Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34569.t1 | RHN51757.1 | 94.6 | 755 | 41 | 0 | 1 | 755 | 15 | 769 | 0.00E+00 | 1396.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34569.t1 | Q9M2E8 | 49.0 | 765 | 358 | 13 | 1 | 751 | 57 | 803 | 1.4e-187 | 657.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34569.t1 | A0A072TS92 | 94.6 | 755 | 41 | 0 | 1 | 755 | 1 | 755 | 0.0e+00 | 1396.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene34569.t1 | TF | HB-HD-ZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34569.t1 | MTR_0198s0030 | 95.762 | 755 | 32 | 0 | 1 | 755 | 1 | 755 | 0.0 | 1446 |
MS.gene34569.t1 | MTR_1g101280 | 58.562 | 765 | 292 | 12 | 1 | 753 | 1 | 752 | 0.0 | 882 |
MS.gene34569.t1 | MTR_7g076080 | 52.618 | 764 | 308 | 18 | 9 | 751 | 44 | 774 | 0.0 | 784 |
MS.gene34569.t1 | MTR_8g432540 | 53.138 | 749 | 322 | 12 | 13 | 751 | 77 | 806 | 0.0 | 777 |
MS.gene34569.t1 | MTR_4g047800 | 44.340 | 742 | 362 | 14 | 21 | 751 | 28 | 729 | 0.0 | 607 |
MS.gene34569.t1 | MTR_2g088470 | 43.860 | 741 | 364 | 14 | 21 | 751 | 34 | 732 | 0.0 | 601 |
MS.gene34569.t1 | MTR_5g029320 | 40.921 | 738 | 400 | 16 | 28 | 751 | 63 | 778 | 0.0 | 546 |
MS.gene34569.t1 | MTR_6g477820 | 41.795 | 713 | 383 | 14 | 54 | 751 | 28 | 723 | 0.0 | 540 |
MS.gene34569.t1 | MTR_2g101720 | 38.669 | 706 | 361 | 11 | 59 | 751 | 143 | 789 | 4.91e-169 | 506 |
MS.gene34569.t1 | MTR_5g005600 | 38.778 | 704 | 378 | 13 | 62 | 751 | 52 | 716 | 1.61e-157 | 474 |
MS.gene34569.t1 | MTR_7g427710 | 38.115 | 711 | 342 | 20 | 54 | 752 | 15 | 639 | 9.61e-144 | 436 |
MS.gene34569.t1 | MTR_2g030570 | 31.600 | 750 | 433 | 17 | 26 | 751 | 2 | 695 | 3.36e-123 | 385 |
MS.gene34569.t1 | MTR_2g030600 | 31.720 | 744 | 433 | 18 | 26 | 751 | 2 | 688 | 4.57e-118 | 371 |
MS.gene34569.t1 | MTR_2g030660 | 31.241 | 733 | 398 | 24 | 38 | 751 | 2 | 647 | 4.70e-98 | 317 |
MS.gene34569.t1 | MTR_7g427690 | 37.150 | 393 | 222 | 10 | 236 | 620 | 39 | 414 | 5.54e-77 | 256 |
MS.gene34569.t1 | MTR_2g083350 | 29.112 | 529 | 320 | 10 | 262 | 752 | 21 | 532 | 3.66e-67 | 232 |
MS.gene34569.t1 | MTR_2g083330 | 28.652 | 534 | 313 | 10 | 262 | 752 | 18 | 526 | 4.55e-65 | 226 |
MS.gene34569.t1 | MTR_7g427700 | 34.756 | 328 | 144 | 7 | 54 | 374 | 15 | 279 | 2.21e-53 | 191 |
MS.gene34569.t1 | MTR_7g427700 | 42.683 | 164 | 80 | 5 | 591 | 752 | 281 | 432 | 2.67e-21 | 97.8 |
MS.gene34569.t1 | MTR_5g046040 | 42.714 | 199 | 107 | 4 | 26 | 218 | 2 | 199 | 5.87e-38 | 145 |
MS.gene34569.t1 | MTR_7g027265 | 47.500 | 120 | 63 | 0 | 55 | 174 | 17 | 136 | 5.38e-36 | 132 |
MS.gene34569.t1 | MTR_0653s0020 | 39.698 | 199 | 100 | 6 | 439 | 636 | 1 | 180 | 1.48e-35 | 134 |
MS.gene34569.t1 | MTR_2g030690 | 31.438 | 299 | 172 | 11 | 463 | 751 | 2 | 277 | 7.50e-30 | 120 |
MS.gene34569.t1 | MTR_1g105420 | 35.185 | 216 | 105 | 8 | 110 | 316 | 1 | 190 | 6.60e-27 | 109 |
MS.gene34569.t1 | MTR_6g027290 | 32.143 | 140 | 94 | 1 | 53 | 191 | 23 | 162 | 8.22e-19 | 85.1 |
MS.gene34569.t1 | MTR_7g027605 | 43.478 | 92 | 50 | 2 | 345 | 436 | 2 | 91 | 3.19e-17 | 77.8 |
MS.gene34569.t1 | MTR_2g451350 | 30.827 | 133 | 87 | 2 | 270 | 399 | 1 | 131 | 1.65e-15 | 74.3 |
MS.gene34569.t1 | MTR_0653s0010 | 42.500 | 120 | 60 | 3 | 634 | 751 | 2 | 114 | 1.82e-15 | 73.6 |
MS.gene34569.t1 | MTR_7g427670 | 37.895 | 95 | 45 | 2 | 109 | 200 | 32 | 115 | 6.02e-13 | 66.6 |
MS.gene34569.t1 | MTR_2g030720 | 28.889 | 135 | 84 | 2 | 44 | 178 | 7 | 129 | 3.44e-12 | 65.5 |
MS.gene34569.t1 | MTR_2g030700 | 27.206 | 136 | 90 | 2 | 44 | 179 | 7 | 133 | 3.68e-12 | 65.5 |
MS.gene34569.t1 | MTR_2g030680 | 26.471 | 136 | 91 | 2 | 44 | 179 | 7 | 133 | 7.52e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34569.t1 | AT4G00730 | 50.938 | 746 | 319 | 13 | 12 | 751 | 94 | 798 | 0.0 | 724 |
MS.gene34569.t1 | AT3G61150 | 50.135 | 742 | 339 | 13 | 23 | 751 | 80 | 803 | 0.0 | 721 |
MS.gene34569.t1 | AT5G52170 | 47.230 | 758 | 321 | 17 | 1 | 755 | 1 | 682 | 0.0 | 646 |
MS.gene34569.t1 | AT5G52170 | 47.230 | 758 | 321 | 17 | 1 | 755 | 1 | 682 | 0.0 | 646 |
MS.gene34569.t1 | AT5G52170 | 46.850 | 762 | 323 | 17 | 1 | 755 | 1 | 687 | 0.0 | 642 |
MS.gene34569.t1 | AT4G04890 | 45.046 | 757 | 351 | 16 | 15 | 751 | 24 | 735 | 0.0 | 632 |
MS.gene34569.t1 | AT4G04890 | 45.046 | 757 | 351 | 16 | 15 | 751 | 24 | 735 | 0.0 | 632 |
MS.gene34569.t1 | AT4G21750 | 44.706 | 765 | 366 | 15 | 15 | 752 | 24 | 758 | 0.0 | 617 |
MS.gene34569.t1 | AT4G21750 | 44.706 | 765 | 366 | 15 | 15 | 752 | 24 | 758 | 0.0 | 617 |
MS.gene34569.t1 | AT4G21750 | 44.706 | 765 | 366 | 15 | 15 | 752 | 24 | 758 | 0.0 | 617 |
MS.gene34569.t1 | AT4G21750 | 44.706 | 765 | 366 | 15 | 15 | 752 | 24 | 758 | 0.0 | 617 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 43.127 | 742 | 357 | 12 | 20 | 751 | 30 | 716 | 0.0 | 597 |
MS.gene34569.t1 | AT1G05230 | 42.857 | 742 | 357 | 12 | 20 | 751 | 30 | 714 | 0.0 | 591 |
MS.gene34569.t1 | AT1G73360 | 41.018 | 707 | 384 | 14 | 54 | 751 | 31 | 713 | 0.0 | 535 |
MS.gene34569.t1 | AT4G00730 | 52.784 | 485 | 202 | 7 | 12 | 496 | 94 | 551 | 4.04e-175 | 514 |
MS.gene34569.t1 | AT1G05230 | 44.118 | 612 | 294 | 10 | 20 | 621 | 30 | 603 | 1.42e-171 | 506 |
MS.gene34569.t1 | AT1G17920 | 37.379 | 725 | 398 | 14 | 38 | 751 | 2 | 681 | 9.65e-166 | 494 |
MS.gene34569.t1 | AT1G17920 | 37.379 | 725 | 398 | 14 | 38 | 751 | 2 | 681 | 9.65e-166 | 494 |
MS.gene34569.t1 | AT1G79840 | 37.762 | 715 | 360 | 14 | 54 | 753 | 42 | 686 | 1.55e-157 | 473 |
MS.gene34569.t1 | AT1G79840 | 37.762 | 715 | 360 | 14 | 54 | 753 | 42 | 686 | 1.55e-157 | 473 |
MS.gene34569.t1 | AT1G79840 | 37.762 | 715 | 360 | 14 | 54 | 753 | 100 | 744 | 7.05e-157 | 474 |
MS.gene34569.t1 | AT1G79840 | 37.762 | 715 | 360 | 14 | 54 | 753 | 129 | 773 | 3.38e-156 | 473 |
MS.gene34569.t1 | AT2G32370 | 36.141 | 736 | 396 | 11 | 31 | 749 | 40 | 718 | 6.60e-156 | 470 |
MS.gene34569.t1 | AT4G25530 | 36.200 | 721 | 383 | 15 | 42 | 751 | 28 | 682 | 9.82e-144 | 437 |
MS.gene34569.t1 | AT5G46880 | 36.039 | 727 | 420 | 15 | 48 | 752 | 104 | 807 | 5.21e-143 | 440 |
MS.gene34569.t1 | AT5G46880 | 36.039 | 727 | 420 | 15 | 48 | 752 | 104 | 807 | 5.21e-143 | 440 |
MS.gene34569.t1 | AT5G46880 | 36.039 | 727 | 420 | 15 | 48 | 752 | 104 | 807 | 5.21e-143 | 440 |
MS.gene34569.t1 | AT4G17710 | 35.933 | 718 | 355 | 17 | 46 | 751 | 79 | 703 | 4.65e-132 | 408 |
MS.gene34569.t1 | AT1G79840 | 37.478 | 579 | 289 | 12 | 54 | 617 | 100 | 620 | 1.67e-125 | 389 |
MS.gene34569.t1 | AT3G03260 | 31.924 | 733 | 408 | 17 | 52 | 751 | 20 | 694 | 4.11e-118 | 372 |
