Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34382.t1 | AKN91693.1 | 100 | 330 | 0 | 0 | 1 | 330 | 1 | 330 | 1.10E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34382.t1 | Q7XA73 | 38.9 | 339 | 152 | 6 | 10 | 327 | 9 | 313 | 1.1e-48 | 195.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34382.t1 | A0A186XM88 | 100.0 | 330 | 0 | 0 | 1 | 330 | 1 | 330 | 7.7e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene34382.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34382.t1 | MTR_1g102900 | 96.970 | 330 | 10 | 0 | 1 | 330 | 1 | 330 | 0.0 | 662 |
| MS.gene34382.t1 | MTR_1g102900 | 96.364 | 330 | 10 | 1 | 1 | 330 | 1 | 328 | 0.0 | 654 |
| MS.gene34382.t1 | MTR_1g102900 | 95.732 | 328 | 12 | 1 | 1 | 328 | 1 | 326 | 0.0 | 646 |
| MS.gene34382.t1 | MTR_1g102900 | 96.484 | 256 | 9 | 0 | 1 | 256 | 1 | 256 | 0.0 | 517 |
| MS.gene34382.t1 | MTR_1g102900 | 96.154 | 234 | 9 | 0 | 1 | 234 | 1 | 234 | 2.87e-170 | 473 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34382.t1 | AT4G14720 | 43.648 | 307 | 123 | 6 | 1 | 285 | 1 | 279 | 9.04e-69 | 218 |
| MS.gene34382.t1 | AT4G14720 | 43.648 | 307 | 123 | 6 | 1 | 285 | 1 | 279 | 1.89e-68 | 217 |
| MS.gene34382.t1 | AT4G14713 | 43.098 | 297 | 121 | 5 | 10 | 285 | 9 | 278 | 1.02e-66 | 212 |
| MS.gene34382.t1 | AT4G14713 | 43.657 | 268 | 103 | 5 | 10 | 256 | 9 | 249 | 1.34e-58 | 189 |
| MS.gene34382.t1 | AT4G14713 | 39.919 | 248 | 101 | 5 | 10 | 236 | 9 | 229 | 5.78e-45 | 154 |
| MS.gene34382.t1 | AT4G14713 | 45.050 | 202 | 77 | 5 | 10 | 190 | 9 | 197 | 4.51e-42 | 145 |
| MS.gene34382.t1 | AT4G14713 | 45.050 | 202 | 77 | 5 | 10 | 190 | 9 | 197 | 4.51e-42 | 145 |
Find 103 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTGATTTGAATGATAA+AGG | 0.266889 | 1.2:-76585451 | MS.gene34382:intron |
| CAGGGATGCGCAGGCCTTCC+TGG | 0.302807 | 1.2:-76589973 | MS.gene34382:CDS |
| TGGAATACCCTCTGCATTAC+AGG | 0.304356 | 1.2:-76586890 | MS.gene34382:CDS |
| TCAACCTCCGCCGAAGGCTT+TGG | 0.326869 | 1.2:-76589819 | MS.gene34382:CDS |
| CGCAGATTCCTCAAAGATAA+AGG | 0.351475 | 1.2:-76590274 | MS.gene34382:intron |
| GAGGTTGAGGAGGGTGGTGG+TGG | 0.353896 | 1.2:+76589834 | None:intergenic |
| ACCTTTATCATTCAAATCAA+TGG | 0.357456 | 1.2:+76585450 | None:intergenic |
| AAGAGGACTTCTTTATCAAT+AGG | 0.361087 | 1.2:+76588167 | None:intergenic |
| TGCACACCTAGTGGGTCATT+TGG | 0.371549 | 1.2:-76588443 | MS.gene34382:CDS |
| GAGGAGGGTGGTGGTGGTGA+TGG | 0.372920 | 1.2:+76589840 | None:intergenic |
| GATCGCCTGTGATTTGTTCC+AGG | 0.376842 | 1.2:+76589955 | None:intergenic |
| GTTAACAACGTTGGCATCAT+TGG | 0.378467 | 1.2:+76589730 | None:intergenic |
| TCCGTGGGTCTTTCAGAAAC+AGG | 0.382345 | 1.2:+76589755 | None:intergenic |
| GCACACCTAGTGGGTCATTT+GGG | 0.393611 | 1.2:-76588442 | MS.gene34382:CDS |
| GTGGTGGTGATGGCGGTGAA+TGG | 0.397278 | 1.2:+76589850 | None:intergenic |
| GTGAAGCTCCATGCCTCAAA+TGG | 0.403278 | 1.2:-76585568 | MS.gene34382:CDS |
| ACATCTTTACCCACCTTATC+CGG | 0.403564 | 1.2:+76588368 | None:intergenic |
| TACCTGTTTGAGCGACTTGA+AGG | 0.408154 | 1.2:+76588126 | None:intergenic |
| TCAATGGGAAGGGTAACTTT+TGG | 0.411767 | 1.2:+76585466 | None:intergenic |
| GCGGAGGTTGAGGAGGGTGG+TGG | 0.414332 | 1.2:+76589831 | None:intergenic |
| AAGGTCCAAAGCAGTATCTT+CGG | 0.420329 | 1.2:+76589793 | None:intergenic |
| TGATGGAGTTTCGCCGGATA+AGG | 0.423382 | 1.2:-76588381 | MS.gene34382:intron |
| TTTGAGGCATGGAGCTTCAC+TGG | 0.425496 | 1.2:+76585571 | None:intergenic |
| TATAAAAGATGTAGAGGGTC+AGG | 0.427753 | 1.2:-76585826 | MS.gene34382:intron |
| GGATCCCGAAGATACTGCTT+TGG | 0.428308 | 1.2:-76589798 | MS.gene34382:CDS |
| ACGACTTGAATTCCCATTTG+AGG | 0.447514 | 1.2:+76585555 | None:intergenic |
| ATCCTTCAAGTCGCTCAAAC+AGG | 0.448349 | 1.2:-76588128 | MS.gene34382:intron |
| AGTTGTTACCTTTATCTTTG+AGG | 0.457102 | 1.2:+76590266 | None:intergenic |
| AAAGCCTTCGGCGGAGGTTG+AGG | 0.462001 | 1.2:+76589821 | None:intergenic |
| GAGGGTGGTGGTGGTGATGG+CGG | 0.465413 | 1.2:+76589843 | None:intergenic |
| GCCAACGTTGTTAACCCTCC+CGG | 0.470865 | 1.2:-76589722 | MS.gene34382:CDS |
| CCTTTATCATTCAAATCAAT+GGG | 0.472367 | 1.2:+76585451 | None:intergenic |
| TGAAGGATTGTTGTGTCAGT+AGG | 0.473687 | 1.2:+76588143 | None:intergenic |
| TTTATTTGAAGGATTATCCT+GGG | 0.483950 | 1.2:+76588223 | None:intergenic |
| GGATCCAAAGCCTTCGGCGG+AGG | 0.495977 | 1.2:+76589815 | None:intergenic |
| GCCTTCGGCGGAGGTTGAGG+AGG | 0.498126 | 1.2:+76589824 | None:intergenic |
| GGAAGCACAACTCGTGATGC+TGG | 0.504564 | 1.2:-76586861 | MS.gene34382:intron |
| CTTTGAGAGAAATCACCTGC+TGG | 0.508162 | 1.2:+76589933 | None:intergenic |
| CTGGAAACTAGAGGCAGTCT+AGG | 0.512274 | 1.2:+76585508 | None:intergenic |
| AGGTCCAAAGCAGTATCTTC+GGG | 0.513512 | 1.2:+76589794 | None:intergenic |
| TATCATTCAAATCAATGGGA+AGG | 0.514085 | 1.2:+76585455 | None:intergenic |
| CCCTCCTCAACCTCCGCCGA+AGG | 0.515746 | 1.2:-76589825 | MS.gene34382:CDS |
| AAATGTCATCTTCAGTGAGT+TGG | 0.516724 | 1.2:+76590320 | None:intergenic |
| TTGAATTCCCATTTGAGGCA+TGG | 0.517522 | 1.2:+76585560 | None:intergenic |
| GTTGGCATCATTGGTTTCCG+TGG | 0.522851 | 1.2:+76589739 | None:intergenic |
| GTGATGGCGGTGAATGGCGG+AGG | 0.524011 | 1.2:+76589856 | None:intergenic |
| TCTTCAGTGAGTTGGTTAAG+AGG | 0.524819 | 1.2:+76590328 | None:intergenic |
| ACACCAACGCCGACGGTAGC+CGG | 0.528495 | 1.2:+76589881 | None:intergenic |
| TGAAGCTCCATGCCTCAAAT+GGG | 0.529697 | 1.2:-76585567 | MS.gene34382:CDS |
| TCGGCGGAGGTTGAGGAGGG+TGG | 0.532423 | 1.2:+76589828 | None:intergenic |
| AGGCATGGAGCTTCACTGGA+AGG | 0.532614 | 1.2:+76585575 | None:intergenic |
| CCTCTGCATTACAGGGAGAA+AGG | 0.534355 | 1.2:-76586882 | MS.gene34382:CDS |
| TCTTCGGGATCCAAAGCCTT+CGG | 0.534680 | 1.2:+76589809 | None:intergenic |
