Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35040.t1 | XP_013457215.2 | 94 | 382 | 21 | 1 | 7 | 386 | 1 | 382 | 7.90E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35040.t1 | A0A396IAU5 | 94.0 | 382 | 21 | 1 | 7 | 386 | 1 | 382 | 5.7e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene35040.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35040.t1 | MTR_4g094292 | 90.451 | 377 | 34 | 1 | 12 | 386 | 1 | 377 | 0.0 | 632 |
| MS.gene35040.t1 | MTR_4g094298 | 74.419 | 86 | 18 | 3 | 305 | 386 | 17 | 102 | 5.37e-36 | 127 |
| MS.gene35040.t1 | MTR_4g094358 | 75.862 | 58 | 12 | 1 | 305 | 360 | 17 | 74 | 6.13e-22 | 91.7 |
| MS.gene35040.t1 | MTR_6g033835 | 80.556 | 36 | 7 | 0 | 114 | 149 | 72 | 107 | 2.29e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 114 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCAATTCTCCGATTTA+TGG | 0.116513 | 4.4:-20627501 | MS.gene35040:CDS |
| GCTTTCTTCAATTGAGAATT+TGG | 0.178850 | 4.4:-20627379 | MS.gene35040:CDS |
| TCAGGAACAATGCGGCTATC+TGG | 0.245914 | 4.4:+20623713 | None:intergenic |
| TACCTCAGATTTACTCTTCA+TGG | 0.246210 | 4.4:+20624013 | None:intergenic |
| CTTGATTGTGTAGGCACATA+TGG | 0.289435 | 4.4:-20623888 | MS.gene35040:intron |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.4:+20623695 | None:intergenic |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.4:+20623809 | None:intergenic |
| CCGTACTCCGGCAACAGTTC+AGG | 0.302302 | 4.4:-20627447 | MS.gene35040:CDS |
| TATTGTGATGGATGATATTC+AGG | 0.326560 | 4.4:-20627295 | MS.gene35040:CDS |
| TCATCATCATCTTCTTCTTC+CGG | 0.365609 | 4.4:-20627237 | MS.gene35040:CDS |
| GCATGAGTGCGATGAGGTTC+AGG | 0.378070 | 4.4:+20623740 | None:intergenic |
| GGAACTCTGTCTGAACCATT+TGG | 0.381458 | 4.4:+20623545 | None:intergenic |
| CTGTTCTTTCCTCCTGACAT+TGG | 0.382703 | 4.4:+20627267 | None:intergenic |
| CTGGACTCATCGTTGTTGAT+TGG | 0.383003 | 4.4:+20627628 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.387048 | 4.4:+20623827 | None:intergenic |
| GCGGGAACAAACCTGGCATT+TGG | 0.389416 | 4.4:+20627113 | None:intergenic |
| GCCGAGAACTTCGACGTTAC+CGG | 0.389780 | 4.4:-20627588 | MS.gene35040:CDS |
| TGAAGAAGGTTTCCAAGTTA+AGG | 0.391044 | 4.4:-20627716 | MS.gene35040:CDS |
| AGGTTCAGGCGAAGCTGGTT+GGG | 0.411136 | 4.4:+20623640 | None:intergenic |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.4:-20623689 | MS.gene35040:CDS |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.4:-20623803 | MS.gene35040:CDS |
| GCCTGAGTGTGATGAGGTTC+AGG | 0.415449 | 4.4:+20623626 | None:intergenic |
| TGCAGAGCATGGGAGGAATC+TGG | 0.420303 | 4.4:-20627153 | MS.gene35040:CDS |
| CTCGTTCGAAGTCCTTAACT+TGG | 0.422674 | 4.4:+20627704 | None:intergenic |
| AGGTTCAGGCGAAGCTGGTT+GGG | 0.424442 | 4.4:+20623754 | None:intergenic |
| GAACTCTGTCTGAACCATTT+GGG | 0.424835 | 4.4:+20623546 | None:intergenic |
| GTCGCTGATGGTGTTGGAAT+TGG | 0.433664 | 4.4:+20623604 | None:intergenic |
| GCCGGTAACGTCGAAGTTCT+CGG | 0.438838 | 4.4:+20627587 | None:intergenic |
| ATTGAGGTTGTCCTCCCAAA+TGG | 0.439687 | 4.4:-20623560 | MS.gene35040:CDS |
| TCATCTTCTTCTTCCGGTAG+AGG | 0.445192 | 4.4:-20627231 | MS.gene35040:CDS |
| CAGGAACAATGCGGCTATCT+GGG | 0.445665 | 4.4:+20623714 | None:intergenic |
| GCGGCGTAGGGTTGAAAACC+TGG | 0.445857 | 4.4:+20627609 | None:intergenic |
| TACTTACTGGAGCCATAAAT+CGG | 0.446103 | 4.4:+20627489 | None:intergenic |
| CTTAAACAACACACTCTTCG+AGG | 0.446531 | 4.4:+20627185 | None:intergenic |
| CGATGAGGTTCAGGCGAAGC+TGG | 0.453590 | 4.4:+20623749 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.459450 | 4.4:+20623828 | None:intergenic |
| AGAAGGAGGTTTGCAGAGCA+TGG | 0.460342 | 4.4:-20627164 | MS.gene35040:CDS |
| CCTGAACTGTTGCCGGAGTA+CGG | 0.462019 | 4.4:+20627447 | None:intergenic |
| CTCTTCATGGAGAGACGACT+TGG | 0.464197 | 4.4:+20624026 | None:intergenic |
| GAGTGTGTTGTTTAAGAAGG+AGG | 0.464562 | 4.4:-20627178 | MS.gene35040:CDS |
| CATCAGCGACTGGTCACCTC+TGG | 0.465644 | 4.4:-20623591 | MS.gene35040:CDS |
| AGCGAGCTGCGACGGCGAGC+CGG | 0.471289 | 4.4:+20627569 | None:intergenic |
| AGAGCAGGACTGTGCTTGTA+TGG | 0.480071 | 4.4:-20623851 | MS.gene35040:CDS |
| TCACTGGATTTAGCAGAAAT+CGG | 0.480187 | 4.4:+20627525 | None:intergenic |
| TTGATTGTGTAGGCACATAT+GGG | 0.487743 | 4.4:-20623887 | MS.gene35040:intron |
| TCGAAGTTCTCGGCGGCGTA+GGG | 0.488149 | 4.4:+20627597 | None:intergenic |
| CGGAGAATTGAATGAGTCAC+TGG | 0.498104 | 4.4:+20627509 | None:intergenic |
| AACAATGCGGCTATCTGGGC+TGG | 0.504280 | 4.4:+20623718 | None:intergenic |
| GATGTATCAAACGCCGGTGA+AGG | 0.504339 | 4.4:-20627331 | MS.gene35040:CDS |
| GATGAAGCTCTTCTCTTCCG+TGG | 0.504434 | 4.4:+20624048 | None:intergenic |
| GAAGAGTGTGTTGTTTAAGA+AGG | 0.506801 | 4.4:-20627181 | MS.gene35040:CDS |
| CGTACTCCGGCAACAGTTCA+GGG | 0.510086 | 4.4:-20627446 | MS.gene35040:CDS |
| GTCGAAGTTCTCGGCGGCGT+AGG | 0.512563 | 4.4:+20627596 | None:intergenic |