MS.gene34569.t1 | AT5G17320 | 32.661 | 744 | 440 | 24 | 34 | 751 | 7 | 715 | 1.53e-110 | 352 |
MS.gene34569.t1 | AT1G79840 | 38.085 | 449 | 214 | 9 | 54 | 494 | 100 | 492 | 9.13e-96 | 307 |
MS.gene34569.t1 | AT1G34650 | 30.704 | 710 | 445 | 19 | 62 | 751 | 23 | 705 | 1.07e-92 | 305 |
MS.gene34569.t1 | AT3G03260 | 31.227 | 554 | 326 | 11 | 52 | 587 | 20 | 536 | 1.41e-88 | 289 |
MS.gene34569.t1 | AT5G07260 | 25.220 | 567 | 330 | 20 | 120 | 681 | 9 | 486 | 5.34e-39 | 152 |
MS.gene34569.t1 | AT5G07260 | 25.132 | 569 | 333 | 20 | 120 | 681 | 9 | 491 | 9.14e-39 | 152 |
Find 212 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGTTCGAAGCCAGAATT+TGG | 0.202187 | 6.3:+53059308 | None:intergenic |
GCTTCCTTCTGGCTGTATTT+TGG | 0.205155 | 6.3:-53058419 | MS.gene34569:CDS |
TTCTTCTTCTTCTTGCTCTT+TGG | 0.214124 | 6.3:+53060498 | None:intergenic |
TCCTCTCTGGATTAAGAGTT+TGG | 0.239974 | 6.3:-53059066 | MS.gene34569:CDS |
TTTAACGATCCGAAACAAAA+TGG | 0.310819 | 6.3:-53058990 | MS.gene34569:CDS |
AATGTTGGAATGGGACTTAT+TGG | 0.311960 | 6.3:-53060639 | MS.gene34569:CDS |
TGCCAGACTGAAAGAGGAAT+TGG | 0.317670 | 6.3:-53059405 | MS.gene34569:CDS |
ATTGGAGAGAACTTTGATTC+TGG | 0.322529 | 6.3:-53060621 | MS.gene34569:CDS |
AGCAGCATGTCGGAGGCATT+TGG | 0.324222 | 6.3:-53058513 | MS.gene34569:CDS |
CGAACAAGCAAGTCAAGTTC+TGG | 0.326569 | 6.3:-53060027 | MS.gene34569:CDS |
GGACAACACTCTCATCATAT+TGG | 0.340934 | 6.3:+53057795 | None:intergenic |
TCGAAGCCAGAATTTGGATT+TGG | 0.350110 | 6.3:+53059314 | None:intergenic |
CCAAATTCTGGCTTCGAACT+TGG | 0.355973 | 6.3:-53059308 | MS.gene34569:CDS |
ACTATGCCAAATCCAAATTC+TGG | 0.358829 | 6.3:-53059320 | MS.gene34569:CDS |
TATTGTCGAACCGGCACTAA+TGG | 0.359494 | 6.3:+53058556 | None:intergenic |
TATCAGTCCATGAGTCTTGC+AGG | 0.361127 | 6.3:+53056703 | None:intergenic |
TGCGGTGGCCCAGCAATTCC+TGG | 0.366906 | 6.3:-53059467 | MS.gene34569:CDS |
GCTATGCTTATTGATCTTGC+AGG | 0.368676 | 6.3:-53059131 | MS.gene34569:CDS |
AACTTTGATTCTGGTTTGCT+TGG | 0.372370 | 6.3:-53060612 | MS.gene34569:CDS |
ATGTCGCTGCCGATGGGATT+TGG | 0.374806 | 6.3:-53059245 | MS.gene34569:CDS |
GGTGGATGCTTGCTGACATT+TGG | 0.378763 | 6.3:-53056486 | MS.gene34569:CDS |
TATCGTCCATTGGTTAATTC+CGG | 0.379223 | 6.3:-53057764 | MS.gene34569:CDS |
GCACACTCCTCAACAAATTC+AGG | 0.380093 | 6.3:-53060466 | MS.gene34569:CDS |
TCAGTTCTTTGCTTCTCATC+AGG | 0.381699 | 6.3:+53060073 | None:intergenic |
TTGATTCTGGTTTGCTTGGA+AGG | 0.384607 | 6.3:-53060608 | MS.gene34569:CDS |
GTTAATTCCGGCAATGCATT+TGG | 0.384755 | 6.3:-53057752 | MS.gene34569:CDS |
TTCTGGCTTCGAACTTGGTA+TGG | 0.384994 | 6.3:-53059303 | MS.gene34569:CDS |
TTACAATGCTGCAGGTTACT+TGG | 0.385903 | 6.3:-53057829 | MS.gene34569:intron |
ATTTGGATTTGGCATAGTTA+TGG | 0.388515 | 6.3:+53059325 | None:intergenic |
AGCTGTAAGAAGCTTCCTTC+TGG | 0.391319 | 6.3:-53058430 | MS.gene34569:CDS |
GAAAATTGTCCAGGAATTGC+TGG | 0.395809 | 6.3:+53059458 | None:intergenic |
ACCTTGACCCACAAGTTCTT+CGG | 0.397052 | 6.3:-53059371 | MS.gene34569:CDS |
ACTGTCGCCCATGTTACTAA+TGG | 0.400218 | 6.3:+53057319 | None:intergenic |
GGTATGGGAGACGGAGTTAT+GGG | 0.401823 | 6.3:-53059224 | MS.gene34569:CDS |
ATGAGCACCAAATGCATTGC+CGG | 0.408651 | 6.3:+53057745 | None:intergenic |
GACAACACTCTCATCATATT+GGG | 0.408834 | 6.3:+53057796 | None:intergenic |
GTCGGCCGTAATGCTGCTAA+TGG | 0.409360 | 6.3:-53058466 | MS.gene34569:CDS |
GCAGCATGTCGGAGGCATTT+GGG | 0.409865 | 6.3:-53058512 | MS.gene34569:CDS |
CCTTAGCAAGAAGCTTGGTT+TGG | 0.411168 | 6.3:-53060050 | MS.gene34569:CDS |
TGTTTCCATTAGCAGCATTA+CGG | 0.413443 | 6.3:+53058461 | None:intergenic |
TTTCTTGAATTAGACGCAAC+TGG | 0.414309 | 6.3:-53059588 | MS.gene34569:intron |
TGGTATGGGAGACGGAGTTA+TGG | 0.416058 | 6.3:-53059225 | MS.gene34569:CDS |
CTGGTTTGCTTGGAAGGTTG+AGG | 0.416343 | 6.3:-53060602 | MS.gene34569:CDS |
CTCAGCCGGATTCTCCTCTC+TGG | 0.420917 | 6.3:-53059079 | MS.gene34569:CDS |
CACCGGAGGACCACCAGCTT+AGG | 0.422085 | 6.3:-53059436 | MS.gene34569:CDS |
ACTGAAGCTACAAGACAAAC+TGG | 0.426102 | 6.3:-53058960 | MS.gene34569:CDS |
TGCATCTTTGATTCTCTGAA+TGG | 0.427477 | 6.3:+53056380 | None:intergenic |
GGAGCTTCGGCGCTACAATC+TGG | 0.428974 | 6.3:-53059203 | MS.gene34569:CDS |
GTTGACACTAAGAATAGAAA+TGG | 0.431047 | 6.3:+53057088 | None:intergenic |
ACCAATCGATTCACAATCCT+TGG | 0.431465 | 6.3:-53056655 | MS.gene34569:CDS |
AGCGACATGTTGAAATTGCT+TGG | 0.435381 | 6.3:+53059260 | None:intergenic |
AGAGGATGTCTGATTACTTC+TGG | 0.437722 | 6.3:-53057385 | MS.gene34569:CDS |
AGGAAAATGGAAGGAAATGT+TGG | 0.440111 | 6.3:-53060654 | None:intergenic |
ATGCATTTGGTGCTCATCGA+TGG | 0.444476 | 6.3:-53057739 | MS.gene34569:CDS |
ATGTTTCCATGTATGATTGC+TGG | 0.445315 | 6.3:-53058756 | MS.gene34569:CDS |
CAGTGGTGGAGAGTCTTCAT+TGG | 0.446749 | 6.3:-53056622 | MS.gene34569:CDS |
CTGTCGCCCATGTTACTAAT+GGG | 0.449407 | 6.3:+53057320 | None:intergenic |
AGAAGAAGAAGAAATATCAT+AGG | 0.449873 | 6.3:-53060488 | MS.gene34569:CDS |
GCCCAATTCCTCTTTCAGTC+TGG | 0.459513 | 6.3:+53059403 | None:intergenic |
TGGTTTGCTTGGAAGGTTGA+GGG | 0.460033 | 6.3:-53060601 | MS.gene34569:CDS |
GATGACTATGAAAGCAGGTC+TGG | 0.462930 | 6.3:-53060576 | MS.gene34569:CDS |
GTCATATCTAGTGGAATGAA+TGG | 0.463447 | 6.3:-53058717 | MS.gene34569:CDS |
TTCGACAATATAGCTTCCTC+AGG | 0.463726 | 6.3:-53058543 | MS.gene34569:CDS |
TGATCTTGCAGGAGCTGCTA+TGG | 0.468204 | 6.3:-53059120 | MS.gene34569:CDS |
ACCGGAGGACCACCAGCTTA+GGG | 0.470424 | 6.3:-53059435 | MS.gene34569:CDS |
CAAGGGAATCACACTTCCTC+TGG | 0.472197 | 6.3:+53057705 | None:intergenic |
GGATTCCGTTGCCTCGGCAA+AGG | 0.472456 | 6.3:-53057223 | MS.gene34569:CDS |
CTTTGCTTCTCATCAGGATG+TGG | 0.472677 | 6.3:+53060079 | None:intergenic |
TGTCGGAGGCATTTGGGTTG+TGG | 0.474116 | 6.3:-53058506 | MS.gene34569:CDS |
TTAATCCAGAGAGGAGAATC+CGG | 0.476039 | 6.3:+53059074 | None:intergenic |
GTCCTTCGAGTGCGTGCAAG+TGG | 0.478216 | 6.3:-53057352 | MS.gene34569:CDS |
ATGGGAAGGAATGGTGTTGT+TGG | 0.478257 | 6.3:-53059284 | MS.gene34569:CDS |
ACCCTAAGCTGGTGGTCCTC+CGG | 0.481325 | 6.3:+53059434 | None:intergenic |
ACGATGCTCGAAGTGGCATC+TGG | 0.481832 | 6.3:+53057269 | None:intergenic |
GATTCCGTTGCCTCGGCAAA+GGG | 0.482104 | 6.3:-53057222 | MS.gene34569:CDS |
GATTGCTGGAGCTTCAACCT+TGG | 0.482566 | 6.3:-53058742 | MS.gene34569:CDS |
ATTGCTAAAGGACAAGCTCT+TGG | 0.483173 | 6.3:-53057116 | MS.gene34569:CDS |
GACTGATAGCTCTGGCTCAA+TGG | 0.483493 | 6.3:-53056688 | MS.gene34569:CDS |
TACAATGCTGCAGGTTACTT+GGG | 0.485970 | 6.3:-53057828 | MS.gene34569:intron |
CGGTAGCGGCGGCAATGGCG+AGG | 0.488679 | 6.3:-53056520 | MS.gene34569:CDS |
