Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35262.t1 | XP_003612815.1 | 97.1 | 801 | 21 | 1 | 30 | 830 | 2 | 800 | 0.00E+00 | 1571.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35262.t1 | Q336N8 | 53.0 | 761 | 306 | 10 | 33 | 773 | 6 | 734 | 1.5e-206 | 721.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35262.t1 | G7KCC8 | 97.1 | 801 | 21 | 1 | 30 | 830 | 2 | 800 | 0.0e+00 | 1571.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene35262.t1 | TR | Jumonji |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35262.t1 | MTR_5g029370 | 97.004 | 801 | 22 | 1 | 30 | 830 | 2 | 800 | 0.0 | 1623 |
| MS.gene35262.t1 | MTR_5g029370 | 97.004 | 801 | 22 | 1 | 30 | 830 | 2 | 800 | 0.0 | 1623 |
| MS.gene35262.t1 | MTR_1g038400 | 57.645 | 484 | 204 | 1 | 99 | 581 | 10 | 493 | 0.0 | 583 |
| MS.gene35262.t1 | MTR_1g038370 | 51.230 | 488 | 211 | 4 | 111 | 597 | 2 | 463 | 3.73e-174 | 514 |
| MS.gene35262.t1 | MTR_3g075210 | 43.200 | 375 | 195 | 7 | 110 | 472 | 11 | 379 | 2.09e-80 | 284 |
| MS.gene35262.t1 | MTR_8g089260 | 37.717 | 403 | 172 | 10 | 114 | 448 | 30 | 421 | 5.75e-61 | 224 |
| MS.gene35262.t1 | MTR_1g078070 | 30.450 | 578 | 309 | 17 | 88 | 587 | 121 | 683 | 1.18e-60 | 223 |
| MS.gene35262.t1 | MTR_1g078070 | 30.450 | 578 | 309 | 17 | 88 | 587 | 121 | 683 | 1.61e-60 | 224 |
| MS.gene35262.t1 | MTR_2g047130 | 35.732 | 403 | 180 | 9 | 114 | 448 | 49 | 440 | 1.74e-58 | 216 |
| MS.gene35262.t1 | MTR_2g047130 | 35.732 | 403 | 180 | 9 | 114 | 448 | 46 | 437 | 1.86e-58 | 216 |
| MS.gene35262.t1 | MTR_7g407000 | 64.286 | 140 | 32 | 2 | 294 | 432 | 32 | 154 | 1.82e-57 | 194 |
| MS.gene35262.t1 | MTR_1g094740 | 51.064 | 188 | 88 | 1 | 261 | 448 | 291 | 474 | 2.27e-57 | 214 |
| MS.gene35262.t1 | MTR_5g010300 | 36.148 | 379 | 201 | 12 | 186 | 539 | 291 | 653 | 9.19e-54 | 203 |
| MS.gene35262.t1 | MTR_5g010300 | 36.148 | 379 | 201 | 12 | 186 | 539 | 291 | 653 | 1.14e-53 | 203 |
| MS.gene35262.t1 | MTR_5g010300 | 36.148 | 379 | 201 | 12 | 186 | 539 | 291 | 653 | 1.14e-53 | 203 |
| MS.gene35262.t1 | MTR_5g010300 | 36.043 | 369 | 196 | 11 | 186 | 530 | 291 | 643 | 8.07e-53 | 201 |
| MS.gene35262.t1 | MTR_7g097070 | 28.743 | 334 | 219 | 9 | 265 | 587 | 338 | 663 | 9.21e-33 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35262.t1 | AT5G46910 | 60.477 | 754 | 246 | 11 | 34 | 769 | 5 | 724 | 0.0 | 901 |
| MS.gene35262.t1 | AT5G46910 | 67.208 | 616 | 181 | 5 | 34 | 632 | 5 | 616 | 0.0 | 869 |
| MS.gene35262.t1 | AT3G48430 | 38.522 | 379 | 185 | 8 | 110 | 448 | 13 | 383 | 1.24e-67 | 245 |
| MS.gene35262.t1 | AT1G30810 | 36.090 | 399 | 186 | 9 | 114 | 452 | 56 | 445 | 1.36e-61 | 223 |
| MS.gene35262.t1 | AT1G30810 | 36.090 | 399 | 186 | 9 | 114 | 452 | 56 | 445 | 1.36e-61 | 223 |
| MS.gene35262.t1 | AT1G30810 | 36.090 | 399 | 186 | 9 | 114 | 452 | 56 | 445 | 1.36e-61 | 223 |
| MS.gene35262.t1 | AT2G34880 | 31.520 | 533 | 275 | 12 | 114 | 573 | 58 | 573 | 2.35e-61 | 223 |
| MS.gene35262.t1 | AT4G20400 | 34.729 | 406 | 189 | 9 | 114 | 453 | 53 | 448 | 8.45e-61 | 223 |
| MS.gene35262.t1 | AT1G08620 | 31.071 | 560 | 285 | 18 | 114 | 587 | 143 | 687 | 6.97e-60 | 222 |
| MS.gene35262.t1 | AT1G08620 | 31.071 | 560 | 285 | 18 | 114 | 587 | 143 | 687 | 6.97e-60 | 222 |
| MS.gene35262.t1 | AT1G08620 | 31.071 | 560 | 285 | 18 | 114 | 587 | 143 | 687 | 6.97e-60 | 222 |
| MS.gene35262.t1 | AT1G08620 | 31.071 | 560 | 285 | 18 | 114 | 587 | 157 | 701 | 7.10e-60 | 222 |
| MS.gene35262.t1 | AT1G63490 | 38.790 | 281 | 148 | 4 | 185 | 449 | 35 | 307 | 1.28e-58 | 218 |
| MS.gene35262.t1 | AT1G63490 | 38.790 | 281 | 148 | 4 | 185 | 449 | 288 | 560 | 1.47e-58 | 218 |
| MS.gene35262.t1 | AT1G63490 | 38.790 | 281 | 148 | 4 | 185 | 449 | 288 | 560 | 1.58e-58 | 218 |
| MS.gene35262.t1 | AT4G20400 | 34.430 | 395 | 183 | 9 | 125 | 453 | 7 | 391 | 5.15e-57 | 211 |
| MS.gene35262.t1 | AT5G04240 | 50.532 | 188 | 89 | 1 | 261 | 448 | 259 | 442 | 6.02e-56 | 210 |
| MS.gene35262.t1 | AT2G38950 | 25.719 | 556 | 334 | 18 | 111 | 608 | 102 | 636 | 2.34e-36 | 147 |
| MS.gene35262.t1 | AT1G63490 | 48.913 | 92 | 47 | 0 | 358 | 449 | 10 | 101 | 3.75e-24 | 109 |
Find 182 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTATAGACAGGGACTTTA+TGG | 0.160704 | 5.4:-19601260 | None:intergenic |
| ATTCTGATTCAGGAATATTT+AGG | 0.200884 | 5.4:+19603331 | MS.gene35262:CDS |
| CAAATCAACTTTGCGTCTAT+TGG | 0.212579 | 5.4:+19600760 | MS.gene35262:CDS |
| AAGGATATGAATACATATTT+TGG | 0.248625 | 5.4:-19602786 | None:intergenic |
| ATATCAACTTTATGATTAAC+AGG | 0.250912 | 5.4:-19603670 | None:intergenic |
| CAATAGACGCAAAGTTGATT+TGG | 0.257289 | 5.4:-19600759 | None:intergenic |
| ACATTGCCCCGGTGATTCTT+TGG | 0.258512 | 5.4:-19598753 | None:intergenic |
| TTATGGTCCATCAAAATATT+AGG | 0.259778 | 5.4:-19601243 | None:intergenic |
| TACACAGAATCAATTTGTTT+TGG | 0.262680 | 5.4:+19602930 | MS.gene35262:CDS |
| GACAGTGATGATTCTGATTC+AGG | 0.278508 | 5.4:+19603321 | MS.gene35262:CDS |
| ATTCCGTGAATATGAGAAAA+TGG | 0.282693 | 5.4:+19600373 | MS.gene35262:CDS |
| GGAGATATGCACTTCTTAAC+AGG | 0.291071 | 5.4:+19601529 | MS.gene35262:CDS |
| GGATTATTTGTTGGCAATCC+TGG | 0.297750 | 5.4:-19602898 | None:intergenic |
| GCTCCAGAAGCTTCTAAATA+TGG | 0.300151 | 5.4:+19599308 | MS.gene35262:CDS |
| GGAAATTGGTCGTGGGAAAA+TGG | 0.302113 | 5.4:+19600472 | MS.gene35262:CDS |
| ATCACTGTCATTATCCACTA+TGG | 0.307424 | 5.4:-19603307 | None:intergenic |
| CCATAAAGTCCCTGTCTATA+AGG | 0.310054 | 5.4:+19601260 | MS.gene35262:CDS |
| GTGCAGACTGCCCAAATGTT+AGG | 0.320819 | 5.4:-19604090 | None:intergenic |
| TAAGTTTGATACAAGCGATT+TGG | 0.321047 | 5.4:+19599199 | MS.gene35262:CDS |
| TGTAGGCAAGCCCTAACATT+TGG | 0.329953 | 5.4:+19604079 | MS.gene35262:intron |
| TTCTGATTCAGGAATATTTA+GGG | 0.330786 | 5.4:+19603332 | MS.gene35262:CDS |
| GCCTCTCCGCCTTGCTGAAT+GGG | 0.334178 | 5.4:+19600223 | MS.gene35262:CDS |
| ACGTCAGACACTTCTGGTTT+AGG | 0.338162 | 5.4:-19602970 | None:intergenic |
| GAGAGAGGATATTACGGATA+TGG | 0.346339 | 5.4:+19602693 | MS.gene35262:CDS |
| CTTACTTGGAAAAGGAGTTT+TGG | 0.351864 | 5.4:+19600447 | MS.gene35262:CDS |
| TCAAGTTTAAGCTCACAATA+AGG | 0.353382 | 5.4:-19602850 | None:intergenic |
| CTTTGCAAAGAAGTTCTTCA+TGG | 0.354153 | 5.4:-19601566 | None:intergenic |
| AGCCTCTCCGCCTTGCTGAA+TGG | 0.359090 | 5.4:+19600222 | MS.gene35262:CDS |
| TTGGTGATTGGTTTCCTCTC+GGG | 0.363286 | 5.4:+19601493 | MS.gene35262:CDS |
| AATAGACGCAAAGTTGATTT+GGG | 0.363852 | 5.4:-19600758 | None:intergenic |
| ATACCATATTTAGAAGCTTC+TGG | 0.364051 | 5.4:-19599311 | None:intergenic |
| TTGAGTGCTTCTGTACCTGC+TGG | 0.368641 | 5.4:+19600149 | MS.gene35262:CDS |
| GGAGAATACACAGGACATTC+TGG | 0.368911 | 5.4:-19599239 | None:intergenic |
| CCACACTCTGGATTATTTGT+TGG | 0.370348 | 5.4:-19602907 | None:intergenic |