| CTTGCAAGTCTTGTGACTAC+AGG | 0.513276 | 4.4:+20623665 | None:intergenic |
| GAAGGAGGTTTGCAGAGCAT+GGG | 0.513507 | 4.4:-20627163 | MS.gene35040:CDS |
| TGATGAGGTTCAGGCGAAGC+TGG | 0.516999 | 4.4:+20623635 | None:intergenic |
| TCATCCAACTCGATCATCAA+TGG | 0.518876 | 4.4:+20627672 | None:intergenic |
| GACTGGTCACCTCTGGATGA+TGG | 0.522863 | 4.4:-20623584 | MS.gene35040:CDS |
| GGAAGATGAAGAGCCTCTAC+CGG | 0.530743 | 4.4:+20627218 | None:intergenic |
| GAGGTTCAGGCGAAGCTGGT+TGG | 0.532007 | 4.4:+20623639 | None:intergenic |
| GAGGTTCAGGCGAAGCTGGT+TGG | 0.532007 | 4.4:+20623753 | None:intergenic |
| ATTCAGGTGAGGCCAATGTC+AGG | 0.532076 | 4.4:-20627279 | MS.gene35040:CDS |
| ATTGCAAGTCTTGTGACTAC+AGG | 0.536990 | 4.4:+20623779 | None:intergenic |
| AAGTATTTAGCGAGCTGCGA+CGG | 0.537721 | 4.4:+20627561 | None:intergenic |
| ATGAAGCTCTTCTCTTCCGT+GGG | 0.538111 | 4.4:+20624049 | None:intergenic |
| GGCAGATTATCTCCGAGAGC+AGG | 0.538911 | 4.4:-20623866 | MS.gene35040:CDS |
| GTTCAGACAGAGTTCCCTCT+AGG | 0.542921 | 4.4:-20623538 | MS.gene35040:CDS |
| GGAGGTTTGCAGAGCATGGG+AGG | 0.543989 | 4.4:-20627160 | MS.gene35040:CDS |
| TTTATGGCTCCAGTAAGTAC+AGG | 0.546704 | 4.4:-20627485 | MS.gene35040:CDS |
| CCGCTATGACTCCAAATGCC+AGG | 0.551499 | 4.4:-20627124 | MS.gene35040:intron |
| TTCGCCATTGATGATCGAGT+TGG | 0.551669 | 4.4:-20627676 | MS.gene35040:CDS |
| TACAAGCACAGTCCTGCTCT+CGG | 0.557055 | 4.4:+20623854 | None:intergenic |
| AGGACTGTGCTTGTATGGCC+CGG | 0.559322 | 4.4:-20623846 | MS.gene35040:CDS |
| CAATCAACAACGATGAGTCC+AGG | 0.566783 | 4.4:-20627627 | MS.gene35040:CDS |
| GAACAACAGCAAGATGAAGA+AGG | 0.574444 | 4.4:-20627730 | MS.gene35040:CDS |
| CAGAGGTGACCAGTCGCTGA+TGG | 0.576161 | 4.4:+20623592 | None:intergenic |
| TGACCAGTCGCTGATGGTGT+TGG | 0.577141 | 4.4:+20623598 | None:intergenic |
| ACCTCTGGATGATGGCATTG+AGG | 0.577145 | 4.4:-20623576 | MS.gene35040:CDS |
| TACTCCGGCAACAGTTCAGG+GGG | 0.579941 | 4.4:-20627444 | MS.gene35040:CDS |
| AAATTCTCAATTGAAGAAAG+CGG | 0.583951 | 4.4:+20627381 | None:intergenic |
| ATGTATCAAACGCCGGTGAA+GGG | 0.585801 | 4.4:-20627330 | MS.gene35040:CDS |
| TTCAGACAGAGTTCCCTCTA+GGG | 0.586505 | 4.4:-20623537 | MS.gene35040:CDS |
| ACTCTTCGAGGACGAAGAAG+AGG | 0.590723 | 4.4:+20627197 | None:intergenic |
| GCCTGAACCTCATCACACTC+AGG | 0.612021 | 4.4:-20623627 | MS.gene35040:CDS |
| GAATTGGCCTGAGTGTGATG+AGG | 0.612093 | 4.4:+20623620 | None:intergenic |
| ACTTCCTCACCACCCTTCAC+CGG | 0.613181 | 4.4:+20627318 | None:intergenic |
| GCATCAACTTCCTCCCTAGA+GGG | 0.614358 | 4.4:+20623524 | None:intergenic |
| CTCTGTCTGAACCATTTGGG+AGG | 0.615742 | 4.4:+20623549 | None:intergenic |
| CTCCATGAAGAGTAAATCTG+AGG | 0.616657 | 4.4:-20624015 | MS.gene35040:intron |
| ATTCCAACACCATCAGCGAC+TGG | 0.617264 | 4.4:-20623601 | MS.gene35040:CDS |
| AACGCCGGTGAAGGGTGGTG+AGG | 0.621390 | 4.4:-20627322 | MS.gene35040:CDS |
| TGCATCAACTTCCTCCCTAG+AGG | 0.621656 | 4.4:+20623523 | None:intergenic |
| TATCAAACGCCGGTGAAGGG+TGG | 0.628960 | 4.4:-20627327 | MS.gene35040:CDS |
| TGGTGAGGAAGTTATTGTGA+TGG | 0.633081 | 4.4:-20627307 | MS.gene35040:CDS |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.4:+20623688 | None:intergenic |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.4:+20623802 | None:intergenic |
| CTTCAATTGAGAATTTGGAG+AGG | 0.640144 | 4.4:-20627374 | MS.gene35040:CDS |
| AGACAGAGTTCCCTCTAGGG+AGG | 0.648644 | 4.4:-20623534 | MS.gene35040:CDS |
| GTACTCCGGCAACAGTTCAG+GGG | 0.653779 | 4.4:-20627445 | MS.gene35040:CDS |
| ACCTCAATGCCATCATCCAG+AGG | 0.655138 | 4.4:+20623575 | None:intergenic |
| TCCGCGGATGTATCAAACGC+CGG | 0.656349 | 4.4:-20627337 | MS.gene35040:CDS |
| GGAAGCAGCTCTCGTCTCCG+CGG | 0.669277 | 4.4:-20627353 | MS.gene35040:CDS |
| AATAGTAGCTTCAGTTCTCG+CGG | 0.669849 | 4.4:-20627420 | MS.gene35040:CDS |
| CAGGTGAGGCCAATGTCAGG+AGG | 0.674041 | 4.4:-20627276 | MS.gene35040:CDS |
| GAACTGTTGCCGGAGTACGG+TGG | 0.688179 | 4.4:+20627450 | None:intergenic |
| CCTGGCATTTGGAGTCATAG+CGG | 0.709847 | 4.4:+20627124 | None:intergenic |
| ACCGGCGTTTGATACATCCG+CGG | 0.714416 | 4.4:+20627336 | None:intergenic |
| ATCGAGTTGGATGATAACAG+AGG | 0.715067 | 4.4:-20627663 | MS.gene35040:CDS |
| GGGCTGGCATGAGTGCGATG+AGG | 0.717894 | 4.4:+20623734 | None:intergenic |
| TGATGGATGATATTCAGGTG+AGG | 0.744981 | 4.4:-20627290 | MS.gene35040:CDS |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4.4:+20623705 | None:intergenic |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4.4:+20623819 | None:intergenic |
| GGTAACGTCGAAGTTCTCGG+CGG | 0.777146 | 4.4:+20627590 | None:intergenic |
| ACTCCGGCAACAGTTCAGGG+GGG | 0.786022 | 4.4:-20627443 | MS.gene35040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTTATTAAATTTGATAT+AGG | + | chr4.4:20625700-20625719 | None:intergenic | 10.0% |
| !!! | TTTATCTTTTGTTATAAAAA+TGG | - | chr4.4:20626485-20626504 | MS.gene35040:intron | 10.0% |
| !! | AAAAATAAGATAGTAATGTA+TGG | - | chr4.4:20625603-20625622 | MS.gene35040:intron | 15.0% |