ATGTCTGATTACTTCTGGTC+GGG | 0.491021 | 6.3:-53057380 | MS.gene34569:CDS |
TTTCTTACCATGTGGAGTCA+TGG | 0.491235 | 6.3:+53057427 | None:intergenic |
AGACGGAGTTATGGGAGCTT+CGG | 0.494120 | 6.3:-53059216 | MS.gene34569:CDS |
ATGGAAGGAAATGTTGGAAT+GGG | 0.496065 | 6.3:-53060648 | MS.gene34569:CDS |
CTCTGGATTAAGAGTTTGGA+TGG | 0.496804 | 6.3:-53059062 | MS.gene34569:CDS |
AGGAAGCTATATTGTCGAAC+CGG | 0.497244 | 6.3:+53058547 | None:intergenic |
CTCCTGCATTGGTCCACCAT+TGG | 0.497322 | 6.3:+53057148 | None:intergenic |
GCTGCCGATGGGATTTGGTA+TGG | 0.501037 | 6.3:-53059240 | MS.gene34569:CDS |
GTCTATACCTGCAAGACTCA+TGG | 0.502681 | 6.3:-53056710 | MS.gene34569:CDS |
TTTCAACATGTCGCTGCCGA+TGG | 0.503516 | 6.3:-53059252 | MS.gene34569:CDS |
TCCTCCGGTGAAAATTGTCC+AGG | 0.504749 | 6.3:+53059449 | None:intergenic |
GATCGGAAATAGTGCTCAGC+AGG | 0.505248 | 6.3:-53059159 | MS.gene34569:CDS |
TGAGAATATGATTCTGAGGC+AGG | 0.505324 | 6.3:-53059558 | MS.gene34569:CDS |
GCCAGACTGAAAGAGGAATT+GGG | 0.506100 | 6.3:-53059404 | MS.gene34569:CDS |
GGTAGCGGCGGCAATGGCGA+GGG | 0.507624 | 6.3:-53056519 | MS.gene34569:CDS |
GTCCAATGGTGGACCAATGC+AGG | 0.512521 | 6.3:-53057150 | MS.gene34569:CDS |
ATGGAGGCAAATGCCGAGAC+TGG | 0.514571 | 6.3:+53059344 | None:intergenic |
TGAAAATGCCAGACTGAAAG+AGG | 0.521331 | 6.3:-53059411 | MS.gene34569:CDS |
TCTGGCTTCGAACTTGGTAT+GGG | 0.522216 | 6.3:-53059302 | MS.gene34569:CDS |
CCAAACCAAGCTTCTTGCTA+AGG | 0.522980 | 6.3:+53060050 | None:intergenic |
CTGCCGATGGGATTTGGTAT+GGG | 0.523570 | 6.3:-53059239 | MS.gene34569:CDS |
TGCATTTGGTGCTCATCGAT+GGG | 0.525055 | 6.3:-53057738 | MS.gene34569:CDS |
ATCTGGATTGCAATCACCAA+TGG | 0.526445 | 6.3:-53059186 | MS.gene34569:CDS |
TTGACGTTTGAATGACCATC+CGG | 0.527247 | 6.3:+53056567 | None:intergenic |
CGCCTCTCATCTGTGCCTCA+CGG | 0.527454 | 6.3:+53057186 | None:intergenic |
AGTGACGGTAGCGGCGGCAA+TGG | 0.531829 | 6.3:-53056525 | MS.gene34569:CDS |
CCAATGGACGATAGGCTTGG+TGG | 0.532530 | 6.3:+53057774 | None:intergenic |
AATGGAAGGAAATGTTGGAA+TGG | 0.532593 | 6.3:-53060649 | MS.gene34569:CDS |
ACTGACCTTAGCAAGAAGCT+TGG | 0.532692 | 6.3:-53060055 | MS.gene34569:CDS |
GTTTAGGCTGTGAATCCGAC+TGG | 0.533808 | 6.3:-53056747 | MS.gene34569:intron |
TCAACAAACTGTTCTCAGCT+CGG | 0.535021 | 6.3:+53059522 | None:intergenic |
TCTGGATTGCAATCACCAAT+GGG | 0.536322 | 6.3:-53059185 | MS.gene34569:CDS |
CAGAGAATCAAAGATGCACT+TGG | 0.539207 | 6.3:-53056375 | MS.gene34569:CDS |
AATCAACAGTGCAGGTCTTG+TGG | 0.541045 | 6.3:-53058928 | MS.gene34569:CDS |
AACACCCTTTGCCGAGGCAA+CGG | 0.542039 | 6.3:+53057218 | None:intergenic |
CAATCACCAATGGGAATGAT+CGG | 0.542363 | 6.3:-53059176 | MS.gene34569:CDS |
TCAAACGTCAACAATATCGT+TGG | 0.546050 | 6.3:-53056555 | MS.gene34569:CDS |
GACTCATGGACTGATAGCTC+TGG | 0.546341 | 6.3:-53056696 | MS.gene34569:CDS |
TCGAGTTCCTGAATTTGTTG+AGG | 0.546869 | 6.3:+53060459 | None:intergenic |
GAGGTGGTCCACATTGCTAA+AGG | 0.548271 | 6.3:-53057128 | MS.gene34569:CDS |
AATGGCGAGGGCGGAGACAA+TGG | 0.548601 | 6.3:-53056507 | MS.gene34569:CDS |
CTGTGTGGATTCCGTTGCCT+CGG | 0.548818 | 6.3:-53057229 | MS.gene34569:CDS |
GCCGAAGAACTTGTGGGTCA+AGG | 0.548931 | 6.3:+53059370 | None:intergenic |
ACCTTGGATGTCATATCTAG+TGG | 0.549602 | 6.3:-53058726 | MS.gene34569:CDS |
GTTCTTCGGCCGACCAGTCT+CGG | 0.550974 | 6.3:-53059357 | MS.gene34569:CDS |
TTGCAGGACAGGAAAATGGA+AGG | 0.552870 | 6.3:-53060663 | None:intergenic |
CCACCAAGCCTATCGTCCAT+TGG | 0.553933 | 6.3:-53057774 | MS.gene34569:CDS |
CTCCGTGAGGCACAGATGAG+AGG | 0.554603 | 6.3:-53057188 | MS.gene34569:CDS |
TGGAGAAGGCACTTGAACCT+CGG | 0.554900 | 6.3:+53058576 | None:intergenic |
ACTAATCAGTATGTCTCAGC+CGG | 0.556065 | 6.3:-53059093 | MS.gene34569:CDS |
CGCCCATGTTACTAATGGGA+AGG | 0.556790 | 6.3:+53057324 | None:intergenic |
ATGTGGACCACCTCCTGCAT+TGG | 0.557152 | 6.3:+53057137 | None:intergenic |
TGGTGGACCAATGCAGGAGG+TGG | 0.557647 | 6.3:-53057144 | MS.gene34569:CDS |
AGCGGCGGCAATGGCGAGGG+CGG | 0.557775 | 6.3:-53056516 | MS.gene34569:CDS |
TTCAACATGTCGCTGCCGAT+GGG | 0.557834 | 6.3:-53059251 | MS.gene34569:CDS |
TCCTTCGAGTGCGTGCAAGT+GGG | 0.557945 | 6.3:-53057351 | MS.gene34569:CDS |
AGTGCCTTCTCCATTAGTGC+CGG | 0.558202 | 6.3:-53058566 | MS.gene34569:CDS |
CTATTTCCGATCATTCCCAT+TGG | 0.561989 | 6.3:+53059170 | None:intergenic |
GTGACATGAAAATCATGTAT+CGG | 0.563427 | 6.3:-53057298 | MS.gene34569:CDS |
TGGATTTGGCATAGTTATGG+AGG | 0.563900 | 6.3:+53059328 | None:intergenic |
TCCCACTTGCACGCACTCGA+AGG | 0.564609 | 6.3:+53057350 | None:intergenic |
CTGGTCGGCCGAAGAACTTG+TGG | 0.566405 | 6.3:+53059363 | None:intergenic |
GCCTCAGAATCATATTCTCA+TGG | 0.568131 | 6.3:+53059561 | None:intergenic |
TAACCAATGGACGATAGGCT+TGG | 0.569894 | 6.3:+53057771 | None:intergenic |
CTGCTTCCCTCGTTTCCAGT+CGG | 0.570440 | 6.3:+53056732 | None:intergenic |
CACTTGCAAAGATCCACTCC+TGG | 0.570849 | 6.3:+53058692 | None:intergenic |
GATGTCTGATTACTTCTGGT+CGG | 0.572331 | 6.3:-53057381 | MS.gene34569:CDS |
TCCTTGGACATCGTGATCAG+TGG | 0.574710 | 6.3:-53056639 | MS.gene34569:CDS |
TTTATGTCAATAGGATCAGT+GGG | 0.577370 | 6.3:-53058784 | MS.gene34569:intron |
GATCCTTCCCATTAGTAACA+TGG | 0.577737 | 6.3:-53057327 | MS.gene34569:CDS |
ATCCTTCCCATTAGTAACAT+GGG | 0.578409 | 6.3:-53057326 | MS.gene34569:CDS |
ATTTATGTCAATAGGATCAG+TGG | 0.578761 | 6.3:-53058785 | MS.gene34569:intron |
GAGTGGGATGCTTTGTCCAA+TGG | 0.579467 | 6.3:-53057164 | MS.gene34569:CDS |
GAACTTGGTATGGGAAGGAA+TGG | 0.581764 | 6.3:-53059293 | MS.gene34569:CDS |
GGAATGAATGGAACCAGGAG+TGG | 0.582304 | 6.3:-53058705 | MS.gene34569:CDS |
ATGGGATTTGGTATGGGAGA+CGG | 0.583168 | 6.3:-53059233 | MS.gene34569:CDS |
AAAATTGTCCAGGAATTGCT+GGG | 0.583398 | 6.3:+53059459 | None:intergenic |
GCTGATCATCAGCAGCATCA+AGG | 0.584879 | 6.3:+53060520 | None:intergenic |
GGAATTAACCAATGGACGAT+AGG | 0.591089 | 6.3:+53057766 | None:intergenic |
TGGTCGGCCGAAGAACTTGT+GGG | 0.591669 | 6.3:+53059364 | None:intergenic |
GAATCGCCGAACTCAGATGA+AGG | 0.591844 | 6.3:-53059999 | MS.gene34569:intron |
GAAGCTCCAGCAATCATACA+TGG | 0.592792 | 6.3:+53058750 | None:intergenic |
CCACCGCAATTGCTGCATGT+CGG | 0.593169 | 6.3:+53059482 | None:intergenic |
AGGCAAATGCCGAGACTGGT+CGG | 0.593975 | 6.3:+53059348 | None:intergenic |
TTGGACATCGTGATCAGTGG+TGG | 0.594344 | 6.3:-53056636 | MS.gene34569:CDS |
GAGCTTGTCCTTTAGCAATG+TGG | 0.594426 | 6.3:+53057120 | None:intergenic |
AATCCGACATGCAGCAATTG+CGG | 0.597113 | 6.3:-53059485 | MS.gene34569:CDS |
ACCACTGATCACGATGTCCA+AGG | 0.597274 | 6.3:+53056638 | None:intergenic |
CTAGTGGAATGAATGGAACC+AGG | 0.599081 | 6.3:-53058710 | MS.gene34569:CDS |
