gene34142:intron | 40.0% |
!! | GGATCTTTTAGGGGCATATT+GGG | - | chr1.2:75110526-75110545 | MS.gene34142:CDS | 40.0% |
!!! | AACCTCCTGGAAAGCATTTT+CGG | + | chr1.2:75111514-75111533 | None:intergenic | 40.0% |
!!! | ATTTCCACTTTTAGGTTGCG+AGG | - | chr1.2:75113108-75113127 | MS.gene34142:CDS | 40.0% |
!!! | GTGCAAGCAACTAGGTTTTT+TGG | + | chr1.2:75111894-75111913 | None:intergenic | 40.0% |
AAACCTGACTCCTTTCATGG+AGG | - | chr1.2:75114360-75114379 | MS.gene34142:CDS | 45.0% | |
AACTTTACCACTATCACGGC+TGG | + | chr1.2:75114124-75114143 | None:intergenic | 45.0% | |
AAGTCACATGCAGCCAAAGA+TGG | + | chr1.2:75113787-75113806 | None:intergenic | 45.0% | |
ACAGAAGTTGACGTAGTCCA+TGG | - | chr1.2:75114462-75114481 | MS.gene34142:intron | 45.0% | |
ACATAATCCTCGACGCACAA+TGG | - | chr1.2:75113984-75114003 | MS.gene34142:intron | 45.0% | |
ATGGGAACAAATCTCACGTC+GGG | - | chr1.2:75114556-75114575 | MS.gene34142:intron | 45.0% | |
ATTGAAATGCCAGAAGCTGC+TGG | - | chr1.2:75113014-75113033 | MS.gene34142:intron | 45.0% | |
ATTTGGCAGAAATTCCAGGG+TGG | - | chr1.2:75110216-75110235 | MS.gene34142:CDS | 45.0% | |
CACGCCTTTACCTATGTGAA+AGG | + | chr1.2:75112970-75112989 | None:intergenic | 45.0% | |
CAGTCAAGGATTGTGCAACA+TGG | - | chr1.2:75114835-75114854 | MS.gene34142:CDS | 45.0% | |
CATGTTGCACAATCCTTGAC+TGG | + | chr1.2:75114837-75114856 | None:intergenic | 45.0% | |
CGTTCTTTGTCCTTCTTGTC+TGG | - | chr1.2:75111238-75111257 | MS.gene34142:intron | 45.0% | |
CTGATTGTTGCCTCCATGAA+AGG | + | chr1.2:75114373-75114392 | None:intergenic | 45.0% | |
CTTTCACATAGGTAAAGGCG+TGG | - | chr1.2:75112968-75112987 | MS.gene34142:intron | 45.0% | |
GATGGAGAGGTTGGAAAGAT+TGG | - | chr1.2:75111861-75111880 | MS.gene34142:intron | 45.0% | |
GATTTGCCTTGCACACGTAA+TGG | - | chr1.2:75110955-75110974 | MS.gene34142:CDS | 45.0% | |
GCCAAGTCTCTTTAATGGCT+TGG | + | chr1.2:75112342-75112361 | None:intergenic | 45.0% | |
GCTAGAGCAGAGATTGGTAA+TGG | - | chr1.2:75111923-75111942 | MS.gene34142:intron | 45.0% | |
GCTTCTCCTGACCAATATTC+TGG | + | chr1.2:75114335-75114354 | None:intergenic | 45.0% | |
GCTTGTACAATTGAAGACCC+TGG | + | chr1.2:75111537-75111556 | None:intergenic | 45.0% | |
GGCAAACCAGAATATTGGTC+AGG | - | chr1.2:75114326-75114345 | MS.gene34142:intron | 45.0% | |
GGCATAAACGTGTACACCAT+CGG | - | chr1.2:75110327-75110346 | MS.gene34142:CDS | 45.0% | |
GGCTTAAAGAACAAAAGGCG+AGG | - | chr1.2:75113689-75113708 | MS.gene34142:intron | 45.0% | |
GTCCATTAAGTCAAGGTGAC+TGG | + | chr1.2:75113268-75113287 | None:intergenic | 45.0% | |
TCATGGGTTCAAACCAGTCA+AGG | - | chr1.2:75114821-75114840 | MS.gene34142:CDS | 45.0% | |
TGCGTCATTTCTTACCACAC+TGG | + | chr1.2:75113369-75113388 | None:intergenic | 45.0% | |
TGTGTAGCTCTCTGTAGAAG+AGG | - | chr1.2:75110835-75110854 | MS.gene34142:CDS | 45.0% | |
TTACAGACAAGCTGAGGCTT+TGG | - | chr1.2:75113642-75113661 | MS.gene34142:intron | 45.0% | |
TTGTGACACTGATCAGAACG+TGG | - | chr1.2:75113879-75113898 | MS.gene34142:intron | 45.0% | |
! | AAAGGGTGCATCAGAAACAC+AGG | - | chr1.2:75113739-75113758 | MS.gene34142:intron | 45.0% |
! | CACAAGTCTGTTTTCACCCT+TGG | + | chr1.2:75110714-75110733 | None:intergenic | 45.0% |