| GTGGTGATGGCGGTGAATGG+CGG | 0.537319 | 1.2:+76589853 | None:intergenic |
| CTTTCTCCCTGTAATGCAGA+GGG | 0.537471 | 1.2:+76586883 | None:intergenic |
| ATCATTCAAATCAATGGGAA+GGG | 0.540719 | 1.2:+76585456 | None:intergenic |
| GAAGGATTGTTGTGTCAGTA+GGG | 0.541726 | 1.2:+76588144 | None:intergenic |
| TTATCCTGGGGAAAGGAGGA+TGG | 0.548308 | 1.2:+76588236 | None:intergenic |
| ATGTCCATCCTCCTTTCCCC+AGG | 0.553018 | 1.2:-76588240 | MS.gene34382:CDS |
| GTTAAGAGGTCTGTCGAGGA+TGG | 0.553244 | 1.2:+76590342 | None:intergenic |
| TGAAGGATTATCCTGGGGAA+AGG | 0.554218 | 1.2:+76588229 | None:intergenic |
| CAAATCACAGGCGATCCAGC+AGG | 0.554699 | 1.2:-76589948 | MS.gene34382:CDS |
| GAGGTCTGTCGAGGATGGAT+CGG | 0.562371 | 1.2:+76590347 | None:intergenic |
| CCTTTCTCCCTGTAATGCAG+AGG | 0.565241 | 1.2:+76586882 | None:intergenic |
| GCCTGTGATTTGTTCCAGGA+AGG | 0.565338 | 1.2:+76589959 | None:intergenic |
| CCAACGTTGTTAACCCTCCC+GGG | 0.565503 | 1.2:-76589721 | MS.gene34382:intron |
| TGTCTATGATGGAGTTTCGC+CGG | 0.565522 | 1.2:-76588387 | MS.gene34382:CDS |
| TTGGCATCATTGGTTTCCGT+GGG | 0.565795 | 1.2:+76589740 | None:intergenic |
| ACACCGGCTACCGTCGGCGT+TGG | 0.567567 | 1.2:-76589884 | MS.gene34382:CDS |
| GCCTTCCTGGAACAAATCAC+AGG | 0.567775 | 1.2:-76589960 | MS.gene34382:CDS |
| TTGTTGTGTCAGTAGGGAAG+AGG | 0.573992 | 1.2:+76588150 | None:intergenic |
| CCTTCGGCGGAGGTTGAGGA+GGG | 0.574219 | 1.2:+76589825 | None:intergenic |
| ACCTGTTTCTGAAAGACCCA+CGG | 0.575091 | 1.2:-76589756 | MS.gene34382:CDS |
| GAGGATGGATCGGAAGGAAA+CGG | 0.575789 | 1.2:+76590357 | None:intergenic |
| TCGAAGGGCAAGAAACTGAC+TGG | 0.582148 | 1.2:-76585631 | MS.gene34382:CDS |
| GTGTTCGTACAGGGATGCGC+AGG | 0.586574 | 1.2:-76589982 | MS.gene34382:intron |
| GGTAAGGTGAATGTCTATGA+TGG | 0.592087 | 1.2:-76588398 | MS.gene34382:CDS |
| CACAGAGGGTGCACACCTAG+TGG | 0.593532 | 1.2:-76588452 | MS.gene34382:intron |
| AGGATTATCCTGGGGAAAGG+AGG | 0.594141 | 1.2:+76588232 | None:intergenic |
| AGAGGCAGTCTAGGCTGTGG+TGG | 0.596317 | 1.2:+76585517 | None:intergenic |
| GGAATACCCTCTGCATTACA+GGG | 0.598431 | 1.2:-76586889 | MS.gene34382:CDS |
| CAGGTGAAGTAGATTTCTGA+AGG | 0.607611 | 1.2:+76589774 | None:intergenic |
| TTATCAATAGGTAAGTTGCA+AGG | 0.614238 | 1.2:+76588179 | None:intergenic |
| TCTGTCGAGGATGGATCGGA+AGG | 0.617863 | 1.2:+76590351 | None:intergenic |
| ACCTACTGACGATGATACAC+CGG | 0.620314 | 1.2:-76589900 | MS.gene34382:CDS |
| ACTAGAGGCAGTCTAGGCTG+TGG | 0.622722 | 1.2:+76585514 | None:intergenic |
| CCGGAATCGGAAACGATGAA+CGG | 0.630536 | 1.2:-76590388 | None:intergenic |
| GCGATATCTTGAAAAGCGAA+AGG | 0.632146 | 1.2:-76585781 | MS.gene34382:CDS |
| GGAGGAGACACCAACGCCGA+CGG | 0.632850 | 1.2:+76589874 | None:intergenic |
| AATGGAGAACAGACCCGGGA+GGG | 0.635558 | 1.2:+76589708 | None:intergenic |
| CCCGGGAGGGTTAACAACGT+TGG | 0.637856 | 1.2:+76589721 | None:intergenic |
| AGACTGCCTCTAGTTTCCAG+TGG | 0.639013 | 1.2:-76585505 | MS.gene34382:CDS |
| GATGATACACCGGCTACCGT+CGG | 0.644121 | 1.2:-76589890 | MS.gene34382:CDS |
| ATCTTGAAAAGCGAAAGGAC+AGG | 0.644523 | 1.2:-76585776 | MS.gene34382:intron |
| ACAGAGGGTGCACACCTAGT+GGG | 0.649773 | 1.2:-76588451 | MS.gene34382:intron |
| TCGGGATCCAAAGCCTTCGG+CGG | 0.652180 | 1.2:+76589812 | None:intergenic |
| ATTTGCCCAAATGACCCACT+AGG | 0.656723 | 1.2:+76588437 | None:intergenic |
| TTATTTGAAGGATTATCCTG+GGG | 0.659271 | 1.2:+76588224 | None:intergenic |
| GCCGGTGTATCATCGTCAGT+AGG | 0.662569 | 1.2:+76589899 | None:intergenic |
| GCTGAGCCACTGGAAACTAG+AGG | 0.668085 | 1.2:+76585499 | None:intergenic |
| GTTGGTTAAGAGGTCTGTCG+AGG | 0.685077 | 1.2:+76590338 | None:intergenic |
| AAATGGAGAACAGACCCGGG+AGG | 0.721352 | 1.2:+76589707 | None:intergenic |
| GAATCGGAAACGATGAACGG+CGG | 0.745087 | 1.2:-76590385 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAAAAATGAAATGA+TGG | - | chr1.2:76585388-76585407 | MS.gene34382:intron | 10.0% |
| !!! | TATCTAAAGTAATAATTAAA+TGG | + | chr1.2:76585913-76585932 | None:intergenic | 10.0% |
| !!! | TTATTTATTTGTTTAGAATT+AGG | - | chr1.2:76585540-76585559 | MS.gene34382:CDS | 10.0% |
| !!! | TTTAATAACATCTATATTTT+GGG | - | chr1.2:76585776-76585795 | MS.gene34382:intron | 10.0% |
| !! | AAAAAAACATGAAAGAAAAA+TGG | + | chr1.2:76585239-76585258 | None:intergenic | 15.0% |
| !! | AACCTAAAAATAATCATTTA+GGG | + | chr1.2:76585980-76585999 | None:intergenic | 15.0% |
| !! | AATTTAATACATACATCAAA+AGG | + | chr1.2:76588884-76588903 | None:intergenic | 15.0% |
| !! | ATAATTAACAAAACTAACAT+TGG | + | chr1.2:76586414-76586433 | None:intergenic | 15.0% |
| !! | TAAAATTAACAAACAAATGA+AGG | - | chr1.2:76589907-76589926 | MS.gene34382:CDS | 15.0% |
| !! | TAACCTAAAAATAATCATTT+AGG | + | chr1.2:76585981-76586000 | None:intergenic | 15.0% |
| !!! | AAGATTTTTAACTTCATAAT+TGG | - | chr1.2:76587996-76588015 | MS.gene34382:intron | 15.0% |
| !!! | ATGATCATTTTGTATATTAA+AGG | - | chr1.2:76586004-76586023 | MS.gene34382:intron | 15.0% |
| !!! | CTTTAATAACATCTATATTT+TGG | - | chr1.2:76585775-76585794 | MS.gene34382:intron | 15.0% |
| !!! | GTATTGATATTTATTGTTTA+GGG | - | chr1.2:76589643-76589662 | MS.gene34382:intron | 15.0% |
| !!! | GTTTAATTTTTTTTTTGTGT+TGG | - | chr1.2:76585267-76585286 | MS.gene34382:intron | 15.0% |
| !!! | TCATATTTAATTGTTGTTTA+CGG | - | chr1.2:76585819-76585838 | MS.gene34382:CDS | 15.0% |
| !!! | TGTATTGATATTTATTGTTT+AGG | - | chr1.2:76589642-76589661 | MS.gene34382:intron | 15.0% |
| !!! | TGTATTGTCTTTTTATATAT+AGG | + | chr1.2:76589688-76589707 | None:intergenic | 15.0% |
| !!! | TTTTGATGTATGTATTAAAT+TGG | - | chr1.2:76588883-76588902 | MS.gene34382:intron | 15.0% |
| !!! | TTTTTACTCGTTTAAAATTA+TGG | - | chr1.2:76587956-76587975 | MS.gene34382:intron | 15.0% |
