Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34363.t1 | KEH43828.1 | 86 | 578 | 61 | 5 | 207 | 775 | 15 | 581 | 1.20E-254 | 889.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34363.t1 | Q6NPG7 | 45.7 | 184 | 95 | 2 | 1 | 182 | 1 | 181 | 2.1e-37 | 159.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34363.t1 | A0A072VQY2 | 86.0 | 578 | 61 | 5 | 207 | 775 | 15 | 581 | 8.6e-255 | 889.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene34363.t1 | TF | CPP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34363.t1 | MTR_1g103230 | 86.159 | 578 | 60 | 5 | 207 | 775 | 15 | 581 | 0.0 | 966 |
| MS.gene34363.t1 | MTR_1g103240 | 93.478 | 184 | 10 | 1 | 1 | 182 | 1 | 184 | 2.75e-113 | 342 |
| MS.gene34363.t1 | MTR_1g103240 | 95.062 | 162 | 8 | 0 | 1 | 162 | 1 | 162 | 2.03e-102 | 313 |
| MS.gene34363.t1 | MTR_1g103240 | 95.062 | 162 | 8 | 0 | 1 | 162 | 1 | 162 | 7.80e-102 | 311 |
| MS.gene34363.t1 | MTR_1g103240 | 95.062 | 162 | 8 | 0 | 1 | 162 | 1 | 162 | 1.32e-101 | 311 |
| MS.gene34363.t1 | MTR_1g103240 | 95.062 | 162 | 8 | 0 | 1 | 162 | 1 | 162 | 1.45e-101 | 311 |
| MS.gene34363.t1 | MTR_4g032370 | 79.459 | 185 | 35 | 1 | 1 | 182 | 1 | 185 | 3.41e-95 | 295 |
| MS.gene34363.t1 | MTR_1g103240 | 95.139 | 144 | 7 | 0 | 1 | 144 | 1 | 144 | 3.44e-90 | 280 |
| MS.gene34363.t1 | MTR_5g006530 | 34.195 | 658 | 268 | 19 | 207 | 761 | 22 | 617 | 5.65e-79 | 270 |
| MS.gene34363.t1 | MTR_1g103240 | 91.241 | 137 | 10 | 1 | 48 | 182 | 1 | 137 | 5.14e-77 | 245 |
| MS.gene34363.t1 | MTR_5g006530 | 38.551 | 428 | 175 | 10 | 362 | 761 | 26 | 393 | 6.55e-68 | 234 |
| MS.gene34363.t1 | MTR_1g103190 | 48.986 | 296 | 82 | 10 | 428 | 702 | 4 | 251 | 2.08e-59 | 202 |
| MS.gene34363.t1 | MTR_1g103220 | 39.739 | 307 | 80 | 8 | 208 | 487 | 15 | 243 | 1.23e-45 | 164 |
| MS.gene34363.t1 | MTR_1g012020 | 34.866 | 261 | 152 | 9 | 530 | 776 | 389 | 645 | 5.18e-32 | 134 |
| MS.gene34363.t1 | MTR_6g087590 | 42.222 | 135 | 68 | 4 | 631 | 761 | 128 | 256 | 2.33e-22 | 102 |
| MS.gene34363.t1 | MTR_8g103320 | 41.481 | 135 | 69 | 4 | 631 | 761 | 83 | 211 | 2.37e-22 | 101 |
| MS.gene34363.t1 | MTR_3g110122 | 43.200 | 125 | 68 | 3 | 631 | 755 | 148 | 269 | 8.27e-21 | 97.8 |
| MS.gene34363.t1 | MTR_1g103180 | 40.146 | 137 | 66 | 3 | 548 | 683 | 104 | 225 | 7.72e-20 | 92.4 |
| MS.gene34363.t1 | MTR_1g103180 | 58.228 | 79 | 22 | 3 | 491 | 563 | 293 | 366 | 6.39e-15 | 77.8 |
| MS.gene34363.t1 | MTR_1g103180 | 37.500 | 152 | 75 | 6 | 382 | 520 | 18 | 162 | 2.47e-12 | 69.7 |
| MS.gene34363.t1 | MTR_1g103180 | 70.732 | 41 | 12 | 0 | 208 | 248 | 62 | 102 | 2.75e-11 | 66.6 |
| MS.gene34363.t1 | MTR_2g049305 | 42.623 | 122 | 58 | 3 | 579 | 696 | 22 | 135 | 1.39e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34363.t1 | AT3G22780 | 55.975 | 159 | 67 | 2 | 615 | 771 | 385 | 542 | 1.10e-48 | 184 |