| AAGGAAACGTCAGACACTTC+TGG | 0.371873 | 5.4:-19602976 | None:intergenic |
| TATTATTTCAGAAACTTTCC+CGG | 0.373608 | 5.4:+19600732 | MS.gene35262:intron |
| AACAGATTTGCAAGGGGAAA+TGG | 0.376372 | 5.4:+19603709 | MS.gene35262:CDS |
| CCTTGCAAATCTGTTCTTCG+AGG | 0.382466 | 5.4:-19603701 | None:intergenic |
| GGAGGAATTTGAAGATCCTT+TGG | 0.383247 | 5.4:+19599268 | MS.gene35262:CDS |
| CAATCTGAGGAGGTTAGAAA+TGG | 0.383523 | 5.4:+19599005 | MS.gene35262:CDS |
| TCCACTATGGGCTTGATGTC+AGG | 0.386848 | 5.4:-19603294 | None:intergenic |
| ATTATGCTTTGCGTTGATAT+CGG | 0.387143 | 5.4:+19598717 | None:intergenic |
| CTTGGTGATTGGTTTCCTCT+CGG | 0.388410 | 5.4:+19601492 | MS.gene35262:CDS |
| TGAGCAGGAAGATGGGATAT+TGG | 0.390426 | 5.4:+19602735 | MS.gene35262:CDS |
| TCTTCAAATTCCTCCTTTGT+TGG | 0.392588 | 5.4:-19599260 | None:intergenic |
| TGGAGCCTTTGACGTTCTCT+TGG | 0.392797 | 5.4:+19601200 | MS.gene35262:CDS |
| GGAGCCTTTGACGTTCTCTT+GGG | 0.394203 | 5.4:+19601201 | MS.gene35262:CDS |
| ATGTCTTCCTGCCACTTACT+TGG | 0.401021 | 5.4:+19600433 | MS.gene35262:CDS |
| GCAAAGTTGATTTGGGTAAC+CGG | 0.403678 | 5.4:-19600751 | None:intergenic |
| GAAAAGAAATCTGAAGGTTA+TGG | 0.414459 | 5.4:+19603383 | MS.gene35262:CDS |
| ATATTTATCACTTGATTCAC+TGG | 0.418019 | 5.4:-19603644 | None:intergenic |
| TATCCCTGGTCACGCAGCTT+TGG | 0.422015 | 5.4:+19601113 | MS.gene35262:CDS |
| TTCAAAACATTCTGAGCAGC+AGG | 0.432668 | 5.4:+19603407 | MS.gene35262:CDS |
| GTAGGCAAGCCCTAACATTT+GGG | 0.434796 | 5.4:+19604080 | MS.gene35262:intron |
| ATCAGCTTGGGAACAGCAAA+TGG | 0.440002 | 5.4:+19600552 | MS.gene35262:CDS |
| TCTATTGGAAACGTCAATTC+CGG | 0.440096 | 5.4:+19600775 | MS.gene35262:CDS |
| TTATCTGAGAGAGGATATTA+CGG | 0.445667 | 5.4:+19602687 | MS.gene35262:CDS |
| CTGCACGGGTGGTGATCCTT+AGG | 0.446893 | 5.4:+19604107 | MS.gene35262:CDS |
| TGAAACATCTTACAGGTAGA+AGG | 0.451605 | 5.4:+19598969 | MS.gene35262:intron |
| TTGTCAAGTGATGGAGAAGA+TGG | 0.453056 | 5.4:+19601180 | MS.gene35262:CDS |
| TTGATACAAGCGATTTGGAT+TGG | 0.454805 | 5.4:+19599204 | MS.gene35262:CDS |
| TGAGTGCTTCTGTACCTGCT+GGG | 0.455362 | 5.4:+19600150 | MS.gene35262:CDS |
| AATTCCAAAGCTGCGTGACC+AGG | 0.455551 | 5.4:-19601117 | None:intergenic |
| AAGAGTGGATGCAGCAGAAA+AGG | 0.456673 | 5.4:-19602995 | None:intergenic |
| CGCAGCTTTGGAATTTGAAA+GGG | 0.456897 | 5.4:+19601125 | MS.gene35262:CDS |
| GCTTTGCGTTGATATCGGTT+TGG | 0.460073 | 5.4:+19598722 | MS.gene35262:CDS |
| GTTGGTTACTAATGAAATCA+AGG | 0.462719 | 5.4:+19601712 | MS.gene35262:CDS |
| AAGCCTGCATGGTACGCTCT+AGG | 0.463569 | 5.4:-19601318 | None:intergenic |
| GTTTCCAGCATTGTGCTAGT+TGG | 0.477992 | 5.4:+19601694 | MS.gene35262:CDS |
| AAGATGTTTGAGCAGGAAGA+TGG | 0.480595 | 5.4:+19602727 | MS.gene35262:CDS |
| TATAAGGCTGTTCAAAAGCC+AGG | 0.481451 | 5.4:+19601276 | MS.gene35262:CDS |
| TTCTCTGCTTTAAGAGAGGA+AGG | 0.482228 | 5.4:-19603363 | None:intergenic |
| TCCTGCCACTTACTTGGAAA+AGG | 0.482416 | 5.4:+19600439 | MS.gene35262:CDS |
| CACTGCATTCTTTAGGCTGA+GGG | 0.482599 | 5.4:+19603165 | MS.gene35262:intron |
| TGCAGACTGCCCAAATGTTA+GGG | 0.484313 | 5.4:-19604089 | None:intergenic |
| AGAAGATTCGCATGCACTGT+TGG | 0.484598 | 5.4:-19603217 | None:intergenic |
| TGGAGGATCATTATTTGTAC+AGG | 0.487458 | 5.4:+19600931 | MS.gene35262:CDS |
| AGTTCTTCATGGGGCAGTAA+AGG | 0.488348 | 5.4:-19601555 | None:intergenic |
| GCACGAAGATATTGCAGTGC+TGG | 0.492162 | 5.4:+19600410 | MS.gene35262:CDS |
| AACATTTGGGCAGTCTGCAC+GGG | 0.492932 | 5.4:+19604093 | MS.gene35262:CDS |
| TCCTGTGTATTCTCCAACAA+AGG | 0.493715 | 5.4:+19599247 | MS.gene35262:CDS |
| TTTCAGAGAGCTGAAGCAAA+TGG | 0.495918 | 5.4:+19602820 | MS.gene35262:CDS |
| TGCAGCAAAGATGTTTGAGC+AGG | 0.497284 | 5.4:+19602720 | MS.gene35262:CDS |
| CTCGAAGAACAGATTTGCAA+GGG | 0.497948 | 5.4:+19603702 | MS.gene35262:CDS |
| TAACATTTGGGCAGTCTGCA+CGG | 0.498668 | 5.4:+19604092 | MS.gene35262:CDS |
| GAACAGCAAATGGAATTTGA+AGG | 0.498848 | 5.4:+19600562 | MS.gene35262:CDS |
| ACGCAGCTTTGGAATTTGAA+AGG | 0.502422 | 5.4:+19601124 | MS.gene35262:CDS |
| TTGAGAGGTTCACCTTCTTG+TGG | 0.502769 | 5.4:+19599128 | MS.gene35262:CDS |
| TTCATTAAAACAACCCCAGC+AGG | 0.503191 | 5.4:-19600164 | None:intergenic |
| GTAACCAACTAGCACAATGC+TGG | 0.505912 | 5.4:-19601698 | None:intergenic |
| TTTGCAAAGAAGTTCTTCAT+GGG | 0.510875 | 5.4:-19601565 | None:intergenic |
| GAATATGCATGTGATGTTGA+TGG | 0.516379 | 5.4:+19600503 | MS.gene35262:CDS |
| ATCAGTAGGAGAAGTTGAAA+AGG | 0.523872 | 5.4:-19600531 | None:intergenic |
| GATGCTTATTCATTCAAGCT+TGG | 0.528112 | 5.4:+19601593 | MS.gene35262:CDS |
| CAGCATTCCAATGTATAGCA+TGG | 0.528642 | 5.4:-19600886 | None:intergenic |
| TTCCCTAGAGCGTACCATGC+AGG | 0.529080 | 5.4:+19601315 | MS.gene35262:CDS |
| CAAAGTTGATTTGGGTAACC+GGG | 0.532287 | 5.4:-19600750 | None:intergenic |
| TGCTGTTTAGTATGTTTGCA+TGG | 0.532827 | 5.4:+19600904 | MS.gene35262:CDS |
| AGCCTGCATGGTACGCTCTA+GGG | 0.534040 | 5.4:-19601317 | None:intergenic |
| AGGTAGAGTAAGACAATCTG+AGG | 0.536728 | 5.4:+19598992 | MS.gene35262:CDS |
| TGATTCTGTGTACCACACTC+TGG | 0.536807 | 5.4:-19602919 | None:intergenic |
| CTGGTTGTAAACTTGAATCC+AGG | 0.537765 | 5.4:-19600194 | None:intergenic |
| AAAACTTGGTATGGTATCCC+TGG | 0.538981 | 5.4:+19601099 | MS.gene35262:CDS |
| CCTCGAAGAACAGATTTGCA+AGG | 0.541170 | 5.4:+19603701 | MS.gene35262:CDS |
| CTTCTCCTACTGATCAGCTT+GGG | 0.543251 | 5.4:+19600540 | MS.gene35262:CDS |
| ACCTGACATCAAGCCCATAG+TGG | 0.543321 | 5.4:+19603293 | MS.gene35262:CDS |
| GAGCTTTCATGATACAAAGC+AGG | 0.543891 | 5.4:-19603246 | None:intergenic |
| TGCTTTGTATCATGAAAGCT+CGG | 0.546043 | 5.4:+19603248 | MS.gene35262:CDS |
| AGCTTTGGAATTTGAAAGGG+TGG | 0.546161 | 5.4:+19601128 | MS.gene35262:CDS |
| ACTTGTCTGAGTGGCAGCAA+TGG | 0.548160 | 5.4:-19599069 | None:intergenic |
| ACTTCTCCTACTGATCAGCT+TGG | 0.549870 | 5.4:+19600539 | MS.gene35262:CDS |
| AACCATGACTGAAGCCTGCA+TGG | 0.553458 | 5.4:-19601329 | None:intergenic |
| TGGTGATTGGTTTCCTCTCG+GGG | 0.555189 | 5.4:+19601494 | MS.gene35262:CDS |
| TTACCATGGCGTAAGCATAC+AGG | 0.555597 | 5.4:-19601837 | None:intergenic |
| AGTGTTTCTTCTCATTCGCA+TGG | 0.557562 | 5.4:+19601744 | MS.gene35262:CDS |
| AAGGCGGAGAGGCTGCACTC+TGG | 0.558918 | 5.4:-19600213 | None:intergenic |
| TCACTGTCATTATCCACTAT+GGG | 0.560366 | 5.4:-19603306 | None:intergenic |
| TCTTGTGGCACGAGATTGCA+TGG | 0.561186 | 5.4:+19599143 | MS.gene35262:CDS |
| TGCAATCTCGTGCCACAAGA+AGG | 0.561867 | 5.4:-19599140 | None:intergenic |
| AGATGTTTGAGCAGGAAGAT+GGG | 0.562717 | 5.4:+19602728 | MS.gene35262:CDS |
| AAATCTCTTGACCTCATCTG+TGG | 0.564286 | 5.4:+19602649 | MS.gene35262:CDS |
| GAGCCTTTGACGTTCTCTTG+GGG | 0.569053 | 5.4:+19601202 | MS.gene35262:CDS |
| CTGTTCCCAAGCTGATCAGT+AGG | 0.569260 | 5.4:-19600545 | None:intergenic |
| TGGTCCATCAAAATATTAGG+TGG | 0.570687 | 5.4:-19601240 | None:intergenic |