GCTTCGAACTTGGTATGGGA+AGG | 0.599779 | 6.3:-53059298 | MS.gene34569:CDS |
AACAAATTCAGGAACTCGAA+AGG | 0.602744 | 6.3:-53060455 | MS.gene34569:intron |
GGCACAGATGAGAGGCGAGT+GGG | 0.605317 | 6.3:-53057180 | MS.gene34569:CDS |
ATCGTTGGAACTTCAAGTGA+CGG | 0.606411 | 6.3:-53056540 | MS.gene34569:CDS |
GGGATGATGACTATGAAAGC+AGG | 0.606556 | 6.3:-53060581 | MS.gene34569:CDS |
CTGTTATTAATCAACAGTGC+AGG | 0.607247 | 6.3:-53058936 | MS.gene34569:CDS |
GGAACTTCAAGTGACGGTAG+CGG | 0.608019 | 6.3:-53056534 | MS.gene34569:CDS |
TGTGGAAACGATGTTGGATG+CGG | 0.612967 | 6.3:-53058910 | MS.gene34569:intron |
ATTGTGACATGAGGACAGCA+AGG | 0.623011 | 6.3:+53057687 | None:intergenic |
TCCTCCAAAATACAGCCAGA+AGG | 0.624254 | 6.3:+53058415 | None:intergenic |
CGAACCGGCACTAATGGAGA+AGG | 0.624381 | 6.3:+53058562 | None:intergenic |
TCCAAGGATTGTGAATCGAT+TGG | 0.625878 | 6.3:+53056654 | None:intergenic |
TGTGAATCCGACTGGAAACG+AGG | 0.632294 | 6.3:-53056739 | MS.gene34569:CDS |
AAATCAAACACCCTTTGCCG+AGG | 0.632804 | 6.3:+53057212 | None:intergenic |
GGCGAGGGCGGAGACAATGG+TGG | 0.633411 | 6.3:-53056504 | MS.gene34569:CDS |
TTGTGACATGAGGACAGCAA+GGG | 0.634359 | 6.3:+53057688 | None:intergenic |
TCCACTAGATATGACATCCA+AGG | 0.637956 | 6.3:+53058725 | None:intergenic |
TGGGATGCTTTGTCCAATGG+TGG | 0.638372 | 6.3:-53057161 | MS.gene34569:CDS |
GCATGCTGAAGCTCGCGCAG+AGG | 0.639288 | 6.3:-53057403 | MS.gene34569:CDS |
GCCATGAGAATATGATTCTG+AGG | 0.640637 | 6.3:-53059562 | MS.gene34569:CDS |
GCATTGCCGGAATTAACCAA+TGG | 0.645151 | 6.3:+53057758 | None:intergenic |
AGGCACAGATGAGAGGCGAG+TGG | 0.645582 | 6.3:-53057181 | MS.gene34569:CDS |
CCGACATGCAGCAATTGCGG+TGG | 0.651218 | 6.3:-53059482 | MS.gene34569:CDS |
GTTGATGTTTCAGTCAACGT+CGG | 0.651473 | 6.3:-53058484 | MS.gene34569:CDS |
TTTGCAAAGCAGCATGTCGG+AGG | 0.652279 | 6.3:-53058520 | MS.gene34569:CDS |
TCACAATCTGATGACCCCAC+AGG | 0.653349 | 6.3:-53057671 | MS.gene34569:intron |
ACTTCAAGTGACGGTAGCGG+CGG | 0.655300 | 6.3:-53056531 | MS.gene34569:CDS |
ACTTAGCACGATGCTCGAAG+TGG | 0.656173 | 6.3:+53057262 | None:intergenic |
CAGGAGTGGATCTTTGCAAG+TGG | 0.658333 | 6.3:-53058691 | MS.gene34569:intron |
CATGCTGCTTTGCAAACCTG+AGG | 0.658678 | 6.3:+53058527 | None:intergenic |
TTCTGAGGCAGGAAAATGAG+AGG | 0.661509 | 6.3:-53059547 | MS.gene34569:CDS |
GATGGGTTGCAACTCTCCAG+AGG | 0.663990 | 6.3:-53057721 | MS.gene34569:CDS |
AGGTTTGCAAAGCAGCATGT+CGG | 0.665230 | 6.3:-53058523 | MS.gene34569:CDS |
GTGAATCCGACTGGAAACGA+GGG | 0.674287 | 6.3:-53056738 | MS.gene34569:CDS |
TCTCCCATACCAAATCCCAT+CGG | 0.689519 | 6.3:+53059236 | None:intergenic |
TAAGTGCTGCAACTTCTGTG+TGG | 0.690299 | 6.3:-53057244 | MS.gene34569:CDS |
GGTCATCAGATTGTGACATG+AGG | 0.692325 | 6.3:+53057678 | None:intergenic |
TCCAAACTCTTAATCCAGAG+AGG | 0.692635 | 6.3:+53059065 | None:intergenic |
TCAAACAAGTAAGCTCACAA+TGG | 0.693857 | 6.3:-53056439 | MS.gene34569:CDS |
AGGTCTTGTGGAAACGATGT+TGG | 0.695525 | 6.3:-53058916 | MS.gene34569:CDS |
TGTGGGTCAAGGTAGACACT+CGG | 0.700917 | 6.3:+53059381 | None:intergenic |
AACAAAGTTGCAGACCTGTG+GGG | 0.720649 | 6.3:+53057657 | None:intergenic |
CAATGGTGGACCAATGCAGG+AGG | 0.741696 | 6.3:-53057147 | MS.gene34569:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAAGTATAATTTATATAT+CGG | - | chr6.3:53058150-53058169 | MS.gene34569:intron | 10.0% |
!! | TATTTATTATTTATGTCAAT+AGG | - | chr6.3:53058217-53058236 | MS.gene34569:intron | 10.0% |
!!! | TTTTTACATAATTTGTAATT+AGG | - | chr6.3:53056827-53056846 | MS.gene34569:intron | 10.0% |
!! | ACAAATTATGTAAAAATCTA+AGG | + | chr6.3:53056823-53056842 | None:intergenic | 15.0% |
!! | ATTTATAAGTAAATTCTAGT+AGG | + | chr6.3:53057334-53057353 | None:intergenic | 15.0% |
!! | ATTTATGAAGAACATAATAT+TGG | + | chr6.3:53059965-53059984 | None:intergenic | 15.0% |
!! | GATTATTTATAATCATCATA+GGG | - | chr6.3:53059082-53059101 | MS.gene34569:CDS | 15.0% |
!! | TTAGTACAGTATATATAAAT+TGG | + | chr6.3:53057392-53057411 | None:intergenic | 15.0% |
!! | TTTATAAGTAAATTCTAGTA+GGG | + | chr6.3:53057333-53057352 | None:intergenic | 15.0% |
!!! | ATTAATTACGATTTTGATTA+TGG | - | chr6.3:53058397-53058416 | MS.gene34569:CDS | 15.0% |
!!! | TCAATTTTGCTATATATATT+TGG | - | chr6.3:53058370-53058389 | MS.gene34569:intron | 15.0% |
!!! | TTTAAATAGAGTTCTTATTT+GGG | - | chr6.3:53058850-53058869 | MS.gene34569:intron | 15.0% |
!!! | TTTTTTTTTTTTCTTCGTTT+AGG | - | chr6.3:53060247-53060266 | MS.gene34569:intron | 15.0% |
!! | AATTATGTAAAAATCTAAGG+AGG | + | chr6.3:53056820-53056839 | None:intergenic | 20.0% |
!! | ATAAAAATAACTCATGTTTG+AGG | + | chr6.3:53060032-53060051 | None:intergenic | 20.0% |
!! | ATTATGTAAAAATCTAAGGA+GGG | + | chr6.3:53056819-53056838 | None:intergenic | 20.0% |
!! | CAAATAAGAACTCTATTTAA+AGG | + | chr6.3:53058851-53058870 | None:intergenic | 20.0% |
!! | CGATTATTTATAATCATCAT+AGG | - | chr6.3:53059081-53059100 | MS.gene34569:CDS | 20.0% |
!! | CTTTAAATAGAGTTCTTATT+TGG | - | chr6.3:53058849-53058868 | MS.gene34569:intron | 20.0% |
!! | GAACTAAAAATGTTTGTAAT+TGG | - | chr6.3:53056664-53056683 | MS.gene34569:CDS | 20.0% |
!! | TATAAATAATCGAAAAATGC+TGG | + | chr6.3:53059073-53059092 | None:intergenic | 20.0% |
!! | TGATTATCTATGGTTTAATT+GGG | - | chr6.3:53056622-53056641 | MS.gene34569:CDS | 20.0% |
!! | TGTATGATCTACTATATATT+TGG | - | chr6.3:53057304-53057323 | MS.gene34569:CDS | 20.0% |
!! | TTATAAGTAAATTCTAGTAG+GGG | + | chr6.3:53057332-53057351 | None:intergenic | 20.0% |
!! | TTGATTATCTATGGTTTAAT+TGG | - | chr6.3:53056621-53056640 | MS.gene34569:CDS | 20.0% |
!!! | TGATTATTTTAGTTTCTTCA+AGG | - | chr6.3:53056903-53056922 | MS.gene34569:intron | 20.0% |
!!! | TTATTTTCAAGTATGAACTA+TGG | - | chr6.3:53059118-53059137 | MS.gene34569:CDS | 20.0% |
!!! | TTTGGTTTATCACATAAATT+AGG | + | chr6.3:53059147-53059166 | None:intergenic | 20.0% |
! | AATTTGTCTGTAATATGTTC+GGG | - | chr6.3:53056694-53056713 | MS.gene34569:CDS | 25.0% |
! | AGAAGAAGAAGAAATATCAT+AGG | - | chr6.3:53056522-53056541 | MS.gene34569:CDS | 25.0% |
! | CAAACAAAAAGAATTTCAGA+TGG | + | chr6.3:53059991-53060010 | None:intergenic | 25.0% |
! | CAGTATATATAAATTGGTGA+TGG | + | chr6.3:53057386-53057405 | None:intergenic | 25.0% |
! | CATATTCAATTAGTTCAGTT+TGG | + | chr6.3:53056758-53056777 | None:intergenic | 25.0% |
! | CTCTATTTAAAGGATTTAAG+TGG | + | chr6.3:53058841-53058860 | None:intergenic | 25.0% |
! | GAAATTCAAAAGAATACACA+AGG | + | chr6.3:53058801-53058820 | None:intergenic | 25.0% |
! | GAACATTGAATAAGATATTG+AGG | + | chr6.3:53060141-53060160 | None:intergenic | 25.0% |
! | GAATTTGTCTGTAATATGTT+CGG | - | chr6.3:53056693-53056712 | MS.gene34569:CDS | 25.0% |