| MS.gene34363.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 610 | 761 | 338 | 484 | 2.60e-46 | 176 |
| MS.gene34363.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 610 | 761 | 339 | 485 | 2.61e-46 | 176 |
| MS.gene34363.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 610 | 761 | 358 | 504 | 3.18e-46 | 176 |
| MS.gene34363.t1 | AT3G22760 | 52.500 | 160 | 74 | 2 | 615 | 773 | 188 | 346 | 1.12e-45 | 171 |
| MS.gene34363.t1 | AT5G43822 | 44.974 | 189 | 99 | 2 | 1 | 187 | 1 | 186 | 1.15e-45 | 162 |
| MS.gene34363.t1 | AT3G22760 | 52.500 | 160 | 74 | 2 | 615 | 773 | 311 | 469 | 5.00e-45 | 171 |
| MS.gene34363.t1 | AT3G04850 | 49.286 | 140 | 70 | 1 | 628 | 767 | 450 | 588 | 4.01e-37 | 148 |
| MS.gene34363.t1 | AT5G25790 | 39.735 | 151 | 81 | 4 | 631 | 781 | 95 | 235 | 9.28e-24 | 105 |
| MS.gene34363.t1 | AT5G25790 | 37.748 | 151 | 88 | 3 | 631 | 781 | 95 | 239 | 5.84e-23 | 103 |
| MS.gene34363.t1 | AT5G25790 | 38.961 | 154 | 82 | 4 | 631 | 781 | 95 | 239 | 8.05e-23 | 102 |
| MS.gene34363.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 631 | 755 | 119 | 241 | 1.02e-20 | 97.4 |
| MS.gene34363.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 631 | 755 | 119 | 241 | 1.19e-20 | 97.1 |
| MS.gene34363.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 631 | 755 | 119 | 241 | 1.20e-20 | 97.1 |
| MS.gene34363.t1 | AT4G29000 | 39.716 | 141 | 63 | 4 | 631 | 761 | 132 | 260 | 5.34e-20 | 95.1 |
| MS.gene34363.t1 | AT3G16160 | 42.276 | 123 | 66 | 3 | 631 | 753 | 66 | 183 | 4.48e-18 | 87.4 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCCAATGTTGCTTTAA+TGG | 0.092114 | 1.2:-76830325 | MS.gene34363:CDS |
| TATGCCTTCGTAATGATTTA+AGG | 0.098318 | 1.2:+76829598 | None:intergenic |
| TAGAAATGCTTCCCATATTT+TGG | 0.147291 | 1.2:-76841321 | MS.gene34363:CDS |
| CCAGAATTCTTTCGAACTTT+AGG | 0.204484 | 1.2:+76828544 | None:intergenic |
| CCTGCAACCTATCCAAAATA+TGG | 0.222084 | 1.2:+76841309 | None:intergenic |
| TTGTTCTTTGAATAACATTT+TGG | 0.238695 | 1.2:-76841086 | MS.gene34363:CDS |
| CCTAAAGTTCGAAAGAATTC+TGG | 0.241815 | 1.2:-76828544 | MS.gene34363:CDS |
| GACGAGTGAAGTGCAATTTA+AGG | 0.271122 | 1.2:-76829372 | MS.gene34363:CDS |
| TTGCACTTCACTCGTCCTTT+TGG | 0.274158 | 1.2:+76829379 | None:intergenic |
| CTTTGAAGCTGGAGCTTTGT+TGG | 0.274516 | 1.2:+76828411 | None:intergenic |
| ATCTTCATACCTGGGCATTA+TGG | 0.285536 | 1.2:+76839753 | None:intergenic |
| TCGATTGATCTAGTTTCTTC+TGG | 0.291859 | 1.2:-76829287 | MS.gene34363:CDS |
| TAAGTGCAGCTCGGTGATTC+AGG | 0.293566 | 1.2:+76829545 | None:intergenic |
| TACTGGTAGATTGTGGTAAC+AGG | 0.297737 | 1.2:+76830463 | None:intergenic |
| TTTGAAGCTGGAGCTTTGTT+GGG | 0.308021 | 1.2:+76828412 | None:intergenic |
| TTTCTGTCTGTTGCGGCTAT+TGG | 0.313269 | 1.2:+76830363 | None:intergenic |
| GAATATGGACTCGTCGTTAA+AGG | 0.316508 | 1.2:+76830883 | None:intergenic |