| TACCATGCAGGCTTCAGTCA+TGG | 0.571674 | 5.4:+19601327 | MS.gene35262:CDS |
| ATAAGGCTGTTCAAAAGCCA+GGG | 0.571901 | 5.4:+19601277 | MS.gene35262:CDS |
| AATCTGAGGAGGTTAGAAAT+GGG | 0.573649 | 5.4:+19599006 | MS.gene35262:CDS |
| CTCTCGGGGCTATTGCAAGT+AGG | 0.575441 | 5.4:+19601508 | MS.gene35262:CDS |
| AAGGTTATTACAAACTCCCC+TGG | 0.576603 | 5.4:-19601294 | None:intergenic |
| ATGAGATAACAAGTCTGAAG+AGG | 0.577900 | 5.4:-19601637 | None:intergenic |
| TTTCCCCAAGAGAACGTCAA+AGG | 0.580508 | 5.4:-19601205 | None:intergenic |
| ACAGAACCCATGCTATACAT+TGG | 0.582151 | 5.4:+19600879 | MS.gene35262:CDS |
| TTGGTTACTAATGAAATCAA+GGG | 0.584367 | 5.4:+19601713 | MS.gene35262:CDS |
| AGCAGAGAAAAGAAATCTGA+AGG | 0.584819 | 5.4:+19603377 | MS.gene35262:CDS |
| TTCTGAAAGAGAACAAAGAG+TGG | 0.588446 | 5.4:-19603010 | None:intergenic |
| TTTGGCAGGAAATTGGTCGT+GGG | 0.589186 | 5.4:+19600465 | MS.gene35262:CDS |
| TAGTATGTTTGCATGGCATG+TGG | 0.590708 | 5.4:+19600911 | MS.gene35262:CDS |
| AGCATTCCAATGTATAGCAT+GGG | 0.591957 | 5.4:-19600885 | None:intergenic |
| ATATGAGAAAATGGCAAACA+AGG | 0.593266 | 5.4:+19600382 | MS.gene35262:CDS |
| TGAGATAACAAGTCTGAAGA+GGG | 0.601071 | 5.4:-19601636 | None:intergenic |
| AGCTTTCATGATACAAAGCA+GGG | 0.602726 | 5.4:-19603245 | None:intergenic |
| GAGTGCTTCTGTACCTGCTG+GGG | 0.605225 | 5.4:+19600151 | MS.gene35262:CDS |
| GAGGGGAATTGTGAAGAACT+TGG | 0.605479 | 5.4:+19603183 | MS.gene35262:CDS |
| TTGAAGAAAGTCCTTCCTGA+AGG | 0.607024 | 5.4:+19603589 | MS.gene35262:CDS |
| ATCTTCTGCAAATAAACCAA+AGG | 0.609064 | 5.4:-19599284 | None:intergenic |
| TCCTTTGTTGGAGAATACAC+AGG | 0.609723 | 5.4:-19599248 | None:intergenic |
| CTCTGAAACATATCTGACAA+AGG | 0.609736 | 5.4:-19602805 | None:intergenic |
| AATCATGCAAAACATTGCCC+CGG | 0.611248 | 5.4:-19598764 | None:intergenic |
| AAAATTCTAGGTTTCAACTG+TGG | 0.612221 | 5.4:+19601450 | MS.gene35262:intron |
| ATTCCAAAGCTGCGTGACCA+GGG | 0.613347 | 5.4:-19601116 | None:intergenic |
| CATAACAGTCACGTTTGCAA+AGG | 0.613703 | 5.4:-19601782 | None:intergenic |
| ATTTGGGCAGTCTGCACGGG+TGG | 0.619415 | 5.4:+19604096 | MS.gene35262:CDS |
| AGTGGAGGAGATGCTTTGAG+AGG | 0.620104 | 5.4:+19599113 | MS.gene35262:CDS |
| AATCTCTTGACCTCATCTGT+GGG | 0.626666 | 5.4:+19602650 | MS.gene35262:CDS |
| GCAGGTACAGAAGCACTCAA+AGG | 0.631676 | 5.4:-19600146 | None:intergenic |
| TGTGTTTGCTCCCACAGATG+AGG | 0.633446 | 5.4:-19602660 | None:intergenic |
| ACACACTCTTTATCTGAGAG+AGG | 0.633663 | 5.4:+19602678 | MS.gene35262:CDS |
| TGTGTATTCTCCAACAAAGG+AGG | 0.634871 | 5.4:+19599250 | MS.gene35262:CDS |
| CTTCAGTATCCCATTCAGCA+AGG | 0.636604 | 5.4:-19600232 | None:intergenic |
| GTTAGCAGCACTTGTCTGAG+TGG | 0.638870 | 5.4:-19599078 | None:intergenic |
| TCCCATTCAGCAAGGCGGAG+AGG | 0.639564 | 5.4:-19600224 | None:intergenic |
| TTTGAACAGCCTTATAGACA+GGG | 0.640431 | 5.4:-19601269 | None:intergenic |
| AACGTGATGAATAGAAGTGG+AGG | 0.643226 | 5.4:+19599098 | MS.gene35262:CDS |
| TCTCTGCTTTAAGAGAGGAA+GGG | 0.650459 | 5.4:-19603362 | None:intergenic |
| TATGTTTGCATGGCATGTGG+AGG | 0.652368 | 5.4:+19600914 | MS.gene35262:CDS |
| GAGATATGCACTTCTTAACA+GGG | 0.652384 | 5.4:+19601530 | MS.gene35262:CDS |
| GGAGCAGAGGAACAGTCATG+AGG | 0.652702 | 5.4:-19603033 | None:intergenic |
| CATCCTGTATGCTTACGCCA+TGG | 0.654178 | 5.4:+19601834 | MS.gene35262:CDS |
| TCGAAGAACAGATTTGCAAG+GGG | 0.659146 | 5.4:+19603703 | MS.gene35262:CDS |
| TGCATGGTACGCTCTAGGGA+AGG | 0.661692 | 5.4:-19601313 | None:intergenic |
| TTGCAAAGAAGTTCTTCATG+GGG | 0.664478 | 5.4:-19601564 | None:intergenic |
| CCAACAAATAATCCAGAGTG+TGG | 0.665047 | 5.4:+19602907 | MS.gene35262:CDS |
| TAGAGTAAGACAATCTGAGG+AGG | 0.665323 | 5.4:+19598995 | MS.gene35262:CDS |
| TATCAACTTTATGATTAACA+GGG | 0.667769 | 5.4:-19603669 | None:intergenic |
| GCTAACGTGATGAATAGAAG+TGG | 0.674460 | 5.4:+19599095 | MS.gene35262:CDS |
| ACTGCATTCTTTAGGCTGAG+GGG | 0.698405 | 5.4:+19603166 | MS.gene35262:intron |
| AACATCTTACAGGTAGAAGG+AGG | 0.700370 | 5.4:+19598972 | MS.gene35262:intron |
| CAGTATCCCATTCAGCAAGG+CGG | 0.708241 | 5.4:-19600229 | None:intergenic |
| TAAGGCTGTTCAAAAGCCAG+GGG | 0.708748 | 5.4:+19601278 | MS.gene35262:CDS |
| GCTTTCATGATACAAAGCAG+GGG | 0.718139 | 5.4:-19603244 | None:intergenic |
| CTACTTGCAATAGCCCCGAG+AGG | 0.722397 | 5.4:-19601507 | None:intergenic |
| AGCATTAACTATCAGCACTG+CGG | 0.747153 | 5.4:+19601069 | MS.gene35262:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTGATATTATTTTTTATA+TGG | + | chr5.4:19601039-19601058 | MS.gene35262:intron | 10.0% |
| !!! | GAATATAATATTATTTTGTT+TGG | + | chr5.4:19601926-19601945 | MS.gene35262:intron | 10.0% |
| !!! | TATTATTTTTTATATGGTAA+TGG | + | chr5.4:19601045-19601064 | MS.gene35262:intron | 10.0% |
| !! | AAAATAATCATGGATATTAT+TGG | + | chr5.4:19601962-19601981 | MS.gene35262:intron | 15.0% |
| !! | AAATTCAAATGAAAAAAGTT+CGG | - | chr5.4:19600092-19600111 | None:intergenic | 15.0% |
| !! | AAGTTGTTATAAAATAATCA+TGG | + | chr5.4:19601952-19601971 | MS.gene35262:intron | 15.0% |
| !! | AATATGATAAATAAATAACG+GGG | - | chr5.4:19600635-19600654 | None:intergenic | 15.0% |
| !! | CAATATGATAAATAAATAAC+GGG | - | chr5.4:19600636-19600655 | None:intergenic | 15.0% |
| !! | CCAATATGATAAATAAATAA+CGG | - | chr5.4:19600637-19600656 | None:intergenic | 15.0% |
| !!! | CAAAAATTATTAGTTTTCAT+AGG | - | chr5.4:19602295-19602314 | None:intergenic | 15.0% |
| !!! | GATATATTAATTTGTGATAA+TGG | + | chr5.4:19602172-19602191 | MS.gene35262:intron | 15.0% |
| !!! | TTAATATCTTGTTTGAATAT+TGG | + | chr5.4:19603085-19603104 | MS.gene35262:intron | 15.0% |
| !! | AAATGACAACTAAAAATGAA+TGG | - | chr5.4:19602248-19602267 | None:intergenic | 20.0% |
| !! | ATATCAACTTTATGATTAAC+AGG | - | chr5.4:19603673-19603692 | None:intergenic | 20.0% |
| !! | ATGAGATAAAAATAATGTCA+AGG | - | chr5.4:19602357-19602376 | None:intergenic | 20.0% |
| !! | ATGTAAATTCATATCCTAAT+TGG | - | chr5.4:19604053-19604072 | None:intergenic | 20.0% |
| !! | ATTAAATATGCAACTTAAGA+AGG | - | chr5.4:19601017-19601036 | None:intergenic | 20.0% |
| !! | ATTCGATAAGTTTATTAACA+TGG | - | chr5.4:19600702-19600721 | None:intergenic | 20.0% |
| !! | CCGTTATTTATTTATCATAT+TGG | + | chr5.4:19600634-19600653 | MS.gene35262:intron | 20.0% |
| !! | TATCAACTTTATGATTAACA+GGG | - | chr5.4:19603672-19603691 | None:intergenic | 20.0% |
| !! | TGAGATAAAAATAATGTCAA+GGG | - | chr5.4:19602356-19602375 | None:intergenic | 20.0% |
| !!! | AAAATTATTTTTGGAAGCTT+GGG | + | chr5.4:19601904-19601923 | MS.gene35262:intron | 20.0% |
| !!! | AAAGCATTTTAACAAAATGA+CGG | + | chr5.4:19600659-19600678 | MS.gene35262:intron | 20.0% |
| !!! | AAGGATATGAATACATATTT+TGG | - | chr5.4:19602789-19602808 | None:intergenic | 20.0% |
| !!! | AATGCATGCAAAATTATTTT+TGG | + | chr5.4:19601895-19601914 | MS.gene35262:intron | 20.0% |