| !! | AAAATAAGATAGTAATGTAT+GGG | - | chr4.4:20625604-20625623 | MS.gene35040:intron | 15.0% |
| !! | AAAGAAAAATTAAGAAGTAA+AGG | + | chr4.4:20625944-20625963 | None:intergenic | 15.0% |
| !! | GATGATTGTAATTAAAATTT+GGG | + | chr4.4:20625570-20625589 | None:intergenic | 15.0% |
| !! | TAAGAAAGAATATATTAAGA+TGG | - | chr4.4:20625152-20625171 | MS.gene35040:intron | 15.0% |
| !! | TACAACTCATTAAAATTATT+TGG | - | chr4.4:20626456-20626475 | MS.gene35040:intron | 15.0% |
| !! | TGATGATTGTAATTAAAATT+TGG | + | chr4.4:20625571-20625590 | None:intergenic | 15.0% |
| !! | TGTCTATTTAAATTAGAATT+AGG | + | chr4.4:20625803-20625822 | None:intergenic | 15.0% |
| !! | TTATATGTATTCTCTAATTA+AGG | - | chr4.4:20624267-20624286 | MS.gene35040:intron | 15.0% |
| !!! | AGAATTTTATTCATCTTAAT+TGG | - | chr4.4:20624201-20624220 | MS.gene35040:intron | 15.0% |
| !! | AAGATATTATTGTACTTCTA+TGG | - | chr4.4:20627053-20627072 | MS.gene35040:intron | 20.0% |
| !! | ATTAAACCATTTATCCAAAT+AGG | - | chr4.4:20626556-20626575 | MS.gene35040:intron | 20.0% |
| !! | CAATAATATCTTTCTTATAC+AGG | + | chr4.4:20627045-20627064 | None:intergenic | 20.0% |
| !! | CATTGAATTCATAATAGTTA+TGG | + | chr4.4:20624107-20624126 | None:intergenic | 20.0% |
| !!! | ATCGATTAAGATAATTTTTG+TGG | - | chr4.4:20626882-20626901 | MS.gene35040:intron | 20.0% |
| !!! | TTTAGATTTTAGCATTTGTT+TGG | - | chr4.4:20624626-20624645 | MS.gene35040:intron | 20.0% |
| ! | AAATCAGAATAACCTATACT+TGG | + | chr4.4:20625292-20625311 | None:intergenic | 25.0% |
| ! | AAATTACAGTTAGTGAGTTA+TGG | - | chr4.4:20626795-20626814 | MS.gene35040:intron | 25.0% |
| ! | AAATTACTTTCCCAAAAACA+AGG | - | chr4.4:20625352-20625371 | MS.gene35040:intron | 25.0% |
| ! | AAATTCTCAATTGAAGAAAG+CGG | + | chr4.4:20623817-20623836 | None:intergenic | 25.0% |
| ! | AAATTGCGTTTATAAAGCAT+TGG | - | chr4.4:20624712-20624731 | MS.gene35040:intron | 25.0% |
| ! | AAGACAAACTCACTATAAAT+TGG | - | chr4.4:20625028-20625047 | MS.gene35040:intron | 25.0% |
| ! | ACTTATAGCATAAGTTCTTA+TGG | + | chr4.4:20626531-20626550 | None:intergenic | 25.0% |
| ! | AGATTCTTAATCAAACTATC+TGG | + | chr4.4:20626171-20626190 | None:intergenic | 25.0% |
| ! | CACAAGTTACTTGTTTAATT+GGG | - | chr4.4:20625234-20625253 | MS.gene35040:intron | 25.0% |
| ! | GATAGTTTGATTAAGAATCT+TGG | - | chr4.4:20626171-20626190 | MS.gene35040:intron | 25.0% |
| ! | TAATGACACTAACTAATTGA+TGG | - | chr4.4:20626761-20626780 | MS.gene35040:intron | 25.0% |
| ! | TAATTAAGGTATGAGTTTGT+TGG | - | chr4.4:20624281-20624300 | MS.gene35040:intron | 25.0% |
| ! | TCACAAGTTACTTGTTTAAT+TGG | - | chr4.4:20625233-20625252 | MS.gene35040:intron | 25.0% |
| ! | TCTGTAGAATTGTATATTGA+GGG | - | chr4.4:20626262-20626281 | MS.gene35040:intron | 25.0% |
| ! | TGAATTCATAATAGTTATGG+CGG | + | chr4.4:20624104-20624123 | None:intergenic | 25.0% |
| ! | TTAACTATTAAGTGCATGTT+TGG | - | chr4.4:20624340-20624359 | MS.gene35040:intron | 25.0% |
| ! | TTAGGTGTTTATTATGCTAA+AGG | + | chr4.4:20627237-20627256 | None:intergenic | 25.0% |
| !! | AACGAAAATAGACTGTATTT+TGG | - | chr4.4:20625829-20625848 | MS.gene35040:intron | 25.0% |
| !! | AATTCAATGATTCCTGTTTT+TGG | - | chr4.4:20624118-20624137 | MS.gene35040:intron | 25.0% |
| !! | AATTGCGTTTATAAAGCATT+GGG | - | chr4.4:20624713-20624732 | MS.gene35040:intron | 25.0% |
| !! | ATTTCATGGAGCAATAATTT+TGG | - | chr4.4:20625453-20625472 | MS.gene35040:intron | 25.0% |
| !! | GGTTGTTTCATTATAAATCT+AGG | - | chr4.4:20625376-20625395 | MS.gene35040:intron | 25.0% |
| !! | TTAGCATTTGTTTGGAATTA+CGG | - | chr4.4:20624634-20624653 | MS.gene35040:intron | 25.0% |
| !!! | TTGTTTTTGGGAAAGTAATT+TGG | + | chr4.4:20625353-20625372 | None:intergenic | 25.0% |
| AAAACACAACTTGCAAACAA+GGG | - | chr4.4:20624437-20624456 | MS.gene35040:intron | 30.0% | |
| AAACAGCTTATGTAGTTATG+TGG | - | chr4.4:20626358-20626377 | MS.gene35040:intron | 30.0% | |
| ATCTTATCACAGAACATCTA+TGG | - | chr4.4:20627000-20627019 | MS.gene35040:intron | 30.0% | |
| CATAATAAACACCTAATCAG+CGG | - | chr4.4:20627241-20627260 | MS.gene35040:CDS | 30.0% | |
| CTCTGTAGAATTGTATATTG+AGG | - | chr4.4:20626261-20626280 | MS.gene35040:intron | 30.0% | |
| GAAATTCCTTATGCACTAAA+AGG | + | chr4.4:20626046-20626065 | None:intergenic | 30.0% | |
| GAATTCATAATAGTTATGGC+GGG | + | chr4.4:20624103-20624122 | None:intergenic | 30.0% | |
| GATCATATATCGCACTTTAT+AGG | + | chr4.4:20624807-20624826 | None:intergenic | 30.0% | |
| GCTTTCTTCAATTGAGAATT+TGG | - | chr4.4:20623816-20623835 | MS.gene35040:CDS | 30.0% | |
| GTATAGAACTATAGATGTCA+AGG | + | chr4.4:20625968-20625987 | None:intergenic | 30.0% | |
| GTGTTAGGCTTTCTATATAA+GGG | - | chr4.4:20626834-20626853 | MS.gene35040:intron | 30.0% | |
| GTTTATTATGCTAAAGGACA+AGG | + | chr4.4:20627231-20627250 | None:intergenic | 30.0% | |
| TAAAACACAACTTGCAAACA+AGG | - | chr4.4:20624436-20624455 | MS.gene35040:intron | 30.0% | |