| TTGAAGGTGGAACATTTATT+CGG | 0.321966 | 1.2:-76830539 | MS.gene34363:CDS |
| CTTCAGATATCCAACAATTA+TGG | 0.334239 | 1.2:-76841160 | MS.gene34363:CDS |
| TGGTGTGAGAGATGCTCTTT+TGG | 0.338855 | 1.2:-76841119 | MS.gene34363:CDS |
| AATGTTGACCCACTTGCTTT+TGG | 0.345110 | 1.2:-76830420 | MS.gene34363:CDS |
| CACCCTTCACATTTACAACT+TGG | 0.349859 | 1.2:+76828217 | None:intergenic |
| GTCAAAATTCCGAAAAGTTA+AGG | 0.352334 | 1.2:-76841393 | MS.gene34363:CDS |
| CCTTCCTCAGTACGGAGATT+AGG | 0.355956 | 1.2:+76833167 | None:intergenic |
| CAAGTACCTCGTGAGGAATA+TGG | 0.357398 | 1.2:+76830868 | None:intergenic |
| ACGCTGCTGCAGTAGTTTCA+TGG | 0.357721 | 1.2:+76840317 | None:intergenic |
| ACCTAGACTTATTGATTGCT+TGG | 0.363166 | 1.2:-76840283 | MS.gene34363:CDS |
| GATGGCAGGCAACTAGTTAA+AGG | 0.377600 | 1.2:-76840357 | MS.gene34363:CDS |
| CACCAATGGAGACACATTTA+CGG | 0.379389 | 1.2:-76829472 | MS.gene34363:CDS |
| ACAGCCTCAGATGAAAGTTC+AGG | 0.391141 | 1.2:+76830741 | None:intergenic |
| CTGCGTCGTCGCTTTGAAGC+TGG | 0.396100 | 1.2:+76828400 | None:intergenic |
| CATTGCAATGCTAGTGATCT+TGG | 0.402962 | 1.2:-76833218 | MS.gene34363:intron |
| TGAAATTGAAGACAATCCTT+TGG | 0.408389 | 1.2:-76830388 | MS.gene34363:CDS |
| GTTTAGAGTACCATAATTGT+TGG | 0.420806 | 1.2:+76841150 | None:intergenic |
| AAGTCATCAGTTCACATTCC+TGG | 0.424450 | 1.2:-76829425 | MS.gene34363:CDS |
| AGAGTTGCTCCTTTGCATAC+TGG | 0.425375 | 1.2:+76829709 | None:intergenic |
| AATTGTGGCTGCTTTGCTGC+TGG | 0.427566 | 1.2:-76828682 | MS.gene34363:CDS |
| AAGTATCTTCTTGAATTACT+TGG | 0.428004 | 1.2:-76830615 | MS.gene34363:CDS |
| AAGTTATTGTAATCACAATC+TGG | 0.434332 | 1.2:+76830510 | None:intergenic |
| ACCCTTCACATTTACAACTT+GGG | 0.434704 | 1.2:+76828218 | None:intergenic |
| TGAAGGTGGAACATTTATTC+GGG | 0.437173 | 1.2:-76830538 | MS.gene34363:CDS |
| TAGTTTCTGACCACAATTTG+AGG | 0.447183 | 1.2:+76828514 | None:intergenic |
| AGACTTATTGATTGCTTGGA+TGG | 0.452002 | 1.2:-76840279 | MS.gene34363:CDS |
| CTCCTACTCGCAGTGGTGGC+AGG | 0.454782 | 1.2:-76827958 | MS.gene34363:intron |
| CCCTTCACATTTACAACTTG+GGG | 0.459373 | 1.2:+76828219 | None:intergenic |
| TCTTGTTCATCCGTACCATC+TGG | 0.468909 | 1.2:+76830582 | None:intergenic |
| TTAAATATTTCTGTAAGTCA+AGG | 0.471447 | 1.2:-76829518 | MS.gene34363:CDS |
| CTGCAACCTATCCAAAATAT+GGG | 0.477058 | 1.2:+76841310 | None:intergenic |
| ATTTAGATCAAAACATGAAA+AGG | 0.486877 | 1.2:-76829334 | MS.gene34363:CDS |
| TTCTGGTTCAGAACATGTAA+AGG | 0.491375 | 1.2:-76829270 | MS.gene34363:CDS |
| ATATCTCATGTAGAAACAAC+AGG | 0.506182 | 1.2:+76840256 | None:intergenic |
| TGGTGCGCTACAACAACTCT+TGG | 0.510846 | 1.2:-76833198 | MS.gene34363:CDS |
| CCTTCGTAATGATTTAAGGC+TGG | 0.512377 | 1.2:+76829602 | None:intergenic |
| GCTATCCATTAAAGCAACAT+TGG | 0.513739 | 1.2:+76830320 | None:intergenic |