| !!! | AATTTTGATCTATATGAACA+GGG | + | chr5.4:19603556-19603575 | MS.gene35262:intron | 20.0% |
| !!! | ATAATGGATAATGATGAATA+TGG | - | chr5.4:19599494-19599513 | None:intergenic | 20.0% |
| !!! | ATTATCTAAATTTTAGACCA+TGG | + | chr5.4:19602517-19602536 | MS.gene35262:intron | 20.0% |
| !!! | ATTATTAGTTTTCATAGGTA+TGG | - | chr5.4:19602290-19602309 | None:intergenic | 20.0% |
| !!! | ATTCAAAACACTTACATTTT+TGG | - | chr5.4:19603058-19603077 | None:intergenic | 20.0% |
| !!! | CATTTTTAGTTGTCATTTTA+AGG | + | chr5.4:19602250-19602269 | MS.gene35262:intron | 20.0% |
| !!! | TAATGGATAATGATGAATAT+GGG | - | chr5.4:19599493-19599512 | None:intergenic | 20.0% |
| !!! | TAATTTTGATCTATATGAAC+AGG | + | chr5.4:19603555-19603574 | MS.gene35262:intron | 20.0% |
| !!! | TCTGAATAAACTTGTTTATT+TGG | + | chr5.4:19599621-19599640 | MS.gene35262:intron | 20.0% |
| !!! | TGTTTTGAGTTTTTTCAAAT+AGG | - | chr5.4:19599947-19599966 | None:intergenic | 20.0% |
| !!! | TTATCTAAATTTTAGACCAT+GGG | + | chr5.4:19602518-19602537 | MS.gene35262:intron | 20.0% |
| !!! | TTATTAGTTTTCATAGGTAT+GGG | - | chr5.4:19602289-19602308 | None:intergenic | 20.0% |
| !!! | TTCAAAACACTTACATTTTT+GGG | - | chr5.4:19603057-19603076 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTGATAAATTCC+AGG | + | chr5.4:19600104-19600123 | MS.gene35262:intron | 20.0% |
| !!! | TTTTTATATCTTGCTGAAAT+GGG | - | chr5.4:19603739-19603758 | None:intergenic | 20.0% |
| ! | AACAAGTAAAAAGGAAGAAA+GGG | + | chr5.4:19602479-19602498 | MS.gene35262:intron | 25.0% |
| ! | AATCATTACATCAGCAAATA+AGG | - | chr5.4:19599819-19599838 | None:intergenic | 25.0% |
| ! | ACAATTTGTATATAGGAAAC+CGG | - | chr5.4:19599861-19599880 | None:intergenic | 25.0% |
| ! | ATATTTATCACTTGATTCAC+TGG | - | chr5.4:19603647-19603666 | None:intergenic | 25.0% |
| ! | ATGCATTTAATGTGTAGTAT+CGG | - | chr5.4:19601401-19601420 | None:intergenic | 25.0% |
| ! | ATTATCCATTATCCTTTGTT+TGG | + | chr5.4:19599502-19599521 | MS.gene35262:intron | 25.0% |
| ! | ATTCTGATTCAGGAATATTT+AGG | + | chr5.4:19603331-19603350 | MS.gene35262:CDS | 25.0% |
| ! | CACAACTACAATTTGTATAT+AGG | - | chr5.4:19599868-19599887 | None:intergenic | 25.0% |
| ! | CATTGAAAAACTATGTTAGA+AGG | - | chr5.4:19602047-19602066 | None:intergenic | 25.0% |
| ! | CGTATCTTCAATAAAATTCT+AGG | + | chr5.4:19601438-19601457 | MS.gene35262:intron | 25.0% |
| ! | TAAGATAACGACAAAGTAAT+TGG | - | chr5.4:19602213-19602232 | None:intergenic | 25.0% |
| ! | TACAAAAGCAACAAGTAAAA+AGG | + | chr5.4:19602470-19602489 | MS.gene35262:intron | 25.0% |
| ! | TATAAAAGAGACACTAGTAA+AGG | - | chr5.4:19600593-19600612 | None:intergenic | 25.0% |
| ! | TATTATTTCAGAAACTTTCC+CGG | + | chr5.4:19600732-19600751 | MS.gene35262:intron | 25.0% |
| ! | TGAATTTACATTCTTTGTGT+AGG | + | chr5.4:19604062-19604081 | MS.gene35262:intron | 25.0% |
| ! | TTATGGTCCATCAAAATATT+AGG | - | chr5.4:19601246-19601265 | None:intergenic | 25.0% |
| ! | TTATGTAAGATAGAGAATGT+TGG | - | chr5.4:19603525-19603544 | None:intergenic | 25.0% |
| ! | TTCTGATTCAGGAATATTTA+GGG | + | chr5.4:19603332-19603351 | MS.gene35262:CDS | 25.0% |
| ! | TTGGTTACTAATGAAATCAA+GGG | + | chr5.4:19601713-19601732 | MS.gene35262:CDS | 25.0% |
| !! | AAAATCCAAATGATTGATTC+AGG | + | chr5.4:19604007-19604026 | MS.gene35262:intron | 25.0% |
| !! | ACTCTCCAAATATTTTCAAA+AGG | - | chr5.4:19603939-19603958 | None:intergenic | 25.0% |
| !! | ATACTTTTACCACTTCAATA+TGG | + | chr5.4:19599425-19599444 | MS.gene35262:intron | 25.0% |
| !! | ATTCTTTTTGTGTCTTACAT+TGG | + | chr5.4:19600838-19600857 | MS.gene35262:intron | 25.0% |
| !! | ATTGAATTTTATACAACTCC+AGG | + | chr5.4:19602880-19602899 | MS.gene35262:CDS | 25.0% |
| !! | ATTTGCTGATGTAATGATTA+TGG | + | chr5.4:19599820-19599839 | MS.gene35262:intron | 25.0% |
| !! | CTTTTTATATCTTGCTGAAA+TGG | - | chr5.4:19603740-19603759 | None:intergenic | 25.0% |
| !! | TTCTTTTTGTGTCTTACATT+GGG | + | chr5.4:19600839-19600858 | MS.gene35262:intron | 25.0% |
| !! | TTTGAAACTGAAAAGCAAAT+AGG | + | chr5.4:19602434-19602453 | MS.gene35262:intron | 25.0% |
| !!! | ACACAGAATCAATTTGTTTT+GGG | + | chr5.4:19602931-19602950 | MS.gene35262:CDS | 25.0% |
| !!! | AGTTGCCTTTTGAAAATATT+TGG | + | chr5.4:19603931-19603950 | MS.gene35262:intron | 25.0% |
| !!! | ATACATATTTTGGTCACTTT+TGG | - | chr5.4:19602779-19602798 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGTCAATAATACC+CGG | - | chr5.4:19602395-19602414 | None:intergenic | 25.0% |
| !!! | ATTTCCACCTAATATTTTGA+TGG | + | chr5.4:19601236-19601255 | MS.gene35262:CDS | 25.0% |
| !!! | CAAAATTATTTTTGGAAGCT+TGG | + | chr5.4:19601903-19601922 | MS.gene35262:intron | 25.0% |
| !!! | CTAACTTCATTTTAGCTAAT+GGG | + | chr5.4:19603968-19603987 | MS.gene35262:intron | 25.0% |
| !!! | TACACAGAATCAATTTGTTT+TGG | + | chr5.4:19602930-19602949 | MS.gene35262:CDS | 25.0% |
| !!! | TAGAATTTTTGAAGCGTAAA+AGG | + | chr5.4:19599030-19599049 | MS.gene35262:CDS | 25.0% |
| !!! | TATTAGTTTTCATAGGTATG+GGG | - | chr5.4:19602288-19602307 | None:intergenic | 25.0% |
| !!! | TTCTGGAATTCTAAATCATA+TGG | + | chr5.4:19601986-19602005 | MS.gene35262:intron | 25.0% |
| AAAATTCTAGGTTTCAACTG+TGG | + | chr5.4:19601450-19601469 | MS.gene35262:intron | 30.0% | |
| AAATAAGGAACTTCTTGGAA+AGG | - | chr5.4:19599804-19599823 | None:intergenic | 30.0% | |
| AACTCAATAGACTTACTAAC+AGG | + | chr5.4:19599979-19599998 | MS.gene35262:intron | 30.0% | |
| AATAATGTCAAGGGTCTTAA+AGG | - | chr5.4:19602347-19602366 | None:intergenic | 30.0% | |
| AATAGACTTACTAACAGGTA+TGG | + | chr5.4:19599984-19600003 | MS.gene35262:intron | 30.0% | |
| AATTTACCATGTCCTCTTTA+CGG | + | chr5.4:19600028-19600047 | MS.gene35262:intron | 30.0% | |
| ACATACCAAAACTAACATAC+TGG | - | chr5.4:19602151-19602170 | None:intergenic | 30.0% | |
| ATACCATATTTAGAAGCTTC+TGG | - | chr5.4:19599314-19599333 | None:intergenic | 30.0% | |
| ATATAAAAAGTCAGGCAATG+AGG | + | chr5.4:19603750-19603769 | MS.gene35262:CDS | 30.0% | |
| ATATGAGAAAATGGCAAACA+AGG | + | chr5.4:19600382-19600401 | MS.gene35262:CDS | 30.0% | |
| ATCTTCTGCAAATAAACCAA+AGG | - | chr5.4:19599287-19599306 | None:intergenic | 30.0% | |
| ATGGAAACTAATCCAAACAA+AGG | - | chr5.4:19599517-19599536 | None:intergenic | 30.0% | |
| ATTCCGTGAATATGAGAAAA+TGG | + | chr5.4:19600373-19600392 | MS.gene35262:CDS | 30.0% | |
| CAACAAGTAAAAAGGAAGAA+AGG | + | chr5.4:19602478-19602497 | MS.gene35262:intron | 30.0% | |
| CATACCAAAACTAACATACT+GGG | - | chr5.4:19602150-19602169 | None:intergenic | 30.0% | |
| CGCAAGAATTTCAATGTTTA+TGG | + | chr5.4:19599582-19599601 | MS.gene35262:intron | 30.0% | |
| CTAATCCAAACAAAGGATAA+TGG | - | chr5.4:19599510-19599529 | None:intergenic | 30.0% | |
| GAAAAGAAATCTGAAGGTTA+TGG | + | chr5.4:19603383-19603402 | MS.gene35262:CDS | 30.0% | |
