AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34809

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34809.t1 MTR_0091s0080 33.883 546 245 7 43 573 28 472 8.15e-107 330
MS.gene34809.t1 MTR_0091s0090 42.512 207 118 1 359 565 4 209 4.74e-55 187
MS.gene34809.t1 MTR_0091s0090 36.946 203 125 1 91 290 3 205 5.16e-40 147
MS.gene34809.t1 MTR_1g052720 34.470 264 146 6 43 283 36 295 8.96e-49 172
MS.gene34809.t1 MTR_1g052720 34.432 273 161 4 308 566 34 302 1.58e-47 168
MS.gene34809.t1 MTR_6g465600 35.714 238 138 4 44 267 40 276 3.32e-44 159
MS.gene34809.t1 MTR_6g465600 36.694 248 142 4 300 533 28 274 3.49e-44 159
MS.gene34809.t1 MTR_0246s0040 34.091 264 156 7 317 579 72 318 1.77e-34 133
MS.gene34809.t1 MTR_0246s0040 33.028 218 133 3 50 267 72 276 1.23e-32 128
MS.gene34809.t1 MTR_1g105780 29.437 231 150 2 49 267 40 269 1.57e-29 118
MS.gene34809.t1 MTR_1g105780 29.302 215 140 2 314 517 38 251 4.79e-26 108
MS.gene34809.t1 MTR_1g105765 29.004 231 151 2 49 267 40 269 4.20e-29 117
MS.gene34809.t1 MTR_1g105765 29.767 215 139 2 314 517 38 251 2.51e-26 108
MS.gene34809.t1 MTR_7g110090 28.632 234 154 2 49 270 39 271 4.90e-29 116
MS.gene34809.t1 MTR_7g110090 27.490 251 165 5 300 536 22 269 5.61e-24 102
MS.gene34809.t1 MTR_3g070250 29.707 239 150 2 49 270 44 281 1.27e-26 110
MS.gene34809.t1 MTR_3g070250 28.512 242 151 6 299 521 26 264 7.61e-20 90.5
MS.gene34809.t1 MTR_4g032560 29.060 234 153 2 49 270 68 300 8.36e-26 108
MS.gene34809.t1 MTR_4g032560 27.881 269 180 5 277 532 28 295 1.01e-21 96.3
MS.gene34809.t1 MTR_1g084880 29.289 239 151 2 49 270 39 276 1.00e-25 107
MS.gene34809.t1 MTR_1g084880 27.511 229 145 3 314 524 37 262 1.50e-18 86.7
MS.gene34809.t1 MTR_3g048970 28.870 239 152 2 49 270 39 276 2.43e-25 106
MS.gene34809.t1 MTR_3g048970 27.948 229 144 4 314 524 37 262 1.28e-18 86.7
MS.gene34809.t1 MTR_4g032580 28.632 234 154 2 49 270 68 300 3.79e-25 106
MS.gene34809.t1 MTR_4g032580 27.881 269 180 5 277 532 28 295 9.35e-22 96.3
MS.gene34809.t1 MTR_3g085990 29.730 222 130 4 49 270 40 235 6.80e-25 103
MS.gene34809.t1 MTR_3g085990 26.316 228 140 6 298 524 21 221 2.64e-15 76.3
MS.gene34809.t1 MTR_1g023840 40.594 101 60 0 434 534 10 110 7.89e-22 92.0
MS.gene34809.t1 MTR_1g023840 44.681 94 52 0 169 262 13 106 1.28e-21 91.7
MS.gene34809.t1 MTR_7g050355 26.022 269 133 3 300 567 28 231 2.99e-21 98.2
MS.gene34809.t1 MTR_1g047540 26.840 231 147 5 49 270 39 256 4.65e-19 90.9
MS.gene34809.t1 MTR_1g047540 27.530 247 155 8 300 536 22 254 8.27e-17 84.0
MS.gene34809.t1 MTR_4g062370 27.165 254 163 6 273 514 8 251 4.73e-19 91.7
MS.gene34809.t1 MTR_4g062370 27.854 219 141 4 49 253 43 258 1.94e-18 89.7
MS.gene34809.t1 MTR_2g100360 25.792 221 142 3 48 249 38 255 4.02e-18 85.1
MS.gene34809.t1 MTR_2g100360 25.221 226 152 3 314 523 37 261 4.23e-16 79.3
MS.gene34809.t1 MTR_5g066660 26.210 248 162 6 50 295 40 268 5.01e-18 85.1
MS.gene34809.t1 MTR_5g066660 26.484 219 140 5 314 530 37 236 1.39e-12 68.9
MS.gene34809.t1 MTR_2g038740 28.272 191 120 1 49 222 39 229 1.38e-17 87.0
MS.gene34809.t1 MTR_2g038740 27.413 259 160 5 314 545 37 294 1.83e-17 86.7
MS.gene34809.t1 MTR_8g064960 41.892 74 42 1 189 262 27 99 2.32e-17 78.6
MS.gene34809.t1 MTR_8g064930 67.347 49 16 0 322 370 2 50 4.70e-17 75.5
MS.gene34809.t1 MTR_3g452180 26.374 182 121 2 101 270 7 187 6.58e-17 79.7
MS.gene34809.t1 MTR_3g452180 25.824 182 119 4 368 536 7 185 7.00e-14 70.9
MS.gene34809.t1 MTR_4g117740 28.571 154 93 2 60 213 61 197 1.49e-16 79.0
MS.gene34809.t1 MTR_4g117740 27.891 147 88 2 331 477 65 193 1.44e-13 70.1
MS.gene34809.t1 MTR_1g087870 25.000 240 153 6 64 282 2 235 5.74e-16 78.6
MS.gene34809.t1 MTR_1g087870 25.114 219 147 4 331 533 2 219 7.40e-16 78.2
MS.gene34809.t1 MTR_6g033605 37.349 83 51 1 189 270 30 112 1.99e-14 70.1
MS.gene34809.t1 MTR_6g033605 32.927 82 54 1 457 537 30 111 1.53e-12 64.7
MS.gene34809.t1 MTR_0521s0010 26.519 181 102 2 50 213 34 200 1.76e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 153 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTGTGGCAAGGATTTC+TGG 0.139608 5.4:+51733769 None:intergenic
AAACTGGACCGTCGTGATTT+TGG 0.142859 5.4:-51735469 MS.gene34809:CDS
CAATCCAGCCTTGTTTCTTA+TGG 0.243933 5.4:+51734052 None:intergenic
CGGTCCAGTTTGGATATTAT+TGG 0.264347 5.4:+51735481 None:intergenic
ATCCATGGGTGCAGTGTATT+GGG 0.290852 5.4:+51733544 None:intergenic
CATTAGACATTGCCGTGGTT+TGG 0.309583 5.4:-51735273 MS.gene34809:intron
