AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35429

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35429.t1 MTR_2g086690 88.583 254 24 4 1 254 1 249 2.14e-163 452
MS.gene35429.t1 MTR_4g052620 60.150 266 87 8 1 253 1 260 5.76e-104 302
MS.gene35429.t1 MTR_7g105170 46.970 264 118 6 1 254 1 252 1.68e-77 235
MS.gene35429.t1 MTR_4g075980 43.103 174 79 6 6 175 17 174 5.42e-38 135
MS.gene35429.t1 MTR_4g134460 44.099 161 75 4 6 164 56 203 6.38e-38 137
MS.gene35429.t1 MTR_6g011860 41.954 174 87 6 1 167 12 178 1.94e-37 135
MS.gene35429.t1 MTR_6g477900 36.275 204 118 5 5 206 7 200 1.80e-36 129
MS.gene35429.t1 MTR_8g059170 46.795 156 75 5 5 160 15 162 2.42e-36 131
MS.gene35429.t1 MTR_5g041940 45.223 157 78 5 5 160 4 153 2.89e-36 129
MS.gene35429.t1 MTR_1g096430 44.654 159 73 7 5 160 8 154 5.40e-36 130
MS.gene35429.t1 MTR_5g021710 42.246 187 93 7 5 188 9 183 6.01e-36 130
MS.gene35429.t1 MTR_5g076850 36.087 230 122 7 5 226 7 219 1.55e-35 134
MS.gene35429.t1 MTR_5g014300 46.012 163 68 7 5 159 7 157 2.31e-35 129
MS.gene35429.t1 MTR_2g079990 45.570 158 72 5 5 160 17 162 2.92e-35 129
MS.gene35429.t1 MTR_2g062730 45.926 135 62 4 5 135 11 138 3.10e-35 129
MS.gene35429.t1 MTR_4g081870 42.675 157 82 4 5 160 10 159 5.84e-35 126
MS.gene35429.t1 MTR_8g076110 50.000 134 57 6 5 135 7 133 9.91e-35 127
MS.gene35429.t1 MTR_4g098630 35.945 217 118 7 5 209 7 214 1.66e-34 126
MS.gene35429.t1 MTR_2g064090 44.937 158 76 7 5 160 7 155 2.08e-34 127
MS.gene35429.t1 MTR_8g024480 36.538 208 107 9 5 199 16 211 2.26e-34 128
MS.gene35429.t1 MTR_4g035590 42.424 165 79 7 5 166 9 160 4.86e-34 125
MS.gene35429.t1 MTR_3g064580 42.405 158 80 5 5 160 7 155 4.88e-34 129
MS.gene35429.t1 MTR_3g070030 47.328 131 62 4 5 135 20 143 7.27e-34 125
MS.gene35429.t1 MTR_5g040420 34.703 219 119 9 6 213 16 221 8.01e-34 126
MS.gene35429.t1 MTR_4g036030 46.269 134 62 5 5 135 8 134 1.11e-33 125
MS.gene35429.t1 MTR_3g116070 47.586 145 65 5 5 145 24 161 1.30e-33 124
MS.gene35429.t1 MTR_2g086880 48.062 129 61 4 6 134 20 142 2.10e-33 127
MS.gene35429.t1 MTR_2g079990 47.826 138 61 4 5 140 17 145 2.14e-33 124
MS.gene35429.t1 MTR_2g086880 48.062 129 61 4 6 134 20 142 2.39e-33 126
MS.gene35429.t1 MTR_1g069805 43.038 158 74 6 5 160 11 154 3.06e-33 122
MS.gene35429.t1 MTR_8g094580 40.341 176 85 7 5 173 8 170 1.05e-32 120
MS.gene35429.t1 MTR_8g467490 39.634 164 82 5 6 160 16 171 1.14e-32 123
MS.gene35429.t1 MTR_2157s0010 43.529 170 78 6 5 164 9 170 1.57e-32 120
MS.gene35429.t1 MTR_4g108760 37.975 158 90 4 3 160 16 165 1.64e-32 122
MS.gene35429.t1 MTR_5g012080 46.269 134 63 5 5 135 8 135 1.73e-32 121
MS.gene35429.t1 MTR_1g008740 43.478 138 66 4 2 135 11 140 1.89e-32 121
MS.gene35429.t1 MTR_1g008740 43.478 138 66 4 2 135 25 154 2.21e-32 121
MS.gene35429.t1 MTR_3g109340 41.818 165 84 6 2 165 20 173 2.40e-32 121
MS.gene35429.t1 MTR_2g078700 44.697 132 66 3 5 135 24 149 2.61e-32 122
MS.gene35429.t1 MTR_2g064470 42.949 156 78 6 5 160 12 156 2.94e-32 120
MS.gene35429.t1 MTR_3g096920 41.317 167 88 5 5 170 8 165 3.15e-32 119
MS.gene35429.t1 MTR_3g088110 43.636 165 79 6 5 166 8 161 3.35e-32 119
MS.gene35429.t1 MTR_3g109340 41.818 165 85 6 2 165 20 174 3.78e-32 121
MS.gene35429.t1 MTR_7g085220 38.922 167 83 5 5 160 9 167 4.22e-32 120
MS.gene35429.t1 MTR_7g097090 42.038 157 77 5 5 160 11 154 4.50e-32 119
MS.gene35429.t1 MTR_3g435150 40.252 159 81 5 5 160 17 164 7.58e-32 119
MS.gene35429.t1 MTR_4g089135 40.761 184 78 7 5 165 16 191 9.39e-32 119
MS.gene35429.t1 MTR_4g101680 41.509 159 78 7 5 160 8 154 1.10e-31 120
MS.gene35429.t1 MTR_6g084430 40.252 159 83 6 2 160 3 149 1.50e-31 119