| !! | AATAAATATTACCGATACTT+AGG | + | chr1.2:76589075-76589094 | None:intergenic | 20.0% |
| !! | AGAGTAATAAAATAATTCAG+CGG | + | chr1.2:76589258-76589277 | None:intergenic | 20.0% |
| !! | AGATAGTATATGCTAAAAAA+GGG | + | chr1.2:76589746-76589765 | None:intergenic | 20.0% |
| !! | ATACAAGTATGGTTAATTAT+TGG | + | chr1.2:76586631-76586650 | None:intergenic | 20.0% |
| !! | ATTCCTTAAAACTTAAAAAG+TGG | + | chr1.2:76589233-76589252 | None:intergenic | 20.0% |
| !! | ATTGGAGTAGAAAAATTAAA+TGG | + | chr1.2:76584810-76584829 | None:intergenic | 20.0% |
| !! | TAATTCAAAAAATCGGTATT+CGG | + | chr1.2:76587652-76587671 | None:intergenic | 20.0% |
| !! | TACAAGTATGGTTAATTATT+GGG | + | chr1.2:76586630-76586649 | None:intergenic | 20.0% |
| !! | TATTCAATTAACCTAAAAAG+TGG | + | chr1.2:76589793-76589812 | None:intergenic | 20.0% |
| !! | TATTGTCTAATATTCATCTA+CGG | + | chr1.2:76589988-76590007 | None:intergenic | 20.0% |
| !! | TCTCAAAGTATATTAATTAG+AGG | - | chr1.2:76589580-76589599 | MS.gene34382:intron | 20.0% |
| !! | TTGAATTATGCAAAAATCAT+TGG | - | chr1.2:76587736-76587755 | MS.gene34382:intron | 20.0% |
| !!! | AAAATGAAATTTGATAATGC+AGG | + | chr1.2:76587388-76587407 | None:intergenic | 20.0% |
| !!! | AAATGAAATTTGATAATGCA+GGG | + | chr1.2:76587387-76587406 | None:intergenic | 20.0% |
| !!! | AACCCTAAATGATTATTTTT+AGG | - | chr1.2:76585975-76585994 | MS.gene34382:intron | 20.0% |
| !!! | AATTGGTTTTACAGATAAAA+TGG | - | chr1.2:76588013-76588032 | MS.gene34382:intron | 20.0% |
| !!! | CTTTTACTTGTTTAAAATCA+TGG | - | chr1.2:76587853-76587872 | MS.gene34382:intron | 20.0% |
| !!! | GAGCTTTTAATTCAAAAAAT+CGG | + | chr1.2:76587659-76587678 | None:intergenic | 20.0% |
| !!! | TATTTGTTTAGAATTAGGTT+GGG | - | chr1.2:76585545-76585564 | MS.gene34382:CDS | 20.0% |
| !!! | TGATAGTGATTTATGTATTT+GGG | - | chr1.2:76588735-76588754 | MS.gene34382:intron | 20.0% |
| !!! | TGTTTTATAAAAGATGTAGA+GGG | - | chr1.2:76589095-76589114 | MS.gene34382:intron | 20.0% |
| !!! | TTACCACTTTTTAAGTTTTA+AGG | - | chr1.2:76589227-76589246 | MS.gene34382:intron | 20.0% |
| !!! | TTATTTGTTTAGAATTAGGT+TGG | - | chr1.2:76585544-76585563 | MS.gene34382:CDS | 20.0% |
| !!! | TTGATAGTGATTTATGTATT+TGG | - | chr1.2:76588734-76588753 | MS.gene34382:intron | 20.0% |
| !!! | TTGTTTTATAAAAGATGTAG+AGG | - | chr1.2:76589094-76589113 | MS.gene34382:intron | 20.0% |
| !!! | TTTGTTAATTTTACTTTCTC+TGG | + | chr1.2:76589900-76589919 | None:intergenic | 20.0% |
| !!! | TTTGTTATCTTTTGTTTCTT+GGG | - | chr1.2:76585311-76585330 | MS.gene34382:intron | 20.0% |
| ! | AAATAAAAATGCAGCAGTTT+GGG | - | chr1.2:76586719-76586738 | MS.gene34382:intron | 25.0% |
| ! | AAATTCCACATTAACAAAAC+TGG | + | chr1.2:76586124-76586143 | None:intergenic | 25.0% |
| ! | AACTTGTGATAAAAACAGAA+AGG | + | chr1.2:76587056-76587075 | None:intergenic | 25.0% |
| ! | AATATTTACAAGTTAGGAAC+TGG | - | chr1.2:76587877-76587896 | MS.gene34382:intron | 25.0% |
| ! | AATTATGAGAACCTAAGTAT+CGG | - | chr1.2:76589061-76589080 | MS.gene34382:intron | 25.0% |
| ! | ACATAAATCACTATCAATCT+CGG | + | chr1.2:76588731-76588750 | None:intergenic | 25.0% |
| ! | ACATGAATGATGGTTAAAAA+AGG | + | chr1.2:76588492-76588511 | None:intergenic | 25.0% |
| ! | ACCTTTATCATTCAAATCAA+TGG | + | chr1.2:76589479-76589498 | None:intergenic | 25.0% |
| ! | ATATTTACAAGTTAGGAACT+GGG | - | chr1.2:76587878-76587897 | MS.gene34382:intron | 25.0% |
| ! | ATGCTAAAAAAGGGTAAAAT+TGG | + | chr1.2:76589737-76589756 | None:intergenic | 25.0% |
| ! | CATTGAATAACTTATGTATC+TGG | + | chr1.2:76589843-76589862 | None:intergenic | 25.0% |
| ! | CCTTTATCATTCAAATCAAT+GGG | + | chr1.2:76589478-76589497 | None:intergenic | 25.0% |
| ! | CTAAAGTGTAAACCAATAAT+TGG | - | chr1.2:76590268-76590287 | MS.gene34382:intron | 25.0% |
| ! | CTATCAACAAATTATCTACT+TGG | + | chr1.2:76588174-76588193 | None:intergenic | 25.0% |
| ! | GAAATATGAAGAAATCTTGT+GGG | - | chr1.2:76588818-76588837 | MS.gene34382:intron | 25.0% |
| ! | GAGATAGTATATGCTAAAAA+AGG | + | chr1.2:76589747-76589766 | None:intergenic | 25.0% |
| ! | GAGTAATAAAATAATTCAGC+GGG | + | chr1.2:76589257-76589276 | None:intergenic | 25.0% |
| ! | GCATCAAGTAATAAATTGAA+TGG | + | chr1.2:76587014-76587033 | None:intergenic | 25.0% |
| ! | GGTGAAATTTAATTGATGTA+TGG | + | chr1.2:76586606-76586625 | None:intergenic | 25.0% |
| ! | TGAAATATGAAGAAATCTTG+TGG | - | chr1.2:76588817-76588836 | MS.gene34382:intron | 25.0% |
| ! | TTATTGAAAATAGGTGTTCT+AGG | + | chr1.2:76587347-76587366 | None:intergenic | 25.0% |
| ! | TTGTTGACCATTTCTATAAA+TGG | - | chr1.2:76587426-76587445 | MS.gene34382:intron | 25.0% |
| ! | TTTAGATATCATGTTTGAAG+TGG | - | chr1.2:76585925-76585944 | MS.gene34382:intron | 25.0% |
| ! | TTTATTTGAAGGATTATCCT+GGG | + | chr1.2:76586706-76586725 | None:intergenic | 25.0% |
| ! | TTTGTGTAAAATATGACTGA+AGG | - | chr1.2:76586384-76586403 | MS.gene34382:intron | 25.0% |
| !! | ATATAGAAAGTATGAAGCAT+TGG | + | chr1.2:76584828-76584847 | None:intergenic | 25.0% |
| !! | GAGTTGATTATAGCATAATT+TGG | - | chr1.2:76585486-76585505 | MS.gene34382:CDS | 25.0% |
| !! | TCTTTTAGCCAAGTAATATA+CGG | + | chr1.2:76588773-76588792 | None:intergenic | 25.0% |
| !! | TTAGATATCATGTTTGAAGT+GGG | - | chr1.2:76585926-76585945 | MS.gene34382:intron | 25.0% |
| !! | TTTATTACTCTGCCTTTTTA+GGG | - | chr1.2:76589267-76589286 | MS.gene34382:intron | 25.0% |
| !! | TTTTATCTTGTGTTCTCTTT+TGG | - | chr1.2:76588131-76588150 | MS.gene34382:CDS | 25.0% |
| !! | TTTTATTACTCTGCCTTTTT+AGG | - | chr1.2:76589266-76589285 | MS.gene34382:intron | 25.0% |
| !!! | AAGTGCAGTTTTTAGTTTAA+TGG | + | chr1.2:76586238-76586257 | None:intergenic | 25.0% |
| !!! | CAATGACTTGTTTAAAATCA+TGG | - | chr1.2:76587684-76587703 | MS.gene34382:intron | 25.0% |