AAGGAGCAGATCACAATATT+AGG 0.318102 5.4:+51736032 None:intergenic
CTCATCATTGCCATCTCACT+TGG 0.320277 5.4:+51735915 None:intergenic
TGTCACGCTGAATGAACTTT+AGG 0.324413 5.4:+51735172 None:intergenic
ACAAATGCAGATTTGATTAG+AGG 0.328195 5.4:-51735006 MS.gene34809:CDS
ATTAGACATTGCCGTGGTTT+GGG 0.336423 5.4:-51735272 MS.gene34809:intron
CCGAGGTTCATTACTTCATC+AGG 0.337428 5.4:-51733990 MS.gene34809:CDS
GATATATCGGATAATGGATA+TGG 0.364913 5.4:+51734023 None:intergenic
CCTACCACACTTACGATTGT+TGG 0.366401 5.4:-51733747 MS.gene34809:CDS
ACCTCTGCGATGTGCAAATC+AGG 0.368835 5.4:+51733640 None:intergenic
ATCGTCAAGGTCATAAGATT+TGG 0.374229 5.4:+51735550 None:intergenic
ACATCGCAGAGGTTGGTTGC+AGG 0.375369 5.4:-51733630 MS.gene34809:CDS
ACAACAATGATATTGTTGTT+TGG 0.386359 5.4:+51734203 None:intergenic
ACCTCAATCTCATTGTTCAT+TGG 0.386489 5.4:+51735682 None:intergenic
GATATTTATAACATTGTAGA+TGG 0.391221 5.4:-51734122 MS.gene34809:CDS
GACTTCGTCTGATGTCCTCT+CGG 0.399084 5.4:-51733922 MS.gene34809:CDS
TATCCATGGGTGCAGTGTAT+TGG 0.399336 5.4:+51733543 None:intergenic
ACTTCAGACAAGGCTGGTCT+AGG 0.399428 5.4:-51734151 MS.gene34809:CDS
GCAAGGGATATATCGGATAA+TGG 0.403725 5.4:+51734017 None:intergenic
AAAATCACGACGGTCCAGTT+TGG 0.405460 5.4:+51735471 None:intergenic
ATGCTATGATTGGTGGTGAT+TGG 0.409098 5.4:-51733665 MS.gene34809:CDS
TACTCCAATAATATCCAAAC+TGG 0.412151 5.4:-51735485 MS.gene34809:CDS
GGATGTTAACTCAGGATGTT+TGG 0.412783 5.4:-51735395 MS.gene34809:intron
TGCATGCTGCAAATCAGCTT+TGG 0.415627 5.4:+51735984 None:intergenic
CATAAGAAACAAGGCTGGAT+TGG 0.419848 5.4:-51734051 MS.gene34809:CDS
AACCAGACTTTGCCGTGGTA+TGG 0.440028 5.4:-51733798 MS.gene34809:intron
CACTATTGAATTGACTTACT+CGG 0.440432 5.4:-51735416 MS.gene34809:CDS
TTGATTACGTTGGATTTGCC+TGG 0.442541 5.4:-51735203 MS.gene34809:CDS
GTGTACAATTGAAGGTGATT+GGG 0.443885 5.4:-51735139 MS.gene34809:CDS
AAACCTATGGTCAGCGGCAG+TGG 0.455398 5.4:-51733513 MS.gene34809:CDS
GAACTTTAGGTCACATCTCC+AGG 0.457339 5.4:+51735185 None:intergenic
ACTCCTATGTGTACAATTGA+AGG 0.457401 5.4:-51735147 MS.gene34809:CDS
CGGCAACGCAAGGGATATAT+CGG 0.461190 5.4:+51734010 None:intergenic
CAGACATAGTGTCAAATTCA+AGG 0.463743 5.4:+51735883 None:intergenic
GACAAAGATAACACAGTCCT+TGG 0.465488 5.4:-51733579 MS.gene34809:CDS
TGTGTACAATTGAAGGTGAT+TGG 0.473160 5.4:-51735140 MS.gene34809:CDS
TCATCATTGCCATCTCACTT+GGG 0.476104 5.4:+51735916 None:intergenic
TTCGATAGACCTTGCGGTCA+CGG 0.478744 5.4:-51735079 MS.gene34809:CDS
CTGTGCGAAGGGACCTGTCT+CGG 0.479542 5.4:-51734808 MS.gene34809:CDS
TAGGTTTCACATAGTATCCA+TGG 0.490660 5.4:+51733529 None:intergenic
ATGGTCATGAGTAGTAGATT+AGG 0.500878 5.4:+51734071 None:intergenic
TGGGTCTATCTGAAATATGC+GGG 0.502250 5.4:-51734095 MS.gene34809:CDS
TTGGTCCGAACGGCTGTACA+TGG 0.502745 5.4:-51733728 MS.gene34809:CDS
ACAGTGAGGTCCGTATTTAT+CGG 0.505137 5.4:+51735228 None:intergenic
GAAGGGACCTGTCTCGGTTG+AGG 0.505460 5.4:-51734802 MS.gene34809:CDS
GCTTCTATATTCTGTTTCCA+AGG 0.505945 5.4:-51734952 MS.gene34809:intron
TCTGCATTTGTAGACGGCAC+AGG 0.506847 5.4:+51735018 None:intergenic
GACTTCTACAACATTGAGCT+TGG 0.507615 5.4:-51735601 MS.gene34809:CDS
CCTTGCTTGAGTGTGGTCGT+TGG 0.508319 5.4:-51736013 MS.gene34809:CDS
TCACCACCAATCATAGCATA+AGG 0.511917 5.4:+51733669 None:intergenic
ACTTCGTCTGATGTCCTCTC+GGG 0.511997 5.4:-51733921 MS.gene34809:CDS
CATCTCCATGTACAGCCGTT+CGG 0.512529 5.4:+51733723 None:intergenic
GAGTATGCTGGAACAGATGT+CGG 0.514049 5.4:-51733442 MS.gene34809:CDS
AATATGCCTTATGCTATGAT+TGG 0.515256 5.4:-51733675 MS.gene34809:CDS
TCCAATGAACAATGAGATTG+AGG 0.518221 5.4:-51735683 MS.gene34809:CDS
AGCTTTATATGAGGAAAGGT+TGG 0.518511 5.4:-51735636 MS.gene34809:CDS
GATAAGTCCTCAACCGAGAC+AGG 0.525131 5.4:+51734795 None:intergenic
CGACCACTGCCGCTGACCAT+AGG 0.527761 5.4:+51733510 None:intergenic
ACCCCAATACACTGCACCCA+TGG 0.533195 5.4:-51733546 MS.gene34809:CDS
CAGTGGTCGATATGTGTACC+AGG 0.539166 5.4:-51733496 MS.gene34809:CDS
ATTATTGGAGTAGTGTGAGC+AGG 0.541688 5.4:+51735496 None:intergenic
TAATGAACCTCGGCAACGCA+AGG 0.541750 5.4:+51734000 None:intergenic
TGATGTCCTCTCGGGCACTT+TGG 0.543138 5.4:-51733913 MS.gene34809:intron
TTGCAAGGCGAAGAGTATGC+TGG 0.545573 5.4:-51733454 MS.gene34809:CDS
ATAACATTGTAGATGGTGCA+TGG 0.547247 5.4:-51734115 MS.gene34809:CDS
CGAGGTTCATTACTTCATCA+GGG 0.547766 5.4:-51733989 MS.gene34809:CDS
CATATTATTTGCAACAGCGA+AGG 0.553325 5.4:+51733692 None:intergenic
CTTCAGACAAGGCTGGTCTA+GGG 0.553757 5.4:-51734150 MS.gene34809:CDS