| GAAATAATCTTGCATATACC+TGG | - | chr5.4:19600125-19600144 | None:intergenic | 30.0% | |
| GACATAAGAAATTGTCATAC+CGG | - | chr5.4:19600797-19600816 | None:intergenic | 30.0% | |
| GTAAGATGTTTCACATTTCA+CGG | - | chr5.4:19598962-19598981 | None:intergenic | 30.0% | |
| GTAATGATTATGGTCTTTGA+TGG | + | chr5.4:19599830-19599849 | MS.gene35262:intron | 30.0% | |
| GTTGGTTACTAATGAAATCA+AGG | + | chr5.4:19601712-19601731 | MS.gene35262:CDS | 30.0% | |
| GTTTCACGATAGAAAATGAA+TGG | - | chr5.4:19599920-19599939 | None:intergenic | 30.0% | |
| TAAGTTTGATACAAGCGATT+TGG | + | chr5.4:19599199-19599218 | MS.gene35262:CDS | 30.0% | |
| TAATTGAAGCTACTATACGA+TGG | - | chr5.4:19599536-19599555 | None:intergenic | 30.0% | |
| TAGTTAATTAGTAAACCCTG+TGG | + | chr5.4:19599371-19599390 | MS.gene35262:intron | 30.0% | |
| TCAAGTTTAAGCTCACAATA+AGG | - | chr5.4:19602853-19602872 | None:intergenic | 30.0% | |
| TCAGCAAGATATAAAAAGTC+AGG | + | chr5.4:19603742-19603761 | MS.gene35262:CDS | 30.0% | |
| TGAAATGTGAAACATCTTAC+AGG | + | chr5.4:19598962-19598981 | MS.gene35262:intron | 30.0% | |
| TGCATTTAATGTGTAGTATC+GGG | - | chr5.4:19601400-19601419 | None:intergenic | 30.0% | |
| TTATCTGAGAGAGGATATTA+CGG | + | chr5.4:19602687-19602706 | MS.gene35262:CDS | 30.0% | |
| TTTGCAAAGAAGTTCTTCAT+GGG | - | chr5.4:19601568-19601587 | None:intergenic | 30.0% | |
| TTTGTCACAAATTTATCCCA+TGG | - | chr5.4:19602537-19602556 | None:intergenic | 30.0% | |
| ! | AAAGTCACATTTTTCATGAG+TGG | + | chr5.4:19600257-19600276 | MS.gene35262:CDS | 30.0% |
| ! | AAGTGGTAAAAGTATGAGAA+TGG | - | chr5.4:19599420-19599439 | None:intergenic | 30.0% |
| ! | AATAGACGCAAAGTTGATTT+GGG | - | chr5.4:19600761-19600780 | None:intergenic | 30.0% |
| ! | ACATGCAAGGATAATTTTGA+AGG | - | chr5.4:19598921-19598940 | None:intergenic | 30.0% |
| ! | ACTGATATTTTGTCAAGTGA+TGG | + | chr5.4:19601171-19601190 | MS.gene35262:CDS | 30.0% |
| ! | TGTTTCAGTTTGTTCATTGT+TGG | + | chr5.4:19598831-19598850 | MS.gene35262:intron | 30.0% |
| ! | TTCATTTTCCAAAGAATCAC+CGG | + | chr5.4:19598745-19598764 | MS.gene35262:CDS | 30.0% |
| !! | TCATGGATATTATTGGTTTC+TGG | + | chr5.4:19601969-19601988 | MS.gene35262:intron | 30.0% |
| !!! | ATTAGTTTTCATAGGTATGG+GGG | - | chr5.4:19602287-19602306 | None:intergenic | 30.0% |
| !!! | CACAGAATCAATTTGTTTTG+GGG | + | chr5.4:19602932-19602951 | MS.gene35262:CDS | 30.0% |
| !!! | GCTAACTTCATTTTAGCTAA+TGG | + | chr5.4:19603967-19603986 | MS.gene35262:intron | 30.0% |
| !!! | TTGCCATTTTCTCATATTCA+CGG | - | chr5.4:19600379-19600398 | None:intergenic | 30.0% |
| AATATGGTATGTATCCGTGT+TGG | + | chr5.4:19599324-19599343 | MS.gene35262:intron | 35.0% | |
| AATCTGAGGAGGTTAGAAAT+GGG | + | chr5.4:19599006-19599025 | MS.gene35262:CDS | 35.0% | |
| AGCAGAGAAAAGAAATCTGA+AGG | + | chr5.4:19603377-19603396 | MS.gene35262:CDS | 35.0% | |
| AGCATTCCAATGTATAGCAT+GGG | - | chr5.4:19600888-19600907 | None:intergenic | 35.0% | |
| AGCTTTCATGATACAAAGCA+GGG | - | chr5.4:19603248-19603267 | None:intergenic | 35.0% | |
| ATCACTGTCATTATCCACTA+TGG | - | chr5.4:19603310-19603329 | None:intergenic | 35.0% | |
| ATCAGTAGGAGAAGTTGAAA+AGG | - | chr5.4:19600534-19600553 | None:intergenic | 35.0% | |
| ATGAGATAACAAGTCTGAAG+AGG | - | chr5.4:19601640-19601659 | None:intergenic | 35.0% | |
| ATGCATTGAAACACACTCTT+AGG | - | chr5.4:19601882-19601901 | None:intergenic | 35.0% | |
| CAAATCAACTTTGCGTCTAT+TGG | + | chr5.4:19600760-19600779 | MS.gene35262:CDS | 35.0% | |
| CAACTAACACTGCATTCTTT+AGG | + | chr5.4:19603158-19603177 | MS.gene35262:intron | 35.0% | |
| CCTAATTGGTTAATACCTTG+CGG | - | chr5.4:19604039-19604058 | None:intergenic | 35.0% | |
| CTAAACACAAACAGAATCTC+TGG | - | chr5.4:19603483-19603502 | None:intergenic | 35.0% | |
| CTTTGCAAAGAAGTTCTTCA+TGG | - | chr5.4:19601569-19601588 | None:intergenic | 35.0% | |
| GAACAGCAAATGGAATTTGA+AGG | + | chr5.4:19600562-19600581 | MS.gene35262:CDS | 35.0% | |
| GAATATGCATGTGATGTTGA+TGG | + | chr5.4:19600503-19600522 | MS.gene35262:CDS | 35.0% | |
| GAGATATGCACTTCTTAACA+GGG | + | chr5.4:19601530-19601549 | MS.gene35262:CDS | 35.0% | |
| GATGCTTATTCATTCAAGCT+TGG | + | chr5.4:19601593-19601612 | MS.gene35262:CDS | 35.0% | |
| GCAAAAATAGAGAGCTAATG+TGG | - | chr5.4:19599749-19599768 | None:intergenic | 35.0% | |
| TCACTGTCATTATCCACTAT+GGG | - | chr5.4:19603309-19603328 | None:intergenic | 35.0% | |
| TCAGCAAATAAGGAACTTCT+TGG | - | chr5.4:19599809-19599828 | None:intergenic | 35.0% | |
| TCATAACCTATCTCTTTCTC+CGG | + | chr5.4:19602373-19602392 | MS.gene35262:intron | 35.0% | |
| TCTATTGGAAACGTCAATTC+CGG | + | chr5.4:19600775-19600794 | MS.gene35262:CDS | 35.0% | |
| TCTCTATGCCCAAAAATGAA+GGG | - | chr5.4:19603885-19603904 | None:intergenic | 35.0% | |
| TCTTCAAATTCCTCCTTTGT+TGG | - | chr5.4:19599263-19599282 | None:intergenic | 35.0% | |
| TGAAACATCTTACAGGTAGA+AGG | + | chr5.4:19598969-19598988 | MS.gene35262:intron | 35.0% | |
| TGAGATAACAAGTCTGAAGA+GGG | - | chr5.4:19601639-19601658 | None:intergenic | 35.0% | |
| TGCTTCCTGAATCAATCATT+TGG | - | chr5.4:19604015-19604034 | None:intergenic | 35.0% | |
| TGCTTTGTATCATGAAAGCT+CGG | + | chr5.4:19603248-19603267 | MS.gene35262:CDS | 35.0% | |
| TGGAGGATCATTATTTGTAC+AGG | + | chr5.4:19600931-19600950 | MS.gene35262:CDS | 35.0% | |
| TGGTCCATCAAAATATTAGG+TGG | - | chr5.4:19601243-19601262 | None:intergenic | 35.0% | |
| TGTTAGAAGGAAGTTATAGC+TGG | - | chr5.4:19602034-19602053 | None:intergenic | 35.0% | |
| TGTTTGTGTTTAGCGATTCT+TGG | + | chr5.4:19603490-19603509 | MS.gene35262:intron | 35.0% | |
| TTACATTGGGCTGTATTTCA+GGG | + | chr5.4:19600852-19600871 | MS.gene35262:intron | 35.0% | |
| TTCACATTTCACGGTTAGAT+TGG | - | chr5.4:19598953-19598972 | None:intergenic | 35.0% | |
| TTGCAAAGAAGTTCTTCATG+GGG | - | chr5.4:19601567-19601586 | None:intergenic | 35.0% | |
| TTGGAATATACTCACATGCA+AGG | - | chr5.4:19598934-19598953 | None:intergenic | 35.0% | |
| TTTCGCTTGAAAAACACATC+TGG | - | chr5.4:19599173-19599192 | None:intergenic | 35.0% | |
| ! | AAACTCCTTTTCCAAGTAAG+TGG | - | chr5.4:19600447-19600466 | None:intergenic | 35.0% |
| ! | ACCACTTCAATATGGCTTTT+GGG | + | chr5.4:19599433-19599452 | MS.gene35262:intron | 35.0% |
| ! | CAATAGACGCAAAGTTGATT+TGG | - | chr5.4:19600762-19600781 | None:intergenic | 35.0% |
| ! | CTTACTTGGAAAAGGAGTTT+TGG | + | chr5.4:19600447-19600466 | MS.gene35262:CDS | 35.0% |
| ! | TACCACTTCAATATGGCTTT+TGG | + | chr5.4:19599432-19599451 | MS.gene35262:intron | 35.0% |
| ! | TCACATTTTTCATGAGTGGA+AGG | + | chr5.4:19600261-19600280 | MS.gene35262:CDS | 35.0% |
| ! | TCATTTTCCAAAGAATCACC+GGG | + | chr5.4:19598746-19598765 | MS.gene35262:CDS | 35.0% |
| ! | TCGTAAAGTGTTTCTCAAGA+AGG | + | chr5.4:19599719-19599738 | MS.gene35262:intron | 35.0% |
| ! | TGCTGTTTAGTATGTTTGCA+TGG | + | chr5.4:19600904-19600923 | MS.gene35262:CDS | 35.0% |