| TAGTAAATTTGCCGAAATCA+CGG | + | chr4.4:20624399-20624418 | None:intergenic | 30.0% | |
| TATTGCTCCATGAAATTAAC+CGG | + | chr4.4:20625449-20625468 | None:intergenic | 30.0% | |
| TCATTCAATTCTCCGATTTA+TGG | - | chr4.4:20623694-20623713 | MS.gene35040:CDS | 30.0% | |
| TGTAGTTATGTGGAATTCTA+TGG | - | chr4.4:20626368-20626387 | MS.gene35040:intron | 30.0% | |
| TGTGTTAGGCTTTCTATATA+AGG | - | chr4.4:20626833-20626852 | MS.gene35040:intron | 30.0% | |
| TTAACCAGACTATGATACTA+GGG | - | chr4.4:20626133-20626152 | MS.gene35040:intron | 30.0% | |
| TTAATTTCTGCAATCTCTGT+TGG | - | chr4.4:20626000-20626019 | MS.gene35040:intron | 30.0% | |
| TTAGGTCCTATTTGGATAAA+TGG | + | chr4.4:20626565-20626584 | None:intergenic | 30.0% | |
| TTCTATATAAGGGAGTCATA+AGG | - | chr4.4:20626844-20626863 | MS.gene35040:intron | 30.0% | |
| TTGTATATTGAGGGTCTATT+TGG | - | chr4.4:20626271-20626290 | MS.gene35040:intron | 30.0% | |
| TTTGGGAAAGTAATTTGGTT+TGG | + | chr4.4:20625348-20625367 | None:intergenic | 30.0% | |
| ! | ACTATTTAGAGACCTTTTCT+TGG | - | chr4.4:20624480-20624499 | MS.gene35040:intron | 30.0% |
| ! | CTATTTAGAGACCTTTTCTT+GGG | - | chr4.4:20624481-20624500 | MS.gene35040:intron | 30.0% |
| ! | TGTAAGAGTAAAGTTTTCTC+CGG | + | chr4.4:20624899-20624918 | None:intergenic | 30.0% |
| ! | TTGGGAAAGTAATTTGGTTT+GGG | + | chr4.4:20625347-20625366 | None:intergenic | 30.0% |
| !! | AAAAAGTGCCATAGAATGAT+AGG | - | chr4.4:20626679-20626698 | MS.gene35040:intron | 30.0% |
| !! | AAAAGTGCCATAGAATGATA+GGG | - | chr4.4:20626680-20626699 | MS.gene35040:intron | 30.0% |
| !! | AATGCTTGTTGATTTCTGAA+TGG | - | chr4.4:20626602-20626621 | MS.gene35040:intron | 30.0% |
| !! | AGGTTATTCTGATTTTGAGA+TGG | - | chr4.4:20625297-20625316 | MS.gene35040:intron | 30.0% |
| !! | AGTTAGTTGTTTGTTGTGTT+AGG | - | chr4.4:20626819-20626838 | MS.gene35040:intron | 30.0% |
| !! | ATGCTTGTTGATTTCTGAAT+GGG | - | chr4.4:20626603-20626622 | MS.gene35040:intron | 30.0% |
| !! | GTTGGTTTCTTTTCGTTTTT+TGG | - | chr4.4:20626018-20626037 | MS.gene35040:intron | 30.0% |
| !! | TATTGTGATGGATGATATTC+AGG | - | chr4.4:20623900-20623919 | MS.gene35040:intron | 30.0% |
| !! | TTTAGATCTTTTGAGTCCAT+GGG | + | chr4.4:20625633-20625652 | None:intergenic | 30.0% |
| !!! | AAGTTGTGTTTTAGTCCTTT+GGG | + | chr4.4:20624429-20624448 | None:intergenic | 30.0% |
| !!! | GAAGTTGATGCATACATTTT+TGG | - | chr4.4:20627683-20627702 | MS.gene35040:CDS | 30.0% |
| !!! | GGTTATTCTGATTTTGAGAT+GGG | - | chr4.4:20625298-20625317 | MS.gene35040:intron | 30.0% |
| AAGCACCTGTAAAACTGTTT+GGG | - | chr4.4:20626324-20626343 | MS.gene35040:intron | 35.0% | |
| ATTGCTCCATGAAATTAACC+GGG | + | chr4.4:20625448-20625467 | None:intergenic | 35.0% | |
| ATTTACTAGGATTGTCCCAA+AGG | - | chr4.4:20624411-20624430 | MS.gene35040:intron | 35.0% | |
| CACAAATACAACCCAAGAAA+AGG | + | chr4.4:20624495-20624514 | None:intergenic | 35.0% | |
| CCATTCATAGCATTCATTCT+AGG | + | chr4.4:20625419-20625438 | None:intergenic | 35.0% | |
| CCTAGAATGAATGCTATGAA+TGG | - | chr4.4:20625416-20625435 | MS.gene35040:intron | 35.0% | |
| CTACTGTATACCTTCCTAAT+AGG | + | chr4.4:20626717-20626736 | None:intergenic | 35.0% | |
| CTTCAATTGAGAATTTGGAG+AGG | - | chr4.4:20623821-20623840 | MS.gene35040:CDS | 35.0% | |
| GCATTTCTTCTTGATTGTGT+AGG | - | chr4.4:20627298-20627317 | MS.gene35040:CDS | 35.0% | |
| GGCATTAATAATTTCCCATC+AGG | + | chr4.4:20624590-20624609 | None:intergenic | 35.0% | |
| GTCATAAGGTTAGTAGTAGA+AGG | - | chr4.4:20626858-20626877 | MS.gene35040:intron | 35.0% | |
| GTGATTTCGGCAAATTTACT+AGG | - | chr4.4:20624398-20624417 | MS.gene35040:intron | 35.0% | |
| GTTAACCAGACTATGATACT+AGG | - | chr4.4:20626132-20626151 | MS.gene35040:intron | 35.0% | |
| TAAGCACCTGTAAAACTGTT+TGG | - | chr4.4:20626323-20626342 | MS.gene35040:intron | 35.0% | |
| TACCTCAGATTTACTCTTCA+TGG | + | chr4.4:20627185-20627204 | None:intergenic | 35.0% | |
| TACTTACTGGAGCCATAAAT+CGG | + | chr4.4:20623709-20623728 | None:intergenic | 35.0% | |
| TATCCAGCAATTCAACGTTT+AGG | + | chr4.4:20626583-20626602 | None:intergenic | 35.0% | |
| TATCGCACTTTATAGGTGTT+TGG | + | chr4.4:20624800-20624819 | None:intergenic | 35.0% | |
| TCAATTGAGATGCCAATATC+AGG | + | chr4.4:20625488-20625507 | None:intergenic | 35.0% | |
| TCACTGGATTTAGCAGAAAT+CGG | + | chr4.4:20623673-20623692 | None:intergenic | 35.0% | |
| TCATCATCATCTTCTTCTTC+CGG | - | chr4.4:20623958-20623977 | MS.gene35040:intron | 35.0% | |
| TGAAAACTGTCTCCTTGAAT+TGG | + | chr4.4:20625890-20625909 | None:intergenic | 35.0% | |
| TGAAGAAGGTTTCCAAGTTA+AGG | - | chr4.4:20623479-20623498 | MS.gene35040:CDS | 35.0% | |
| TGGCTCTCTTAAAAATTACG+AGG | - | chr4.4:20625172-20625191 | MS.gene35040:intron | 35.0% | |
| TTACTTTCCCAAAAACAAGG+TGG | - | chr4.4:20625355-20625374 | MS.gene35040:intron | 35.0% | |
| TTATTTCCATTAGCGCTCAA+TGG | - | chr4.4:20626414-20626433 | MS.gene35040:intron | 35.0% | |