MS.gene35429.t1 MTR_6g012670 38.824 170 96 4 5 174 21 182 1.69e-31 118
MS.gene35429.t1 MTR_2g093810 32.031 256 145 8 5 242 15 259 2.87e-31 118
MS.gene35429.t1 MTR_3g093040 40.764 157 83 6 5 160 109 256 4.55e-31 117
MS.gene35429.t1 MTR_7g011120 44.615 130 65 4 6 135 10 132 8.29e-31 116
MS.gene35429.t1 MTR_3g096140 40.252 159 87 6 6 164 9 159 8.65e-31 115
MS.gene35429.t1 MTR_7g005280 42.138 159 75 6 5 161 16 159 1.31e-30 114
MS.gene35429.t1 MTR_5g069030 41.667 156 83 5 5 160 26 173 3.51e-30 118
MS.gene35429.t1 MTR_3g096140 40.252 159 87 6 6 164 9 159 4.20e-30 115
MS.gene35429.t1 MTR_2g080010 37.755 196 95 8 5 187 16 197 5.45e-30 115
MS.gene35429.t1 MTR_6g032770 41.791 134 71 3 3 135 17 144 1.04e-29 115
MS.gene35429.t1 MTR_3g096920 45.038 131 64 3 5 135 8 130 1.71e-29 113
MS.gene35429.t1 MTR_2g068880 39.037 187 95 8 2 174 19 200 1.76e-29 113
MS.gene35429.t1 MTR_8g099750 41.250 160 83 4 5 161 15 166 2.03e-29 110
MS.gene35429.t1 MTR_7g011130 44.961 129 64 4 7 135 22 143 2.15e-29 113
MS.gene35429.t1 MTR_7g100990 40.000 165 87 5 5 165 12 168 3.24e-29 112
MS.gene35429.t1 MTR_3g093050 40.385 156 85 5 5 160 23 170 3.45e-29 115
MS.gene35429.t1 MTR_8g023840 41.139 158 80 5 3 159 10 155 3.69e-29 114
MS.gene35429.t1 MTR_3g093050 40.385 156 85 5 5 160 23 170 4.38e-29 115
MS.gene35429.t1 MTR_8g063550 38.365 159 90 6 6 164 8 158 8.04e-29 113
MS.gene35429.t1 MTR_1g090720 38.608 158 89 4 6 160 44 196 9.19e-29 113
MS.gene35429.t1 MTR_8g063550 38.365 159 90 6 6 164 8 158 1.01e-28 111
MS.gene35429.t1 MTR_0036s0150 36.875 160 93 4 6 165 7 158 1.06e-28 114
MS.gene35429.t1 MTR_7g085260 36.646 161 92 4 3 160 16 169 1.13e-28 112
MS.gene35429.t1 MTR_8g063550 38.710 155 87 6 6 160 8 154 1.16e-28 112
MS.gene35429.t1 MTR_1g097300 45.185 135 69 4 4 138 19 148 3.00e-28 112
MS.gene35429.t1 MTR_5g090970 38.415 164 84 5 6 160 20 175 5.04e-28 109
MS.gene35429.t1 MTR_3g098810 40.123 162 83 4 5 160 15 168 9.01e-28 107
MS.gene35429.t1 MTR_8g093580 37.736 159 91 6 6 164 8 158 1.80e-27 110
MS.gene35429.t1 MTR_2g068920 38.235 170 88 6 2 159 18 182 2.04e-27 107
MS.gene35429.t1 MTR_5g090970 37.576 165 85 5 6 160 20 176 2.43e-27 107
MS.gene35429.t1 MTR_1g090723 36.875 160 93 5 6 165 10 161 3.04e-27 110
MS.gene35429.t1 MTR_1g090723 36.875 160 93 5 6 165 10 161 3.18e-27 110
MS.gene35429.t1 MTR_1g090723 37.500 160 93 5 6 165 10 162 3.39e-27 110
MS.gene35429.t1 MTR_8g023860 37.500 160 87 5 1 159 9 156 4.12e-27 108
MS.gene35429.t1 MTR_3g098810 44.118 136 65 3 5 137 15 142 1.07e-26 102
MS.gene35429.t1 MTR_3g070040 43.411 129 61 4 8 135 12 129 4.10e-26 104
MS.gene35429.t1 MTR_8g023900 37.179 156 87 5 5 159 13 158 5.36e-25 103
MS.gene35429.t1 MTR_8g023900 39.610 154 80 5 7 159 196 337 6.16e-25 102
MS.gene35429.t1 MTR_8g023930 38.462 156 83 5 5 159 25 168 1.10e-23 99.4
MS.gene35429.t1 MTR_4g094302 41.353 133 61 5 5 135 12 129 1.08e-22 92.0
MS.gene35429.t1 MTR_4g094302 41.353 133 61 5 5 135 12 129 1.39e-22 90.9
MS.gene35429.t1 MTR_3g096140 37.241 145 83 6 20 164 2 138 1.67e-22 94.7
MS.gene35429.t1 MTR_8g023880 35.673 171 77 8 5 159 8 161 2.19e-22 93.2
MS.gene35429.t1 MTR_8g094580 41.964 112 61 3 64 173 7 116 4.35e-22 91.7
MS.gene35429.t1 MTR_7g070140 40.659 91 48 3 61 149 14 100 6.94e-15 70.1
MS.gene35429.t1 MTR_7g083360 31.034 145 93 3 3 147 9 146 9.57e-15 70.1
MS.gene35429.t1 MTR_3g096400 29.697 165 98 5 5 162 8 161 6.03e-14 68.9
MS.gene35429.t1 MTR_8g093790 31.410 156 77 7 5 160 11 136 4.25e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35429.t1 AT5G22380 54.000 250 89 5 7 253 8 234 3.31e-85 254
MS.gene35429.t1 AT3G44350 51.190 252 109 5 2 253 3 240 6.04e-83 248