! | GATTATCTATGGTTTAATTG+GGG | - | chr6.3:53056623-53056642 | MS.gene34569:CDS | 25.0% |
! | GGTTTATATAGAATCATTCT+TGG | + | chr6.3:53060181-53060200 | None:intergenic | 25.0% |
! | TAAATGCGATTGATTATCTA+TGG | - | chr6.3:53056612-53056631 | MS.gene34569:CDS | 25.0% |
! | TGATTGATTGACAATGATAA+TGG | + | chr6.3:53057164-53057183 | None:intergenic | 25.0% |
! | TGTTGATGCAATTGATATTA+GGG | - | chr6.3:53057070-53057089 | MS.gene34569:intron | 25.0% |
! | TTGTTGATGCAATTGATATT+AGG | - | chr6.3:53057069-53057088 | MS.gene34569:intron | 25.0% |
!! | AAAAATATTTTCACGACATG+AGG | + | chr6.3:53059042-53059061 | None:intergenic | 25.0% |
!! | ATCGATGTTTAAAATACACA+AGG | + | chr6.3:53058704-53058723 | None:intergenic | 25.0% |
!! | TAACTTGCAACATGTTAAAA+AGG | + | chr6.3:53060202-53060221 | None:intergenic | 25.0% |
!!! | ATTAACAGTTCTGGAAATTT+TGG | + | chr6.3:53058958-53058977 | None:intergenic | 25.0% |
!!! | GAGAATTTTGATGATTTTTC+TGG | - | chr6.3:53056461-53056480 | MS.gene34569:CDS | 25.0% |
!!! | GTTACAAAACCATTTTGTTT+CGG | + | chr6.3:53058032-53058051 | None:intergenic | 25.0% |
!!! | TTAATTGGGGATTTTGAAAT+AGG | - | chr6.3:53056636-53056655 | MS.gene34569:CDS | 25.0% |
AAGTCAAAGATTAACAGTTC+TGG | + | chr6.3:53058967-53058986 | None:intergenic | 30.0% | |
ACGACTTAGACATTGTTTAT+AGG | - | chr6.3:53057101-53057120 | MS.gene34569:CDS | 30.0% | |
ATTTATGTCAATAGGATCAG+TGG | - | chr6.3:53058225-53058244 | MS.gene34569:intron | 30.0% | |
ATTTGGATTTGGCATAGTTA+TGG | + | chr6.3:53057688-53057707 | None:intergenic | 30.0% | |
ATTTGTCTGTAATATGTTCG+GGG | - | chr6.3:53056695-53056714 | MS.gene34569:CDS | 30.0% | |
GTAATTTCCATCAGTCAATT+TGG | + | chr6.3:53059165-53059184 | None:intergenic | 30.0% | |
GTGACATGAAAATCATGTAT+CGG | - | chr6.3:53059712-53059731 | MS.gene34569:intron | 30.0% | |
GTTGACACTAAGAATAGAAA+TGG | + | chr6.3:53059925-53059944 | None:intergenic | 30.0% | |
TCAATTAGTTCAGTTTGGTT+TGG | + | chr6.3:53056753-53056772 | None:intergenic | 30.0% | |
TGATAAACCAAATTGACTGA+TGG | - | chr6.3:53059155-53059174 | MS.gene34569:CDS | 30.0% | |
TGTCAATCAATCATAATCGT+TGG | - | chr6.3:53057171-53057190 | MS.gene34569:CDS | 30.0% | |
TTTAACGATCCGAAACAAAA+TGG | - | chr6.3:53058020-53058039 | MS.gene34569:intron | 30.0% | |
TTTATGTCAATAGGATCAGT+GGG | - | chr6.3:53058226-53058245 | MS.gene34569:intron | 30.0% | |
! | ATTTTACCTTCATCTGAGTT+CGG | + | chr6.3:53057020-53057039 | None:intergenic | 30.0% |
! | GAAAAAGTGTATATAAGCCT+CGG | + | chr6.3:53060119-53060138 | None:intergenic | 30.0% |
!! | CTGTTAATCTTTGACTTGAA+TGG | - | chr6.3:53058970-53058989 | MS.gene34569:CDS | 30.0% |
!! | TTTGACTTGAATGGAAATCA+TGG | - | chr6.3:53058979-53058998 | MS.gene34569:CDS | 30.0% |
!! | TTTTGTTTCGGATCGTTAAA+AGG | + | chr6.3:53058020-53058039 | None:intergenic | 30.0% |
AAAATTGTCCAGGAATTGCT+GGG | + | chr6.3:53057554-53057573 | None:intergenic | 35.0% | |
AACAAATTCAGGAACTCGAA+AGG | - | chr6.3:53056555-53056574 | MS.gene34569:CDS | 35.0% | |
AATGTTGGAATGGGACTTAT+TGG | - | chr6.3:53056371-53056390 | MS.gene34569:CDS | 35.0% | |
AATTACTAGAGTTGACGTGT+CGG | + | chr6.3:53059403-53059422 | None:intergenic | 35.0% | |
ACTATGCCAAATCCAAATTC+TGG | - | chr6.3:53057690-53057709 | MS.gene34569:CDS | 35.0% | |
ACTTACCTTGCAAAAACCAT+TGG | + | chr6.3:53058626-53058645 | None:intergenic | 35.0% | |
ATCCGGAAGAATTGAAAAAC+CGG | + | chr6.3:53060429-53060448 | None:intergenic | 35.0% | |
ATCCTTCCCATTAGTAACAT+GGG | - | chr6.3:53059684-53059703 | MS.gene34569:intron | 35.0% | |
ATGGAAGGAAATGTTGGAAT+GGG | - | chr6.3:53056362-53056381 | MS.gene34569:CDS | 35.0% | |
ATGTTTCCATGTATGATTGC+TGG | - | chr6.3:53058254-53058273 | MS.gene34569:intron | 35.0% | |
ATTGGAGAGAACTTTGATTC+TGG | - | chr6.3:53056389-53056408 | MS.gene34569:CDS | 35.0% | |
CTGTTATTAATCAACAGTGC+AGG | - | chr6.3:53058074-53058093 | MS.gene34569:intron | 35.0% | |
CTTACCTTGCAAAAACCATT+GGG | + | chr6.3:53058625-53058644 | None:intergenic | 35.0% | |
GACAACACTCTCATCATATT+GGG | + | chr6.3:53059217-53059236 | None:intergenic | 35.0% | |
GTCATATCTAGTGGAATGAA+TGG | - | chr6.3:53058293-53058312 | MS.gene34569:intron | 35.0% | |
TACTTCAAAAGTCGTGTGAT+TGG | - | chr6.3:53057234-53057253 | MS.gene34569:CDS | 35.0% | |
TCAAACAAGTAAGCTCACAA+TGG | - | chr6.3:53060571-53060590 | MS.gene34569:CDS | 35.0% | |
TCAAACGTCAACAATATCGT+TGG | - | chr6.3:53060455-53060474 | MS.gene34569:intron | 35.0% | |
TCCAAAATGTCTCGACAATT+AGG | - | chr6.3:53060084-53060103 | MS.gene34569:CDS | 35.0% | |
TGCATCTTTGATTCTCTGAA+TGG | + | chr6.3:53060633-53060652 | None:intergenic | 35.0% | |
TGTTTCCATTAGCAGCATTA+CGG | + | chr6.3:53058552-53058571 | None:intergenic | 35.0% | |
TTCTTCTTCTTCTTGCTCTT+TGG | + | chr6.3:53056515-53056534 | None:intergenic | 35.0% | |
TTTCTTGAATTAGACGCAAC+TGG | - | chr6.3:53057422-53057441 | MS.gene34569:CDS | 35.0% | |
! | AATATTTTCACGACATGAGG+CGG | + | chr6.3:53059039-53059058 | None:intergenic | 35.0% |
! | AATTCCTGGACAATTTTCAC+CGG | - | chr6.3:53057557-53057576 | MS.gene34569:intron | 35.0% |
! | ATGGAAATCATGGTTGATGT+AGG | - | chr6.3:53058989-53059008 | MS.gene34569:CDS | 35.0% |
! | TATCGTCCATTGGTTAATTC+CGG | - | chr6.3:53059246-53059265 | MS.gene34569:CDS | 35.0% |
! | TCCTAATTGTCGAGACATTT+TGG | + | chr6.3:53060088-53060107 | None:intergenic | 35.0% |
!! | AACTTTGATTCTGGTTTGCT+TGG | - | chr6.3:53056398-53056417 | MS.gene34569:CDS | 35.0% |
!! | TTCCGGTTTTTCAATTCTTC+CGG | - | chr6.3:53060424-53060443 | MS.gene34569:intron | 35.0% |
!!! | CACTTTTTCACTCACAAATC+TGG | - | chr6.3:53059519-53059538 | MS.gene34569:CDS | 35.0% |
ACCTTGGATGTCATATCTAG+TGG | - | chr6.3:53058284-53058303 | MS.gene34569:intron | 40.0% | |
ACTAATCAGTATGTCTCAGC+CGG | - | chr6.3:53057917-53057936 | MS.gene34569:intron | 40.0% | |
ACTGAAGCTACAAGACAAAC+TGG | - | chr6.3:53058050-53058069 | MS.gene34569:intron | 40.0% | |
AGAGGATGTCTGATTACTTC+TGG | - | chr6.3:53059625-53059644 | MS.gene34569:intron | 40.0% | |
AGCGACATGTTGAAATTGCT+TGG | + | chr6.3:53057753-53057772 | None:intergenic | 40.0% | |
AGGAAGCTATATTGTCGAAC+CGG | + | chr6.3:53058466-53058485 | None:intergenic | 40.0% | |
ATAACAAAGTTGCAGACCTG+TGG | + | chr6.3:53059358-53059377 | None:intergenic | 40.0% | |
ATCGTTGGAACTTCAAGTGA+CGG | - | chr6.3:53060470-53060489 | MS.gene34569:CDS | 40.0% | |
ATCTGGATTGCAATCACCAA+TGG | - | chr6.3:53057824-53057843 | MS.gene34569:intron | 40.0% | |
ATGTCTGATTACTTCTGGTC+GGG | - | chr6.3:53059630-53059649 | MS.gene34569:intron | 40.0% | |
ATTGCTAAAGGACAAGCTCT+TGG | - | chr6.3:53059894-53059913 | MS.gene34569:intron | 40.0% | |