| ! | TTGATACAAGCGATTTGGAT+TGG | + | chr5.4:19599204-19599223 | MS.gene35262:CDS | 35.0% |
| ! | TTTGAACAGCCTTATAGACA+GGG | - | chr5.4:19601272-19601291 | None:intergenic | 35.0% |
| !! | CTCTGAAACATATCTGACAA+AGG | - | chr5.4:19602808-19602827 | None:intergenic | 35.0% |
| !! | TGAATTTTGCACTTGGTGAT+TGG | + | chr5.4:19601481-19601500 | MS.gene35262:CDS | 35.0% |
| !! | TTTTGAACAGCCTTATAGAC+AGG | - | chr5.4:19601273-19601292 | None:intergenic | 35.0% |
| !!! | AGATGTGTTTTTCAAGCGAA+AGG | + | chr5.4:19599172-19599191 | MS.gene35262:CDS | 35.0% |
| !!! | TCTTTTCTCTGCTTTAAGAG+AGG | - | chr5.4:19603370-19603389 | None:intergenic | 35.0% |
| AAAACTTGGTATGGTATCCC+TGG | + | chr5.4:19601099-19601118 | MS.gene35262:CDS | 40.0% | |
| AAATCTCTTGACCTCATCTG+TGG | + | chr5.4:19602649-19602668 | MS.gene35262:CDS | 40.0% | |
| AACAGATTTGCAAGGGGAAA+TGG | + | chr5.4:19603709-19603728 | MS.gene35262:CDS | 40.0% | |
| AACATCTTACAGGTAGAAGG+AGG | + | chr5.4:19598972-19598991 | MS.gene35262:intron | 40.0% | |
| AACGACAAAGTAATTGGCCA+CGG | - | chr5.4:19602207-19602226 | None:intergenic | 40.0% | |
| AACGTGATGAATAGAAGTGG+AGG | + | chr5.4:19599098-19599117 | MS.gene35262:CDS | 40.0% | |
| AAGATGTTTGAGCAGGAAGA+TGG | + | chr5.4:19602727-19602746 | MS.gene35262:CDS | 40.0% | |
| AAGGAACTTCTTGGAAAGGT+CGG | - | chr5.4:19599800-19599819 | None:intergenic | 40.0% | |
| AAGGTTATTACAAACTCCCC+TGG | - | chr5.4:19601297-19601316 | None:intergenic | 40.0% | |
| AATCATGCAAAACATTGCCC+CGG | - | chr5.4:19598767-19598786 | None:intergenic | 40.0% | |
| AATCTCTTGACCTCATCTGT+GGG | + | chr5.4:19602650-19602669 | MS.gene35262:CDS | 40.0% | |
| ACACACTCTTTATCTGAGAG+AGG | + | chr5.4:19602678-19602697 | MS.gene35262:CDS | 40.0% | |
| ACAGAACCCATGCTATACAT+TGG | + | chr5.4:19600879-19600898 | MS.gene35262:CDS | 40.0% | |
| ACCAAAACTAACATACTGGG+AGG | - | chr5.4:19602147-19602166 | None:intergenic | 40.0% | |
| ACCCAAAAGCCATATTGAAG+TGG | - | chr5.4:19599437-19599456 | None:intergenic | 40.0% | |
| AGATGTTTGAGCAGGAAGAT+GGG | + | chr5.4:19602728-19602747 | MS.gene35262:CDS | 40.0% | |
| AGCATTAACTATCAGCACTG+CGG | + | chr5.4:19601069-19601088 | MS.gene35262:intron | 40.0% | |
| AGGTAGAGTAAGACAATCTG+AGG | + | chr5.4:19598992-19599011 | MS.gene35262:CDS | 40.0% | |
| AGTGTTTCTTCTCATTCGCA+TGG | + | chr5.4:19601744-19601763 | MS.gene35262:CDS | 40.0% | |
| ATAAGGCTGTTCAAAAGCCA+GGG | + | chr5.4:19601277-19601296 | MS.gene35262:CDS | 40.0% | |
| ATCAGTGCAAACTACCAACA+CGG | - | chr5.4:19599341-19599360 | None:intergenic | 40.0% | |
| CAATCTGAGGAGGTTAGAAA+TGG | + | chr5.4:19599005-19599024 | MS.gene35262:CDS | 40.0% | |
| CAGCATTCCAATGTATAGCA+TGG | - | chr5.4:19600889-19600908 | None:intergenic | 40.0% | |
| CATAACAGTCACGTTTGCAA+AGG | - | chr5.4:19601785-19601804 | None:intergenic | 40.0% | |
| CATAACCTATCTCTTTCTCC+GGG | + | chr5.4:19602374-19602393 | MS.gene35262:intron | 40.0% | |
| CATCTATCCTTTCCGTAAAG+AGG | - | chr5.4:19600043-19600062 | None:intergenic | 40.0% | |
| CCAAAACTAACATACTGGGA+GGG | - | chr5.4:19602146-19602165 | None:intergenic | 40.0% | |
| CCAACAAATAATCCAGAGTG+TGG | + | chr5.4:19602907-19602926 | MS.gene35262:CDS | 40.0% | |
| CCACACTCTGGATTATTTGT+TGG | - | chr5.4:19602910-19602929 | None:intergenic | 40.0% | |
| CCATAAAGTCCCTGTCTATA+AGG | + | chr5.4:19601260-19601279 | MS.gene35262:CDS | 40.0% | |
| CCTTATAGACAGGGACTTTA+TGG | - | chr5.4:19601263-19601282 | None:intergenic | 40.0% | |
| CTCGAAGAACAGATTTGCAA+GGG | + | chr5.4:19603702-19603721 | MS.gene35262:CDS | 40.0% | |
| CTCTCTATGCCCAAAAATGA+AGG | - | chr5.4:19603886-19603905 | None:intergenic | 40.0% | |
| CTGGTTGTAAACTTGAATCC+AGG | - | chr5.4:19600197-19600216 | None:intergenic | 40.0% | |
| CTTACATTGGGCTGTATTTC+AGG | + | chr5.4:19600851-19600870 | MS.gene35262:intron | 40.0% | |
| GACAGTGATGATTCTGATTC+AGG | + | chr5.4:19603321-19603340 | MS.gene35262:CDS | 40.0% | |
| GAGAGAGGATATTACGGATA+TGG | + | chr5.4:19602693-19602712 | MS.gene35262:CDS | 40.0% | |
| GAGCTTTCATGATACAAAGC+AGG | - | chr5.4:19603249-19603268 | None:intergenic | 40.0% | |
| GCTAACGTGATGAATAGAAG+TGG | + | chr5.4:19599095-19599114 | MS.gene35262:CDS | 40.0% | |
| GCTCCAGAAGCTTCTAAATA+TGG | + | chr5.4:19599308-19599327 | MS.gene35262:CDS | 40.0% | |
| GCTTAGTTTCGAAGTAGTTG+TGG | + | chr5.4:19598794-19598813 | MS.gene35262:intron | 40.0% | |
| GCTTTCATGATACAAAGCAG+GGG | - | chr5.4:19603247-19603266 | None:intergenic | 40.0% | |
| GGAGATATGCACTTCTTAAC+AGG | + | chr5.4:19601529-19601548 | MS.gene35262:CDS | 40.0% | |
| GGAGGAATTTGAAGATCCTT+TGG | + | chr5.4:19599268-19599287 | MS.gene35262:CDS | 40.0% | |
| GTGCATATGTTAATGCCACA+GGG | - | chr5.4:19599389-19599408 | None:intergenic | 40.0% | |
| TAATACCCGGAGAAAGAGAT+AGG | - | chr5.4:19602382-19602401 | None:intergenic | 40.0% | |
| TAGAGTAAGACAATCTGAGG+AGG | + | chr5.4:19598995-19599014 | MS.gene35262:CDS | 40.0% | |
| TAGTATGTTTGCATGGCATG+TGG | + | chr5.4:19600911-19600930 | MS.gene35262:CDS | 40.0% | |
| TATAAGGCTGTTCAAAAGCC+AGG | + | chr5.4:19601276-19601295 | MS.gene35262:CDS | 40.0% | |
| TCCTGTGTATTCTCCAACAA+AGG | + | chr5.4:19599247-19599266 | MS.gene35262:CDS | 40.0% | |
| TCCTTTGTTGGAGAATACAC+AGG | - | chr5.4:19599251-19599270 | None:intergenic | 40.0% | |
| TCGAAGAACAGATTTGCAAG+GGG | + | chr5.4:19603703-19603722 | MS.gene35262:CDS | 40.0% | |
| TCTCTGGCAGATATACATGA+TGG | - | chr5.4:19603467-19603486 | None:intergenic | 40.0% | |
| TGTGTATTCTCCAACAAAGG+AGG | + | chr5.4:19599250-19599269 | MS.gene35262:CDS | 40.0% | |
| TTCAAAACATTCTGAGCAGC+AGG | + | chr5.4:19603407-19603426 | MS.gene35262:CDS | 40.0% | |
| TTCATTAAAACAACCCCAGC+AGG | - | chr5.4:19600167-19600186 | None:intergenic | 40.0% | |
| TTGAAGAAAGTCCTTCCTGA+AGG | + | chr5.4:19603589-19603608 | MS.gene35262:CDS | 40.0% | |
| TTTCAGAGAGCTGAAGCAAA+TGG | + | chr5.4:19602820-19602839 | MS.gene35262:CDS | 40.0% | |
| TTTGCTGAAACCTCTCTCTT+CGG | - | chr5.4:19603807-19603826 | None:intergenic | 40.0% | |
| ! | CATTTTCCAAAGAATCACCG+GGG | + | chr5.4:19598747-19598766 | MS.gene35262:CDS | 40.0% |
| ! | CCGCAAGGTATTAACCAATT+AGG | + | chr5.4:19604036-19604055 | MS.gene35262:intron | 40.0% |
| ! | CTGTTTAAAACCTCATGCAG+TGG | - | chr5.4:19603126-19603145 | None:intergenic | 40.0% |
| ! | GAAGCAGTGAATTTTGCACT+TGG | + | chr5.4:19601474-19601493 | MS.gene35262:CDS | 40.0% |
| ! | GGATTATTTGTTGGCAATCC+TGG | - | chr5.4:19602901-19602920 | None:intergenic | 40.0% |
| ! | TTGTCAAGTGATGGAGAAGA+TGG | + | chr5.4:19601180-19601199 | MS.gene35262:CDS | 40.0% |
| !! | AAGGAGTTTTGGCAGGAAAT+TGG | + | chr5.4:19600458-19600477 | MS.gene35262:CDS | 40.0% |
| !! | ACGCAGCTTTGGAATTTGAA+AGG | + | chr5.4:19601124-19601143 | MS.gene35262:CDS | 40.0% |
| !! | ACTTACATTTTTGGGAGCAG+AGG | - | chr5.4:19603049-19603068 | None:intergenic | 40.0% |