MS.gene35429.t1 AT3G44350 56.875 160 66 2 2 161 3 159 5.17e-61 189
MS.gene35429.t1 AT4G17980 46.835 158 74 6 5 159 7 157 4.10e-39 137
MS.gene35429.t1 AT4G17980 46.835 158 74 6 5 159 7 157 6.21e-39 137
MS.gene35429.t1 AT2G02450 43.949 157 73 4 6 160 53 196 2.07e-38 138
MS.gene35429.t1 AT2G02450 43.949 157 73 4 6 160 53 196 3.12e-38 138
MS.gene35429.t1 AT2G17040 42.105 171 79 6 6 172 8 162 6.39e-38 134
MS.gene35429.t1 AT3G15500 47.468 158 69 6 5 160 15 160 3.37e-37 133
MS.gene35429.t1 AT3G17730 38.144 194 102 6 5 196 7 184 4.18e-37 131
MS.gene35429.t1 AT5G66300 46.541 159 71 7 5 160 13 160 5.61e-37 132
MS.gene35429.t1 AT4G10350 41.753 194 93 9 5 192 10 189 7.73e-36 130
MS.gene35429.t1 AT1G52890 45.570 158 72 5 5 160 15 160 8.00e-36 130
MS.gene35429.t1 AT5G46590 43.949 157 78 5 5 159 7 155 8.20e-36 129
MS.gene35429.t1 AT3G12910 42.169 166 80 5 6 160 23 183 2.57e-35 128
MS.gene35429.t1 AT1G69490 41.975 162 86 4 5 165 10 164 3.39e-35 127
MS.gene35429.t1 AT4G36160 42.286 175 77 7 5 176 11 164 3.50e-35 129
MS.gene35429.t1 AT4G36160 42.286 175 77 7 5 176 11 164 3.50e-35 129
MS.gene35429.t1 AT4G36160 42.286 175 77 7 5 176 15 168 3.52e-35 129
MS.gene35429.t1 AT1G32510 43.558 163 76 6 5 159 7 161 4.60e-35 127
MS.gene35429.t1 AT4G27410 44.937 158 73 7 5 160 15 160 4.88e-35 127
MS.gene35429.t1 AT2G18060 45.283 159 72 7 5 160 10 156 5.02e-35 129
MS.gene35429.t1 AT2G18060 45.283 159 72 7 5 160 10 156 5.02e-35 129
MS.gene35429.t1 AT2G24430 40.625 160 84 4 2 160 14 163 5.39e-35 127
MS.gene35429.t1 AT2G24430 40.625 160 84 4 2 160 14 163 5.39e-35 127
MS.gene35429.t1 AT3G49530 41.875 160 86 5 1 160 10 162 7.32e-35 129
MS.gene35429.t1 AT3G49530 41.875 160 86 5 1 160 10 162 1.29e-34 129
MS.gene35429.t1 AT5G61430 41.139 158 85 4 3 160 15 164 1.31e-34 127
MS.gene35429.t1 AT4G27410 42.604 169 78 7 5 160 15 177 1.72e-34 126
MS.gene35429.t1 AT1G33060 43.125 160 83 5 1 160 21 172 2.08e-34 130
MS.gene35429.t1 AT5G17260 43.671 158 78 5 5 160 7 155 2.13e-34 129
MS.gene35429.t1 AT4G35580 43.750 160 82 6 1 160 6 157 2.16e-34 129
MS.gene35429.t1 AT1G33060 43.125 160 83 5 1 160 21 172 2.18e-34 130
MS.gene35429.t1 AT4G35580 43.750 160 82 6 1 160 6 157 2.19e-34 129
MS.gene35429.t1 AT5G24590 46.269 134 68 2 5 138 14 143 2.28e-34 128
MS.gene35429.t1 AT4G35580 43.750 160 82 6 1 160 6 157 2.34e-34 129
MS.gene35429.t1 AT5G46590 44.079 152 75 5 5 154 7 150 3.73e-34 124
MS.gene35429.t1 AT1G65910 43.590 156 80 4 5 160 7 154 4.13e-34 129
MS.gene35429.t1 AT3G61910 36.744 215 108 8 5 198 12 219 7.90e-34 125
MS.gene35429.t1 AT1G71930 48.507 134 59 5 5 135 10 136 1.06e-33 124
MS.gene35429.t1 AT1G71930 48.507 134 59 5 5 135 10 136 1.06e-33 124
MS.gene35429.t1 AT1G76420 42.073 164 78 6 5 164 23 173 1.66e-33 124
MS.gene35429.t1 AT1G79580 45.926 135 62 4 5 135 18 145 1.74e-33 125
MS.gene35429.t1 AT1G79580 45.926 135 62 4 5 135 18 145 1.74e-33 125
MS.gene35429.t1 AT1G79580 45.926 135 62 4 5 135 18 145 1.74e-33 125
MS.gene35429.t1 AT1G79580 45.926 135 62 4 5 135 18 145 1.74e-33 125
MS.gene35429.t1 AT1G79580 45.926 135 62 4 5 135 18 145 1.74e-33 125
MS.gene35429.t1 AT3G18400 43.210 162 75 7 2 160 3 150 3.20e-33 123
MS.gene35429.t1 AT1G61110 41.916 167 78 5 5 160 17 175 3.24e-33 123
MS.gene35429.t1 AT5G07680 39.241 158 88 4 3 160 2 151 7.57e-33 122
MS.gene35429.t1 AT5G07680 39.241 158 88 4 3 160 16 165 8.96e-33 122
MS.gene35429.t1 AT1G56010 41.667 156 85 4 5 160 20 169 1.17e-32 121
MS.gene35429.t1 AT5G62380 38.608 158 84 5 5 160 8 154 1.54e-32 122
MS.gene35429.t1 AT5G62380 38.608 158 84 5 5 160 8 154 1.54e-32 122