CGTGTTACCTCCGATAAATA+CGG 0.556373 5.4:-51735238 MS.gene34809:CDS
AACGACCTTCGACAAACCTA+CGG 0.556786 5.4:+51735100 None:intergenic
AGTATGCTGGAACAGATGTC+GGG 0.557360 5.4:-51733441 MS.gene34809:CDS
CTTACGATTGTTGGTCCGAA+CGG 0.558198 5.4:-51733738 MS.gene34809:CDS
CTCACTGTCATTGATTACGT+TGG 0.558362 5.4:-51735213 MS.gene34809:CDS
TATATGAGGAAAGGTTGGTA+TGG 0.559929 5.4:-51735631 MS.gene34809:CDS
GATTTGCACATCGCAGAGGT+TGG 0.560790 5.4:-51733637 MS.gene34809:CDS
GGACTGTGTTATCTTTGTCA+TGG 0.561082 5.4:+51733583 None:intergenic
TCTTCTCCTCCGTGACCGCA+AGG 0.561112 5.4:+51735070 None:intergenic
TGGATACTATGTGAAACCTA+TGG 0.563204 5.4:-51733526 MS.gene34809:CDS
TCAGACTGCAATATGAACCT+TGG 0.563823 5.4:+51734976 None:intergenic
TGCAGTGTATTGGGGTATGT+CGG 0.565836 5.4:+51733553 None:intergenic
CTGCATTTGTAGACGGCACA+GGG 0.566431 5.4:+51735019 None:intergenic
TGATTAGAGGCATTGATCCA+AGG 0.567311 5.4:-51734993 MS.gene34809:CDS
ATATATCCCTTGCGTTGCCG+AGG 0.568869 5.4:-51734007 MS.gene34809:CDS
TGTGGTAGGTTTCTGTGGCA+AGG 0.569531 5.4:+51733761 None:intergenic
GACAAGCTTTATATGAGGAA+AGG 0.570103 5.4:-51735640 MS.gene34809:CDS
ATCTCACTTGGGGTATACGT+TGG 0.570410 5.4:+51735927 None:intergenic
TAACATTGTAGATGGTGCAT+GGG 0.570614 5.4:-51734114 MS.gene34809:CDS
ACTTACTCGGATGTTAACTC+AGG 0.572912 5.4:-51735403 MS.gene34809:CDS
GAAAGGTTGGTATGGACTGA+AGG 0.575278 5.4:-51735623 MS.gene34809:CDS
GAGGCGACAAGCTTTATATG+AGG 0.576586 5.4:-51735645 MS.gene34809:CDS
ACAAGGCTGGTCTAGGGTGA+AGG 0.576887 5.4:-51734144 MS.gene34809:CDS
CATCATTGCCATCTCACTTG+GGG 0.579124 5.4:+51735917 None:intergenic
AACGTATACCCCAAGTGAGA+TGG 0.579805 5.4:-51735925 MS.gene34809:CDS
AAATCTGTTGTTGATCGTCA+AGG 0.579813 5.4:+51735537 None:intergenic
ACAACATTGAGCTTGGTGCA+TGG 0.580204 5.4:-51735594 MS.gene34809:CDS
CCAACAATCGTAAGTGTGGT+AGG 0.580385 5.4:+51733747 None:intergenic
CGAGACAGGTCCCTTCGCAC+AGG 0.583465 5.4:+51734809 None:intergenic
ACGACCTTCGACAAACCTAC+GGG 0.584033 5.4:+51735101 None:intergenic
AGGTCTACTTCAGACAAGGC+TGG 0.585540 5.4:-51734157 MS.gene34809:CDS
ATCTGCTCCTTGCTTGAGTG+TGG 0.585624 5.4:-51736020 MS.gene34809:CDS
ATCAAATCTGCATTTGTAGA+CGG 0.590289 5.4:+51735012 None:intergenic
GCATGAAAATGTTGTAGGTG+GGG 0.592686 5.4:-51735964 MS.gene34809:CDS
TCACTATCTCAAATATTGCA+AGG 0.596203 5.4:-51733469 MS.gene34809:CDS
TGCATGAAAATGTTGTAGGT+GGG 0.596497 5.4:-51735965 MS.gene34809:CDS
ATGACCATAAGAAACAAGGC+TGG 0.597597 5.4:-51734056 MS.gene34809:CDS
CGACCTCGATCCTGTGCGAA+GGG 0.601460 5.4:-51734819 MS.gene34809:CDS
ATGCCTTATGCTATGATTGG+TGG 0.601798 5.4:-51733672 MS.gene34809:CDS
TTGGGGTATGTCGGAAACCA+AGG 0.606539 5.4:+51733562 None:intergenic
AATGAACCTCGGCAACGCAA+GGG 0.607154 5.4:+51734001 None:intergenic
AGCATGCATGAAAATGTTGT+AGG 0.609002 5.4:-51735969 MS.gene34809:CDS
TGTACAATTGAAGGTGATTG+GGG 0.612279 5.4:-51735138 MS.gene34809:CDS
GTAAGTGTGGTAGGTTTCTG+TGG 0.617237 5.4:+51733756 None:intergenic
CCAACGACCACACTCAAGCA+AGG 0.618711 5.4:+51736013 None:intergenic
GAGCAGATCACAATATTAGG+AGG 0.621127 5.4:+51736035 None:intergenic
AGGTTTCACATAGTATCCAT+GGG 0.622147 5.4:+51733530 None:intergenic
CAACAGCGAACTTAACTGCA+TGG 0.624703 5.4:+51733607 None:intergenic
CATGAAAATGTTGTAGGTGG+GGG 0.624750 5.4:-51735963 MS.gene34809:CDS
TCCATGGGTGCAGTGTATTG+GGG 0.627336 5.4:+51733545 None:intergenic
ATGCATGAAAATGTTGTAGG+TGG 0.627822 5.4:-51735966 MS.gene34809:CDS
ACCTGATTTGCACATCGCAG+AGG 0.634639 5.4:-51733641 MS.gene34809:CDS
GGACAATATGTAAGGCCCGT+AGG 0.636455 5.4:-51735116 MS.gene34809:CDS
TCACCTTCAATTGTACACAT+AGG 0.636668 5.4:+51735144 None:intergenic
ATGGGTCTATCTGAAATATG+CGG 0.636801 5.4:-51734096 MS.gene34809:CDS
ACGACCTCGATCCTGTGCGA+AGG 0.639634 5.4:-51734820 MS.gene34809:CDS
ATCTGCATTAGACATTGCCG+TGG 0.643012 5.4:-51735278 MS.gene34809:intron
GGTCCCTTCGCACAGGATCG+AGG 0.647508 5.4:+51734816 None:intergenic
TTCTGGCAGAAGCCATACCA+CGG 0.648051 5.4:+51733786 None:intergenic
GGCAAGGTCTACTTCAGACA+AGG 0.649008 5.4:-51734161 MS.gene34809:CDS
CCTGATGAAGTAATGAACCT+CGG 0.649312 5.4:+51733990 None:intergenic
CGCTTACAGAACCCAAACCA+CGG 0.655051 5.4:+51735261 None:intergenic
TTATTTAGCAGTTAAAGGCG+AGG 0.655685 5.4:-51734289 MS.gene34809:intron
GAGGTTCATTACTTCATCAG+GGG 0.659487 5.4:-51733988 MS.gene34809:CDS
CAAGTGAGATGGCAATGATG+AGG 0.660753 5.4:-51735914 MS.gene34809:CDS
ACTCATGACCATAAGAAACA+AGG 0.663177 5.4:-51734060 MS.gene34809:CDS
TCAAAATCTTGACAGATGTG+CGG 0.663839 5.4:+51733943 None:intergenic