| TTCAACGTTTAGGTCCTATT+TGG | + | chr4.4:20626573-20626592 | None:intergenic | 35.0% | |
| TTGATTGTGTAGGCACATAT+GGG | - | chr4.4:20627308-20627327 | MS.gene35040:CDS | 35.0% | |
| TTGATTTCTGAATGGGGAAT+GGG | - | chr4.4:20626610-20626629 | MS.gene35040:intron | 35.0% | |
| TTGCATCAAAAGCCAAAAAC+AGG | + | chr4.4:20624133-20624152 | None:intergenic | 35.0% | |
| ! | AAAGTGCCATAGAATGATAG+GGG | - | chr4.4:20626681-20626700 | MS.gene35040:intron | 35.0% |
| ! | AACTGGTAGTCTTCTTTTAG+TGG | + | chr4.4:20627726-20627745 | None:intergenic | 35.0% |
| ! | AAGAAGACTACCAGTTTTTG+CGG | - | chr4.4:20627730-20627749 | MS.gene35040:CDS | 35.0% |
| ! | AGATAATTTTTGTGGAGTCC+AGG | - | chr4.4:20626890-20626909 | MS.gene35040:intron | 35.0% |
| ! | AGTAGTTCATTTTGTCCTGA+TGG | - | chr4.4:20624572-20624591 | MS.gene35040:intron | 35.0% |
| ! | CTATAGTTCTATACGCAGTT+GGG | - | chr4.4:20625974-20625993 | MS.gene35040:intron | 35.0% |
| ! | CTATTAGGAAGGTATACAGT+AGG | - | chr4.4:20626715-20626734 | MS.gene35040:intron | 35.0% |
| ! | GAAATACTTAACCGCTGATT+AGG | + | chr4.4:20627255-20627274 | None:intergenic | 35.0% |
| ! | GTAGTTCATTTTGTCCTGAT+GGG | - | chr4.4:20624573-20624592 | MS.gene35040:intron | 35.0% |
| ! | TCTATAGTTCTATACGCAGT+TGG | - | chr4.4:20625973-20625992 | MS.gene35040:intron | 35.0% |
| ! | TTGGTTCCTTTTAGTGCATA+AGG | - | chr4.4:20626037-20626056 | MS.gene35040:intron | 35.0% |
| ! | TTTTGCTAACCTGTACTTAC+TGG | + | chr4.4:20623722-20623741 | None:intergenic | 35.0% |
| !! | CTTTAGATCTTTTGAGTCCA+TGG | + | chr4.4:20625634-20625653 | None:intergenic | 35.0% |
| !! | GAAGAGTGTGTTGTTTAAGA+AGG | - | chr4.4:20624014-20624033 | MS.gene35040:intron | 35.0% |
| !! | TGCTTGTTGATTTCTGAATG+GGG | - | chr4.4:20626604-20626623 | MS.gene35040:intron | 35.0% |
| !! | TTAGATCTTTTGAGTCCATG+GGG | + | chr4.4:20625632-20625651 | None:intergenic | 35.0% |
| !! | TTGGTAGTGATTCCAAGTAT+AGG | - | chr4.4:20625277-20625296 | MS.gene35040:intron | 35.0% |
| !!! | CAAGTTGTGTTTTAGTCCTT+TGG | + | chr4.4:20624430-20624449 | None:intergenic | 35.0% |
| !!! | GAAACAACCACCTTGTTTTT+GGG | + | chr4.4:20625365-20625384 | None:intergenic | 35.0% |
| !!! | TGAAACAACCACCTTGTTTT+TGG | + | chr4.4:20625366-20625385 | None:intergenic | 35.0% |
| AAACTACCATTGAGCGCTAA+TGG | + | chr4.4:20626423-20626442 | None:intergenic | 40.0% | |
| AAACTGTCTCCTTGAATTGG+TGG | + | chr4.4:20625887-20625906 | None:intergenic | 40.0% | |
| AATAGTAGCTTCAGTTCTCG+CGG | - | chr4.4:20623775-20623794 | MS.gene35040:CDS | 40.0% | |
| ACAGAGAGAGAGAGAATGAT+TGG | + | chr4.4:20626247-20626266 | None:intergenic | 40.0% | |
| ACTAGGATCTCCTATTAGGA+AGG | - | chr4.4:20626704-20626723 | MS.gene35040:intron | 40.0% | |
| AGGTGCGATGATTTACTTCA+CGG | + | chr4.4:20625084-20625103 | None:intergenic | 40.0% | |
| ATATCGCAATGCGTGTTCTA+AGG | + | chr4.4:20624875-20624894 | None:intergenic | 40.0% | |
| ATGTCCATAAGTGTGTAACG+TGG | - | chr4.4:20624991-20625010 | MS.gene35040:intron | 40.0% | |
| ATTGAGATGCCAATATCAGG+CGG | + | chr4.4:20625485-20625504 | None:intergenic | 40.0% | |
| CAACAGGCAAATTTCCTATC+TGG | + | chr4.4:20625260-20625279 | None:intergenic | 40.0% | |
| CACTATAAATTGGACCATCC+TGG | - | chr4.4:20625038-20625057 | MS.gene35040:intron | 40.0% | |
| CAGATAGGAAATTTGCCTGT+TGG | - | chr4.4:20625258-20625277 | MS.gene35040:intron | 40.0% | |
| CTAAAACAATCGCGCATTAG+AGG | + | chr4.4:20624611-20624630 | None:intergenic | 40.0% | |
| CTCCATGAAGAGTAAATCTG+AGG | - | chr4.4:20627180-20627199 | MS.gene35040:CDS | 40.0% | |
| CTTAAACAACACACTCTTCG+AGG | + | chr4.4:20624013-20624032 | None:intergenic | 40.0% | |
| CTTGATTGTGTAGGCACATA+TGG | - | chr4.4:20627307-20627326 | MS.gene35040:CDS | 40.0% | |
| CTTGTTTAATTGGGCCAGAT+AGG | - | chr4.4:20625243-20625262 | MS.gene35040:intron | 40.0% | |
| GAACAACAGCAAGATGAAGA+AGG | - | chr4.4:20623465-20623484 | MS.gene35040:CDS | 40.0% | |
| GAACTCTGTCTGAACCATTT+GGG | + | chr4.4:20627652-20627671 | None:intergenic | 40.0% | |
| GAAGTAAATCATCGCACCTA+CGG | - | chr4.4:20625085-20625104 | MS.gene35040:intron | 40.0% | |
| GTTACACACTTATGGACATC+TGG | + | chr4.4:20624990-20625009 | None:intergenic | 40.0% | |
| TACATTCGGATGCTAGAGTT+TGG | - | chr4.4:20626634-20626653 | MS.gene35040:intron | 40.0% | |
| TACTTGGAATCACTACCAAC+AGG | + | chr4.4:20625276-20625295 | None:intergenic | 40.0% | |
| TAGGTGTTTGGACACAGATA+AGG | + | chr4.4:20624788-20624807 | None:intergenic | 40.0% | |
| TCATCCAACTCGATCATCAA+TGG | + | chr4.4:20623526-20623545 | None:intergenic | 40.0% | |
| TCATCCACGTTACACACTTA+TGG | + | chr4.4:20624998-20625017 | None:intergenic | 40.0% | |
| TGATTTCTGAATGGGGAATG+GGG | - | chr4.4:20626611-20626630 | MS.gene35040:intron | 40.0% | |
| TGGTGAGGAAGTTATTGTGA+TGG | - | chr4.4:20623888-20623907 | MS.gene35040:intron | 40.0% | |
| TTTATGGCTCCAGTAAGTAC+AGG | - | chr4.4:20623710-20623729 | MS.gene35040:CDS | 40.0% | |
| ! | AAGGAGACAGTTTTCATACG+AGG | - | chr4.4:20625894-20625913 | MS.gene35040:intron | 40.0% |