CAATCACCAATGGGAATGAT+CGG | - | chr6.3:53057834-53057853 | MS.gene34569:intron | 40.0% | |
CAGAGAATCAAAGATGCACT+TGG | - | chr6.3:53060635-53060654 | MS.gene34569:CDS | 40.0% | |
CTATTTCCGATCATTCCCAT+TGG | + | chr6.3:53057843-53057862 | None:intergenic | 40.0% | |
CTCTGGATTAAGAGTTTGGA+TGG | - | chr6.3:53057948-53057967 | MS.gene34569:intron | 40.0% | |
GAAAATTGTCCAGGAATTGC+TGG | + | chr6.3:53057555-53057574 | None:intergenic | 40.0% | |
GATCCTTCCCATTAGTAACA+TGG | - | chr6.3:53059683-53059702 | MS.gene34569:intron | 40.0% | |
GATGGAAATTACAATGCTGC+AGG | - | chr6.3:53059173-53059192 | MS.gene34569:CDS | 40.0% | |
GATGTCTGATTACTTCTGGT+CGG | - | chr6.3:53059629-53059648 | MS.gene34569:intron | 40.0% | |
GCCATGAGAATATGATTCTG+AGG | - | chr6.3:53057448-53057467 | MS.gene34569:intron | 40.0% | |
GCCTCAGAATCATATTCTCA+TGG | + | chr6.3:53057452-53057471 | None:intergenic | 40.0% | |
GCTATGCTTATTGATCTTGC+AGG | - | chr6.3:53057879-53057898 | MS.gene34569:intron | 40.0% | |
GGAAGAATTGAAAAACCGGA+AGG | + | chr6.3:53060425-53060444 | None:intergenic | 40.0% | |
GGAATTAACCAATGGACGAT+AGG | + | chr6.3:53059247-53059266 | None:intergenic | 40.0% | |
GGACAACACTCTCATCATAT+TGG | + | chr6.3:53059218-53059237 | None:intergenic | 40.0% | |
GTTAATTCCGGCAATGCATT+TGG | - | chr6.3:53059258-53059277 | MS.gene34569:CDS | 40.0% | |
GTTGATGTTTCAGTCAACGT+CGG | - | chr6.3:53058526-53058545 | MS.gene34569:CDS | 40.0% | |
TAACAAAGTTGCAGACCTGT+GGG | + | chr6.3:53059357-53059376 | None:intergenic | 40.0% | |
TACAATGCTGCAGGTTACTT+GGG | - | chr6.3:53059182-53059201 | MS.gene34569:CDS | 40.0% | |
TCAACAAACTGTTCTCAGCT+CGG | + | chr6.3:53057491-53057510 | None:intergenic | 40.0% | |
TCACGAACACGAACACATTA+TGG | - | chr6.3:53058927-53058946 | MS.gene34569:CDS | 40.0% | |
TCAGTTCTTTGCTTCTCATC+AGG | + | chr6.3:53056940-53056959 | None:intergenic | 40.0% | |
TCCAAACTCTTAATCCAGAG+AGG | + | chr6.3:53057948-53057967 | None:intergenic | 40.0% | |
TCCACTAGATATGACATCCA+AGG | + | chr6.3:53058288-53058307 | None:intergenic | 40.0% | |
TCCTCTCTGGATTAAGAGTT+TGG | - | chr6.3:53057944-53057963 | MS.gene34569:intron | 40.0% | |
TCGAAGCCAGAATTTGGATT+TGG | + | chr6.3:53057699-53057718 | None:intergenic | 40.0% | |
TCTGCAAAACTAGTGAATCG+AGG | - | chr6.3:53058760-53058779 | MS.gene34569:CDS | 40.0% | |
TCTGGATTGCAATCACCAAT+GGG | - | chr6.3:53057825-53057844 | MS.gene34569:intron | 40.0% | |
TGAAAATGCCAGACTGAAAG+AGG | - | chr6.3:53057599-53057618 | MS.gene34569:intron | 40.0% | |
TGGATTTGGCATAGTTATGG+AGG | + | chr6.3:53057685-53057704 | None:intergenic | 40.0% | |
TTAATCCAGAGAGGAGAATC+CGG | + | chr6.3:53057939-53057958 | None:intergenic | 40.0% | |
TTACAATGCTGCAGGTTACT+TGG | - | chr6.3:53059181-53059200 | MS.gene34569:CDS | 40.0% | |
TTCGACAATATAGCTTCCTC+AGG | - | chr6.3:53058467-53058486 | MS.gene34569:CDS | 40.0% | |
TTGACGTTTGAATGACCATC+CGG | + | chr6.3:53060446-53060465 | None:intergenic | 40.0% | |
TTTCTTACCATGTGGAGTCA+TGG | + | chr6.3:53059586-53059605 | None:intergenic | 40.0% | |
! | AGCATGCTTTTCTTACCATG+TGG | + | chr6.3:53059594-53059613 | None:intergenic | 40.0% |
! | TTTGCCCAATGGTTTTTGCA+AGG | - | chr6.3:53058618-53058637 | MS.gene34569:intron | 40.0% |
!! | ATTTTGGAGGATTTGCCCAA+TGG | - | chr6.3:53058607-53058626 | MS.gene34569:intron | 40.0% |
!! | GGTTTTTCAATTCTTCCGGA+TGG | - | chr6.3:53060428-53060447 | MS.gene34569:intron | 40.0% |
!! | TCGAGTTCCTGAATTTGTTG+AGG | + | chr6.3:53056554-53056573 | None:intergenic | 40.0% |
!! | TGAGAATATGATTCTGAGGC+AGG | - | chr6.3:53057452-53057471 | MS.gene34569:intron | 40.0% |
!! | TTGATTCTGGTTTGCTTGGA+AGG | - | chr6.3:53056402-53056421 | MS.gene34569:CDS | 40.0% |
AAATCAAACACCCTTTGCCG+AGG | + | chr6.3:53059801-53059820 | None:intergenic | 45.0% | |
AACAAAGTTGCAGACCTGTG+GGG | + | chr6.3:53059356-53059375 | None:intergenic | 45.0% | |
AATCAACAGTGCAGGTCTTG+TGG | - | chr6.3:53058082-53058101 | MS.gene34569:intron | 45.0% | |
AATCCGACATGCAGCAATTG+CGG | - | chr6.3:53057525-53057544 | MS.gene34569:intron | 45.0% | |
ACCTTGACCCACAAGTTCTT+CGG | - | chr6.3:53057639-53057658 | MS.gene34569:intron | 45.0% | |
ACTGACCTTAGCAAGAAGCT+TGG | - | chr6.3:53056955-53056974 | MS.gene34569:intron | 45.0% | |
ACTGTCGCCCATGTTACTAA+TGG | + | chr6.3:53059694-53059713 | None:intergenic | 45.0% | |
AGCTGTAAGAAGCTTCCTTC+TGG | - | chr6.3:53058580-53058599 | MS.gene34569:CDS | 45.0% | |
AGGTTTGCAAAGCAGCATGT+CGG | - | chr6.3:53058487-53058506 | MS.gene34569:CDS | 45.0% | |
ATGAGCACCAAATGCATTGC+CGG | + | chr6.3:53059268-53059287 | None:intergenic | 45.0% | |
ATGAGGCGGCAATGTATGAT+TGG | + | chr6.3:53059025-53059044 | None:intergenic | 45.0% | |
ATTGTGACATGAGGACAGCA+AGG | + | chr6.3:53059326-53059345 | None:intergenic | 45.0% | |
CCAAACCAAGCTTCTTGCTA+AGG | + | chr6.3:53056963-53056982 | None:intergenic | 45.0% | |
CCAAGTTCGAAGCCAGAATT+TGG | + | chr6.3:53057705-53057724 | None:intergenic | 45.0% | |
CCTTAGCAAGAAGCTTGGTT+TGG | - | chr6.3:53056960-53056979 | MS.gene34569:intron | 45.0% | |
CGAACAAGCAAGTCAAGTTC+TGG | - | chr6.3:53056983-53057002 | MS.gene34569:intron | 45.0% | |
CTAGTGGAATGAATGGAACC+AGG | - | chr6.3:53058300-53058319 | MS.gene34569:intron | 45.0% | |
CTGTCGCCCATGTTACTAAT+GGG | + | chr6.3:53059693-53059712 | None:intergenic | 45.0% | |
CTTTGCTTCTCATCAGGATG+TGG | + | chr6.3:53056934-53056953 | None:intergenic | 45.0% | |
GAAAAACCGGAAGGCAAAAG+AGG | + | chr6.3:53060416-53060435 | None:intergenic | 45.0% | |
GAACTTGGTATGGGAAGGAA+TGG | - | chr6.3:53057717-53057736 | MS.gene34569:CDS | 45.0% | |
GAAGCTCCAGCAATCATACA+TGG | + | chr6.3:53058263-53058282 | None:intergenic | 45.0% | |
GAGCTTGTCCTTTAGCAATG+TGG | + | chr6.3:53059893-53059912 | None:intergenic | 45.0% | |
GATGACTATGAAAGCAGGTC+TGG | - | chr6.3:53056434-53056453 | MS.gene34569:CDS | 45.0% | |
GCACACTCCTCAACAAATTC+AGG | - | chr6.3:53056544-53056563 | MS.gene34569:CDS | 45.0% | |
GCATTGCCGGAATTAACCAA+TGG | + | chr6.3:53059255-53059274 | None:intergenic | 45.0% | |
GCCAGACTGAAAGAGGAATT+GGG | - | chr6.3:53057606-53057625 | MS.gene34569:intron | 45.0% | |
GGGATGATGACTATGAAAGC+AGG | - | chr6.3:53056429-53056448 | MS.gene34569:CDS | 45.0% | |
GGTCATCAGATTGTGACATG+AGG | + | chr6.3:53059335-53059354 | None:intergenic | 45.0% | |
GTCTATACCTGCAAGACTCA+TGG | - | chr6.3:53060300-53060319 | MS.gene34569:intron | 45.0% | |
GTCTGTAATATGTTCGGGGT+GGG | - | chr6.3:53056699-53056718 | MS.gene34569:CDS | 45.0% | |
TAACCAATGGACGATAGGCT+TGG | + | chr6.3:53059242-53059261 | None:intergenic | 45.0% | |