CGGACCAACAATCGTAAGTG+TGG 0.667344 5.4:+51733743 None:intergenic
ATTTGAGATAGTGATTGACC+TGG 0.673697 5.4:+51733478 None:intergenic
GGGTCTATCTGAAATATGCG+GGG 0.673953 5.4:-51734094 MS.gene34809:CDS
TATATACCAAAGTGCCCGAG+AGG 0.678235 5.4:+51733907 None:intergenic
AAGGCCCGTAGGTTTGTCGA+AGG 0.678246 5.4:-51735105 MS.gene34809:CDS
TGTTTAACCAGACTTTGCCG+TGG 0.679547 5.4:-51733803 MS.gene34809:intron
GTGAGGTCCGTATTTATCGG+AGG 0.693002 5.4:+51735231 None:intergenic
AGGTCGTTCGATAGACCTTG+CGG 0.706168 5.4:-51735085 MS.gene34809:CDS
TATGTGAAACCTATGGTCAG+CGG 0.713139 5.4:-51733519 MS.gene34809:CDS
GAGGTTCGACTGTATCGCAG+AGG 0.730544 5.4:-51735664 MS.gene34809:CDS
CAACGTAATCAATGACAGTG+AGG 0.734984 5.4:+51735214 None:intergenic
GATAGACCTTGCGGTCACGG+AGG 0.760484 5.4:-51735076 MS.gene34809:CDS
GTACAATTGAAGGTGATTGG+GGG 0.819509 5.4:-51735137 MS.gene34809:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACCATATAAATTCAT+TGG + chr5.4:51734619-51734638 None:intergenic 15.0%
!! GGTTAATATAATTAGATATT+TGG - chr5.4:51735604-51735623 MS.gene34809:CDS 15.0%
!! TACATTCTAATTTGAATATA+TGG - chr5.4:51734859-51734878 MS.gene34809:intron 15.0%
!!! TATGTTAACATTTTCTATTA+TGG - chr5.4:51735134-51735153 MS.gene34809:CDS 15.0%
!! AGAAATAAACAATAACACAA+CGG + chr5.4:51734132-51734151 None:intergenic 20.0%
!! ATGTTAACATAAATTTATGC+CGG + chr5.4:51735125-51735144 None:intergenic 20.0%
!! GATATTTATAACATTGTAGA+TGG - chr5.4:51735353-51735372 MS.gene34809:intron 20.0%
!!! AACTAACGTACAAATTTTTT+CGG + chr5.4:51735024-51735043 None:intergenic 20.0%
! ATTTCGTTCATTCGATTATA+AGG - chr5.4:51735629-51735648 MS.gene34809:CDS 25.0%
! GTTTCCTATCTAATATCATA+AGG - chr5.4:51735156-51735175 MS.gene34809:CDS 25.0%
! TTAGCATCAAACACATTTAT+TGG + chr5.4:51733677-51733696 None:intergenic 25.0%
! TTTCTGTTTGTGTTTAGTAA+CGG - chr5.4:51734161-51734180 MS.gene34809:CDS 25.0%
!! AAATTTTCACGACAACAATA+AGG - chr5.4:51734832-51734851 MS.gene34809:CDS 25.0%
!! ACAACAATGATATTGTTGTT+TGG + chr5.4:51735275-51735294 None:intergenic 25.0%
!! GGTATATAATTTGCACTAAT+TGG - chr5.4:51735583-51735602 MS.gene34809:CDS 25.0%
!! TATATGTTGTTTATTCTGTC+CGG - chr5.4:51734573-51734592 MS.gene34809:intron 25.0%
AACAACATATACTTCAGTTC+AGG + chr5.4:51734564-51734583 None:intergenic 30.0%
AAGGTTATCTTACTGTTTGT+TGG - chr5.4:51735648-51735667 MS.gene34809:CDS 30.0%
AATATGCCTTATGCTATGAT+TGG - chr5.4:51735800-51735819 MS.gene34809:intron 30.0%
ACAAATGCAGATTTGATTAG+AGG - chr5.4:51734469-51734488 MS.gene34809:intron 30.0%
ACAACATATACTTCAGTTCA+GGG + chr5.4:51734563-51734582 None:intergenic 30.0%
ACGAATAACAATCAAATTGC+CGG + chr5.4:51734595-51734614 None:intergenic 30.0%
AGTTATCATAAACTCTGTCT+AGG - chr5.4:51734981-51735000 MS.gene34809:CDS 30.0%
ATCAAATCTGCATTTGTAGA+CGG + chr5.4:51734466-51734485 None:intergenic 30.0%
CACACCTTATGATATTAGAT+AGG + chr5.4:51735163-51735182 None:intergenic 30.0%
CAGATATACTTTCTTATGTC+CGG - chr5.4:51735103-51735122 MS.gene34809:CDS 30.0%
GTTGAAGTTCAGAAAAAGAA+TGG - chr5.4:51735293-51735312 MS.gene34809:intron 30.0%
TACTCCAATAATATCCAAAC+TGG - chr5.4:51733990-51734009 MS.gene34809:CDS 30.0%
TAGTCTTTCAAAAAGCAGTT+AGG + chr5.4:51733736-51733755 None:intergenic 30.0%
TATGTCCTCATCTATTAGAA+TGG + chr5.4:51733647-51733666 None:intergenic 30.0%
TCACTATCTCAAATATTGCA+AGG - chr5.4:51736006-51736025 MS.gene34809:CDS 30.0%
TCTATTACTCTCTACAAATC+CGG + chr5.4:51734917-51734936 None:intergenic 30.0%
TTCGTGCCAATGAATTTATA+TGG - chr5.4:51734610-51734629 MS.gene34809:intron 30.0%
! AACAAAACTTGGTGGTTAAA+AGG + chr5.4:51734787-51734806 None:intergenic 30.0%
! ACTTCTTTTGCAAAACATGA+AGG + chr5.4:51735215-51735234 None:intergenic 30.0%
! CACTATTGAATTGACTTACT+CGG - chr5.4:51734059-51734078 MS.gene34809:CDS 30.0%
! TCATGTTTTGCAAAAGAAGT+AGG - chr5.4:51735215-51735234 MS.gene34809:CDS 30.0%
! TGTCCTTATTTAGCAGTTAA+AGG - chr5.4:51735181-51735200 MS.gene34809:CDS 30.0%
! TGTTAATTTTCGTAGGGAAT+GGG - chr5.4:51733703-51733722 MS.gene34809:CDS 30.0%
!! GATATATCGGATAATGGATA+TGG + chr5.4:51735455-51735474 None:intergenic 30.0%
!!! AACTGCTTTTTGAAAGACTA+TGG - chr5.4:51733736-51733755 MS.gene34809:CDS 30.0%
!!! ATTTGTACGTTAGTTTTGTG+CGG - chr5.4:51735029-51735048 MS.gene34809:CDS 30.0%
AAATCTGTTGTTGATCGTCA+AGG + chr5.4:51733941-51733960 None:intergenic 35.0%
AACGCAGCATAAACAAAACT+TGG + chr5.4:51734798-51734817 None:intergenic 35.0%
AAGGAGCAGATCACAATATT+AGG + chr5.4:51733446-51733465 None:intergenic 35.0%