| !!! | CTATTTTTCTACCTTAGTTT+TGG | - | chr1.2:76588431-76588450 | MS.gene34382:CDS | 25.0% |
| !!! | GTTTGTTATCTTTTGTTTCT+TGG | - | chr1.2:76585310-76585329 | MS.gene34382:intron | 25.0% |
| !!! | TCTAGATATTTGATAATGAC+AGG | + | chr1.2:76585746-76585765 | None:intergenic | 25.0% |
| !!! | TTTATAGCTTTATGTGAAGT+GGG | - | chr1.2:76585583-76585602 | MS.gene34382:CDS | 25.0% |
| !!! | TTTTATAGCTTTATGTGAAG+TGG | - | chr1.2:76585582-76585601 | MS.gene34382:CDS | 25.0% |
| !!! | TTTTATTTGAAGGATTATCC+TGG | + | chr1.2:76586707-76586726 | None:intergenic | 25.0% |
| !!! | TTTTTAGCATATACTATCTC+CGG | - | chr1.2:76589747-76589766 | MS.gene34382:CDS | 25.0% |
| !!! | TTTTTTCATGCATACTTTTC+TGG | - | chr1.2:76586893-76586912 | MS.gene34382:CDS | 25.0% |
| AAAACTATTGAACAGTGTAC+TGG | + | chr1.2:76590324-76590343 | None:intergenic | 30.0% | |
| AAATATCATCTGCTGTTAAC+TGG | + | chr1.2:76590235-76590254 | None:intergenic | 30.0% | |
| AAGAGGACTTCTTTATCAAT+AGG | + | chr1.2:76586762-76586781 | None:intergenic | 30.0% | |
| AAGTATGGTTAATTATTGGG+AGG | + | chr1.2:76586627-76586646 | None:intergenic | 30.0% | |
| AATTGTGCACAAATTGTCAA+CGG | + | chr1.2:76589936-76589955 | None:intergenic | 30.0% | |
| ACCAATGTTAAGAACTTGAA+TGG | + | chr1.2:76586437-76586456 | None:intergenic | 30.0% | |
| ACTAGATAAGATAGGAAACA+GGG | + | chr1.2:76588357-76588376 | None:intergenic | 30.0% | |
| ACTTAGGTTCTCATAATTTG+AGG | + | chr1.2:76589059-76589078 | None:intergenic | 30.0% | |
| AGCAGTAACTTTATAACACA+AGG | + | chr1.2:76588413-76588432 | None:intergenic | 30.0% | |
| AGTTGTTACCTTTATCTTTG+AGG | + | chr1.2:76584663-76584682 | None:intergenic | 30.0% | |
| ATCATTCAAATCAATGGGAA+GGG | + | chr1.2:76589473-76589492 | None:intergenic | 30.0% | |
| ATGCCAAGAAAGAAAAACAA+AGG | + | chr1.2:76588234-76588253 | None:intergenic | 30.0% | |
| ATTAAATGGAAGTTGTTCAC+AGG | + | chr1.2:76584796-76584815 | None:intergenic | 30.0% | |
| ATTGACATATATTGCAACAG+AGG | + | chr1.2:76588566-76588585 | None:intergenic | 30.0% | |
| CAAATAAAAATGCAGCAGTT+TGG | - | chr1.2:76586718-76586737 | MS.gene34382:intron | 30.0% | |
| CATAAATCACTATCAATCTC+GGG | + | chr1.2:76588730-76588749 | None:intergenic | 30.0% | |
| CATGACTTCAACAATGAATA+TGG | - | chr1.2:76586088-76586107 | MS.gene34382:intron | 30.0% | |
| CATGGCAATATTTACAAGTT+AGG | - | chr1.2:76587871-76587890 | MS.gene34382:intron | 30.0% | |
| CTGGTAATAATCTAGCAATA+AGG | + | chr1.2:76590305-76590324 | None:intergenic | 30.0% | |
| GAAGAAGAAAGAGAAAAAGA+AGG | + | chr1.2:76584688-76584707 | None:intergenic | 30.0% | |
| GAATTTCTTTCAGTTCCAAT+CGG | - | chr1.2:76586138-76586157 | MS.gene34382:intron | 30.0% | |
| GAGTGGATGGAAAATATTTA+GGG | - | chr1.2:76585665-76585684 | MS.gene34382:intron | 30.0% | |
| GGTATCCAAGCTAAAAAAAA+AGG | + | chr1.2:76586993-76587012 | None:intergenic | 30.0% | |
| GTTCGAGTCAAATATTAGAT+CGG | + | chr1.2:76587548-76587567 | None:intergenic | 30.0% | |
| TAAAATTATGGCATCTAGTC+AGG | - | chr1.2:76587968-76587987 | MS.gene34382:intron | 30.0% | |
| TAAATATCAATACAGCAAGC+AGG | + | chr1.2:76589636-76589655 | None:intergenic | 30.0% | |
| TAATAATCTAGCAATAAGGC+TGG | + | chr1.2:76590301-76590320 | None:intergenic | 30.0% | |
| TAATGTTTAGTGAGAGTGAA+GGG | - | chr1.2:76585451-76585470 | MS.gene34382:intron | 30.0% | |
| TATCATTCAAATCAATGGGA+AGG | + | chr1.2:76589474-76589493 | None:intergenic | 30.0% | |
| TGACTATTATTACTACCGAT+TGG | + | chr1.2:76586156-76586175 | None:intergenic | 30.0% | |
| TTAACCATACTTGTATTTGC+AGG | - | chr1.2:76586635-76586654 | MS.gene34382:intron | 30.0% | |
| TTACAGATGATTCCATTAAG+CGG | - | chr1.2:76588207-76588226 | MS.gene34382:CDS | 30.0% | |
| TTATCAATAGGTAAGTTGCA+AGG | + | chr1.2:76586750-76586769 | None:intergenic | 30.0% | |
| TTATTTGAAGGATTATCCTG+GGG | + | chr1.2:76586705-76586724 | None:intergenic | 30.0% | |
| TTGTTCATTTACTAGATGCA+TGG | + | chr1.2:76587928-76587947 | None:intergenic | 30.0% | |
| ! | AACTTCACAACTATGGTTTT+GGG | + | chr1.2:76590125-76590144 | None:intergenic | 30.0% |
| ! | AATGTGTGTTGATATATGGA+AGG | - | chr1.2:76585628-76585647 | MS.gene34382:CDS | 30.0% |
| ! | ACCTATTTTCAATAACCACA+CGG | - | chr1.2:76587352-76587371 | MS.gene34382:intron | 30.0% |
| ! | CAAATGACAATTTTCTACTG+TGG | - | chr1.2:76586507-76586526 | MS.gene34382:intron | 30.0% |
| ! | CTTTTAGCCAAGTAATATAC+GGG | + | chr1.2:76588772-76588791 | None:intergenic | 30.0% |
| ! | CTTTTTCCACTAGATAAGAT+AGG | + | chr1.2:76588365-76588384 | None:intergenic | 30.0% |
| ! | GATGAATGTGTGTTGATATA+TGG | - | chr1.2:76585624-76585643 | MS.gene34382:CDS | 30.0% |
| ! | TCCATTCAAGTTCTTAACAT+TGG | - | chr1.2:76586433-76586452 | MS.gene34382:intron | 30.0% |
| ! | TTATTACTCTGCCTTTTTAG+GGG | - | chr1.2:76589268-76589287 | MS.gene34382:intron | 30.0% |
| ! | TTGTTGCTTATAACAGTAAC+CGG | + | chr1.2:76589769-76589788 | None:intergenic | 30.0% |
| !! | ACTGCTGCATTTTTATTTGA+AGG | + | chr1.2:76586717-76586736 | None:intergenic | 30.0% |
| !! | CCCATTGATTTGAATGATAA+AGG | - | chr1.2:76589475-76589494 | MS.gene34382:intron | 30.0% |
| !! | TGGTTTTACAGATAAAATGG+TGG | - | chr1.2:76588016-76588035 | MS.gene34382:intron | 30.0% |
| !! | TTAGAATTAGGTTGGGAAAT+TGG | - | chr1.2:76585552-76585571 | MS.gene34382:CDS | 30.0% |
| !!! | AATTGCCAGTTTTGTTAATG+TGG | - | chr1.2:76586116-76586135 | MS.gene34382:intron | 30.0% |
| !!! | AATTGCTACTTTTAGAGTAC+AGG | - | chr1.2:76588522-76588541 | MS.gene34382:intron | 30.0% |
| !!! | TAAGCAACAAACCACTTTTT+AGG | - | chr1.2:76589779-76589798 | MS.gene34382:CDS | 30.0% |
| !!! | TGTAGCCTTTTTTTTTAGCT+TGG | - | chr1.2:76586985-76587004 | MS.gene34382:intron | 30.0% |
| AAATGTCATCTTCAGTGAGT+TGG | + | chr1.2:76584609-76584628 | None:intergenic | 35.0% | |