| TCTGTCAGAGTATCCGCAAA+AGG | 0.520220 | 1.2:-76829229 | MS.gene34363:CDS |
| TAAATATTTCTGTAAGTCAA+GGG | 0.524834 | 1.2:-76829517 | MS.gene34363:CDS |
| TGGTTCCTCACCTCAAATTG+TGG | 0.524835 | 1.2:-76828524 | MS.gene34363:intron |
| GCAGAATACGATGCAAGTGC+AGG | 0.525356 | 1.2:-76828381 | MS.gene34363:CDS |
| CGAACTTTAGGAACAAATGC+AGG | 0.526329 | 1.2:+76828556 | None:intergenic |
| TGCGCTACAACAACTCTTGG+AGG | 0.527390 | 1.2:-76833195 | MS.gene34363:CDS |
| GATAGCAATCAAATTAAAAG+AGG | 0.527572 | 1.2:-76830303 | MS.gene34363:CDS |
| GGAACAAGTCAGATCTAACT+AGG | 0.530885 | 1.2:-76829091 | MS.gene34363:CDS |
| CGAAAATATACATGGTAGGA+AGG | 0.533470 | 1.2:-76828194 | MS.gene34363:CDS |
| TGCTTGATTTCTGTCTGTTG+CGG | 0.536356 | 1.2:+76830356 | None:intergenic |
| CACACTTCTGTGAATCACTA+GGG | 0.539386 | 1.2:+76829660 | None:intergenic |
| AGAGTATCCGCAAAAGGAAG+AGG | 0.539876 | 1.2:-76829223 | MS.gene34363:CDS |
| TTGAAGCTGGAGCTTTGTTG+GGG | 0.541047 | 1.2:+76828413 | None:intergenic |
| GTTGCGGCTATTGGTTCCAA+AGG | 0.544179 | 1.2:+76830372 | None:intergenic |
| TTAAAGGAGATAGAGTATTG+AGG | 0.545460 | 1.2:+76830993 | None:intergenic |
| TTCAGAACATGTAAAGGAAG+AGG | 0.548580 | 1.2:-76829264 | MS.gene34363:CDS |
| ATACAGTTCTGCAAGCTCGC+AGG | 0.548799 | 1.2:-76828600 | MS.gene34363:CDS |
| CTTGCATACCTTCCTCAGTA+CGG | 0.549386 | 1.2:+76833159 | None:intergenic |
| AACTTACAAAGTCCTTCTCA+TGG | 0.552732 | 1.2:+76841060 | None:intergenic |
| ACACACTTCTGTGAATCACT+AGG | 0.552964 | 1.2:+76829659 | None:intergenic |
| CCTAATCTCCGTACTGAGGA+AGG | 0.555237 | 1.2:-76833167 | MS.gene34363:CDS |
| TCCGTCAGAGTACTCCCAAA+AGG | 0.555631 | 1.2:-76829394 | MS.gene34363:CDS |
| AAGTTAAGGAAGAAATGAAT+CGG | 0.557220 | 1.2:-76841379 | MS.gene34363:CDS |
| ACTGAGACGCTGAACTCACT+TGG | 0.558175 | 1.2:-76830941 | MS.gene34363:CDS |
| ATCTCAAGTCTCTGCACCAA+TGG | 0.560130 | 1.2:-76829486 | MS.gene34363:CDS |
| ATGAAAAGATGTCTTCTCAA+AGG | 0.565868 | 1.2:-76829571 | MS.gene34363:CDS |
| GCTGCTGGAGTCTACTGCAC+AGG | 0.566140 | 1.2:-76828667 | MS.gene34363:CDS |
| CTCTGACGGAAATCTTCACC+AGG | 0.567030 | 1.2:+76829407 | None:intergenic |
| AAACATGAAAAGGACGATGA+AGG | 0.570624 | 1.2:-76829324 | MS.gene34363:CDS |
| CAGATCTAACTAGGAAAGGA+GGG | 0.570663 | 1.2:-76829082 | MS.gene34363:CDS |
| AAGTCAGATCTAACTAGGAA+AGG | 0.571577 | 1.2:-76829086 | MS.gene34363:CDS |
| AGCCGTAAATGTGTCTCCAT+TGG | 0.572557 | 1.2:+76829470 | None:intergenic |
| ATAGCAATCAAATTAAAAGA+GGG | 0.573972 | 1.2:-76830302 | MS.gene34363:CDS |
| CATGCATGAGTTGAATCTGT+TGG | 0.576261 | 1.2:+76830690 | None:intergenic |
| TCAGATCTAACTAGGAAAGG+AGG | 0.580562 | 1.2:-76829083 | MS.gene34363:CDS |
| CAAGCAAGAACCAGATGGTA+CGG | 0.582545 | 1.2:-76830592 | MS.gene34363:CDS |
| AGTATACAGATGAGCTGTCA+AGG | 0.583545 | 1.2:-76829749 | MS.gene34363:CDS |
| CAGCAATGGCCATAATGCCC+AGG | 0.586105 | 1.2:-76839762 | MS.gene34363:intron |