ACCTCAATCTCATTGTTCAT+TGG + chr5.4:51733796-51733815 None:intergenic 35.0%
ACTCATGACCATAAGAAACA+AGG - chr5.4:51735415-51735434 MS.gene34809:CDS 35.0%
ACTCCTATGTGTACAATTGA+AGG - chr5.4:51734328-51734347 MS.gene34809:intron 35.0%
AGCATGCATGAAAATGTTGT+AGG - chr5.4:51733506-51733525 MS.gene34809:CDS 35.0%
AGGTTTCACATAGTATCCAT+GGG + chr5.4:51735948-51735967 None:intergenic 35.0%
AGTTCAGAAAAAGAATGGCA+AGG - chr5.4:51735298-51735317 MS.gene34809:intron 35.0%
ATAACATTGTAGATGGTGCA+TGG - chr5.4:51735360-51735379 MS.gene34809:intron 35.0%
ATCGTCAAGGTCATAAGATT+TGG + chr5.4:51733928-51733947 None:intergenic 35.0%
ATGCATGAAAATGTTGTAGG+TGG - chr5.4:51733509-51733528 MS.gene34809:CDS 35.0%
ATGGTCATGAGTAGTAGATT+AGG + chr5.4:51735407-51735426 None:intergenic 35.0%
CAGACATAGTGTCAAATTCA+AGG + chr5.4:51733595-51733614 None:intergenic 35.0%
CATATTATTTGCAACAGCGA+AGG + chr5.4:51735786-51735805 None:intergenic 35.0%
CATCAAACACATTTATTGGC+AGG + chr5.4:51733673-51733692 None:intergenic 35.0%
GCTTCTATATTCTGTTTCCA+AGG - chr5.4:51734523-51734542 MS.gene34809:intron 35.0%
GTGTACAATTGAAGGTGATT+GGG - chr5.4:51734336-51734355 MS.gene34809:intron 35.0%
TAACATTGTAGATGGTGCAT+GGG - chr5.4:51735361-51735380 MS.gene34809:intron 35.0%
TAGGTTTCACATAGTATCCA+TGG + chr5.4:51735949-51735968 None:intergenic 35.0%
TCAAAATCTTGACAGATGTG+CGG + chr5.4:51735535-51735554 None:intergenic 35.0%
TCACCTTCAATTGTACACAT+AGG + chr5.4:51734334-51734353 None:intergenic 35.0%
TCCAATGAACAATGAGATTG+AGG - chr5.4:51733792-51733811 MS.gene34809:CDS 35.0%
TCCTCATCTATTAGAATGGT+CGG + chr5.4:51733643-51733662 None:intergenic 35.0%
TCGCCTTTAACTGCTAAATA+AGG + chr5.4:51735187-51735206 None:intergenic 35.0%
TGCATGAAAATGTTGTAGGT+GGG - chr5.4:51733510-51733529 MS.gene34809:CDS 35.0%
TGGATACTATGTGAAACCTA+TGG - chr5.4:51735949-51735968 MS.gene34809:CDS 35.0%
TGTACAATTGAAGGTGATTG+GGG - chr5.4:51734337-51734356 MS.gene34809:intron 35.0%
TGTGTACAATTGAAGGTGAT+TGG - chr5.4:51734335-51734354 MS.gene34809:intron 35.0%
TTATTTAGCAGTTAAAGGCG+AGG - chr5.4:51735186-51735205 MS.gene34809:CDS 35.0%
! AGCTTTATATGAGGAAAGGT+TGG - chr5.4:51733839-51733858 MS.gene34809:intron 35.0%
! ATATGGTTGAAGAGTGTAAG+TGG - chr5.4:51734876-51734895 MS.gene34809:intron 35.0%
! ATGGGTCTATCTGAAATATG+CGG - chr5.4:51735379-51735398 MS.gene34809:intron 35.0%
! ATTTGAGATAGTGATTGACC+TGG + chr5.4:51736000-51736019 None:intergenic 35.0%
! CATGTCTGAAATAGAAACCA+TGG - chr5.4:51735065-51735084 MS.gene34809:CDS 35.0%
! GACAAGCTTTATATGAGGAA+AGG - chr5.4:51733835-51733854 MS.gene34809:intron 35.0%
! GATCAACAACAGATTTTTCG+AGG - chr5.4:51733945-51733964 MS.gene34809:CDS 35.0%
! GTGTTAATTTTCGTAGGGAA+TGG - chr5.4:51733702-51733721 MS.gene34809:CDS 35.0%
!! TATATGAGGAAAGGTTGGTA+TGG - chr5.4:51733844-51733863 MS.gene34809:intron 35.0%
!! TGCTTTTTGAAAGACTATGG+TGG - chr5.4:51733739-51733758 MS.gene34809:CDS 35.0%
ACAGTGAGGTCCGTATTTAT+CGG + chr5.4:51734250-51734269 None:intergenic 40.0%
ACTTACTCGGATGTTAACTC+AGG - chr5.4:51734072-51734091 MS.gene34809:CDS 40.0%
AGGATGTTTGGTATTCACTG+TGG - chr5.4:51734092-51734111 MS.gene34809:CDS 40.0%
ATGACCATAAGAAACAAGGC+TGG - chr5.4:51735419-51735438 MS.gene34809:CDS 40.0%
ATGCCTTATGCTATGATTGG+TGG - chr5.4:51735803-51735822 MS.gene34809:intron 40.0%
ATTAGACATTGCCGTGGTTT+GGG - chr5.4:51734203-51734222 MS.gene34809:CDS 40.0%
ATTATTGGAGTAGTGTGAGC+AGG + chr5.4:51733982-51734001 None:intergenic 40.0%
CAACGTAATCAATGACAGTG+AGG + chr5.4:51734264-51734283 None:intergenic 40.0%
CATAAGAAACAAGGCTGGAT+TGG - chr5.4:51735424-51735443 MS.gene34809:CDS 40.0%
CATGAAAATGTTGTAGGTGG+GGG - chr5.4:51733512-51733531 MS.gene34809:CDS 40.0%
CCTGATGAAGTAATGAACCT+CGG + chr5.4:51735488-51735507 None:intergenic 40.0%
CGAGGTTCATTACTTCATCA+GGG - chr5.4:51735486-51735505 MS.gene34809:CDS 40.0%
CGGTCCAGTTTGGATATTAT+TGG + chr5.4:51733997-51734016 None:intergenic 40.0%
CGTGTTACCTCCGATAAATA+CGG - chr5.4:51734237-51734256 MS.gene34809:CDS 40.0%
GACAAAGATAACACAGTCCT+TGG - chr5.4:51735896-51735915 MS.gene34809:CDS 40.0%
GACTTCTACAACATTGAGCT+TGG - chr5.4:51733874-51733893 MS.gene34809:intron 40.0%
GAGCAGATCACAATATTAGG+AGG + chr5.4:51733443-51733462 None:intergenic 40.0%
GAGGTTCATTACTTCATCAG+GGG - chr5.4:51735487-51735506 MS.gene34809:CDS 40.0%
GCAAGGGATATATCGGATAA+TGG + chr5.4:51735461-51735480 None:intergenic 40.0%
GCAGCATAAACAAAACTTGG+TGG + chr5.4:51734795-51734814 None:intergenic 40.0%