| AACACAGTAGAAATACAGAC+AGG | - | chr1.2:76590031-76590050 | MS.gene34382:intron | 35.0% | |
| AACTATCACAATCCAATGCT+TGG | - | chr1.2:76587310-76587329 | MS.gene34382:intron | 35.0% | |
| AAGATCACAATAGCATGACT+CGG | + | chr1.2:76588258-76588277 | None:intergenic | 35.0% | |
| AATGGAGAACTTCACAACTA+TGG | + | chr1.2:76590132-76590151 | None:intergenic | 35.0% | |
| ACAATTTGTGCACAATTCCT+TGG | - | chr1.2:76589939-76589958 | MS.gene34382:CDS | 35.0% | |
| ACAGCAGATGATATTTGTGA+TGG | - | chr1.2:76590239-76590258 | MS.gene34382:intron | 35.0% | |
| ACTATAGCAGTAGTGTATAG+AGG | - | chr1.2:76588855-76588874 | MS.gene34382:intron | 35.0% | |
| ACTTAAAAAGTGGTAACACG+AGG | + | chr1.2:76589223-76589242 | None:intergenic | 35.0% | |
| ATATTCATCTACGGTTGGAA+TGG | + | chr1.2:76589979-76589998 | None:intergenic | 35.0% | |
| ATGAGTACCTTCATATTGAC+TGG | + | chr1.2:76590078-76590097 | None:intergenic | 35.0% | |
| ATGCTATCAAGCTATCAAAC+TGG | + | chr1.2:76587523-76587542 | None:intergenic | 35.0% | |
| ATGGAAGCAAGAGATGTTAA+AGG | + | chr1.2:76586219-76586238 | None:intergenic | 35.0% | |
| ATGTTCACCCGTATATTACT+TGG | - | chr1.2:76588762-76588781 | MS.gene34382:intron | 35.0% | |
| CAAACAGGTAGTTAGCAATT+GGG | - | chr1.2:76586813-76586832 | MS.gene34382:intron | 35.0% | |
| CACTAGATAAGATAGGAAAC+AGG | + | chr1.2:76588358-76588377 | None:intergenic | 35.0% | |
| CATCCCAGTGATTTAAAAAC+CGG | + | chr1.2:76587601-76587620 | None:intergenic | 35.0% | |
| CATGGCAACATTTGTAAGTT+AGG | - | chr1.2:76587702-76587721 | MS.gene34382:intron | 35.0% | |
| CGCTTGACCATTTATAGAAA+TGG | + | chr1.2:76587436-76587455 | None:intergenic | 35.0% | |
| CTAATGTTTAGTGAGAGTGA+AGG | - | chr1.2:76585450-76585469 | MS.gene34382:intron | 35.0% | |
| CTGTTTCCTATCTTATCTAG+TGG | - | chr1.2:76588356-76588375 | MS.gene34382:intron | 35.0% | |
| CTTAAAAAGTGGTAACACGA+GGG | + | chr1.2:76589222-76589241 | None:intergenic | 35.0% | |
| GATAAATAAGCACTTGCAGA+AGG | - | chr1.2:76586943-76586962 | MS.gene34382:intron | 35.0% | |
| GGAGTGGATGGAAAATATTT+AGG | - | chr1.2:76585664-76585683 | MS.gene34382:intron | 35.0% | |
| GTCTAATATTCATCTACGGT+TGG | + | chr1.2:76589984-76590003 | None:intergenic | 35.0% | |
| TACAGATGATTCCATTAAGC+GGG | - | chr1.2:76588208-76588227 | MS.gene34382:CDS | 35.0% | |
| TATAAAAGATGTAGAGGGTC+AGG | - | chr1.2:76589100-76589119 | MS.gene34382:intron | 35.0% | |
| TCAAACAGGTAGTTAGCAAT+TGG | - | chr1.2:76586812-76586831 | MS.gene34382:intron | 35.0% | |
| TGAGATTGTCAGTACTTTGA+TGG | + | chr1.2:76585871-76585890 | None:intergenic | 35.0% | |
| TGTGACTATGTCAAAGTCAA+TGG | + | chr1.2:76587097-76587116 | None:intergenic | 35.0% | |
| TTACTGCAAGACATGAATGA+TGG | + | chr1.2:76588502-76588521 | None:intergenic | 35.0% | |
| TTATGCCATTCTTTGTTGGA+AGG | - | chr1.2:76586256-76586275 | MS.gene34382:intron | 35.0% | |
| TTTCTATAAATGGTCAAGCG+TGG | - | chr1.2:76587436-76587455 | MS.gene34382:intron | 35.0% | |
| ! | ACAGTAAGAATCTGCTACTT+AGG | + | chr1.2:76590200-76590219 | None:intergenic | 35.0% |
| ! | ACATGCATGGAATCTTTTGA+GGG | + | chr1.2:76588652-76588671 | None:intergenic | 35.0% |
| ! | ACGCATATTTTGTACATGCA+TGG | + | chr1.2:76588665-76588684 | None:intergenic | 35.0% |
| ! | AGTTTGATAGCTTGATAGCA+TGG | - | chr1.2:76587522-76587541 | MS.gene34382:intron | 35.0% |
| ! | CCTATTTTCAATAACCACAC+GGG | - | chr1.2:76587353-76587372 | MS.gene34382:intron | 35.0% |
| ! | GAACTTCACAACTATGGTTT+TGG | + | chr1.2:76590126-76590145 | None:intergenic | 35.0% |
| ! | GACAATTTTCTACTGTGGTA+AGG | - | chr1.2:76586512-76586531 | MS.gene34382:intron | 35.0% |
| ! | GGTTCTCATAATTTGAGGTA+TGG | + | chr1.2:76589054-76589073 | None:intergenic | 35.0% |
| ! | TACATGCATGGAATCTTTTG+AGG | + | chr1.2:76588653-76588672 | None:intergenic | 35.0% |
| ! | TTGAGCTTTTCTTTGTCACT+GGG | - | chr1.2:76585693-76585712 | MS.gene34382:intron | 35.0% |
| ! | TTTGAGCTTTTCTTTGTCAC+TGG | - | chr1.2:76585692-76585711 | MS.gene34382:intron | 35.0% |
| !! | AAGCCGGTTTTTAAATCACT+GGG | - | chr1.2:76587595-76587614 | MS.gene34382:intron | 35.0% |
| !! | CTGAAAAAAGTGTTGCGTTA+GGG | - | chr1.2:76586183-76586202 | MS.gene34382:intron | 35.0% |
| AAAAACAAAGGCCCGCTTAA+TGG | + | chr1.2:76588222-76588241 | None:intergenic | 40.0% | |
| AAATTTGATGCGAGCACAGA+GGG | - | chr1.2:76586460-76586479 | MS.gene34382:intron | 40.0% | |
| AAGCTCGTGAATTCCAAAGT+GGG | + | chr1.2:76588465-76588484 | None:intergenic | 40.0% | |
| AAGGTCCAAAGCAGTATCTT+CGG | + | chr1.2:76585136-76585155 | None:intergenic | 40.0% | |
| AATTGATCACGTGTCAGTAC+CGG | - | chr1.2:76588595-76588614 | MS.gene34382:intron | 40.0% | |
| ACATCTTTACCCACCTTATC+CGG | + | chr1.2:76586561-76586580 | None:intergenic | 40.0% | |
| ACGACTTGAATTCCCATTTG+AGG | + | chr1.2:76589374-76589393 | None:intergenic | 40.0% | |
| ACTGGGATGTATGTATTCTG+TGG | - | chr1.2:76585710-76585729 | MS.gene34382:intron | 40.0% | |
| AGAAAAATGGAGAACAGACC+CGG | + | chr1.2:76585226-76585245 | None:intergenic | 40.0% | |
| AGACTCCTTCCAACAAAGAA+TGG | + | chr1.2:76586264-76586283 | None:intergenic | 40.0% | |
| AGATCACAATAGCATGACTC+GGG | + | chr1.2:76588257-76588276 | None:intergenic | 40.0% | |
| AGGTATGGAAGCTTGATACA+GGG | + | chr1.2:76589039-76589058 | None:intergenic | 40.0% | |
| ATCGGTATTCGGAGTGAATT+TGG | + | chr1.2:76587641-76587660 | None:intergenic | 40.0% | |
| ATCTTGAAAAGCGAAAGGAC+AGG | - | chr1.2:76589150-76589169 | MS.gene34382:intron | 40.0% | |
| ATGGAAGGTGAATCTGTTTG+TGG | - | chr1.2:76585643-76585662 | MS.gene34382:intron | 40.0% | |
| ATTCTTTGTTGGAAGGAGTC+TGG | - | chr1.2:76586263-76586282 | MS.gene34382:intron | 40.0% | |
| CAGGTGAAGTAGATTTCTGA+AGG | + | chr1.2:76585155-76585174 | None:intergenic | 40.0% | |
| CAGTGATTTAAAAACCGGCT+TGG | + | chr1.2:76587596-76587615 | None:intergenic | 40.0% | |