MS.gene35429.t1 AT1G33280 45.714 140 66 5 5 141 9 141 2.80e-32 120
MS.gene35429.t1 AT1G26870 45.714 140 62 6 1 135 12 142 2.97e-32 122
MS.gene35429.t1 AT1G01720 42.683 164 81 5 5 165 8 161 3.66e-32 119
MS.gene35429.t1 AT5G08790 36.279 215 105 8 5 197 8 212 3.73e-32 119
MS.gene35429.t1 AT3G15170 39.024 164 92 4 5 167 21 177 6.46e-32 119
MS.gene35429.t1 AT2G46770 40.828 169 80 8 5 160 17 178 6.47e-32 120
MS.gene35429.t1 AT3G04070 40.678 177 86 6 5 170 11 179 8.27e-32 120
MS.gene35429.t1 AT1G32770 47.015 134 61 6 5 135 17 143 9.08e-32 120
MS.gene35429.t1 AT5G18270 37.500 160 93 3 1 160 18 170 1.06e-31 119
MS.gene35429.t1 AT1G77450 37.500 208 106 8 5 207 11 199 1.10e-31 117
MS.gene35429.t1 AT3G10490 38.854 157 85 5 6 160 29 176 1.12e-31 117
MS.gene35429.t1 AT1G54330 42.949 156 78 5 5 160 7 151 1.17e-31 118
MS.gene35429.t1 AT5G63790 40.659 182 92 7 5 181 51 221 1.48e-31 118
MS.gene35429.t1 AT3G12977 38.462 156 87 4 5 160 19 165 2.26e-31 117
MS.gene35429.t1 AT5G63790 40.659 182 92 7 5 181 61 231 2.37e-31 118
MS.gene35429.t1 AT3G04060 37.975 158 91 3 3 160 19 169 2.75e-31 118
MS.gene35429.t1 AT5G18270 36.875 160 94 3 1 160 18 170 2.95e-31 118
MS.gene35429.t1 AT1G12260 45.522 134 63 5 5 135 8 134 3.01e-31 118
MS.gene35429.t1 AT3G03200 41.401 157 83 5 5 160 7 155 3.27e-31 120
MS.gene35429.t1 AT3G10480 39.490 157 84 5 6 160 29 176 4.08e-31 119
MS.gene35429.t1 AT1G12260 45.522 134 63 5 5 135 8 134 4.74e-31 119
MS.gene35429.t1 AT2G43000 39.490 157 82 5 6 160 20 165 6.19e-31 116
MS.gene35429.t1 AT3G04070 42.568 148 71 4 5 146 11 150 1.33e-30 117
MS.gene35429.t1 AT5G39610 38.608 158 89 4 3 160 19 168 2.21e-30 114
MS.gene35429.t1 AT3G10480 38.854 157 84 5 6 160 29 175 3.23e-30 117
MS.gene35429.t1 AT5G39820 41.379 145 76 5 6 148 22 159 3.64e-30 115
MS.gene35429.t1 AT1G62700 44.776 134 64 5 5 135 8 134 4.80e-30 116
MS.gene35429.t1 AT1G62700 44.776 134 64 5 5 135 8 134 4.80e-30 116
MS.gene35429.t1 AT3G10490 38.854 157 85 5 6 160 29 176 6.37e-30 116
MS.gene35429.t1 AT3G29035 37.975 158 90 4 3 160 23 172 6.68e-30 114
MS.gene35429.t1 AT5G53950 44.361 133 65 4 5 135 18 143 1.01e-29 115
MS.gene35429.t1 AT2G33480 39.873 158 78 5 5 161 16 157 2.90e-29 111
MS.gene35429.t1 AT1G34190 39.506 162 90 5 4 165 16 169 7.04e-29 114
MS.gene35429.t1 AT3G15510 40.964 166 75 7 8 160 21 176 8.52e-29 112
MS.gene35429.t1 AT3G10500 37.500 160 92 5 6 165 11 162 1.23e-28 114
MS.gene35429.t1 AT3G44290 43.939 132 68 4 6 137 16 141 1.80e-28 108
MS.gene35429.t1 AT2G33480 39.506 162 75 6 5 161 16 159 2.63e-28 108
MS.gene35429.t1 AT1G34180 44.444 135 70 5 4 138 16 145 3.48e-28 111
MS.gene35429.t1 AT4G28530 37.427 171 81 5 5 160 11 170 3.65e-28 110
MS.gene35429.t1 AT3G44290 43.182 132 69 4 6 137 16 141 5.57e-28 109
MS.gene35429.t1 AT5G13180 44.361 133 62 4 5 135 15 137 6.60e-28 107
MS.gene35429.t1 AT1G34180 44.444 135 70 5 4 138 16 145 7.08e-28 112
MS.gene35429.t1 AT2G27300 42.308 130 67 4 6 134 16 138 8.08e-28 109
MS.gene35429.t1 AT5G09330 45.385 130 66 4 6 135 8 132 8.45e-28 111
MS.gene35429.t1 AT5G09330 45.385 130 66 4 6 135 8 132 8.45e-28 111
MS.gene35429.t1 AT5G09330 45.385 130 66 4 6 135 8 132 8.45e-28 111
MS.gene35429.t1 AT5G09330 45.385 130 66 4 6 135 8 132 8.45e-28 111
MS.gene35429.t1 AT5G09330 45.385 130 66 4 6 135 8 132 8.45e-28 111
MS.gene35429.t1 AT5G22290 42.636 129 68 4 6 134 23 145 1.01e-27 108
MS.gene35429.t1 AT5G64060 38.125 160 89 6 6 164 8 158 4.28e-27 107
MS.gene35429.t1 AT5G04410 38.125 160 91 6 6 165 11 162 4.38e-27 109
MS.gene35429.t1 AT1G34180 40.690 145 73 5 4 138 16 157 2.08e-26 107
MS.gene35429.t1 AT1G34180 40.690 145 73 5 4 138 16 157 4.74e-26 106