| !! | AGCTTTGGAATTTGAAAGGG+TGG | + | chr5.4:19601128-19601147 | MS.gene35262:CDS | 40.0% |
| !! | CAAAGTTGATTTGGGTAACC+GGG | - | chr5.4:19600753-19600772 | None:intergenic | 40.0% |
| !! | CGCAGCTTTGGAATTTGAAA+GGG | + | chr5.4:19601125-19601144 | MS.gene35262:CDS | 40.0% |
| !! | GCAAAGTTGATTTGGGTAAC+CGG | - | chr5.4:19600754-19600773 | None:intergenic | 40.0% |
| !! | GGCTTTTGGGTGTGTTTTTA+GGG | + | chr5.4:19599446-19599465 | MS.gene35262:intron | 40.0% |
| !! | GTTTTAATGAAGGAGCAACC+TGG | + | chr5.4:19600176-19600195 | MS.gene35262:CDS | 40.0% |
| !! | TCTCTGCTTTAAGAGAGGAA+GGG | - | chr5.4:19603365-19603384 | None:intergenic | 40.0% |
| !! | TGGCTTTTGGGTGTGTTTTT+AGG | + | chr5.4:19599445-19599464 | MS.gene35262:intron | 40.0% |
| !! | TTCTCTGCTTTAAGAGAGGA+AGG | - | chr5.4:19603366-19603385 | None:intergenic | 40.0% |
| !!! | TGCTGGGGTTGTTTTAATGA+AGG | + | chr5.4:19600166-19600185 | MS.gene35262:CDS | 40.0% |
| !!! | TGTGTTTTTCAAGCGAAAGG+TGG | + | chr5.4:19599175-19599194 | MS.gene35262:CDS | 40.0% |
| AAGAGTGGATGCAGCAGAAA+AGG | - | chr5.4:19602998-19603017 | None:intergenic | 45.0% | |
| AAGCGCCTTCCATTGAGATT+GGG | + | chr5.4:19603836-19603855 | MS.gene35262:intron | 45.0% | |
| AAGGAAACGTCAGACACTTC+TGG | - | chr5.4:19602979-19602998 | None:intergenic | 45.0% | |
| ACACTGCATTCTTTAGGCTG+AGG | + | chr5.4:19603164-19603183 | MS.gene35262:intron | 45.0% | |
| ACCATGTCCTCTTTACGGAA+AGG | + | chr5.4:19600033-19600052 | MS.gene35262:intron | 45.0% | |
| ACGACAAAGTAATTGGCCAC+GGG | - | chr5.4:19602206-19602225 | None:intergenic | 45.0% | |
| ACTGCATTCTTTAGGCTGAG+GGG | + | chr5.4:19603166-19603185 | MS.gene35262:intron | 45.0% | |
| ACTTCTCCTACTGATCAGCT+TGG | + | chr5.4:19600539-19600558 | MS.gene35262:CDS | 45.0% | |
| AGAAGATTCGCATGCACTGT+TGG | - | chr5.4:19603220-19603239 | None:intergenic | 45.0% | |
| AGTTCTTCATGGGGCAGTAA+AGG | - | chr5.4:19601558-19601577 | None:intergenic | 45.0% | |
| ATCAGCTTGGGAACAGCAAA+TGG | + | chr5.4:19600552-19600571 | MS.gene35262:CDS | 45.0% | |
| CACTGCATTCTTTAGGCTGA+GGG | + | chr5.4:19603165-19603184 | MS.gene35262:intron | 45.0% | |
| CCTCGAAGAACAGATTTGCA+AGG | + | chr5.4:19603701-19603720 | MS.gene35262:CDS | 45.0% | |
| CCTTGCAAATCTGTTCTTCG+AGG | - | chr5.4:19603704-19603723 | None:intergenic | 45.0% | |
| CGTGCATATGTTAATGCCAC+AGG | - | chr5.4:19599390-19599409 | None:intergenic | 45.0% | |
| CTTCAGTATCCCATTCAGCA+AGG | - | chr5.4:19600235-19600254 | None:intergenic | 45.0% | |
| CTTCTCCTACTGATCAGCTT+GGG | + | chr5.4:19600540-19600559 | MS.gene35262:CDS | 45.0% | |
| GAGGGGAATTGTGAAGAACT+TGG | + | chr5.4:19603183-19603202 | MS.gene35262:CDS | 45.0% | |
| GGAAATTGGTCGTGGGAAAA+TGG | + | chr5.4:19600472-19600491 | MS.gene35262:CDS | 45.0% | |
| GGAGAATACACAGGACATTC+TGG | - | chr5.4:19599242-19599261 | None:intergenic | 45.0% | |
| GTAACCAACTAGCACAATGC+TGG | - | chr5.4:19601701-19601720 | None:intergenic | 45.0% | |
| GTAGGCAAGCCCTAACATTT+GGG | + | chr5.4:19604080-19604099 | MS.gene35262:intron | 45.0% | |
| GTTTCCAGCATTGTGCTAGT+TGG | + | chr5.4:19601694-19601713 | MS.gene35262:CDS | 45.0% | |
| TAACATTTGGGCAGTCTGCA+CGG | + | chr5.4:19604092-19604111 | MS.gene35262:CDS | 45.0% | |
| TAAGGCTGTTCAAAAGCCAG+GGG | + | chr5.4:19601278-19601297 | MS.gene35262:CDS | 45.0% | |
| TATGTTTGCATGGCATGTGG+AGG | + | chr5.4:19600914-19600933 | MS.gene35262:CDS | 45.0% | |
| TCCTTTCCGTAAAGAGGACA+TGG | - | chr5.4:19600037-19600056 | None:intergenic | 45.0% | |
| TGAGCAGGAAGATGGGATAT+TGG | + | chr5.4:19602735-19602754 | MS.gene35262:CDS | 45.0% | |
| TGATTCTGTGTACCACACTC+TGG | - | chr5.4:19602922-19602941 | None:intergenic | 45.0% | |
| TGCAGACTGCCCAAATGTTA+GGG | - | chr5.4:19604092-19604111 | None:intergenic | 45.0% | |
| TGCAGCAAAGATGTTTGAGC+AGG | + | chr5.4:19602720-19602739 | MS.gene35262:CDS | 45.0% | |
| TGTAGGCAAGCCCTAACATT+TGG | + | chr5.4:19604079-19604098 | MS.gene35262:intron | 45.0% | |
| TTACCATGGCGTAAGCATAC+AGG | - | chr5.4:19601840-19601859 | None:intergenic | 45.0% | |
| TTCCTGAAGGAAAAAGCAGC+AGG | + | chr5.4:19603602-19603621 | MS.gene35262:CDS | 45.0% | |
| TTGAGAGGTTCACCTTCTTG+TGG | + | chr5.4:19599128-19599147 | MS.gene35262:CDS | 45.0% | |
| TTTCCCCAAGAGAACGTCAA+AGG | - | chr5.4:19601208-19601227 | None:intergenic | 45.0% | |
| TTTGGCAGGAAATTGGTCGT+GGG | + | chr5.4:19600465-19600484 | MS.gene35262:CDS | 45.0% | |
| TTTGGCCCAATCTCAATGGA+AGG | - | chr5.4:19603844-19603863 | None:intergenic | 45.0% | |
| ! | ATGTCTTCCTGCCACTTACT+TGG | + | chr5.4:19600433-19600452 | MS.gene35262:CDS | 45.0% |
| ! | GCTTTGCGTTGATATCGGTT+TGG | + | chr5.4:19598722-19598741 | MS.gene35262:CDS | 45.0% |
| ! | GGAGCGTCAAAAACTTGGTA+TGG | + | chr5.4:19601090-19601109 | MS.gene35262:CDS | 45.0% |
| ! | TCCTGCCACTTACTTGGAAA+AGG | + | chr5.4:19600439-19600458 | MS.gene35262:CDS | 45.0% |
| ! | TCCTTTTCCAAGTAAGTGGC+AGG | - | chr5.4:19600443-19600462 | None:intergenic | 45.0% |
| ! | TTTTGGCAGGAAATTGGTCG+TGG | + | chr5.4:19600464-19600483 | MS.gene35262:CDS | 45.0% |
| !! | ACGTCAGACACTTCTGGTTT+AGG | - | chr5.4:19602973-19602992 | None:intergenic | 45.0% |
| !! | ATGGTCTTTGATGGCGTTTC+CGG | + | chr5.4:19599839-19599858 | MS.gene35262:intron | 45.0% |
| !! | CCCTCCCAGTATGTTAGTTT+TGG | + | chr5.4:19602143-19602162 | MS.gene35262:intron | 45.0% |
| !! | CTTGGAAAAGGAGTTTTGGC+AGG | + | chr5.4:19600451-19600470 | MS.gene35262:CDS | 45.0% |
| !! | CTTGGTGATTGGTTTCCTCT+CGG | + | chr5.4:19601492-19601511 | MS.gene35262:CDS | 45.0% |
| !! | TTGGTGATTGGTTTCCTCTC+GGG | + | chr5.4:19601493-19601512 | MS.gene35262:CDS | 45.0% |
| !!! | TGCTGCTTTTTCCTTCAGGA+AGG | - | chr5.4:19603603-19603622 | None:intergenic | 45.0% |
| !!! | ATAAATTTTAATTATATTTG+AGG | + | chr5.4:19602099-19602118 | MS.gene35262:intron | 5.0% |
| AAAGTAATTGGCCACGGGGA+AGG | - | chr5.4:19602201-19602220 | None:intergenic | 50.0% | |
| AACATTTGGGCAGTCTGCAC+GGG | + | chr5.4:19604093-19604112 | MS.gene35262:CDS | 50.0% | |
| AACCATGACTGAAGCCTGCA+TGG | - | chr5.4:19601332-19601351 | None:intergenic | 50.0% | |
| AAGATCACCACCGAAGAGAG+AGG | + | chr5.4:19603794-19603813 | MS.gene35262:intron | 50.0% | |
| AATTCCAAAGCTGCGTGACC+AGG | - | chr5.4:19601120-19601139 | None:intergenic | 50.0% | |
| ACATTGCCCCGGTGATTCTT+TGG | - | chr5.4:19598756-19598775 | None:intergenic | 50.0% | |
| ACCTGACATCAAGCCCATAG+TGG | + | chr5.4:19603293-19603312 | MS.gene35262:CDS | 50.0% | |
| ACTTGTCTGAGTGGCAGCAA+TGG | - | chr5.4:19599072-19599091 | None:intergenic | 50.0% | |
| ATTCCAAAGCTGCGTGACCA+GGG | - | chr5.4:19601119-19601138 | None:intergenic | 50.0% | |
| CAGTATCCCATTCAGCAAGG+CGG | - | chr5.4:19600232-19600251 | None:intergenic | 50.0% | |
| CATCATTGCTCCACTGCATG+AGG | + | chr5.4:19603113-19603132 | MS.gene35262:intron | 50.0% | |