GCATGAAAATGTTGTAGGTG+GGG - chr5.4:51733511-51733530 MS.gene34809:CDS 40.0%
GGACTGTGTTATCTTTGTCA+TGG + chr5.4:51735895-51735914 None:intergenic 40.0%
GGATGTTAACTCAGGATGTT+TGG - chr5.4:51734080-51734099 MS.gene34809:CDS 40.0%
GGGTACAAAATGCATAACCT+TGG + chr5.4:51734543-51734562 None:intergenic 40.0%
GTACAATTGAAGGTGATTGG+GGG - chr5.4:51734338-51734357 MS.gene34809:intron 40.0%
GTGGATAAAATGATGCAGAC+CGG - chr5.4:51734895-51734914 MS.gene34809:intron 40.0%
TATGTGAAACCTATGGTCAG+CGG - chr5.4:51735956-51735975 MS.gene34809:CDS 40.0%
TCACCACCAATCATAGCATA+AGG + chr5.4:51735809-51735828 None:intergenic 40.0%
TCAGACTGCAATATGAACCT+TGG + chr5.4:51734502-51734521 None:intergenic 40.0%
TCATCATTGCCATCTCACTT+GGG + chr5.4:51733562-51733581 None:intergenic 40.0%
TCCGACCATTCTAATAGATG+AGG - chr5.4:51733639-51733658 MS.gene34809:CDS 40.0%
TGACAGATAAAGTTCAGCCA+TGG + chr5.4:51735085-51735104 None:intergenic 40.0%
TGATTGGGGGACAATATGTA+AGG - chr5.4:51734351-51734370 MS.gene34809:intron 40.0%
TGCGGAAAAAATGCACTAAC+TGG + chr5.4:51735517-51735536 None:intergenic 40.0%
TGTCACGCTGAATGAACTTT+AGG + chr5.4:51734306-51734325 None:intergenic 40.0%
TTGATTACGTTGGATTTGCC+TGG - chr5.4:51734272-51734291 MS.gene34809:CDS 40.0%
! AATTTTCGTAGGGAATGGGT+CGG - chr5.4:51733707-51733726 MS.gene34809:CDS 40.0%
! ATGCGCGTGTTAATTTTCGT+AGG - chr5.4:51733696-51733715 MS.gene34809:CDS 40.0%
! CTCACTGTCATTGATTACGT+TGG - chr5.4:51734262-51734281 MS.gene34809:CDS 40.0%
! TGCGCGTGTTAATTTTCGTA+GGG - chr5.4:51733697-51733716 MS.gene34809:CDS 40.0%
! TGGGTCTATCTGAAATATGC+GGG - chr5.4:51735380-51735399 MS.gene34809:intron 40.0%
!! ATGCTATGATTGGTGGTGAT+TGG - chr5.4:51735810-51735829 MS.gene34809:intron 40.0%
!! CAATCCAGCCTTGTTTCTTA+TGG + chr5.4:51735426-51735445 None:intergenic 40.0%
!! TGATTAGAGGCATTGATCCA+AGG - chr5.4:51734482-51734501 MS.gene34809:intron 40.0%
AAAATCACGACGGTCCAGTT+TGG + chr5.4:51734007-51734026 None:intergenic 45.0%
AACGACCTTCGACAAACCTA+CGG + chr5.4:51734378-51734397 None:intergenic 45.0%
AACGTATACCCCAAGTGAGA+TGG - chr5.4:51733550-51733569 MS.gene34809:CDS 45.0%
AATTCCCCCCAAAATCACGA+CGG + chr5.4:51734017-51734036 None:intergenic 45.0%
AGTATGCTGGAACAGATGTC+GGG - chr5.4:51736034-51736053 MS.gene34809:CDS 45.0%
ATCCATGGGTGCAGTGTATT+GGG + chr5.4:51735934-51735953 None:intergenic 45.0%
ATCTCACTTGGGGTATACGT+TGG + chr5.4:51733551-51733570 None:intergenic 45.0%
ATCTGCATTAGACATTGCCG+TGG - chr5.4:51734197-51734216 MS.gene34809:CDS 45.0%
CAACAGCGAACTTAACTGCA+TGG + chr5.4:51735871-51735890 None:intergenic 45.0%
CAAGTGAGATGGCAATGATG+AGG - chr5.4:51733561-51733580 MS.gene34809:CDS 45.0%
CATCATTGCCATCTCACTTG+GGG + chr5.4:51733561-51733580 None:intergenic 45.0%
CATTAGACATTGCCGTGGTT+TGG - chr5.4:51734202-51734221 MS.gene34809:CDS 45.0%
CCAACAATCGTAAGTGTGGT+AGG + chr5.4:51735731-51735750 None:intergenic 45.0%
CCGAGGTTCATTACTTCATC+AGG - chr5.4:51735485-51735504 MS.gene34809:CDS 45.0%
CCTACCACACTTACGATTGT+TGG - chr5.4:51735728-51735747 MS.gene34809:CDS 45.0%
CTCATCATTGCCATCTCACT+TGG + chr5.4:51733563-51733582 None:intergenic 45.0%
CTTACGATTGTTGGTCCGAA+CGG - chr5.4:51735737-51735756 MS.gene34809:CDS 45.0%
GAACTTTAGGTCACATCTCC+AGG + chr5.4:51734293-51734312 None:intergenic 45.0%
GAGTATGCTGGAACAGATGT+CGG - chr5.4:51736033-51736052 MS.gene34809:CDS 45.0%
GTAAGTGTGGTAGGTTTCTG+TGG + chr5.4:51735722-51735741 None:intergenic 45.0%
GTTTCTGTGGCAAGGATTTC+TGG + chr5.4:51735709-51735728 None:intergenic 45.0%
TATCCATGGGTGCAGTGTAT+TGG + chr5.4:51735935-51735954 None:intergenic 45.0%
TGCAGTGTATTGGGGTATGT+CGG + chr5.4:51735925-51735944 None:intergenic 45.0%
TGCATGCTGCAAATCAGCTT+TGG + chr5.4:51733494-51733513 None:intergenic 45.0%
TGTTTAACCAGACTTTGCCG+TGG - chr5.4:51735672-51735691 MS.gene34809:CDS 45.0%
! AAACTGGACCGTCGTGATTT+TGG - chr5.4:51734006-51734025 MS.gene34809:CDS 45.0%
! AACTGGACCGTCGTGATTTT+GGG - chr5.4:51734007-51734026 MS.gene34809:CDS 45.0%
! GAGGCGACAAGCTTTATATG+AGG - chr5.4:51733830-51733849 MS.gene34809:intron 45.0%
! GGGTCTATCTGAAATATGCG+GGG - chr5.4:51735381-51735400 MS.gene34809:intron 45.0%
! TATATACCAAAGTGCCCGAG+AGG + chr5.4:51735571-51735590 None:intergenic 45.0%
!! ACAACATTGAGCTTGGTGCA+TGG - chr5.4:51733881-51733900 MS.gene34809:intron 45.0%
!! GAAAGGTTGGTATGGACTGA+AGG - chr5.4:51733852-51733871 MS.gene34809:intron 45.0%
!! TCGTGATTTTGGGGGGAATT+TGG - chr5.4:51734017-51734036 MS.gene34809:CDS 45.0%
!!! TGTACGTTAGTTTTGTGCGG+TGG - chr5.4:51735032-51735051 MS.gene34809:CDS 45.0%