| TTGCTATTACTGGTAGATTG+TGG | 0.588055 | 1.2:+76830456 | None:intergenic |
| GACGCTGAACTCACTTGGCA+TGG | 0.589852 | 1.2:-76830936 | MS.gene34363:CDS |
| GGCGTTGAAAATGGAAGTGA+TGG | 0.590764 | 1.2:-76841429 | None:intergenic |
| CAACAGATTCAACTCATGCA+TGG | 0.591788 | 1.2:-76830689 | MS.gene34363:CDS |
| AAATCCTGAACTTTCATCTG+AGG | 0.591883 | 1.2:-76830745 | MS.gene34363:CDS |
| GGTGGAACATTTATTCGGGA+AGG | 0.592387 | 1.2:-76830534 | MS.gene34363:CDS |
| ACATCGAGTGATGTGAAAAG+AGG | 0.592896 | 1.2:+76830908 | None:intergenic |
| TCCAAGCAATCAATAAGTCT+AGG | 0.595558 | 1.2:+76840282 | None:intergenic |
| ACGATGAAGGTGCATAGGAA+AGG | 0.596875 | 1.2:-76829311 | MS.gene34363:CDS |
| CAACAGACAGAAATCAAGCA+CGG | 0.597880 | 1.2:-76830353 | MS.gene34363:CDS |
| AAAGGACGATGAAGGTGCAT+AGG | 0.604624 | 1.2:-76829316 | MS.gene34363:CDS |
| TCTGACCACAATTTGAGGTG+AGG | 0.607327 | 1.2:+76828519 | None:intergenic |
| TAAGGAAGAAATGAATCGGT+GGG | 0.610462 | 1.2:-76841375 | MS.gene34363:CDS |
| ACTTTAGGAACAAATGCAGG+TGG | 0.611184 | 1.2:+76828559 | None:intergenic |
| TCCCCAAGTTGTAAATGTGA+AGG | 0.615749 | 1.2:-76828220 | MS.gene34363:CDS |
| GGTGCGAAAATATACATGGT+AGG | 0.616427 | 1.2:-76828198 | MS.gene34363:CDS |
| AATTAAAAGAGGGGATGATG+AGG | 0.619868 | 1.2:-76830292 | MS.gene34363:intron |
| TGTATCAGCACTATCAGCAA+TGG | 0.619905 | 1.2:-76839776 | MS.gene34363:CDS |
| GTCACAGATGTAGTTGAAGG+TGG | 0.621901 | 1.2:-76830552 | MS.gene34363:CDS |
| TTAAGGAAGAAATGAATCGG+TGG | 0.622498 | 1.2:-76841376 | MS.gene34363:CDS |
| AGGAATGTGAACTGATGACT+TGG | 0.627401 | 1.2:+76829427 | None:intergenic |
| TTTAAAGAATAAGTGCAGCT+CGG | 0.628487 | 1.2:+76829536 | None:intergenic |
| TAGCAATCAAATTAAAAGAG+GGG | 0.632633 | 1.2:-76830301 | MS.gene34363:CDS |
| CTGAGATGACCAGTATGCAA+AGG | 0.633227 | 1.2:-76829718 | MS.gene34363:CDS |
| ACTGGTAGATTGTGGTAACA+GGG | 0.636581 | 1.2:+76830464 | None:intergenic |
| TCTGTCACAGATGTAGTTGA+AGG | 0.639278 | 1.2:-76830555 | MS.gene34363:CDS |
| AGATCTAACTAGGAAAGGAG+GGG | 0.643115 | 1.2:-76829081 | MS.gene34363:CDS |
| GAAGGGTGCGAAAATATACA+TGG | 0.643125 | 1.2:-76828202 | MS.gene34363:CDS |
| CTTTAGGAACAAATGCAGGT+GGG | 0.643291 | 1.2:+76828560 | None:intergenic |
| GGTACTCTAAACTGTGTCAG+TGG | 0.644148 | 1.2:-76841139 | MS.gene34363:CDS |
| CTTGGCAAGCAAGAACCAGA+TGG | 0.652633 | 1.2:-76830597 | MS.gene34363:CDS |
| AAGCAGTCTTGACATGAGCA+AGG | 0.654291 | 1.2:+76828643 | None:intergenic |
| AAAGGAGCAACTCTGATGAG+AGG | 0.655315 | 1.2:-76829700 | MS.gene34363:CDS |
| CCCCAAGTTGTAAATGTGAA+GGG | 0.657560 | 1.2:-76828219 | MS.gene34363:CDS |
| TGAACCTAATCTCCGTACTG+AGG | 0.685003 | 1.2:-76833171 | MS.gene34363:CDS |
| CCAGCCTTAAATCATTACGA+AGG | 0.687773 | 1.2:-76829602 | MS.gene34363:CDS |
| ACGAGTCCATATTCCTCACG+AGG | 0.713943 | 1.2:-76830874 | MS.gene34363:intron |