TATCAGTCCATGAGTCTTGC+AGG | + | chr6.3:53060310-53060329 | None:intergenic | 45.0% | |
TATTGTCGAACCGGCACTAA+TGG | + | chr6.3:53058457-53058476 | None:intergenic | 45.0% | |
TCCTCCAAAATACAGCCAGA+AGG | + | chr6.3:53058598-53058617 | None:intergenic | 45.0% | |
TCTCCCATACCAAATCCCAT+CGG | + | chr6.3:53057777-53057796 | None:intergenic | 45.0% | |
TGCCAGACTGAAAGAGGAAT+TGG | - | chr6.3:53057605-53057624 | MS.gene34569:intron | 45.0% | |
TGTCTGTAATATGTTCGGGG+TGG | - | chr6.3:53056698-53056717 | MS.gene34569:CDS | 45.0% | |
TGTGGAAACGATGTTGGATG+CGG | - | chr6.3:53058100-53058119 | MS.gene34569:intron | 45.0% | |
TTGAATGTGACCACATGTGC+TGG | - | chr6.3:53059442-53059461 | MS.gene34569:CDS | 45.0% | |
TTGTGACATGAGGACAGCAA+GGG | + | chr6.3:53059325-53059344 | None:intergenic | 45.0% | |
! | AGGTCTTGTGGAAACGATGT+TGG | - | chr6.3:53058094-53058113 | MS.gene34569:intron | 45.0% |
! | ATGGGATTTGGTATGGGAGA+CGG | - | chr6.3:53057777-53057796 | MS.gene34569:CDS | 45.0% |
! | CATTTTCAACCCTAAGCTGG+TGG | + | chr6.3:53057587-53057606 | None:intergenic | 45.0% |
! | TAAGTGCTGCAACTTCTGTG+TGG | - | chr6.3:53059766-53059785 | MS.gene34569:intron | 45.0% |
! | TCTGGCTTCGAACTTGGTAT+GGG | - | chr6.3:53057708-53057727 | MS.gene34569:CDS | 45.0% |
! | TGGCATTTTCAACCCTAAGC+TGG | + | chr6.3:53057590-53057609 | None:intergenic | 45.0% |
! | TTGGTTCCTCTTTTGCCTTC+CGG | - | chr6.3:53060407-53060426 | MS.gene34569:intron | 45.0% |
! | TTTTCAGCCATGACTCCACA+TGG | - | chr6.3:53059576-53059595 | MS.gene34569:CDS | 45.0% |
!! | ATGCATTTGGTGCTCATCGA+TGG | - | chr6.3:53059271-53059290 | MS.gene34569:CDS | 45.0% |
!! | ATGGGAAGGAATGGTGTTGT+TGG | - | chr6.3:53057726-53057745 | MS.gene34569:CDS | 45.0% |
!! | CCAAATTCTGGCTTCGAACT+TGG | - | chr6.3:53057702-53057721 | MS.gene34569:CDS | 45.0% |
!! | GCTTCCTTCTGGCTGTATTT+TGG | - | chr6.3:53058591-53058610 | MS.gene34569:intron | 45.0% |
!! | GGTGTTTGATTTTCTCCGTG+AGG | - | chr6.3:53059809-53059828 | MS.gene34569:intron | 45.0% |
!! | TCCTTCTGGCTGTATTTTGG+AGG | - | chr6.3:53058594-53058613 | MS.gene34569:intron | 45.0% |
!! | TGCATTTGGTGCTCATCGAT+GGG | - | chr6.3:53059272-53059291 | MS.gene34569:CDS | 45.0% |
!! | TGGTTTGCTTGGAAGGTTGA+GGG | - | chr6.3:53056409-53056428 | MS.gene34569:CDS | 45.0% |
!! | TTCTGAGGCAGGAAAATGAG+AGG | - | chr6.3:53057463-53057482 | MS.gene34569:intron | 45.0% |
!! | TTCTGGCTTCGAACTTGGTA+TGG | - | chr6.3:53057707-53057726 | MS.gene34569:CDS | 45.0% |
ACCACTGATCACGATGTCCA+AGG | + | chr6.3:53060375-53060394 | None:intergenic | 50.0% | |
ACTTAGCACGATGCTCGAAG+TGG | + | chr6.3:53059751-53059770 | None:intergenic | 50.0% | |
AGACGGAGTTATGGGAGCTT+CGG | - | chr6.3:53057794-53057813 | MS.gene34569:CDS | 50.0% | |
AGTGCCTTCTCCATTAGTGC+CGG | - | chr6.3:53058444-53058463 | MS.gene34569:CDS | 50.0% | |
CAAGGGAATCACACTTCCTC+TGG | + | chr6.3:53059308-53059327 | None:intergenic | 50.0% | |
CAATTAGGACACACATGCCG+AGG | - | chr6.3:53060099-53060118 | MS.gene34569:intron | 50.0% | |
CACTTGCAAAGATCCACTCC+TGG | + | chr6.3:53058321-53058340 | None:intergenic | 50.0% | |
CAGGAGTGGATCTTTGCAAG+TGG | - | chr6.3:53058319-53058338 | MS.gene34569:intron | 50.0% | |
CGCCCATGTTACTAATGGGA+AGG | + | chr6.3:53059689-53059708 | None:intergenic | 50.0% | |
GAATCGCCGAACTCAGATGA+AGG | - | chr6.3:53057011-53057030 | MS.gene34569:intron | 50.0% | |
GAGGTGGTCCACATTGCTAA+AGG | - | chr6.3:53059882-53059901 | MS.gene34569:intron | 50.0% | |
GAGTGGGATGCTTTGTCCAA+TGG | - | chr6.3:53059846-53059865 | MS.gene34569:intron | 50.0% | |
GATCGGAAATAGTGCTCAGC+AGG | - | chr6.3:53057851-53057870 | MS.gene34569:intron | 50.0% | |
GATTGCTGGAGCTTCAACCT+TGG | - | chr6.3:53058268-53058287 | MS.gene34569:intron | 50.0% | |
GCCCAATTCCTCTTTCAGTC+TGG | + | chr6.3:53057610-53057629 | None:intergenic | 50.0% | |
GCTGATCATCAGCAGCATCA+AGG | + | chr6.3:53056493-53056512 | None:intergenic | 50.0% | |
GCTTCGAACTTGGTATGGGA+AGG | - | chr6.3:53057712-53057731 | MS.gene34569:CDS | 50.0% | |
GGAACTTCAAGTGACGGTAG+CGG | - | chr6.3:53060476-53060495 | MS.gene34569:CDS | 50.0% | |
GGAATGAATGGAACCAGGAG+TGG | - | chr6.3:53058305-53058324 | MS.gene34569:intron | 50.0% | |
GGTATGGGAGACGGAGTTAT+GGG | - | chr6.3:53057786-53057805 | MS.gene34569:CDS | 50.0% | |
GTATCTGACACCAGCACATG+TGG | + | chr6.3:53059455-53059474 | None:intergenic | 50.0% | |
GTGAATCCGACTGGAAACGA+GGG | - | chr6.3:53060272-53060291 | MS.gene34569:intron | 50.0% | |
GTTTAGGCTGTGAATCCGAC+TGG | - | chr6.3:53060263-53060282 | MS.gene34569:intron | 50.0% | |
TAATATGTTCGGGGTGGGCA+TGG | - | chr6.3:53056704-53056723 | MS.gene34569:CDS | 50.0% | |
TCACAATCTGATGACCCCAC+AGG | - | chr6.3:53059339-53059358 | MS.gene34569:CDS | 50.0% | |
TCCTCCGGTGAAAATTGTCC+AGG | + | chr6.3:53057564-53057583 | None:intergenic | 50.0% | |
TCCTTGGACATCGTGATCAG+TGG | - | chr6.3:53060371-53060390 | MS.gene34569:intron | 50.0% | |
TGATCTTGCAGGAGCTGCTA+TGG | - | chr6.3:53057890-53057909 | MS.gene34569:intron | 50.0% | |
TGGGATGCTTTGTCCAATGG+TGG | - | chr6.3:53059849-53059868 | MS.gene34569:intron | 50.0% | |
TGGTATGGGAGACGGAGTTA+TGG | - | chr6.3:53057785-53057804 | MS.gene34569:CDS | 50.0% | |
TGTGAATCCGACTGGAAACG+AGG | - | chr6.3:53060271-53060290 | MS.gene34569:intron | 50.0% | |
TGTGGGTCAAGGTAGACACT+CGG | + | chr6.3:53057632-53057651 | None:intergenic | 50.0% | |
TTCAACATGTCGCTGCCGAT+GGG | - | chr6.3:53057759-53057778 | MS.gene34569:CDS | 50.0% | |
TTGGACATCGTGATCAGTGG+TGG | - | chr6.3:53060374-53060393 | MS.gene34569:intron | 50.0% | |
TTTCAACATGTCGCTGCCGA+TGG | - | chr6.3:53057758-53057777 | MS.gene34569:CDS | 50.0% | |
TTTGCAAAGCAGCATGTCGG+AGG | - | chr6.3:53058490-53058509 | MS.gene34569:CDS | 50.0% | |
! | CAGTGGTGGAGAGTCTTCAT+TGG | - | chr6.3:53060388-53060407 | MS.gene34569:intron | 50.0% |
! | CTGCCGATGGGATTTGGTAT+GGG | - | chr6.3:53057771-53057790 | MS.gene34569:CDS | 50.0% |
! | GACTCATGGACTGATAGCTC+TGG | - | chr6.3:53060314-53060333 | MS.gene34569:intron | 50.0% |
! | GGTGGATGCTTGCTGACATT+TGG | - | chr6.3:53060524-53060543 | MS.gene34569:CDS | 50.0% |
! | TCCTGGACAATTTTCACCGG+AGG | - | chr6.3:53057560-53057579 | MS.gene34569:intron | 50.0% |
! | TGGTTTTCAGATGCAAGCCG+AGG | - | chr6.3:53058417-53058436 | MS.gene34569:CDS | 50.0% |
!! | CATGCTGCTTTGCAAACCTG+AGG | + | chr6.3:53058486-53058505 | None:intergenic | 50.0% |
!! | CTGGTTTGCTTGGAAGGTTG+AGG | - | chr6.3:53056408-53056427 | MS.gene34569:CDS | 50.0% |
!! | GACTGATAGCTCTGGCTCAA+TGG | - | chr6.3:53060322-53060341 | MS.gene34569:intron | 50.0% |
!! | TGGAGAAGGCACTTGAACCT+CGG | + | chr6.3:53058437-53058456 | None:intergenic | 50.0% |