! | CACCAATGAAGGTGTAGATG+AGG | - | chr1.2:75113837-75113856 | MS.gene34142:CDS | 45.0% |
! | CTACACCTTCATTGGTGTCT+GGG | + | chr1.2:75113834-75113853 | None:intergenic | 45.0% |
! | TCTACACCTTCATTGGTGTC+TGG | + | chr1.2:75113835-75113854 | None:intergenic | 45.0% |
! | TCTTCCCTTTGGCTTCTTCA+CGG | - | chr1.2:75112482-75112501 | MS.gene34142:intron | 45.0% |
! | TGGACATTTAGGACTTCGAG+TGG | - | chr1.2:75113283-75113302 | MS.gene34142:intron | 45.0% |
!! | GCCGTGATAGTGGTAAAGTT+TGG | - | chr1.2:75114124-75114143 | MS.gene34142:intron | 45.0% |
!! | GTCTCAACACTTTGAAGTGG+TGG | + | chr1.2:75114444-75114463 | None:intergenic | 45.0% |
!! | TTAGTTTCATGCTGGCTCAC+TGG | + | chr1.2:75114417-75114436 | None:intergenic | 45.0% |
!!! | TCCTGGAAAGCATTTTCGGT+GGG | + | chr1.2:75111510-75111529 | None:intergenic | 45.0% |
!!! | AAAAATATTTTTACTATAAA+AGG | + | chr1.2:75111974-75111993 | None:intergenic | 5.0% |
!!! | AAAATATTTTTACTATAAAA+GGG | + | chr1.2:75111973-75111992 | None:intergenic | 5.0% |
AATGCTTTCCAGGAGGTTCC+AGG | - | chr1.2:75111516-75111535 | MS.gene34142:intron | 50.0% | |
AATGGAACCAGCCGTGATAG+TGG | - | chr1.2:75114114-75114133 | MS.gene34142:intron | 50.0% | |
ACCTTTGCAGGAGAGAACAG+AGG | + | chr1.2:75110242-75110261 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGAG+AGG | + | chr1.2:75111999-75112018 | None:intergenic | 50.0% | |
AGGAGGAAGCTGCTCAAAGA+AGG | - | chr1.2:75113043-75113062 | MS.gene34142:intron | 50.0% | |
AGGGCATGAAATGAACCCTG+AGG | - | chr1.2:75112517-75112536 | MS.gene34142:intron | 50.0% | |
ATCGCCAGAGGAACCATCTT+TGG | - | chr1.2:75113771-75113790 | MS.gene34142:intron | 50.0% | |
ATGCTTTCCAGGAGGTTCCA+GGG | - | chr1.2:75111517-75111536 | MS.gene34142:intron | 50.0% | |
CACCGAAAATGCTTTCCAGG+AGG | - | chr1.2:75111509-75111528 | MS.gene34142:intron | 50.0% | |
CATGGAGGCAACAATCAGTC+AGG | - | chr1.2:75114375-75114394 | MS.gene34142:CDS | 50.0% | |
CATTGCCCAGACACCAATGA+AGG | - | chr1.2:75113826-75113845 | MS.gene34142:CDS | 50.0% | |
CCACAGTATTATCTCAGGGC+TGG | - | chr1.2:75111597-75111616 | MS.gene34142:intron | 50.0% | |
CCAGCCCTGAGATAATACTG+TGG | + | chr1.2:75111600-75111619 | None:intergenic | 50.0% | |
CCTAGAATGAGGCCTGAGAA+AGG | - | chr1.2:75114873-75114892 | MS.gene34142:CDS | 50.0% | |
CCTTTCTCAGGCCTCATTCT+AGG | + | chr1.2:75114876-75114895 | None:intergenic | 50.0% | |
CTCAGGCCTCATTCTAGGTT+TGG | + | chr1.2:75114871-75114890 | None:intergenic | 50.0% | |
CTCGGCATGATATTGCACGA+GGG | - | chr1.2:75112296-75112315 | MS.gene34142:intron | 50.0% | |
CTTCCCGTGAAGAAGCCAAA+GGG | + | chr1.2:75112489-75112508 | None:intergenic | 50.0% | |
GAGGCAGTAAGTTTCGCAAC+TGG | + | chr1.2:75109772-75109791 | None:intergenic | 50.0% | |
GCATAAATGAAAGTGGGGGG+AGG | - | chr1.2:75111002-75111021 | MS.gene34142:CDS | 50.0% | |
GCCCTAGGAAAGGAAAGGAA+TGG | + | chr1.2:75109874-75109893 | None:intergenic | 50.0% | |
GCGAGGGACCAACATGAAAA+TGG | - | chr1.2:75113706-75113725 | MS.gene34142:intron | 50.0% | |
GCTCTCTGTAGAAGAGGCAA+AGG | - | chr1.2:75110841-75110860 | MS.gene34142:CDS | 50.0% | |