MS.gene35429.t1 AT3G10480 32.979 188 86 6 6 160 29 209 3.71e-25 103
MS.gene35429.t1 AT3G04420 32.484 157 95 3 3 159 2 147 3.93e-24 98.6
MS.gene35429.t1 AT3G04420 32.484 157 95 3 3 159 2 147 1.34e-23 97.8
MS.gene35429.t1 AT4G01550 40.769 130 72 3 7 134 7 133 9.48e-23 96.7
MS.gene35429.t1 AT1G52880 38.596 171 87 5 8 168 21 183 1.40e-22 94.7
MS.gene35429.t1 AT5G04395 34.965 143 76 5 5 134 29 167 8.25e-22 89.7
MS.gene35429.t1 AT4G10350 40.690 145 72 7 54 192 6 142 2.64e-21 90.9
MS.gene35429.t1 AT1G32870 36.875 160 93 5 6 165 12 163 2.89e-21 92.8
MS.gene35429.t1 AT1G32870 36.875 160 93 5 6 165 12 163 3.07e-21 92.8
MS.gene35429.t1 AT1G32870 36.875 160 93 5 6 165 48 199 4.74e-21 92.4
MS.gene35429.t1 AT4G01520 36.765 136 82 2 1 134 1 134 6.88e-21 89.7
MS.gene35429.t1 AT1G56010 42.268 97 55 1 64 160 7 102 1.53e-20 88.2
MS.gene35429.t1 AT3G12977 40.385 104 59 2 57 160 12 112 2.52e-20 86.7
MS.gene35429.t1 AT4G01540 35.897 156 86 5 7 159 7 151 3.31e-20 89.4
MS.gene35429.t1 AT4G01540 39.695 131 73 4 7 134 7 134 3.45e-20 89.4
MS.gene35429.t1 AT4G01540 39.695 131 73 4 7 134 7 134 3.54e-20 89.4
MS.gene35429.t1 AT4G01540 35.897 156 86 5 7 159 7 151 3.74e-20 89.0
MS.gene35429.t1 AT5G64530 39.394 132 59 7 5 134 4 116 6.85e-20 84.0
MS.gene35429.t1 AT5G61430 41.237 97 55 2 64 160 7 101 7.74e-20 86.7
MS.gene35429.t1 AT5G64530 37.879 132 61 6 5 134 4 116 9.01e-20 84.3
MS.gene35429.t1 AT1G02230 35.821 134 79 3 5 136 4 132 3.84e-19 85.9
MS.gene35429.t1 AT1G01010 35.461 141 79 4 1 134 1 136 4.29e-18 83.2
MS.gene35429.t1 AT1G02250 31.210 157 94 4 5 159 4 148 5.49e-18 82.4
MS.gene35429.t1 AT3G56530 30.573 157 100 5 5 161 53 200 3.39e-16 77.0
MS.gene35429.t1 AT2G33480 39.623 106 51 4 61 161 5 102 4.73e-16 75.1
MS.gene35429.t1 AT1G02220 31.818 132 84 3 3 134 2 127 7.89e-16 76.6
MS.gene35429.t1 AT4G28530 36.364 110 52 2 5 100 11 116 7.74e-15 73.2
MS.gene35429.t1 AT2G43000 42.500 80 43 2 81 160 11 87 4.74e-14 69.3
MS.gene35429.t1 AT5G50820 29.814 161 96 5 5 162 18 164 1.37e-13 67.8
MS.gene35429.t1 AT5G14000 30.570 193 114 7 5 193 16 192 3.91e-13 67.0
MS.gene35429.t1 AT3G55210 26.786 168 101 5 5 161 12 168 6.99e-13 67.4
MS.gene35429.t1 AT2G18060 43.836 73 35 2 88 160 2 68 2.06e-12 65.9
MS.gene35429.t1 AT3G10490 41.026 78 43 2 83 160 2 76 3.96e-12 65.5
MS.gene35429.t1 AT3G10490 41.026 78 43 2 83 160 2 76 3.96e-12 65.5

Find 75 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTAACAACAAAGTTAT+TGG 0.141170 2.1:-15514485 MS.gene35429:CDS
GGGAATGGGAACAACTAAAT+TGG 0.237761 2.1:-15513612 MS.gene35429:CDS
GGTTCATCAACCCCATTATT+TGG 0.243110 2.1:+15513649 None:intergenic
TGGAATGATGTACCAAATAA+TGG 0.268563 2.1:-15513661 MS.gene35429:CDS
TGCTTGTAATCAGCATTTGC+AGG 0.308629 2.1:-15514644 MS.gene35429:intron
ACAACAAAGTTATTGGAATA+AGG 0.320903 2.1:-15514478 MS.gene35429:CDS
ATGAACCTGACGAGCCTCTT+TGG 0.329425 2.1:-15513633 MS.gene35429:CDS
TCAAGTTGTAACTCCGTCTT+TGG 0.337961 2.1:+15513820 None:intergenic
CCTGATGCTGCTCTTAATAT+TGG 0.341714 2.1:-15513703 MS.gene35429:CDS
GGAATGATGTACCAAATAAT+GGG 0.347934 2.1:-15513660 MS.gene35429:CDS
TGAACCTGACGAGCCTCTTT+GGG 0.365510 2.1:-15513632 MS.gene35429:CDS
CCACAAGATGTTGTTCTGTT+TGG 0.369650 2.1:+15514545 None:intergenic
CATCTGGAAGGAAAACAAAA+TGG 0.371311 2.1:-15514424 MS.gene35429:CDS
GAACAACATCTTGTGGGTAT+TGG 0.373317 2.1:-15514538 MS.gene35429:CDS
TCCGTCTTTGGCCCCTCTAA+TGG 0.374360 2.1:+15513832 None:intergenic
GTGTCGCGTTTATGTGATAT+CGG 0.388670 2.1:-15513881 MS.gene35429:CDS
CATTCCCAAAGAGGCTCGTC+AGG 0.403826 2.1:+15513628 None:intergenic
CCAATATTAAGAGCAGCATC+AGG 0.411283 2.1:+15513703 None:intergenic