AACACCCTTTGCCGAGGCAA+CGG | + | chr6.3:53059795-53059814 | None:intergenic | 55.0% | |
ACGATGCTCGAAGTGGCATC+TGG | + | chr6.3:53059744-53059763 | None:intergenic | 55.0% | |
AGGCAAATGCCGAGACTGGT+CGG | + | chr6.3:53057665-53057684 | None:intergenic | 55.0% | |
ATGGAGGCAAATGCCGAGAC+TGG | + | chr6.3:53057669-53057688 | None:intergenic | 55.0% | |
ATGTCGCTGCCGATGGGATT+TGG | - | chr6.3:53057765-53057784 | MS.gene34569:CDS | 55.0% | |
ATGTGGACCACCTCCTGCAT+TGG | + | chr6.3:53059876-53059895 | None:intergenic | 55.0% | |
CCAATGGACGATAGGCTTGG+TGG | + | chr6.3:53059239-53059258 | None:intergenic | 55.0% | |
CCACCAAGCCTATCGTCCAT+TGG | - | chr6.3:53059236-53059255 | MS.gene34569:CDS | 55.0% | |
CCACCGCAATTGCTGCATGT+CGG | + | chr6.3:53057531-53057550 | None:intergenic | 55.0% | |
CGAACCGGCACTAATGGAGA+AGG | + | chr6.3:53058451-53058470 | None:intergenic | 55.0% | |
CTGCTTCCCTCGTTTCCAGT+CGG | + | chr6.3:53060281-53060300 | None:intergenic | 55.0% | |
CTGTGTGGATTCCGTTGCCT+CGG | - | chr6.3:53059781-53059800 | MS.gene34569:intron | 55.0% | |
GATTCCGTTGCCTCGGCAAA+GGG | - | chr6.3:53059788-53059807 | MS.gene34569:intron | 55.0% | |
GCCGAAGAACTTGTGGGTCA+AGG | + | chr6.3:53057643-53057662 | None:intergenic | 55.0% | |
GTCGGCCGTAATGCTGCTAA+TGG | - | chr6.3:53058544-53058563 | MS.gene34569:CDS | 55.0% | |
TCCTTCGAGTGCGTGCAAGT+GGG | - | chr6.3:53059659-53059678 | MS.gene34569:intron | 55.0% | |
TGGTCGGCCGAAGAACTTGT+GGG | + | chr6.3:53057649-53057668 | None:intergenic | 55.0% | |
! | ACTTCAAGTGACGGTAGCGG+CGG | - | chr6.3:53060479-53060498 | MS.gene34569:CDS | 55.0% |
! | CTCCTGCATTGGTCCACCAT+TGG | + | chr6.3:53059865-53059884 | None:intergenic | 55.0% |
! | GCTGCCGATGGGATTTGGTA+TGG | - | chr6.3:53057770-53057789 | MS.gene34569:CDS | 55.0% |
!! | AGCAGCATGTCGGAGGCATT+TGG | - | chr6.3:53058497-53058516 | MS.gene34569:CDS | 55.0% |
!! | CAATGGTGGACCAATGCAGG+AGG | - | chr6.3:53059863-53059882 | MS.gene34569:intron | 55.0% |
!! | GATGGGTTGCAACTCTCCAG+AGG | - | chr6.3:53059289-53059308 | MS.gene34569:CDS | 55.0% |
!! | GCAGCATGTCGGAGGCATTT+GGG | - | chr6.3:53058498-53058517 | MS.gene34569:CDS | 55.0% |
!! | GTCCAATGGTGGACCAATGC+AGG | - | chr6.3:53059860-53059879 | MS.gene34569:intron | 55.0% |
!! | TGTCGGAGGCATTTGGGTTG+TGG | - | chr6.3:53058504-53058523 | MS.gene34569:CDS | 55.0% |
AATGGCGAGGGCGGAGACAA+TGG | - | chr6.3:53060503-53060522 | MS.gene34569:CDS | 60.0% | |
ACCCTAAGCTGGTGGTCCTC+CGG | + | chr6.3:53057579-53057598 | None:intergenic | 60.0% | |
ACCGGAGGACCACCAGCTTA+GGG | - | chr6.3:53057575-53057594 | MS.gene34569:intron | 60.0% | |
AGGCACAGATGAGAGGCGAG+TGG | - | chr6.3:53059829-53059848 | MS.gene34569:intron | 60.0% | |
CCGACATGCAGCAATTGCGG+TGG | - | chr6.3:53057528-53057547 | MS.gene34569:intron | 60.0% | |
CGCCTCTCATCTGTGCCTCA+CGG | + | chr6.3:53059827-53059846 | None:intergenic | 60.0% | |
CTCAGCCGGATTCTCCTCTC+TGG | - | chr6.3:53057931-53057950 | MS.gene34569:intron | 60.0% | |
CTCCGTGAGGCACAGATGAG+AGG | - | chr6.3:53059822-53059841 | MS.gene34569:intron | 60.0% | |
CTGGTCGGCCGAAGAACTTG+TGG | + | chr6.3:53057650-53057669 | None:intergenic | 60.0% | |
GGAGCTTCGGCGCTACAATC+TGG | - | chr6.3:53057807-53057826 | MS.gene34569:CDS | 60.0% | |
GGATTCCGTTGCCTCGGCAA+AGG | - | chr6.3:53059787-53059806 | MS.gene34569:intron | 60.0% | |
GGCACAGATGAGAGGCGAGT+GGG | - | chr6.3:53059830-53059849 | MS.gene34569:intron | 60.0% | |
GTCCTTCGAGTGCGTGCAAG+TGG | - | chr6.3:53059658-53059677 | MS.gene34569:intron | 60.0% | |
GTTCTTCGGCCGACCAGTCT+CGG | - | chr6.3:53057653-53057672 | MS.gene34569:intron | 60.0% | |
TCCCACTTGCACGCACTCGA+AGG | + | chr6.3:53059663-53059682 | None:intergenic | 60.0% | |
TGTTCGGGGTGGGCATGGTT+CGG | - | chr6.3:53056709-53056728 | MS.gene34569:CDS | 60.0% | |
! | TGGTGGACCAATGCAGGAGG+TGG | - | chr6.3:53059866-53059885 | MS.gene34569:intron | 60.0% |
CACCGGAGGACCACCAGCTT+AGG | - | chr6.3:53057574-53057593 | MS.gene34569:intron | 65.0% | |
GCATGCTGAAGCTCGCGCAG+AGG | - | chr6.3:53059607-53059626 | MS.gene34569:intron | 65.0% | |
TGCGGTGGCCCAGCAATTCC+TGG | - | chr6.3:53057543-53057562 | MS.gene34569:intron | 65.0% | |
! | AGTGACGGTAGCGGCGGCAA+TGG | - | chr6.3:53060485-53060504 | MS.gene34569:CDS | 65.0% |
!! | GGGGTGGGCATGGTTCGGTT+CGG | - | chr6.3:53056714-53056733 | MS.gene34569:CDS | 65.0% |
!! | GGGTGGGCATGGTTCGGTTC+GGG | - | chr6.3:53056715-53056734 | MS.gene34569:CDS | 65.0% |
GGCGAGGGCGGAGACAATGG+TGG | - | chr6.3:53060506-53060525 | MS.gene34569:CDS | 70.0% | |
! | GGTAGCGGCGGCAATGGCGA+GGG | - | chr6.3:53060491-53060510 | MS.gene34569:CDS | 70.0% |
AGCGGCGGCAATGGCGAGGG+CGG | - | chr6.3:53060494-53060513 | MS.gene34569:CDS | 75.0% | |
! | CGGTAGCGGCGGCAATGGCG+AGG | - | chr6.3:53060490-53060509 | MS.gene34569:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 53056362 | 53060670 | 53056362 | ID=MS.gene34569 |
chr6.3 | mRNA | 53056362 | 53060670 | 53056362 | ID=MS.gene34569.t1;Parent=MS.gene34569 |
chr6.3 | exon | 53060456 | 53060670 | 53060456 | ID=MS.gene34569.t1.exon1;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53060456 | 53060670 | 53060456 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53060000 | 53060117 | 53060000 | ID=MS.gene34569.t1.exon2;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53060000 | 53060117 | 53060000 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53058911 | 53059597 | 53058911 | ID=MS.gene34569.t1.exon3;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53058911 | 53059597 | 53058911 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53058692 | 53058793 | 53058692 | ID=MS.gene34569.t1.exon4;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53058692 | 53058793 | 53058692 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53058393 | 53058605 | 53058393 | ID=MS.gene34569.t1.exon5;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53058393 | 53058605 | 53058393 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53057672 | 53057837 | 53057672 | ID=MS.gene34569.t1.exon6;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53057672 | 53057837 | 53057672 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53057085 | 53057449 | 53057085 | ID=MS.gene34569.t1.exon7;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53057085 | 53057449 | 53057085 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
chr6.3 | exon | 53056362 | 53056763 | 53056362 | ID=MS.gene34569.t1.exon8;Parent=MS.gene34569.t1 |
chr6.3 | CDS | 53056362 | 53056763 | 53056362 | ID=cds.MS.gene34569.t1;Parent=MS.gene34569.t1 |
Gene Sequence |
Protein sequence |