GGGCCAAAAGCAGATTCAGA+AGG | - | chr1.2:75114576-75114595 | MS.gene34142:intron | 50.0% | |
GTGCATCAGAAACACAGGAG+AGG | - | chr1.2:75113744-75113763 | MS.gene34142:intron | 50.0% | |
GTTGCGAAACTTACTGCCTC+AGG | - | chr1.2:75109772-75109791 | MS.gene34142:CDS | 50.0% | |
TCAGGGTTCATTTCATGCCC+TGG | + | chr1.2:75112518-75112537 | None:intergenic | 50.0% | |
TGCCACACTTCCCTCTTGTT+TGG | - | chr1.2:75112196-75112215 | MS.gene34142:intron | 50.0% | |
TTCACGGGAAGGTTGTACCA+GGG | - | chr1.2:75112498-75112517 | MS.gene34142:intron | 50.0% | |
TTCCTTTCCTTTCCTAGGGC+TGG | - | chr1.2:75109874-75109893 | MS.gene34142:CDS | 50.0% | |
TTGCCTCCATGAAAGGAGTC+AGG | + | chr1.2:75114366-75114385 | None:intergenic | 50.0% | |
! | AAAGGCTTTTGCAGCATCGC+TGG | + | chr1.2:75114613-75114632 | None:intergenic | 50.0% |
! | CCACACTTCCCTCTTGTTTG+GGG | - | chr1.2:75112198-75112217 | MS.gene34142:intron | 50.0% |
! | CTTCCCTTTGGCTTCTTCAC+GGG | - | chr1.2:75112483-75112502 | MS.gene34142:intron | 50.0% |
! | GCCACACTTCCCTCTTGTTT+GGG | - | chr1.2:75112197-75112216 | MS.gene34142:intron | 50.0% |
!!! | CCTGGAAAGCATTTTCGGTG+GGG | + | chr1.2:75111509-75111528 | None:intergenic | 50.0% |
!!! | CTCCTGGAAAGCATTTTCGG+TGG | + | chr1.2:75111511-75111530 | None:intergenic | 50.0% |
!!! | CTGGAAAGCATTTTCGGTGG+GGG | + | chr1.2:75111508-75111527 | None:intergenic | 50.0% |
AGGAGAGGAGATATCGCCAG+AGG | - | chr1.2:75113759-75113778 | MS.gene34142:intron | 55.0% | |
CACCAGCCCTAGGAAAGGAA+AGG | + | chr1.2:75109879-75109898 | None:intergenic | 55.0% | |
CCCCAAACAAGAGGGAAGTG+TGG | + | chr1.2:75112201-75112220 | None:intergenic | 55.0% | |
CCCCACCGAAAATGCTTTCC+AGG | - | chr1.2:75111506-75111525 | MS.gene34142:intron | 55.0% | |
CCTCGGCATGATATTGCACG+AGG | - | chr1.2:75112295-75112314 | MS.gene34142:intron | 55.0% | |
CCTCGTGCAATATCATGCCG+AGG | + | chr1.2:75112298-75112317 | None:intergenic | 55.0% | |
CCTTCCCGTGAAGAAGCCAA+AGG | + | chr1.2:75112490-75112509 | None:intergenic | 55.0% | |
CTTAGGATGCCTTAGCCGTC+TGG | + | chr1.2:75114013-75114032 | None:intergenic | 55.0% | |
CTTCACGGGAAGGTTGTACC+AGG | - | chr1.2:75112497-75112516 | MS.gene34142:intron | 55.0% | |
CTTTCCTTTCCTAGGGCTGG+TGG | - | chr1.2:75109877-75109896 | MS.gene34142:CDS | 55.0% | |
GAAATGCCAGAAGCTGCTGG+TGG | - | chr1.2:75113017-75113036 | MS.gene34142:intron | 55.0% | |
GCAGCCAAAGATGGTTCCTC+TGG | + | chr1.2:75113778-75113797 | None:intergenic | 55.0% | |
GCCTCTGTTCTCTCCTGCAA+AGG | - | chr1.2:75110238-75110257 | MS.gene34142:CDS | 55.0% | |
TTGAAGACCCTGGAACCTCC+TGG | + | chr1.2:75111527-75111546 | None:intergenic | 55.0% | |
! | CCTTTGGCTTCTTCACGGGA+AGG | - | chr1.2:75112487-75112506 | MS.gene34142:intron | 55.0% |
!!! | CAGGGCTGGTTTCTCCCTTT+TGG | - | chr1.2:75111611-75111630 | MS.gene34142:intron | 55.0% |
ATGCCAGAAGCTGCTGGTGG+AGG | - | chr1.2:75113020-75113039 | MS.gene34142:intron | 60.0% | |
CAATGGCTGCCAGACGGCTA+AGG | - | chr1.2:75114001-75114020 | MS.gene34142:intron | 60.0% | |
GACGCACAATGGCTGCCAGA+CGG | - | chr1.2:75113995-75114014 | MS.gene34142:intron | 60.0% | |
GTCACCACCAGCCCTAGGAA+AGG | + | chr1.2:75109884-75109903 | None:intergenic | 60.0% | |