GAGGGTCAAGTGGCACGAAT+TGG 0.422284 2.1:-15513681 MS.gene35429:CDS
TACCTTAGGAGGGTTTGTAT+TGG 0.427109 2.1:+15514361 None:intergenic
CTCAACTCTCTCTCTTGTCT+TGG 0.434756 2.1:+15514578 None:intergenic
ATTTGATCGAAGACCATTAG+AGG 0.450948 2.1:-15513845 MS.gene35429:CDS
TACATAGGAAAAGCTCCATC+TGG 0.458200 2.1:-15514440 MS.gene35429:CDS
TGACGAGCCTCTTTGGGAAT+GGG 0.462600 2.1:-15513626 MS.gene35429:CDS
TTAGGAGGGTTTGTATTGGA+TGG 0.467242 2.1:+15514365 None:intergenic
CTGACGAGCCTCTTTGGGAA+TGG 0.476253 2.1:-15513627 MS.gene35429:CDS
GGATGGATCAGATGGTTCAA+TGG 0.492070 2.1:+15514382 None:intergenic
TTGTGGGTATTGGAAAGCTA+CGG 0.496227 2.1:-15514528 MS.gene35429:CDS
ATACCTGTCATTGATATCAA+TGG 0.504577 2.1:-15515414 MS.gene35429:CDS
AATTGTGTTACGTACTTGGA+AGG 0.510602 2.1:+15515376 None:intergenic
TACGTACTTGGAAGGTTCCA+TGG 0.519792 2.1:+15515384 None:intergenic
TGTCGCGTTTATGTGATATC+GGG 0.520469 2.1:-15513880 MS.gene35429:CDS
GATGCTGCTCTTAATATTGG+AGG 0.523753 2.1:-15513700 MS.gene35429:CDS
AGTTGTTCCCATTCCCAAAG+AGG 0.523806 2.1:+15513619 None:intergenic
TTAGAAGAGTAAACGTAGCT+AGG 0.528675 2.1:+15514500 None:intergenic
CCTACAGAAGAAGAGCTAGT+TGG 0.532376 2.1:-15515492 MS.gene35429:CDS
TGTGGGTATTGGAAAGCTAC+GGG 0.533051 2.1:-15514527 MS.gene35429:CDS
TTTGTATTGGATGGATCAGA+TGG 0.533121 2.1:+15514374 None:intergenic
ACTTCCCACTCGGGAGAGGT+AGG 0.537886 2.1:-15513733 MS.gene35429:CDS
CAAGAGAGAGAGTTGAGTGG+TGG 0.538126 2.1:-15514572 MS.gene35429:CDS
AATATGGAGGATTCCCCACC+TGG 0.538171 2.1:-15515528 MS.gene35429:CDS
GCTTGTAATCAGCATTTGCA+GGG 0.540324 2.1:-15514643 MS.gene35429:intron
ATCAACTTCCCACTCGGGAG+AGG 0.543167 2.1:-15513737 MS.gene35429:CDS
CTTAATATTGGAGGGTCAAG+TGG 0.545128 2.1:-15513691 MS.gene35429:CDS
ATCCAATACAAACCCTCCTA+AGG 0.551696 2.1:-15514363 MS.gene35429:intron
CCAACTAGCTCTTCTTCTGT+AGG 0.552564 2.1:+15515492 None:intergenic
ACCATTAGAGGGGCCAAAGA+CGG 0.556738 2.1:-15513833 MS.gene35429:CDS
TTGCCATTGATATCAATGAC+AGG 0.570032 2.1:+15515411 None:intergenic
AAACTTATCAACTTCCCACT+CGG 0.573290 2.1:-15513743 MS.gene35429:CDS
ATATCAATGGCAAAGAGCCA+TGG 0.579611 2.1:-15515401 MS.gene35429:CDS
CAAACAGAACAACATCTTGT+GGG 0.582806 2.1:-15514544 MS.gene35429:CDS
CTTCTATCTACACAACCAGC+TGG 0.586767 2.1:-15515469 MS.gene35429:CDS
AACTTATCAACTTCCCACTC+GGG 0.587994 2.1:-15513742 MS.gene35429:CDS
CTTCCCACTCGGGAGAGGTA+GGG 0.590713 2.1:-15513732 MS.gene35429:CDS
TTTGATCGAAGACCATTAGA+GGG 0.593675 2.1:-15513844 MS.gene35429:CDS
TCTCCCTACCTCTCCCGAGT+GGG 0.595426 2.1:+15513729 None:intergenic
ATGCTGCTCTTAATATTGGA+GGG 0.598605 2.1:-15513699 MS.gene35429:CDS
CTCTCCCTACCTCTCCCGAG+TGG 0.598952 2.1:+15513728 None:intergenic
CCAAACAGAACAACATCTTG+TGG 0.599917 2.1:-15514545 MS.gene35429:CDS
TAGGAAAAGCTCCATCTGGA+AGG 0.600654 2.1:-15514436 MS.gene35429:CDS
AACAAGTGCTCATCAACAAG+TGG 0.605093 2.1:-15513785 MS.gene35429:CDS
GTCGTGGAGACACAGAGCAA+TGG 0.605650 2.1:-15514613 MS.gene35429:CDS
CAATATTAAGAGCAGCATCA+GGG 0.618904 2.1:+15513704 None:intergenic
TATCTACACAACCAGCTGGA+AGG 0.633344 2.1:-15515465 MS.gene35429:CDS
TTTGCAGGGGAGAGATGTCG+TGG 0.639193 2.1:-15514629 MS.gene35429:CDS
ATAGAAACGAAAACCAGGTG+GGG 0.644775 2.1:+15515515 None:intergenic
GATAGAAACGAAAACCAGGT+GGG 0.647890 2.1:+15515514 None:intergenic
GTAGGATAGAAACGAAAACC+AGG 0.654759 2.1:+15515510 None:intergenic
CTTGTAATCAGCATTTGCAG+GGG 0.662090 2.1:-15514642 MS.gene35429:intron
TATTGGAATAAGGAAAACCA+TGG 0.672753 2.1:-15514468 MS.gene35429:CDS
AGACAAGAGAGAGAGTTGAG+TGG 0.675775 2.1:-15514575 MS.gene35429:CDS
TTGATCGAAGACCATTAGAG+GGG 0.685119 2.1:-15513843 MS.gene35429:CDS
GGATAGAAACGAAAACCAGG+TGG 0.690089 2.1:+15515513 None:intergenic