| CCCGTGTGGTTATTGAAAAT+AGG | + | chr1.2:76587356-76587375 | None:intergenic | 40.0% | |
| CGCAGATTCCTCAAAGATAA+AGG | - | chr1.2:76584652-76584671 | MS.gene34382:intron | 40.0% | |
| CTTTCTGCCAGTCAATATGA+AGG | - | chr1.2:76590068-76590087 | MS.gene34382:intron | 40.0% | |
| GAAGGATTGTTGTGTCAGTA+GGG | + | chr1.2:76586785-76586804 | None:intergenic | 40.0% | |
| GATAGGAAACAGGGATCAAA+TGG | + | chr1.2:76588348-76588367 | None:intergenic | 40.0% | |
| GCACTTATGCCATTCTTTGT+TGG | - | chr1.2:76586252-76586271 | MS.gene34382:intron | 40.0% | |
| GCGATATCTTGAAAAGCGAA+AGG | - | chr1.2:76589145-76589164 | MS.gene34382:intron | 40.0% | |
| GCTAGATATCAACTGAGAGA+AGG | - | chr1.2:76585950-76585969 | MS.gene34382:intron | 40.0% | |
| GCTGGTGTATCACCAATTAT+TGG | + | chr1.2:76590283-76590302 | None:intergenic | 40.0% | |
| GGTAAGGTGAATGTCTATGA+TGG | - | chr1.2:76586528-76586547 | MS.gene34382:intron | 40.0% | |
| GTTAACAACGTTGGCATCAT+TGG | + | chr1.2:76585199-76585218 | None:intergenic | 40.0% | |
| GTTGAGCATGTTCATCTTCT+AGG | + | chr1.2:76587831-76587850 | None:intergenic | 40.0% | |
| TAAATTTGATGCGAGCACAG+AGG | - | chr1.2:76586459-76586478 | MS.gene34382:intron | 40.0% | |
| TAACTGCTGAATAGTAGCAC+CGG | + | chr1.2:76588617-76588636 | None:intergenic | 40.0% | |
| TCGGGTGAAAAAACACAACA+CGG | + | chr1.2:76588712-76588731 | None:intergenic | 40.0% | |
| TGAAGGATTGTTGTGTCAGT+AGG | + | chr1.2:76586786-76586805 | None:intergenic | 40.0% | |
| TGACTGTGTCAGTATCATTC+CGG | + | chr1.2:76585359-76585378 | None:intergenic | 40.0% | |
| TGGAACTACTATCGAAACCA+AGG | + | chr1.2:76589959-76589978 | None:intergenic | 40.0% | |
| TGGCAAGATATTCATGCAAG+AGG | + | chr1.2:76586586-76586605 | None:intergenic | 40.0% | |
| TTCTTTGTTGGAAGGAGTCT+GGG | - | chr1.2:76586264-76586283 | MS.gene34382:intron | 40.0% | |
| ! | AAATATACCAAGCGCTGTGT+TGG | - | chr1.2:76586049-76586068 | MS.gene34382:intron | 40.0% |
| ! | CATGCATGGAATCTTTTGAG+GGG | + | chr1.2:76588651-76588670 | None:intergenic | 40.0% |
| ! | GTGAAGTGGGAGATGATTTT+TGG | - | chr1.2:76585596-76585615 | MS.gene34382:CDS | 40.0% |
| ! | GTGCTACTATTCAGCAGTTA+CGG | - | chr1.2:76588617-76588636 | MS.gene34382:intron | 40.0% |
| ! | TCAATGGGAAGGGTAACTTT+TGG | + | chr1.2:76589463-76589482 | None:intergenic | 40.0% |
| ! | TTGAATTCCCATTTGAGGCA+TGG | + | chr1.2:76589369-76589388 | None:intergenic | 40.0% |
| ! | TTTTATCCTCTCATGCTCCA+TGG | - | chr1.2:76584761-76584780 | MS.gene34382:intron | 40.0% |
| !! | ATTTAAAAACCGGCTTGGAC+CGG | + | chr1.2:76587591-76587610 | None:intergenic | 40.0% |
| !! | CAAGCCGGTTTTTAAATCAC+TGG | - | chr1.2:76587594-76587613 | MS.gene34382:intron | 40.0% |
| !! | CAATCCAATGCTTGGTTTGT+TGG | - | chr1.2:76587318-76587337 | MS.gene34382:intron | 40.0% |
| !! | CCTGAAAAAAGTGTTGCGTT+AGG | - | chr1.2:76586182-76586201 | MS.gene34382:intron | 40.0% |
| !! | CTTTTTAGGGGAAGATCGAA+GGG | - | chr1.2:76589280-76589299 | MS.gene34382:intron | 40.0% |
| !! | TCTTCAGTGAGTTGGTTAAG+AGG | + | chr1.2:76584601-76584620 | None:intergenic | 40.0% |
| !!! | CCTAACGCAACACTTTTTTC+AGG | + | chr1.2:76586185-76586204 | None:intergenic | 40.0% |
| !!! | GGGCCTTTGTTTTTCTTTCT+TGG | - | chr1.2:76588228-76588247 | MS.gene34382:CDS | 40.0% |
| ACCTACTGACGATGATACAC+CGG | - | chr1.2:76585026-76585045 | MS.gene34382:intron | 45.0% | |
| ACTCGAACCGATTATCCCTT+CGG | - | chr1.2:76587560-76587579 | MS.gene34382:intron | 45.0% | |
| AGCTCGTGAATTCCAAAGTG+GGG | + | chr1.2:76588464-76588483 | None:intergenic | 45.0% | |
| AGGTCCAAAGCAGTATCTTC+GGG | + | chr1.2:76585135-76585154 | None:intergenic | 45.0% | |
| AGGTGAATCTGTTTGTGGAG+TGG | - | chr1.2:76585648-76585667 | MS.gene34382:intron | 45.0% | |
| ATCCTTCAAGTCGCTCAAAC+AGG | - | chr1.2:76586798-76586817 | MS.gene34382:intron | 45.0% | |
| ATTTGCCCAAATGACCCACT+AGG | + | chr1.2:76586492-76586511 | None:intergenic | 45.0% | |
| CATTAAACCAACACAGCGCT+TGG | + | chr1.2:76586059-76586078 | None:intergenic | 45.0% | |
| CCATTTGTGACAAGCAGCAA+AGG | - | chr1.2:76590147-76590166 | MS.gene34382:intron | 45.0% | |
| CCTTCGATCTTCCCCTAAAA+AGG | + | chr1.2:76589282-76589301 | None:intergenic | 45.0% | |
| CGGGTGAAAAAACACAACAC+GGG | + | chr1.2:76588711-76588730 | None:intergenic | 45.0% | |
| CGTGCCTGCAAATACAAGTA+TGG | + | chr1.2:76586642-76586661 | None:intergenic | 45.0% | |
| CTTTCTCCCTGTAATGCAGA+GGG | + | chr1.2:76588046-76588065 | None:intergenic | 45.0% | |
| GAAAAATGGAGAACAGACCC+GGG | + | chr1.2:76585225-76585244 | None:intergenic | 45.0% | |
| GAAGCTCGTGAATTCCAAAG+TGG | + | chr1.2:76588466-76588485 | None:intergenic | 45.0% | |
| GAATCTGTTTGTGGAGTGGA+TGG | - | chr1.2:76585652-76585671 | MS.gene34382:intron | 45.0% | |
| GAGGTATGGAAGCTTGATAC+AGG | + | chr1.2:76589040-76589059 | None:intergenic | 45.0% | |
| GATTATCCCTTCGGTTCAAC+CGG | - | chr1.2:76587569-76587588 | MS.gene34382:intron | 45.0% | |
| GGAATACCCTCTGCATTACA+GGG | - | chr1.2:76588037-76588056 | MS.gene34382:intron | 45.0% | |
| GGTTGAACCGAAGGGATAAT+CGG | + | chr1.2:76587570-76587589 | None:intergenic | 45.0% | |
| GTCACCAACAAACCAAGCAT+TGG | + | chr1.2:76587325-76587344 | None:intergenic | 45.0% | |
| TACCTGTTTGAGCGACTTGA+AGG | + | chr1.2:76586803-76586822 | None:intergenic | 45.0% | |
| TCATACCATCATGTCAGTGC+AGG | + | chr1.2:76588952-76588971 | None:intergenic | 45.0% | |
| TCGACGAACCCAGTATAAAC+CGG | + | chr1.2:76587493-76587512 | None:intergenic | 45.0% | |
| TCTTTGTTGGAAGGAGTCTG+GGG | - | chr1.2:76586265-76586284 | MS.gene34382:intron | 45.0% | |
| TGAAGCTCCATGCCTCAAAT+GGG | - | chr1.2:76589359-76589378 | MS.gene34382:intron | 45.0% | |
| TGAAGGATTATCCTGGGGAA+AGG | + | chr1.2:76586700-76586719 | None:intergenic | 45.0% | |