AACCAGACTTTGCCGTGGTA+TGG - chr5.4:51735677-51735696 MS.gene34809:CDS 50.0%
AATGAACCTCGGCAACGCAA+GGG + chr5.4:51735477-51735496 None:intergenic 50.0%
ACCTCTGCGATGTGCAAATC+AGG + chr5.4:51735838-51735857 None:intergenic 50.0%
ACGACCTTCGACAAACCTAC+GGG + chr5.4:51734377-51734396 None:intergenic 50.0%
ACTTCGTCTGATGTCCTCTC+GGG - chr5.4:51735554-51735573 MS.gene34809:CDS 50.0%
AGGTCGTTCGATAGACCTTG+CGG - chr5.4:51734390-51734409 MS.gene34809:intron 50.0%
AGGTCTACTTCAGACAAGGC+TGG - chr5.4:51735318-51735337 MS.gene34809:intron 50.0%
ATATATCCCTTGCGTTGCCG+AGG - chr5.4:51735468-51735487 MS.gene34809:CDS 50.0%
ATCTGCTCCTTGCTTGAGTG+TGG - chr5.4:51733455-51733474 MS.gene34809:CDS 50.0%
CAGTGGTCGATATGTGTACC+AGG - chr5.4:51735979-51735998 MS.gene34809:CDS 50.0%
CATCTCCATGTACAGCCGTT+CGG + chr5.4:51735755-51735774 None:intergenic 50.0%
CGCTTACAGAACCCAAACCA+CGG + chr5.4:51734217-51734236 None:intergenic 50.0%
CGGACCAACAATCGTAAGTG+TGG + chr5.4:51735735-51735754 None:intergenic 50.0%
CGGCAACGCAAGGGATATAT+CGG + chr5.4:51735468-51735487 None:intergenic 50.0%
CTGCATTTGTAGACGGCACA+GGG + chr5.4:51734459-51734478 None:intergenic 50.0%
GACTTCGTCTGATGTCCTCT+CGG - chr5.4:51735553-51735572 MS.gene34809:CDS 50.0%
GATAAGTCCTCAACCGAGAC+AGG + chr5.4:51734683-51734702 None:intergenic 50.0%
GATTTGCACATCGCAGAGGT+TGG - chr5.4:51735838-51735857 MS.gene34809:intron 50.0%
GGACAATATGTAAGGCCCGT+AGG - chr5.4:51734359-51734378 MS.gene34809:intron 50.0%
GGCAAGGTCTACTTCAGACA+AGG - chr5.4:51735314-51735333 MS.gene34809:intron 50.0%
GTGAGGTCCGTATTTATCGG+AGG + chr5.4:51734247-51734266 None:intergenic 50.0%
TAATGAACCTCGGCAACGCA+AGG + chr5.4:51735478-51735497 None:intergenic 50.0%
TCCATGGGTGCAGTGTATTG+GGG + chr5.4:51735933-51735952 None:intergenic 50.0%
TCTGCATTTGTAGACGGCAC+AGG + chr5.4:51734460-51734479 None:intergenic 50.0%
TGTGGTAGGTTTCTGTGGCA+AGG + chr5.4:51735717-51735736 None:intergenic 50.0%
TTCGATAGACCTTGCGGTCA+CGG - chr5.4:51734396-51734415 MS.gene34809:intron 50.0%
TTCTGGCAGAAGCCATACCA+CGG + chr5.4:51735692-51735711 None:intergenic 50.0%
TTGGGGTATGTCGGAAACCA+AGG + chr5.4:51735916-51735935 None:intergenic 50.0%
! ACCTGATTTGCACATCGCAG+AGG - chr5.4:51735834-51735853 MS.gene34809:intron 50.0%
! ACTGGACCGTCGTGATTTTG+GGG - chr5.4:51734008-51734027 MS.gene34809:CDS 50.0%
! TTGCAAGGCGAAGAGTATGC+TGG - chr5.4:51736021-51736040 MS.gene34809:CDS 50.0%
!! ACTTCAGACAAGGCTGGTCT+AGG - chr5.4:51735324-51735343 MS.gene34809:intron 50.0%
!! CTTCAGACAAGGCTGGTCTA+GGG - chr5.4:51735325-51735344 MS.gene34809:intron 50.0%
AAACCTATGGTCAGCGGCAG+TGG - chr5.4:51735962-51735981 MS.gene34809:CDS 55.0%
AAGGCCCGTAGGTTTGTCGA+AGG - chr5.4:51734370-51734389 MS.gene34809:intron 55.0%
ACCCCAATACACTGCACCCA+TGG - chr5.4:51735929-51735948 MS.gene34809:CDS 55.0%
AGCCATACCACGGCAAAGTC+TGG + chr5.4:51735682-51735701 None:intergenic 55.0%
CCAACGACCACACTCAAGCA+AGG + chr5.4:51733465-51733484 None:intergenic 55.0%
CCTTGCTTGAGTGTGGTCGT+TGG - chr5.4:51733462-51733481 MS.gene34809:CDS 55.0%
GAGGTTCGACTGTATCGCAG+AGG - chr5.4:51733811-51733830 MS.gene34809:intron 55.0%
TGATGTCCTCTCGGGCACTT+TGG - chr5.4:51735562-51735581 MS.gene34809:CDS 55.0%
TTGGTCCGAACGGCTGTACA+TGG - chr5.4:51735747-51735766 MS.gene34809:CDS 55.0%
! ACATCGCAGAGGTTGGTTGC+AGG - chr5.4:51735845-51735864 MS.gene34809:intron 55.0%
! CTGGACCGTCGTGATTTTGG+GGG - chr5.4:51734009-51734028 MS.gene34809:CDS 55.0%
! TGGACCGTCGTGATTTTGGG+GGG - chr5.4:51734010-51734029 MS.gene34809:CDS 55.0%
!! ACAAGGCTGGTCTAGGGTGA+AGG - chr5.4:51735331-51735350 MS.gene34809:intron 55.0%
ACGACCTCGATCCTGTGCGA+AGG - chr5.4:51734655-51734674 MS.gene34809:intron 60.0%
CGACCTCGATCCTGTGCGAA+GGG - chr5.4:51734656-51734675 MS.gene34809:intron 60.0%
CTGTGCGAAGGGACCTGTCT+CGG - chr5.4:51734667-51734686 MS.gene34809:intron 60.0%
GAAGGGACCTGTCTCGGTTG+AGG - chr5.4:51734673-51734692 MS.gene34809:intron 60.0%
GATAGACCTTGCGGTCACGG+AGG - chr5.4:51734399-51734418 MS.gene34809:intron 60.0%
TCTTCTCCTCCGTGACCGCA+AGG + chr5.4:51734408-51734427 None:intergenic 60.0%
CGACCACTGCCGCTGACCAT+AGG + chr5.4:51735968-51735987 None:intergenic 65.0%
CGAGACAGGTCCCTTCGCAC+AGG + chr5.4:51734669-51734688 None:intergenic 65.0%
GGTCCCTTCGCACAGGATCG+AGG + chr5.4:51734662-51734681 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 51733437 51736060 51733437 ID=MS.gene34809
chr5.4 mRNA 51733437 51736060 51733437 ID=MS.gene34809.t1;Parent=MS.gene34809