CAAGTGGTAGCAGAGCTCGA+TGG 0.690454 2.1:-15513769 MS.gene35429:CDS
GAATGATGTACCAAATAATG+GGG 0.703827 2.1:-15513659 MS.gene35429:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGATCAATAATTTATTT+TGG - chr2.1:15515197-15515216 MS.gene35429:intron 10.0%
!! AAAAAATAAGTACGAAATTT+GGG - chr2.1:15514207-15514226 MS.gene35429:intron 15.0%
!!! AAAAACTAAGCAATTTTTTT+AGG + chr2.1:15514263-15514282 None:intergenic 15.0%
!!! AAAACTAAGCAATTTTTTTA+GGG + chr2.1:15514262-15514281 None:intergenic 15.0%
!!! AAATTTCGTACTTATTTTTT+GGG + chr2.1:15514207-15514226 None:intergenic 15.0%
!!! ATCGTTTTTTTTTTTTTTTG+AGG - chr2.1:15513972-15513991 MS.gene35429:intron 15.0%
!!! TCGTTTTTTTTTTTTTTTGA+GGG - chr2.1:15513973-15513992 MS.gene35429:intron 15.0%
!!! TTATGATAAATATTTTAAGG+TGG + chr2.1:15514948-15514967 None:intergenic 15.0%
!! AAAATCACTAGATTAAGTAA+CGG + chr2.1:15513932-15513951 None:intergenic 20.0%
!! ATAAACCCCTAAAAAAAAAT+TGG + chr2.1:15514235-15514254 None:intergenic 20.0%
!! CAAAAAATAAGTACGAAATT+TGG - chr2.1:15514206-15514225 MS.gene35429:intron 20.0%
!! TAAACCCCTAAAAAAAAATT+GGG + chr2.1:15514234-15514253 None:intergenic 20.0%
!!! AATTTCGTACTTATTTTTTG+GGG + chr2.1:15514206-15514225 None:intergenic 20.0%
!!! ATATACAATAAATTTTGACG+CGG - chr2.1:15515099-15515118 MS.gene35429:intron 20.0%
!!! CAAATTTCGTACTTATTTTT+TGG + chr2.1:15514208-15514227 None:intergenic 20.0%
!!! TACTTTTTCAAATATACCTT+AGG + chr2.1:15514787-15514806 None:intergenic 20.0%
!!! TGAGATAATTTTTTTCTTCA+TGG + chr2.1:15513902-15513921 None:intergenic 20.0%
!!! TTTTTTTTTAGGGGTTTATT+AGG - chr2.1:15514236-15514255 MS.gene35429:intron 20.0%
! AAAAAATTGTGTTACGTACT+TGG + chr2.1:15513762-15513781 None:intergenic 25.0%
! AAACCCCTAAAAAAAAATTG+GGG + chr2.1:15514233-15514252 None:intergenic 25.0%
! AAATCACTAGATTAAGTAAC+GGG + chr2.1:15513931-15513950 None:intergenic 25.0%
! ACAACAAAGTTATTGGAATA+AGG - chr2.1:15514653-15514672 MS.gene35429:intron 25.0%
! ATGATATTATACCACATGTA+GGG - chr2.1:15514141-15514160 MS.gene35429:intron 25.0%
! GAAAATATCTACATGAATGA+CGG + chr2.1:15514120-15514139 None:intergenic 25.0%
! GACATATTATTTGAGAATCA+CGG + chr2.1:15514907-15514926 None:intergenic 25.0%
! TATGATATTATACCACATGT+AGG - chr2.1:15514140-15514159 MS.gene35429:intron 25.0%
! TCTTCTAACAACAAAGTTAT+TGG - chr2.1:15514646-15514665 MS.gene35429:intron 25.0%
! TGTCAATCTTAGACATATTT+AGG + chr2.1:15514097-15514116 None:intergenic 25.0%
!! ATTTTTCATAGATTCCCTAA+TGG - chr2.1:15514070-15514089 MS.gene35429:intron 25.0%
!! TTTTCAAATATACCTTAGGA+GGG + chr2.1:15514783-15514802 None:intergenic 25.0%
!! TTTTTCATAGATTCCCTAAT+GGG - chr2.1:15514071-15514090 MS.gene35429:intron 25.0%
!!! TTTTTCAAATATACCTTAGG+AGG + chr2.1:15514784-15514803 None:intergenic 25.0%
ATACCTGTCATTGATATCAA+TGG - chr2.1:15513717-15513736 MS.gene35429:CDS 30.0%
GAATGATGTACCAAATAATG+GGG - chr2.1:15515472-15515491 MS.gene35429:CDS 30.0%
GGAATGATGTACCAAATAAT+GGG - chr2.1:15515471-15515490 MS.gene35429:CDS 30.0%
TATTGGAATAAGGAAAACCA+TGG - chr2.1:15514663-15514682 MS.gene35429:intron 30.0%
TCTATCTATAAGTAGTGTCA+TGG - chr2.1:15514007-15514026 MS.gene35429:intron 30.0%
TGGAATGATGTACCAAATAA+TGG - chr2.1:15515470-15515489 MS.gene35429:CDS 30.0%
TTAGTTAGAACCCAAATTGT+AGG - chr2.1:15514367-15514386 MS.gene35429:CDS 30.0%
! AAAACCATGGTGTTTTACAT+AGG - chr2.1:15514676-15514695 MS.gene35429:intron 30.0%
! TTTTCCTATGTAAAACACCA+TGG + chr2.1:15514683-15514702 None:intergenic 30.0%
!! CTTATTTTTCCCTTCCTTTT+TGG - chr2.1:15514848-15514867 MS.gene35429:intron 30.0%
!!! GTACTTATTTTTTGGGGTAT+AGG + chr2.1:15514200-15514219 None:intergenic 30.0%
!!! TTATTTTTTGGGGTATAGGA+CGG + chr2.1:15514196-15514215 None:intergenic 30.0%