| TGGAATACCCTCTGCATTAC+AGG | - | chr1.2:76588036-76588055 | MS.gene34382:intron | 45.0% | |
| TGTCAGTATCATTCCGGTGT+CGG | + | chr1.2:76585353-76585372 | None:intergenic | 45.0% | |
| TTGTTGTGTCAGTAGGGAAG+AGG | + | chr1.2:76586779-76586798 | None:intergenic | 45.0% | |
| TTTGTGACAAGCAGCAAAGG+AGG | - | chr1.2:76590150-76590169 | MS.gene34382:intron | 45.0% | |
| ! | CCTTTGCTGCTTGTCACAAA+TGG | + | chr1.2:76590150-76590169 | None:intergenic | 45.0% |
| ! | CTTAACCTGCACTGACATGA+TGG | - | chr1.2:76588944-76588963 | MS.gene34382:intron | 45.0% |
| ! | CTTTGAGAGAAATCACCTGC+TGG | + | chr1.2:76584996-76585015 | None:intergenic | 45.0% |
| ! | TGTCTATGATGGAGTTTCGC+CGG | - | chr1.2:76586539-76586558 | MS.gene34382:intron | 45.0% |
| !! | ACCTGTTTCTGAAAGACCCA+CGG | - | chr1.2:76585170-76585189 | MS.gene34382:intron | 45.0% |
| !! | CCTTTTTAGGGGAAGATCGA+AGG | - | chr1.2:76589279-76589298 | MS.gene34382:intron | 45.0% |
| !! | TTGGCATCATTGGTTTCCGT+GGG | + | chr1.2:76585189-76585208 | None:intergenic | 45.0% |
| !! | TTAATGTAATTAAATTAATT+GGG | - | chr1.2:76584859-76584878 | MS.gene34382:intron | 5.0% |
| !! | TTTAATGTAATTAAATTAAT+TGG | - | chr1.2:76584858-76584877 | MS.gene34382:intron | 5.0% |
| !! | TTTATTGAATTTAAATTATT+TGG | + | chr1.2:76586364-76586383 | None:intergenic | 5.0% |
| AAGACGACACGTGTTCGTAC+AGG | - | chr1.2:76584934-76584953 | MS.gene34382:intron | 50.0% | |
| AGACGACACGTGTTCGTACA+GGG | - | chr1.2:76584935-76584954 | MS.gene34382:intron | 50.0% | |
| AGGATTATCCTGGGGAAAGG+AGG | + | chr1.2:76586697-76586716 | None:intergenic | 50.0% | |
| CAAGCAGCAAAGGAGGATCT+TGG | - | chr1.2:76590157-76590176 | MS.gene34382:intron | 50.0% | |
| CACAACACGGGTATGAGTAC+TGG | + | chr1.2:76588699-76588718 | None:intergenic | 50.0% | |
| CACAACTCGTGATGCTGGTA+GGG | - | chr1.2:76588070-76588089 | MS.gene34382:intron | 50.0% | |
| CCTCTGCATTACAGGGAGAA+AGG | - | chr1.2:76588044-76588063 | MS.gene34382:intron | 50.0% | |
| CCTTTCTCCCTGTAATGCAG+AGG | + | chr1.2:76588047-76588066 | None:intergenic | 50.0% | |
| CTCTCATGCTCCATGGTTTC+CGG | - | chr1.2:76584768-76584787 | MS.gene34382:intron | 50.0% | |
| CTGGAAACTAGAGGCAGTCT+AGG | + | chr1.2:76589421-76589440 | None:intergenic | 50.0% | |
| GAGGATGGATCGGAAGGAAA+CGG | + | chr1.2:76584572-76584591 | None:intergenic | 50.0% | |
| GCCTTCCTGGAACAAATCAC+AGG | - | chr1.2:76584966-76584985 | MS.gene34382:intron | 50.0% | |
| GGATCCCGAAGATACTGCTT+TGG | - | chr1.2:76585128-76585147 | MS.gene34382:intron | 50.0% | |
| GGGGCTGACATCCAAAACTA+AGG | + | chr1.2:76588445-76588464 | None:intergenic | 50.0% | |
| GGTTTATACTGGGTTCGTCG+AGG | - | chr1.2:76587492-76587511 | MS.gene34382:intron | 50.0% | |
| GTGAAGCTCCATGCCTCAAA+TGG | - | chr1.2:76589358-76589377 | MS.gene34382:intron | 50.0% | |
| GTTAAGAGGTCTGTCGAGGA+TGG | + | chr1.2:76584587-76584606 | None:intergenic | 50.0% | |
| GTTGGTTAAGAGGTCTGTCG+AGG | + | chr1.2:76584591-76584610 | None:intergenic | 50.0% | |
| TCCGTGGGTCTTTCAGAAAC+AGG | + | chr1.2:76585174-76585193 | None:intergenic | 50.0% | |
| TCGAAGGGCAAGAAACTGAC+TGG | - | chr1.2:76589295-76589314 | MS.gene34382:intron | 50.0% | |
| TCTTCGGGATCCAAAGCCTT+CGG | + | chr1.2:76585120-76585139 | None:intergenic | 50.0% | |
| TGATGGAGTTTCGCCGGATA+AGG | - | chr1.2:76586545-76586564 | MS.gene34382:intron | 50.0% | |
| TGGAAGTTGTTCACAGGAGC+CGG | + | chr1.2:76584790-76584809 | None:intergenic | 50.0% | |
| TTATCCTGGGGAAAGGAGGA+TGG | + | chr1.2:76586693-76586712 | None:intergenic | 50.0% | |
| TTTGGATGTCAGCCCCACTT+TGG | - | chr1.2:76588449-76588468 | MS.gene34382:CDS | 50.0% | |
| ! | AGACTGCCTCTAGTTTCCAG+TGG | - | chr1.2:76589421-76589440 | MS.gene34382:intron | 50.0% |
| ! | ATCATTCCGGTGTCGGAGTT+AGG | + | chr1.2:76585346-76585365 | None:intergenic | 50.0% |
| ! | GCACACCTAGTGGGTCATTT+GGG | - | chr1.2:76586484-76586503 | MS.gene34382:intron | 50.0% |
| ! | TCATTCCGGTGTCGGAGTTA+GGG | + | chr1.2:76585345-76585364 | None:intergenic | 50.0% |
| ! | TGCACACCTAGTGGGTCATT+TGG | - | chr1.2:76586483-76586502 | MS.gene34382:intron | 50.0% |
| ! | TGGGAAGGGTAACTTTTGGC+AGG | + | chr1.2:76589459-76589478 | None:intergenic | 50.0% |
| ! | TTTGAGGCATGGAGCTTCAC+TGG | + | chr1.2:76589358-76589377 | None:intergenic | 50.0% |
| !! | GATCGCCTGTGATTTGTTCC+AGG | + | chr1.2:76584974-76584993 | None:intergenic | 50.0% |
| !! | GCCTGTGATTTGTTCCAGGA+AGG | + | chr1.2:76584970-76584989 | None:intergenic | 50.0% |
| !! | GTTGGCATCATTGGTTTCCG+TGG | + | chr1.2:76585190-76585209 | None:intergenic | 50.0% |
| AAATGGAGAACAGACCCGGG+AGG | + | chr1.2:76585222-76585241 | None:intergenic | 55.0% | |
| AATGGAGAACAGACCCGGGA+GGG | + | chr1.2:76585221-76585240 | None:intergenic | 55.0% | |
| ACTAGAGGCAGTCTAGGCTG+TGG | + | chr1.2:76589415-76589434 | None:intergenic | 55.0% | |
| AGGCATGGAGCTTCACTGGA+AGG | + | chr1.2:76589354-76589373 | None:intergenic | 55.0% | |
| ATGTCCATCCTCCTTTCCCC+AGG | - | chr1.2:76586686-76586705 | MS.gene34382:intron | 55.0% | |
| CAAATCACAGGCGATCCAGC+AGG | - | chr1.2:76584978-76584997 | MS.gene34382:intron | 55.0% | |
| CCAACGTTGTTAACCCTCCC+GGG | - | chr1.2:76585205-76585224 | MS.gene34382:intron | 55.0% | |
| CCCAGTATAAACCGGCGACT+CGG | + | chr1.2:76587485-76587504 | None:intergenic | 55.0% | |
| CGAAACCCTAACTCCGACAC+CGG | - | chr1.2:76585337-76585356 | MS.gene34382:intron | 55.0% | |
| CGGAAACCATGGAGCATGAG+AGG | + | chr1.2:76584770-76584789 | None:intergenic | 55.0% | |
| CTTGGACCGGTTGAACCGAA+GGG | + | chr1.2:76587578-76587597 | None:intergenic | 55.0% | |
| GAGGTCTGTCGAGGATGGAT+CGG | + | chr1.2:76584582-76584601 | None:intergenic | 55.0% | |
| GCACAACTCGTGATGCTGGT+AGG | - | chr1.2:76588069-76588088 | MS.gene34382:intron | 55.0% | |
| GCCAACGTTGTTAACCCTCC+CGG | - | chr1.2:76585204-76585223 | MS.gene34382:intron | 55.0% | |