| ! | ATTGCAAGTCTTGTGACTAC+AGG | + | chr4.4:20627419-20627438 | None:intergenic | 40.0% |
| ! | CATTTGTTTGGAATTACGGC+GGG | - | chr4.4:20624638-20624657 | MS.gene35040:intron | 40.0% |
| ! | GCATTTGTTTGGAATTACGG+CGG | - | chr4.4:20624637-20624656 | MS.gene35040:intron | 40.0% |
| ! | GGTAGTCTTCTTTTAGTGGT+CGG | + | chr4.4:20627722-20627741 | None:intergenic | 40.0% |
| ! | GTTGATTTCTGAATGGGGAA+TGG | - | chr4.4:20626609-20626628 | MS.gene35040:intron | 40.0% |
| ! | TAGGAAGGTATACAGTAGGA+GGG | - | chr4.4:20626719-20626738 | MS.gene35040:intron | 40.0% |
| ! | TGAGTCTTTGTTGTCATTGC+TGG | - | chr4.4:20626099-20626118 | MS.gene35040:intron | 40.0% |
| ! | TGATGGATGATATTCAGGTG+AGG | - | chr4.4:20623905-20623924 | MS.gene35040:intron | 40.0% |
| ! | TTAGGAAGGTATACAGTAGG+AGG | - | chr4.4:20626718-20626737 | MS.gene35040:intron | 40.0% |
| ! | TTTCTAGTCAATCGCGCATT+AGG | + | chr4.4:20624671-20624690 | None:intergenic | 40.0% |
| !! | AATGCGTGTTCTAAGGTGTT+TGG | + | chr4.4:20624868-20624887 | None:intergenic | 40.0% |
| !! | ATCGAGTTGGATGATAACAG+AGG | - | chr4.4:20623532-20623551 | MS.gene35040:CDS | 40.0% |
| !! | CTATTGCTTTTGCCAAATCC+CGG | - | chr4.4:20624366-20624385 | MS.gene35040:intron | 40.0% |
| !! | GAGTGTGTTGTTTAAGAAGG+AGG | - | chr4.4:20624017-20624036 | MS.gene35040:CDS | 40.0% |
| !! | GGATGCTTTACTGACTTGTT+TGG | + | chr4.4:20624767-20624786 | None:intergenic | 40.0% |
| AAGATCTCCGGTTCAAATCC+AGG | + | chr4.4:20625059-20625078 | None:intergenic | 45.0% | |
| AAGTATTTAGCGAGCTGCGA+CGG | + | chr4.4:20623637-20623656 | None:intergenic | 45.0% | |
| AATGGGGAATGGGGTACATT+CGG | - | chr4.4:20626620-20626639 | MS.gene35040:intron | 45.0% | |
| AGGTATACAGTAGGAGGGAT+AGG | - | chr4.4:20626724-20626743 | MS.gene35040:intron | 45.0% | |
| AGTAATGTATGGGTACCCCA+TGG | - | chr4.4:20625614-20625633 | MS.gene35040:intron | 45.0% | |
| ATACAGTAGGAGGGATAGGA+GGG | - | chr4.4:20626728-20626747 | MS.gene35040:intron | 45.0% | |
| ATGAAGCTCTTCTCTTCCGT+GGG | + | chr4.4:20627149-20627168 | None:intergenic | 45.0% | |
| ATGTATCAAACGCCGGTGAA+GGG | - | chr4.4:20623865-20623884 | MS.gene35040:CDS | 45.0% | |
| ATTGAGGTTGTCCTCCCAAA+TGG | - | chr4.4:20627635-20627654 | MS.gene35040:CDS | 45.0% | |
| CAAACTATCTGGCCACACTT+TGG | + | chr4.4:20626160-20626179 | None:intergenic | 45.0% | |
| CAATCAACAACGATGAGTCC+AGG | - | chr4.4:20623568-20623587 | MS.gene35040:CDS | 45.0% | |
| CACCTACGGTCTATCCAATT+GGG | - | chr4.4:20625099-20625118 | MS.gene35040:intron | 45.0% | |
| CCAGACACATACACCCTTAT+TGG | + | chr4.4:20624537-20624556 | None:intergenic | 45.0% | |
| CCATAGAATGATAGGGGACT+AGG | - | chr4.4:20626687-20626706 | MS.gene35040:intron | 45.0% | |
| CCTAGTCCCCTATCATTCTA+TGG | + | chr4.4:20626690-20626709 | None:intergenic | 45.0% | |
| CGGAGAATTGAATGAGTCAC+TGG | + | chr4.4:20623689-20623708 | None:intergenic | 45.0% | |
| CGTTGCGACAAAATTTCTCG+CGG | + | chr4.4:20624739-20624758 | None:intergenic | 45.0% | |
| CTCGTTCGAAGTCCTTAACT+TGG | + | chr4.4:20623494-20623513 | None:intergenic | 45.0% | |
| CTGCAACCCGGTTAATTTCA+TGG | - | chr4.4:20625439-20625458 | MS.gene35040:intron | 45.0% | |
| CTGGACTCATCGTTGTTGAT+TGG | + | chr4.4:20623570-20623589 | None:intergenic | 45.0% | |
| CTGTTCTTTCCTCCTGACAT+TGG | + | chr4.4:20623931-20623950 | None:intergenic | 45.0% | |
| GAACACGCATTGCGATATAC+CGG | - | chr4.4:20624877-20624896 | MS.gene35040:intron | 45.0% | |
| GGAACTCTGTCTGAACCATT+TGG | + | chr4.4:20627653-20627672 | None:intergenic | 45.0% | |
| GGACCTAAACGTTGAATTGC+TGG | - | chr4.4:20626577-20626596 | MS.gene35040:intron | 45.0% | |
| GGTTTCCTTCCACCAATTCA+AGG | - | chr4.4:20625875-20625894 | MS.gene35040:intron | 45.0% | |
| GTAACAGAATGTCAGAGACC+TGG | + | chr4.4:20626911-20626930 | None:intergenic | 45.0% | |
| TACTTCACGGACAAGATCTC+CGG | + | chr4.4:20625071-20625090 | None:intergenic | 45.0% | |
| TATACAGTAGGAGGGATAGG+AGG | - | chr4.4:20626727-20626746 | MS.gene35040:intron | 45.0% | |
| TCATCTTCTTCTTCCGGTAG+AGG | - | chr4.4:20623964-20623983 | MS.gene35040:intron | 45.0% | |
| TCCAGATTCAGCTACTTCAG+CGG | + | chr4.4:20627396-20627415 | None:intergenic | 45.0% | |
| TGACGTCACGACTCCAATAA+GGG | - | chr4.4:20624521-20624540 | MS.gene35040:intron | 45.0% | |
| TGATACTAGGGTCCAAAGTG+TGG | - | chr4.4:20626145-20626164 | MS.gene35040:intron | 45.0% | |
| TGGACCCTAGTATCATAGTC+TGG | + | chr4.4:20626140-20626159 | None:intergenic | 45.0% | |
| TGGTATGATCCGCCTGATAT+TGG | - | chr4.4:20625473-20625492 | MS.gene35040:intron | 45.0% | |
| TGTCATTGCTGGACACGTAT+TGG | - | chr4.4:20626110-20626129 | MS.gene35040:intron | 45.0% | |
| TGTCTCCTTGAATTGGTGGA+AGG | + | chr4.4:20625883-20625902 | None:intergenic | 45.0% | |
| TTCAGACAGAGTTCCCTCTA+GGG | - | chr4.4:20627658-20627677 | MS.gene35040:CDS | 45.0% | |
| TTGCAAGCAAGCATCCTTGT+AGG | - | chr4.4:20625854-20625873 | MS.gene35040:intron | 45.0% | |