chr5.4 exon 51735884 51736060 51735884 ID=MS.gene34809.t1.exon1;Parent=MS.gene34809.t1
chr5.4 CDS 51735884 51736060 51735884 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
chr5.4 exon 51735396 51735779 51735396 ID=MS.gene34809.t1.exon2;Parent=MS.gene34809.t1
chr5.4 CDS 51735396 51735779 51735396 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
chr5.4 exon 51734953 51735289 51734953 ID=MS.gene34809.t1.exon3;Parent=MS.gene34809.t1
chr5.4 CDS 51734953 51735289 51734953 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
chr5.4 exon 51734772 51734851 51734772 ID=MS.gene34809.t1.exon4;Parent=MS.gene34809.t1
chr5.4 CDS 51734772 51734851 51734772 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
chr5.4 exon 51733914 51734300 51733914 ID=MS.gene34809.t1.exon5;Parent=MS.gene34809.t1
chr5.4 CDS 51733914 51734300 51733914 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
chr5.4 exon 51733437 51733814 51733437 ID=MS.gene34809.t1.exon6;Parent=MS.gene34809.t1
chr5.4 CDS 51733437 51733814 51733437 ID=cds.MS.gene34809.t1;Parent=MS.gene34809.t1
Gene Sequence

>MS.gene34809

ATGCCTCCTAATATTGTGATCTGCTCCTTGCTTGAGTGTGGTCGTTGGTTTTATCCAAAGCTGATTTGCAGCATGCATGAAAATGTTGTAGGTGGGGGTAACGACTTTCATCCAACGTATACCCCAAGTGAGATGGCAATGATGAGGACATACTTCCTTGAATTTGACACTATGTCTGTAAGTGTTGTTAAATAATTTTGTCTCCGACCATTCTAATAGATGAGGACATACTTCCTGCCAATAAATGTGTTTGATGCTAATGCGCGTGTTAATTTTCGTAGGGAATGGGTCGGATGCCTAACTGCTTTTTGAAAGACTATGGTGGTTATATTGAAGACTACGTTATGTTGCGAGATCCAATGAACAATGAGATTGAGGTTCGACTGTATCGCAGAGGCGACAAGCTTTATATGAGGAAAGGTTGGTATGGACTGAAGGACTTCTACAACATTGAGCTTGGTGCATGGATAGACTTGACATATGAAAGACCAAATCTTATGACCTTGACGATCAACAACAGATTTTTCGAGGAAATTTTGTATCCTGCTCACACTACTCCAATAATATCCAAACTGGACCGTCGTGATTTTGGGGGGAATTTGGATGATTTTTTTGAGACATTCACTATTGAATTGACTTACTCGGATGTTAACTCAGGATGTTTGGTATTCACTGTGGATTGCTTTATATTTCCGTTGTGTTATTGTTTATTTCTTAAATGATATTTCTGTTTGTGTTTAGTAACGGTGTTTATTATTTCATCTGCATTAGACATTGCCGTGGTTTGGGTTCTGTAAGCGCGTGTTACCTCCGATAAATACGGACCTCACTGTCATTGATTACGTTGGATTTGCCTGGAGATGTGACCTAAAGTTCATTCAGCGTGACAAGACTCCTATGTGTACAATTGAAGGTGATTGGGGGACAATATGTAAGGCCCGTAGGTTTGTCGAAGGTCGTTCGATAGACCTTGCGGTCACGGAGGAGAAGAATAATTATGTGCTTTACTTGAAATTTATCCCTGTGCCGTCTACAAATGCAGATTTGATTAGAGGCATTGATCCAAGGTTCATATTGCAGTCTGATGCTTCTATATTCTGTTTCCAAGGTTATGCATTTTGTACCCTGAACTGAAGTATATGTTGTTTATTCTGTCCGGCAATTTGATTGTTATTCGTGCCAATGAATTTATATGGTTTTTTATTACAGACTCTGCTAACGACCTCGATCCTGTGCGAAGGGACCTGTCTCGGTTGAGGACTTATCGTCTCGAGCTAGATAGCGACATTGTGAGATCTCTGTCTTCTTATTAGTGCAATTGTACTAAAAATTTGTGTAATTTATGTGCCTTTTAACCACCAAGTTTTGTTTATGCTGCGTTGTTCTTAAATTTTAAAATTTTCACGACAACAATAAGGATAGTACATTCTAATTTGAATATATGGTTGAAGAGTGTAAGTGGATAAAATGATGCAGACCGGATTTGTAGAGAGTAATAGAAGTTTTTGCATATACGAATCTGAGATTCAGACATAATTGATAATAGTTATCATAAACTCTGTCTAGGATTGCTGATCTCAGACGCCGAAAAAATTTGTACGTTAGTTTTGTGCGGTGGTTATTGTATTCATGTCTGAAATAGAAACCATGGCTGAACTTTATCTGTCAGATATACTTTCTTATGTCCGGCATAAATTTATGTTAACATTTTCTATTATGGTTTCCTATCTAATATCATAAGGTGTGTCCTTATTTAGCAGTTAAAGGCGAGGTTACCTTCATGTTTTGCAAAAGAAGTAGGCGTGCATATTGATGATCATGTTATGCTTCGTGATCCAAACAACAATATCATTGTTGTTGAAGTTCAGAAAAAGAATGGCAAGGTCTACTTCAGACAAGGCTGGTCTAGGGTGAAGGATATTTATAACATTGTAGATGGTGCATGGGTCTATCTGAAATATGCGGGGCCTAATCTACTACTCATGACCATAAGAAACAAGGCTGGATTGGAGATACCATATCCATTATCCGATATATCCCTTGCGTTGCCGAGGTTCATTACTTCATCAGGGGAGAGCCAGTTAGTGCATTTTTTCCGCACATCTGTCAAGATTTTGACTTCGTCTGATGTCCTCTCGGGCACTTTGGTATATAATTTGCACTAATTGGTTAATATAATTAGATATTTGGTTATTTCGTTCATTCGATTATAAGGTTATCTTACTGTTTGTTGGTTGTTTAACCAGACTTTGCCGTGGTATGGCTTCTGCCAGAAATCCTTGCCACAGAAACCTACCACACTTACGATTGTTGGTCCGAACGGCTGTACATGGAGATGTGATCTGACCTTCGCTGTTGCAAATAATATGCCTTATGCTATGATTGGTGGTGATTGGAACCTGATTTGCACATCGCAGAGGTTGGTTGCAGGCCATGCAGTTAAGTTCGCTGTTGTCCATGACAAAGATAACACAGTCCTTGGTTTCCGACATACCCCAATACACTGCACCCATGGATACTATGTGAAACCTATGGTCAGCGGCAGTGGTCGATATGTGTACCAGGTCAATCACTATCTCAAATATTGCAAGGCGAAGAGTATGCTGGAACAGATGTCGGGATGA
Protein sequence

>MS.gene34809.t1

MPPNIVICSLLECGRWFYPKLICSMHENVVGGGNDFHPTYTPSEMAMMRTYFLEFDTMSGMGRMPNCFLKDYGGYIEDYVMLRDPMNNEIEVRLYRRGDKLYMRKGWYGLKDFYNIELGAWIDLTYERPNLMTLTINNRFFEEILYPAHTTPIISKLDRRDFGGNLDDFFETFTIELTYSDVNSGCLTLPWFGFCKRVLPPINTDLTVIDYVGFAWRCDLKFIQRDKTPMCTIEGDWGTICKARRFVEGRSIDLAVTEEKNNYVLYLKFIPVPSTNADLIRGIDPRFILQSDASIFCFQDSANDLDPVRRDLSRLRTYRLELDSDILKARLPSCFAKEVGVHIDDHVMLRDPNNNIIVVEVQKKNGKVYFRQGWSRVKDIYNIVDGAWVYLKYAGPNLLLMTIRNKAGLEIPYPLSDISLALPRFITSSGESQLVHFFRTSVKILTSSDVLSGTLTLPWYGFCQKSLPQKPTTLTIVGPNGCTWRCDLTFAVANNMPYAMIGGDWNLICTSQRLVAGHAVKFAVVHDKDNTVLGFRHTPIHCTHGYYVKPMVSGSGRYVYQVNHYLKYCKAKSMLEQMSG