! | TTCCTAGGGCTGGTGGTGAC+AGG | - | chr1.2:75109884-75109903 | MS.gene34142:CDS | 60.0% |
CCAGAAGCTGCTGGTGGAGG+AGG | - | chr1.2:75113023-75113042 | MS.gene34142:intron | 65.0% | |
CCAGGGACAGAGTCGCCTCA+GGG | + | chr1.2:75112535-75112554 | None:intergenic | 65.0% | |
CCTCCTCCACCAGCAGCTTC+TGG | + | chr1.2:75113026-75113045 | None:intergenic | 65.0% | |
CTGGCAGCCATTGTGCGTCG+AGG | + | chr1.2:75113994-75114013 | None:intergenic | 65.0% | |
GAAGCTGCTGGTGGAGGAGG+AGG | - | chr1.2:75113026-75113045 | MS.gene34142:intron | 65.0% | |
GGAGAGAACAGAGGCCACCC+TGG | + | chr1.2:75110233-75110252 | None:intergenic | 65.0% | |
GGGGGCAGAAAGGGATGCCA+GGG | + | chr1.2:75112552-75112571 | None:intergenic | 65.0% | |
GTGGTGACAGGCCAGCACAG+TGG | - | chr1.2:75109896-75109915 | MS.gene34142:CDS | 65.0% | |
TGGGGGCAGAAAGGGATGCC+AGG | + | chr1.2:75112553-75112572 | None:intergenic | 65.0% | |
CCCTGAGGCGACTCTGTCCC+TGG | - | chr1.2:75112532-75112551 | MS.gene34142:intron | 70.0% | |
GCCAGGGACAGAGTCGCCTC+AGG | + | chr1.2:75112536-75112555 | None:intergenic | 70.0% | |
GGCCTGTCACCACCAGCCCT+AGG | + | chr1.2:75109889-75109908 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 75109766 | 75114938 | 75109766 | ID=MS.gene34142 |
chr1.2 | mRNA | 75109766 | 75114938 | 75109766 | ID=MS.gene34142.t1;Parent=MS.gene34142 |
chr1.2 | exon | 75114752 | 75114938 | 75114752 | ID=MS.gene34142.t1.exon1;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75114752 | 75114938 | 75114752 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75114337 | 75114479 | 75114337 | ID=MS.gene34142.t1.exon2;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75114337 | 75114479 | 75114337 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75114151 | 75114195 | 75114151 | ID=MS.gene34142.t1.exon3;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75114151 | 75114195 | 75114151 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75113809 | 75113862 | 75113809 | ID=MS.gene34142.t1.exon4;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75113809 | 75113862 | 75113809 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75113072 | 75113176 | 75113072 | ID=MS.gene34142.t1.exon5;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75113072 | 75113176 | 75113072 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75112766 | 75112969 | 75112766 | ID=MS.gene34142.t1.exon6;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75112766 | 75112969 | 75112766 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75111640 | 75111725 | 75111640 | ID=MS.gene34142.t1.exon7;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75111640 | 75111725 | 75111640 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75110062 | 75111056 | 75110062 | ID=MS.gene34142.t1.exon8;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75110062 | 75111056 | 75110062 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
chr1.2 | exon | 75109766 | 75109944 | 75109766 | ID=MS.gene34142.t1.exon9;Parent=MS.gene34142.t1 |
chr1.2 | CDS | 75109766 | 75109944 | 75109766 | ID=cds.MS.gene34142.t1;Parent=MS.gene34142.t1 |
Gene Sequence |
Protein sequence |