| GGTATGCAAGAATTTCAGTG+TGG | 0.772592 | 1.2:-76833146 | MS.gene34363:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 76827945 | 76841441 | 76827945 | ID=MS.gene34363 |
| chr1.2 | mRNA | 76827945 | 76841441 | 76827945 | ID=MS.gene34363.t1;Parent=MS.gene34363 |
| chr1.2 | exon | 76841310 | 76841441 | 76841310 | ID=MS.gene34363.t1.exon1;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76841310 | 76841441 | 76841310 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76841067 | 76841185 | 76841067 | ID=MS.gene34363.t1.exon2;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76841067 | 76841185 | 76841067 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76840246 | 76840425 | 76840246 | ID=MS.gene34363.t1.exon3;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76840246 | 76840425 | 76840246 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76839763 | 76839819 | 76839763 | ID=MS.gene34363.t1.exon4;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76839763 | 76839819 | 76839763 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76833113 | 76833226 | 76833113 | ID=MS.gene34363.t1.exon5;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76833113 | 76833226 | 76833113 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76830875 | 76831057 | 76830875 | ID=MS.gene34363.t1.exon6;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76830875 | 76831057 | 76830875 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76830293 | 76830788 | 76830293 | ID=MS.gene34363.t1.exon7;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76830293 | 76830788 | 76830293 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76829218 | 76829789 | 76829218 | ID=MS.gene34363.t1.exon8;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76829218 | 76829789 | 76829218 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76829038 | 76829112 | 76829038 | ID=MS.gene34363.t1.exon9;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76829038 | 76829112 | 76829038 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76828525 | 76828705 | 76828525 | ID=MS.gene34363.t1.exon10;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76828525 | 76828705 | 76828525 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76828342 | 76828440 | 76828342 | ID=MS.gene34363.t1.exon11;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76828342 | 76828440 | 76828342 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76828128 | 76828257 | 76828128 | ID=MS.gene34363.t1.exon12;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76828128 | 76828257 | 76828128 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| chr1.2 | exon | 76827945 | 76827967 | 76827945 | ID=MS.gene34363.t1.exon13;Parent=MS.gene34363.t1 |
| chr1.2 | CDS | 76827945 | 76827967 | 76827945 | ID=cds.MS.gene34363.t1;Parent=MS.gene34363.t1 |
| Gene Sequence |
| Protein sequence |