| TTGGTGGAAGGAAACCTACA+AGG | + | chr4.4:20625871-20625890 | None:intergenic | 45.0% | |
| ! | ATCCTTTTGCAGTTTGCCCA+CGG | - | chr4.4:20627130-20627149 | MS.gene35040:CDS | 45.0% |
| ! | CCAATAAGGGTGTATGTGTC+TGG | - | chr4.4:20624534-20624553 | MS.gene35040:intron | 45.0% |
| ! | CTTGCAAGTCTTGTGACTAC+AGG | + | chr4.4:20627533-20627552 | None:intergenic | 45.0% |
| ! | GCTCTCCCAAACAGTTTTAC+AGG | + | chr4.4:20626332-20626351 | None:intergenic | 45.0% |
| ! | TTCGCCATTGATGATCGAGT+TGG | - | chr4.4:20623519-20623538 | MS.gene35040:CDS | 45.0% |
| ACCTCAATGCCATCATCCAG+AGG | + | chr4.4:20627623-20627642 | None:intergenic | 50.0% | |
| ACTCTTCGAGGACGAAGAAG+AGG | + | chr4.4:20624001-20624020 | None:intergenic | 50.0% | |
| AGAAGGAGGTTTGCAGAGCA+TGG | - | chr4.4:20624031-20624050 | MS.gene35040:CDS | 50.0% | |
| AGAGCAGGACTGTGCTTGTA+TGG | - | chr4.4:20627344-20627363 | MS.gene35040:CDS | 50.0% | |
| ATACCTGACTGTCGCAAGAG+CGG | + | chr4.4:20625206-20625225 | None:intergenic | 50.0% | |
| ATTCAGGTGAGGCCAATGTC+AGG | - | chr4.4:20623916-20623935 | MS.gene35040:intron | 50.0% | |
| ATTCCAACACCATCAGCGAC+TGG | - | chr4.4:20627594-20627613 | MS.gene35040:CDS | 50.0% | |
| CAGGAACAATGCGGCTATCT+GGG | + | chr4.4:20627484-20627503 | None:intergenic | 50.0% | |
| CTCCCAATTGGATAGACCGT+AGG | + | chr4.4:20625104-20625123 | None:intergenic | 50.0% | |
| CTCTGTCTGAACCATTTGGG+AGG | + | chr4.4:20627649-20627668 | None:intergenic | 50.0% | |
| CTCTTCATGGAGAGACGACT+TGG | + | chr4.4:20627172-20627191 | None:intergenic | 50.0% | |
| CTGACGTCACGACTCCAATA+AGG | - | chr4.4:20624520-20624539 | MS.gene35040:intron | 50.0% | |
| GAAGGAGGTTTGCAGAGCAT+GGG | - | chr4.4:20624032-20624051 | MS.gene35040:CDS | 50.0% | |
| GATGAAGCTCTTCTCTTCCG+TGG | + | chr4.4:20627150-20627169 | None:intergenic | 50.0% | |
| GATGTATCAAACGCCGGTGA+AGG | - | chr4.4:20623864-20623883 | MS.gene35040:CDS | 50.0% | |
| GCACCTACGGTCTATCCAAT+TGG | - | chr4.4:20625098-20625117 | MS.gene35040:intron | 50.0% | |
| GCATCAACTTCCTCCCTAGA+GGG | + | chr4.4:20627674-20627693 | None:intergenic | 50.0% | |
| GGAAGATGAAGAGCCTCTAC+CGG | + | chr4.4:20623980-20623999 | None:intergenic | 50.0% | |
| GGACCATCCTGGATTTGAAC+CGG | - | chr4.4:20625049-20625068 | MS.gene35040:intron | 50.0% | |
| GGGGACTAGGATCTCCTATT+AGG | - | chr4.4:20626700-20626719 | MS.gene35040:intron | 50.0% | |
| GGTCTATCCAATTGGGAGTG+AGG | - | chr4.4:20625106-20625125 | MS.gene35040:intron | 50.0% | |
| GTTCAGACAGAGTTCCCTCT+AGG | - | chr4.4:20627657-20627676 | MS.gene35040:CDS | 50.0% | |
| TACAAGCACAGTCCTGCTCT+CGG | + | chr4.4:20627344-20627363 | None:intergenic | 50.0% | |
| TCAGGAACAATGCGGCTATC+CGG | + | chr4.4:20627371-20627390 | None:intergenic | 50.0% | |
| TCAGGAACAATGCGGCTATC+TGG | + | chr4.4:20627371-20627390 | None:intergenic | 50.0% | |
| TCCGCTGAAGTAGCTGAATC+TGG | - | chr4.4:20627392-20627411 | MS.gene35040:CDS | 50.0% | |
| TCTCCGGTTCAAATCCAGGA+TGG | + | chr4.4:20625055-20625074 | None:intergenic | 50.0% | |
| TGCATCAACTTCCTCCCTAG+AGG | + | chr4.4:20627675-20627694 | None:intergenic | 50.0% | |
| TGCTATGAATGGCTGCAACC+CGG | - | chr4.4:20625427-20625446 | MS.gene35040:intron | 50.0% | |
| TTCCGTGGGCAAACTGCAAA+AGG | + | chr4.4:20627135-20627154 | None:intergenic | 50.0% | |
| ! | ACCTCTGGATGATGGCATTG+AGG | - | chr4.4:20627619-20627638 | MS.gene35040:CDS | 50.0% |
| ! | AGTTATGGCGGGAACAAACC+TGG | + | chr4.4:20624092-20624111 | None:intergenic | 50.0% |
| ! | AGTTTTTGCGGCACTTTGCG+AGG | - | chr4.4:20627742-20627761 | MS.gene35040:CDS | 50.0% |
| ! | CAGCGGATTCAGGAACAATG+CGG | + | chr4.4:20627379-20627398 | None:intergenic | 50.0% |
| ! | CCTGGCATTTGGAGTCATAG+CGG | + | chr4.4:20624074-20624093 | None:intergenic | 50.0% |
| ! | GAATTGGCCTGAGTGTGATG+AGG | + | chr4.4:20627578-20627597 | None:intergenic | 50.0% |
| ! | GTCGCTGATGGTGTTGGAAT+TGG | + | chr4.4:20627594-20627613 | None:intergenic | 50.0% |
| ! | TAAGGGTGTATGTGTCTGGC+AGG | - | chr4.4:20624538-20624557 | MS.gene35040:intron | 50.0% |
| ! | TACGAGGTTTGCTTCTCTGC+AGG | - | chr4.4:20625910-20625929 | MS.gene35040:intron | 50.0% |
| ! | TCAGCTACTTCAGCGGATTC+AGG | + | chr4.4:20627389-20627408 | None:intergenic | 50.0% |
| !! | TCGCAAAGTGCCGCAAAAAC+TGG | + | chr4.4:20627743-20627762 | None:intergenic | 50.0% |
| AACAATGCGGCTATCTGGGC+TGG | + | chr4.4:20627480-20627499 | None:intergenic | 55.0% | |
| ACCGGCGTTTGATACATCCG+CGG | + | chr4.4:20623862-20623881 | None:intergenic | 55.0% | |
| ACTTCCTCACCACCCTTCAC+CGG | + | chr4.4:20623880-20623899 | None:intergenic | 55.0% | |
| AGGACTGTGCTTGTATGGCC+CGG | - | chr4.4:20627349-20627368 | MS.gene35040:CDS | 55.0% | |
| AGGTTCAGGCGAAGCTGGTT+GGG | + | chr4.4:20627444-20627463 | None:intergenic | 55.0% | |
| ATTCCCCCCTGAACTGTTGC+CGG | + | chr4.4:20623758-20623777 | None:intergenic | 55.0% | |
| CAGGAACAATGCGGCTATCC+GGG | + | chr4.4:20627370-20627389 | None:intergenic | 55.0% | |