| GCCGGTGTATCATCGTCAGT+AGG | + | chr1.2:76585030-76585049 | None:intergenic | 55.0% | |
| GCTGAGCCACTGGAAACTAG+AGG | + | chr1.2:76589430-76589449 | None:intergenic | 55.0% | |
| GGAGTTTCGCCGGATAAGGT+GGG | - | chr1.2:76586549-76586568 | MS.gene34382:intron | 55.0% | |
| TAGGAAAACTGCCGAGTCGC+CGG | - | chr1.2:76587471-76587490 | MS.gene34382:intron | 55.0% | |
| TCTGTCGAGGATGGATCGGA+AGG | + | chr1.2:76584578-76584597 | None:intergenic | 55.0% | |
| TGGAGTTTCGCCGGATAAGG+TGG | - | chr1.2:76586548-76586567 | MS.gene34382:intron | 55.0% | |
| TTCACAGGAGCCGGAAACCA+TGG | + | chr1.2:76584781-76584800 | None:intergenic | 55.0% | |
| ! | ACAGAGGGTGCACACCTAGT+GGG | - | chr1.2:76586475-76586494 | MS.gene34382:intron | 55.0% |
| ! | CAGGTTTTCAGCTGAGCCAC+TGG | + | chr1.2:76589440-76589459 | None:intergenic | 55.0% |
| ! | GATGATACACCGGCTACCGT+CGG | - | chr1.2:76585036-76585055 | MS.gene34382:intron | 55.0% |
| ! | GGAAGCACAACTCGTGATGC+TGG | - | chr1.2:76588065-76588084 | MS.gene34382:intron | 55.0% |
| ! | TTGGAAGGAGTCTGGGGTAG+TGG | - | chr1.2:76586271-76586290 | MS.gene34382:intron | 55.0% |
| !! | CCGAGTCGCCGGTTTATACT+GGG | - | chr1.2:76587482-76587501 | MS.gene34382:intron | 55.0% |
| !!! | AGCGTGGCTCAGCTGGTTTT+AGG | - | chr1.2:76587452-76587471 | MS.gene34382:intron | 55.0% |
| AAAGCCTTCGGCGGAGGTTG+AGG | + | chr1.2:76585108-76585127 | None:intergenic | 60.0% | |
| AGAGGCAGTCTAGGCTGTGG+TGG | + | chr1.2:76589412-76589431 | None:intergenic | 60.0% | |
| ATGGTCAAGCGTGGCTCAGC+TGG | - | chr1.2:76587445-76587464 | MS.gene34382:intron | 60.0% | |
| CCCGGGAGGGTTAACAACGT+TGG | + | chr1.2:76585208-76585227 | None:intergenic | 60.0% | |
| GCAGGGATCTTACTCCCGTG+TGG | + | chr1.2:76587370-76587389 | None:intergenic | 60.0% | |
| GCTTGGACCGGTTGAACCGA+AGG | + | chr1.2:76587579-76587598 | None:intergenic | 60.0% | |
| GTGTTCGTACAGGGATGCGC+AGG | - | chr1.2:76584944-76584963 | MS.gene34382:intron | 60.0% | |
| TCAACCTCCGCCGAAGGCTT+TGG | - | chr1.2:76585107-76585126 | MS.gene34382:intron | 60.0% | |
| TCGGGATCCAAAGCCTTCGG+CGG | + | chr1.2:76585117-76585136 | None:intergenic | 60.0% | |
| TCGGTTCAACCGGTCCAAGC+CGG | - | chr1.2:76587579-76587598 | MS.gene34382:intron | 60.0% | |
| ! | CACAGAGGGTGCACACCTAG+TGG | - | chr1.2:76586474-76586493 | MS.gene34382:intron | 60.0% |
| !! | GCCGAGTCGCCGGTTTATAC+TGG | - | chr1.2:76587481-76587500 | MS.gene34382:intron | 60.0% |
| !! | GTGGTGATGGCGGTGAATGG+CGG | + | chr1.2:76585076-76585095 | None:intergenic | 60.0% |
| !! | GTGGTGGTGATGGCGGTGAA+TGG | + | chr1.2:76585079-76585098 | None:intergenic | 60.0% |
| ACACCAACGCCGACGGTAGC+CGG | + | chr1.2:76585048-76585067 | None:intergenic | 65.0% | |
| CCTTCGGCGGAGGTTGAGGA+GGG | + | chr1.2:76585104-76585123 | None:intergenic | 65.0% | |
| GGAGGAGACACCAACGCCGA+CGG | + | chr1.2:76585055-76585074 | None:intergenic | 65.0% | |
| GGATCCAAAGCCTTCGGCGG+AGG | + | chr1.2:76585114-76585133 | None:intergenic | 65.0% | |
| ! | GAGGTTGAGGAGGGTGGTGG+TGG | + | chr1.2:76585095-76585114 | None:intergenic | 65.0% |
| !! | GAGGAGGGTGGTGGTGGTGA+TGG | + | chr1.2:76585089-76585108 | None:intergenic | 65.0% |
| !! | GAGGGTGGTGGTGGTGATGG+CGG | + | chr1.2:76585086-76585105 | None:intergenic | 65.0% |
| !! | GTGATGGCGGTGAATGGCGG+AGG | + | chr1.2:76585073-76585092 | None:intergenic | 65.0% |
| CAGGGATGCGCAGGCCTTCC+TGG | - | chr1.2:76584953-76584972 | MS.gene34382:intron | 70.0% | |
| CCCTCCTCAACCTCCGCCGA+AGG | - | chr1.2:76585101-76585120 | MS.gene34382:intron | 70.0% | |
| GCCTTCGGCGGAGGTTGAGG+AGG | + | chr1.2:76585105-76585124 | None:intergenic | 70.0% | |
| GCGGAGGTTGAGGAGGGTGG+TGG | + | chr1.2:76585098-76585117 | None:intergenic | 70.0% | |
| TCGGCGGAGGTTGAGGAGGG+TGG | + | chr1.2:76585101-76585120 | None:intergenic | 70.0% | |
| ! | ACACCGGCTACCGTCGGCGT+TGG | - | chr1.2:76585042-76585061 | MS.gene34382:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 76584553 | 76590395 | 76584553 | ID=MS.gene34382 |
| chr1.2 | mRNA | 76584553 | 76590395 | 76584553 | ID=MS.gene34382.t1;Parent=MS.gene34382 |
| chr1.2 | exon | 76590275 | 76590395 | 76590275 | ID=MS.gene34382.t1.exon1;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76590275 | 76590395 | 76590275 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76589722 | 76589992 | 76589722 | ID=MS.gene34382.t1.exon2;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76589722 | 76589992 | 76589722 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76588382 | 76588469 | 76588382 | ID=MS.gene34382.t1.exon3;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76588382 | 76588469 | 76588382 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76588129 | 76588291 | 76588129 | ID=MS.gene34382.t1.exon4;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76588129 | 76588291 | 76588129 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76586862 | 76586921 | 76586862 | ID=MS.gene34382.t1.exon5;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76586862 | 76586921 | 76586862 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76585777 | 76585840 | 76585777 | ID=MS.gene34382.t1.exon6;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76585777 | 76585840 | 76585777 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76585452 | 76585660 | 76585452 | ID=MS.gene34382.t1.exon7;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76585452 | 76585660 | 76585452 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| chr1.2 | exon | 76584553 | 76584569 | 76584553 | ID=MS.gene34382.t1.exon8;Parent=MS.gene34382.t1 |
| chr1.2 | CDS | 76584553 | 76584569 | 76584553 | ID=cds.MS.gene34382.t1;Parent=MS.gene34382.t1 |
| Gene Sequence |
| Protein sequence |