| CATCCTGTATGCTTACGCCA+TGG | + | chr5.4:19601834-19601853 | MS.gene35262:CDS | 50.0% | |
| CGACAAAGTAATTGGCCACG+GGG | - | chr5.4:19602205-19602224 | None:intergenic | 50.0% | |
| CTGTTCCCAAGCTGATCAGT+AGG | - | chr5.4:19600548-19600567 | None:intergenic | 50.0% | |
| GAGCCTTTGACGTTCTCTTG+GGG | + | chr5.4:19601202-19601221 | MS.gene35262:CDS | 50.0% | |
| GCACGAAGATATTGCAGTGC+TGG | + | chr5.4:19600410-19600429 | MS.gene35262:CDS | 50.0% | |
| GCACTGAGCAAAGCTTACCA+TGG | - | chr5.4:19601854-19601873 | None:intergenic | 50.0% | |
| GGAGCCTTTGACGTTCTCTT+GGG | + | chr5.4:19601201-19601220 | MS.gene35262:CDS | 50.0% | |
| GTGCAGACTGCCCAAATGTT+AGG | - | chr5.4:19604093-19604112 | None:intergenic | 50.0% | |
| GTTAGCAGCACTTGTCTGAG+TGG | - | chr5.4:19599081-19599100 | None:intergenic | 50.0% | |
| TACCATGCAGGCTTCAGTCA+TGG | + | chr5.4:19601327-19601346 | MS.gene35262:CDS | 50.0% | |
| TCCACTATGGGCTTGATGTC+AGG | - | chr5.4:19603297-19603316 | None:intergenic | 50.0% | |
| TCGCTTTGGCCCAATCTCAA+TGG | - | chr5.4:19603848-19603867 | None:intergenic | 50.0% | |
| TCTTGTGGCACGAGATTGCA+TGG | + | chr5.4:19599143-19599162 | MS.gene35262:CDS | 50.0% | |
| TGAGTGCTTCTGTACCTGCT+GGG | + | chr5.4:19600150-19600169 | MS.gene35262:CDS | 50.0% | |
| TGCAATCTCGTGCCACAAGA+AGG | - | chr5.4:19599143-19599162 | None:intergenic | 50.0% | |
| TGCCCAAAAATGAAGGGCCT+CGG | - | chr5.4:19603879-19603898 | None:intergenic | 50.0% | |
| TGGAGCCTTTGACGTTCTCT+TGG | + | chr5.4:19601200-19601219 | MS.gene35262:CDS | 50.0% | |
| TGTGTTTGCTCCCACAGATG+AGG | - | chr5.4:19602663-19602682 | None:intergenic | 50.0% | |
| TTGAGTGCTTCTGTACCTGC+TGG | + | chr5.4:19600149-19600168 | MS.gene35262:CDS | 50.0% | |
| ! | ACTGCGGAGCGTCAAAAACT+TGG | + | chr5.4:19601085-19601104 | MS.gene35262:CDS | 50.0% |
| ! | AGTCCGAGGCCCTTCATTTT+TGG | + | chr5.4:19603873-19603892 | MS.gene35262:intron | 50.0% |
| ! | AGTGGAGGAGATGCTTTGAG+AGG | + | chr5.4:19599113-19599132 | MS.gene35262:CDS | 50.0% |
| ! | GAAGCGCCTTCCATTGAGAT+TGG | + | chr5.4:19603835-19603854 | MS.gene35262:intron | 50.0% |
| ! | GATAATGGTAACCTTCCCCG+TGG | + | chr5.4:19602187-19602206 | MS.gene35262:intron | 50.0% |
| !! | GCAGGTACAGAAGCACTCAA+AGG | - | chr5.4:19600149-19600168 | None:intergenic | 50.0% |
| !! | GTCCGAGGCCCTTCATTTTT+GGG | + | chr5.4:19603874-19603893 | MS.gene35262:intron | 50.0% |
| !! | TGGTGATTGGTTTCCTCTCG+GGG | + | chr5.4:19601494-19601513 | MS.gene35262:CDS | 50.0% |
| !!! | TGCCTGCTGCTTTTTCCTTC+AGG | - | chr5.4:19603607-19603626 | None:intergenic | 50.0% |
| AAGCCTGCATGGTACGCTCT+AGG | - | chr5.4:19601321-19601340 | None:intergenic | 55.0% | |
| AGCCTGCATGGTACGCTCTA+GGG | - | chr5.4:19601320-19601339 | None:intergenic | 55.0% | |
| CCAAAGCGACTCAAAGTCCG+AGG | + | chr5.4:19603859-19603878 | MS.gene35262:intron | 55.0% | |
| CCTCGGACTTTGAGTCGCTT+TGG | - | chr5.4:19603862-19603881 | None:intergenic | 55.0% | |
| CTACTTGCAATAGCCCCGAG+AGG | - | chr5.4:19601510-19601529 | None:intergenic | 55.0% | |
| CTCTCGGGGCTATTGCAAGT+AGG | + | chr5.4:19601508-19601527 | MS.gene35262:CDS | 55.0% | |
| GAGTGCTTCTGTACCTGCTG+GGG | + | chr5.4:19600151-19600170 | MS.gene35262:CDS | 55.0% | |
| GCTGAAACCTCTCTCTTCGG+TGG | - | chr5.4:19603804-19603823 | None:intergenic | 55.0% | |
| GGAGCAGAGGAACAGTCATG+AGG | - | chr5.4:19603036-19603055 | None:intergenic | 55.0% | |
| TATCCCTGGTCACGCAGCTT+TGG | + | chr5.4:19601113-19601132 | MS.gene35262:CDS | 55.0% | |
| TGATTCAGGAAGCAGCCGCA+AGG | + | chr5.4:19604021-19604040 | MS.gene35262:intron | 55.0% | |
| TTCCCTAGAGCGTACCATGC+AGG | + | chr5.4:19601315-19601334 | MS.gene35262:CDS | 55.0% | |
| !! | TGCATGGTACGCTCTAGGGA+AGG | - | chr5.4:19601316-19601335 | None:intergenic | 55.0% |
| AGCCTCTCCGCCTTGCTGAA+TGG | + | chr5.4:19600222-19600241 | MS.gene35262:CDS | 60.0% | |
| ATTTGGGCAGTCTGCACGGG+TGG | + | chr5.4:19604096-19604115 | MS.gene35262:CDS | 60.0% | |
| GCCTCTCCGCCTTGCTGAAT+GGG | + | chr5.4:19600223-19600242 | MS.gene35262:CDS | 60.0% | |
| TCCCATTCAGCAAGGCGGAG+AGG | - | chr5.4:19600227-19600246 | None:intergenic | 60.0% | |
| AAGGCGGAGAGGCTGCACTC+TGG | - | chr5.4:19600216-19600235 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 19598720 | 19604128 | 19598720 | ID=MS.gene35262 |
| chr5.4 | mRNA | 19598720 | 19604128 | 19598720 | ID=MS.gene35262.t1;Parent=MS.gene35262 |
| chr5.4 | exon | 19598720 | 19598806 | 19598720 | ID=MS.gene35262.t1.exon1;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19598720 | 19598806 | 19598720 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19598984 | 19599329 | 19598984 | ID=MS.gene35262.t1.exon2;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19598984 | 19599329 | 19598984 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19600126 | 19600282 | 19600126 | ID=MS.gene35262.t1.exon3;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19600126 | 19600282 | 19600126 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19600364 | 19600583 | 19600364 | ID=MS.gene35262.t1.exon4;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19600364 | 19600583 | 19600364 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19600743 | 19600796 | 19600743 | ID=MS.gene35262.t1.exon5;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19600743 | 19600796 | 19600743 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19600873 | 19600952 | 19600873 | ID=MS.gene35262.t1.exon6;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19600873 | 19600952 | 19600873 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19601071 | 19601348 | 19601071 | ID=MS.gene35262.t1.exon7;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19601071 | 19601348 | 19601071 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19601460 | 19601855 | 19601460 | ID=MS.gene35262.t1.exon8;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19601460 | 19601855 | 19601460 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19602644 | 19603062 | 19602644 | ID=MS.gene35262.t1.exon9;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19602644 | 19603062 | 19602644 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19603180 | 19603428 | 19603180 | ID=MS.gene35262.t1.exon10;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19603180 | 19603428 | 19603180 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19603577 | 19603774 | 19603577 | ID=MS.gene35262.t1.exon11;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19603577 | 19603774 | 19603577 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| chr5.4 | exon | 19604084 | 19604128 | 19604084 | ID=MS.gene35262.t1.exon12;Parent=MS.gene35262.t1 |
| chr5.4 | CDS | 19604084 | 19604128 | 19604084 | ID=cds.MS.gene35262.t1;Parent=MS.gene35262.t1 |
| Gene Sequence |
| Protein sequence |