| CCGCTATGACTCCAAATGCC+AGG | - | chr4.4:20624071-20624090 | MS.gene35040:intron | 55.0% | |
| CCTGAACTGTTGCCGGAGTA+CGG | + | chr4.4:20623751-20623770 | None:intergenic | 55.0% | |
| CGTACTCCGGCAACAGTTCA+GGG | - | chr4.4:20623749-20623768 | MS.gene35040:CDS | 55.0% | |
| GCAAAAACGCCACCGTACTC+CGG | - | chr4.4:20623736-20623755 | MS.gene35040:CDS | 55.0% | |
| GCATGAGTGCGATGAGGTTC+AGG | + | chr4.4:20627458-20627477 | None:intergenic | 55.0% | |
| GCCGAGAACTTCGACGTTAC+CGG | - | chr4.4:20623607-20623626 | MS.gene35040:CDS | 55.0% | |
| GCCGGTAACGTCGAAGTTCT+CGG | + | chr4.4:20623611-20623630 | None:intergenic | 55.0% | |
| GCCTGAACCTCATCACACTC+AGG | - | chr4.4:20627568-20627587 | MS.gene35040:CDS | 55.0% | |
| GCCTGAGTGTGATGAGGTTC+AGG | + | chr4.4:20627572-20627591 | None:intergenic | 55.0% | |
| GCGGGAACAAACCTGGCATT+TGG | + | chr4.4:20624085-20624104 | None:intergenic | 55.0% | |
| GGCAGATTATCTCCGAGAGC+AGG | - | chr4.4:20627329-20627348 | MS.gene35040:CDS | 55.0% | |
| GGTAACGTCGAAGTTCTCGG+CGG | + | chr4.4:20623608-20623627 | None:intergenic | 55.0% | |
| GTACTCCGGCAACAGTTCAG+GGG | - | chr4.4:20623750-20623769 | MS.gene35040:CDS | 55.0% | |
| TACTCCGGCAACAGTTCAGG+GGG | - | chr4.4:20623751-20623770 | MS.gene35040:CDS | 55.0% | |
| TATCAAACGCCGGTGAAGGG+TGG | - | chr4.4:20623868-20623887 | MS.gene35040:CDS | 55.0% | |
| TCCGCGGATGTATCAAACGC+CGG | - | chr4.4:20623858-20623877 | MS.gene35040:CDS | 55.0% | |
| TGAGGCGCGCAAAAATGCTG+CGG | - | chr4.4:20625124-20625143 | MS.gene35040:intron | 55.0% | |
| TGATGAGGTTCAGGCGAAGC+TGG | + | chr4.4:20627563-20627582 | None:intergenic | 55.0% | |
| TGCAGAGCATGGGAGGAATC+TGG | - | chr4.4:20624042-20624061 | MS.gene35040:CDS | 55.0% | |
| ! | AGACAGAGTTCCCTCTAGGG+AGG | - | chr4.4:20627661-20627680 | MS.gene35040:CDS | 55.0% |
| ! | GACTGGTCACCTCTGGATGA+TGG | - | chr4.4:20627611-20627630 | MS.gene35040:CDS | 55.0% |
| ! | TGACCAGTCGCTGATGGTGT+TGG | + | chr4.4:20627600-20627619 | None:intergenic | 55.0% |
| ACTCCGGCAACAGTTCAGGG+GGG | - | chr4.4:20623752-20623771 | MS.gene35040:CDS | 60.0% | |
| CAGAGGTGACCAGTCGCTGA+TGG | + | chr4.4:20627606-20627625 | None:intergenic | 60.0% | |
| CAGGTGAGGCCAATGTCAGG+AGG | - | chr4.4:20623919-20623938 | MS.gene35040:intron | 60.0% | |
| CCGAAATCACGGTGAGACGC+CGG | + | chr4.4:20624388-20624407 | None:intergenic | 60.0% | |
| CCGGCGTCTCACCGTGATTT+CGG | - | chr4.4:20624385-20624404 | MS.gene35040:intron | 60.0% | |
| CCGTACTCCGGCAACAGTTC+AGG | - | chr4.4:20623748-20623767 | MS.gene35040:CDS | 60.0% | |
| CGAAATCACGGTGAGACGCC+GGG | + | chr4.4:20624387-20624406 | None:intergenic | 60.0% | |
| CGATGAGGTTCAGGCGAAGC+TGG | + | chr4.4:20627449-20627468 | None:intergenic | 60.0% | |
| GAACTGTTGCCGGAGTACGG+TGG | + | chr4.4:20623748-20623767 | None:intergenic | 60.0% | |
| GACTGTCGCAAGAGCGGTGA+GGG | + | chr4.4:20625200-20625219 | None:intergenic | 60.0% | |
| GAGGTTCAGGCGAAGCTGGT+TGG | + | chr4.4:20627445-20627464 | None:intergenic | 60.0% | |
| GCGGCGTAGGGTTGAAAACC+TGG | + | chr4.4:20623589-20623608 | None:intergenic | 60.0% | |
| GGAGGTTTGCAGAGCATGGG+AGG | - | chr4.4:20624035-20624054 | MS.gene35040:CDS | 60.0% | |
| TCACCGCTCTTGCGACAGTC+AGG | - | chr4.4:20625200-20625219 | MS.gene35040:intron | 60.0% | |
| TCGAAGTTCTCGGCGGCGTA+GGG | + | chr4.4:20623601-20623620 | None:intergenic | 60.0% | |
| TGACTGTCGCAAGAGCGGTG+AGG | + | chr4.4:20625201-20625220 | None:intergenic | 60.0% | |
| TTGCGCGCCTCACTCCCAAT+TGG | + | chr4.4:20625116-20625135 | None:intergenic | 60.0% | |
| ! | CATCAGCGACTGGTCACCTC+TGG | - | chr4.4:20627604-20627623 | MS.gene35040:CDS | 60.0% |
| AACGCCGGTGAAGGGTGGTG+AGG | - | chr4.4:20623873-20623892 | MS.gene35040:CDS | 65.0% | |
| CACGGTGAGACGCCGGGATT+TGG | + | chr4.4:20624381-20624400 | None:intergenic | 65.0% | |
| GGAAGCAGCTCTCGTCTCCG+CGG | - | chr4.4:20623842-20623861 | MS.gene35040:CDS | 65.0% | |
| GTCGAAGTTCTCGGCGGCGT+AGG | + | chr4.4:20623602-20623621 | None:intergenic | 65.0% | |
| ! | GGGCTGGCATGAGTGCGATG+AGG | + | chr4.4:20627464-20627483 | None:intergenic | 65.0% |
| AGCGAGCTGCGACGGCGAGC+CGG | + | chr4.4:20623629-20623648 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20623445 | 20627772 | 20623445 | ID=MS.gene35040 |
| chr4.4 | mRNA | 20623445 | 20627772 | 20623445 | ID=MS.gene35040.t1;Parent=MS.gene35040 |
| chr4.4 | exon | 20627125 | 20627772 | 20627125 | ID=MS.gene35040.t1.exon1;Parent=MS.gene35040.t1 |
| chr4.4 | CDS | 20627125 | 20627772 | 20627125 | ID=cds.MS.gene35040.t1;Parent=MS.gene35040.t1 |
| chr4.4 | exon | 20624016 | 20624075 | 20624016 | ID=MS.gene35040.t1.exon2;Parent=MS.gene35040.t1 |
| chr4.4 | CDS | 20624016 | 20624075 | 20624016 | ID=cds.MS.gene35040.t1;Parent=MS.gene35040.t1 |
| chr4.4 | exon | 20623445 | 20623897 | 20623445 | ID=MS.gene35040.t1.exon3;Parent=MS.gene35040.t1 |
| chr4.4 | CDS | 20623445 | 20623897 | 20623445 | ID=cds.MS.gene35040.t1;Parent=MS.gene35040.t1 |
| Gene Sequence |
| Protein sequence |