AAACACGATCCAAAAAGGAA+GGG + chr2.1:15514860-15514879 None:intergenic 35.0%
AAACTTATCAACTTCCCACT+CGG - chr2.1:15515388-15515407 MS.gene35429:intron 35.0%
AATTGTGTTACGTACTTGGA+AGG + chr2.1:15513758-15513777 None:intergenic 35.0%
AGACATATTTAGGCCCATTA+GGG + chr2.1:15514087-15514106 None:intergenic 35.0%
ATGCTGCTCTTAATATTGGA+GGG - chr2.1:15515432-15515451 MS.gene35429:CDS 35.0%
ATTACTCTCACATGTGTTCA+GGG + chr2.1:15514426-15514445 None:intergenic 35.0%
ATTTGATCGAAGACCATTAG+AGG - chr2.1:15515286-15515305 MS.gene35429:intron 35.0%
CAAACAGAACAACATCTTGT+GGG - chr2.1:15514587-15514606 MS.gene35429:CDS 35.0%
CAATATTAAGAGCAGCATCA+GGG + chr2.1:15515430-15515449 None:intergenic 35.0%
CACAATCTTGATTGTTGTCA+TGG + chr2.1:15514993-15515012 None:intergenic 35.0%
CATCTGGAAGGAAAACAAAA+TGG - chr2.1:15514707-15514726 MS.gene35429:intron 35.0%
TAGACATATTTAGGCCCATT+AGG + chr2.1:15514088-15514107 None:intergenic 35.0%
TATTACTCTCACATGTGTTC+AGG + chr2.1:15514427-15514446 None:intergenic 35.0%
TTAGAAGAGTAAACGTAGCT+AGG + chr2.1:15514634-15514653 None:intergenic 35.0%
TTGCCATTGATATCAATGAC+AGG + chr2.1:15513723-15513742 None:intergenic 35.0%
TTTGATCGAAGACCATTAGA+GGG - chr2.1:15515287-15515306 MS.gene35429:intron 35.0%
TTTGTATTGGATGGATCAGA+TGG + chr2.1:15514760-15514779 None:intergenic 35.0%
!!! CATTTTGTTTTCCTTCCAGA+TGG + chr2.1:15514709-15514728 None:intergenic 35.0%
!!! TGGGCCCCAATTTTTTTTTA+GGG - chr2.1:15514226-15514245 MS.gene35429:intron 35.0%
!!! TTGGGCCCCAATTTTTTTTT+AGG - chr2.1:15514225-15514244 MS.gene35429:intron 35.0%
AACAAGTGCTCATCAACAAG+TGG - chr2.1:15515346-15515365 MS.gene35429:intron 40.0%
AACTTATCAACTTCCCACTC+GGG - chr2.1:15515389-15515408 MS.gene35429:intron 40.0%
ACCTCAAACACGATCCAAAA+AGG + chr2.1:15514865-15514884 None:intergenic 40.0%
ATAGAAACGAAAACCAGGTG+GGG + chr2.1:15513619-15513638 None:intergenic 40.0%
ATATCAATGGCAAAGAGCCA+TGG - chr2.1:15513730-15513749 MS.gene35429:CDS 40.0%
ATCCAATACAAACCCTCCTA+AGG - chr2.1:15514768-15514787 MS.gene35429:intron 40.0%
CAAACACGATCCAAAAAGGA+AGG + chr2.1:15514861-15514880 None:intergenic 40.0%
CACATGTAGGGTTGTATATG+AGG - chr2.1:15514153-15514172 MS.gene35429:intron 40.0%
CCAAACAGAACAACATCTTG+TGG - chr2.1:15514586-15514605 MS.gene35429:CDS 40.0%
CCAATATTAAGAGCAGCATC+AGG + chr2.1:15515431-15515450 None:intergenic 40.0%
CCACAAGATGTTGTTCTGTT+TGG + chr2.1:15514589-15514608 None:intergenic 40.0%
CCTGATGCTGCTCTTAATAT+TGG - chr2.1:15515428-15515447 MS.gene35429:CDS 40.0%
CTAGGACGAACCTACAATTT+GGG + chr2.1:15514380-15514399 None:intergenic 40.0%
CTCATATACAACCCTACATG+TGG + chr2.1:15514155-15514174 None:intergenic 40.0%
CTTAATATTGGAGGGTCAAG+TGG - chr2.1:15515440-15515459 MS.gene35429:CDS 40.0%
CTTGTAATCAGCATTTGCAG+GGG - chr2.1:15514489-15514508 MS.gene35429:CDS 40.0%
GAACAACATCTTGTGGGTAT+TGG - chr2.1:15514593-15514612 MS.gene35429:CDS 40.0%
GATAGAAACGAAAACCAGGT+GGG + chr2.1:15513620-15513639 None:intergenic 40.0%
GATGCTGCTCTTAATATTGG+AGG - chr2.1:15515431-15515450 MS.gene35429:CDS 40.0%
GCTTGTAATCAGCATTTGCA+GGG - chr2.1:15514488-15514507 MS.gene35429:CDS 40.0%
GGGAATGGGAACAACTAAAT+TGG - chr2.1:15515519-15515538 MS.gene35429:CDS 40.0%
GGTTCATCAACCCCATTATT+TGG + chr2.1:15515485-15515504 None:intergenic 40.0%
GTAGGATAGAAACGAAAACC+AGG + chr2.1:15513624-15513643 None:intergenic 40.0%
GTGTCGCGTTTATGTGATAT+CGG - chr2.1:15515250-15515269 MS.gene35429:intron 40.0%
TACATAGGAAAAGCTCCATC+TGG - chr2.1:15514691-15514710 MS.gene35429:intron 40.0%
TACCTTAGGAGGGTTTGTAT+TGG + chr2.1:15514773-15514792 None:intergenic 40.0%
TGCTTGTAATCAGCATTTGC+AGG - chr2.1:15514487-15514506 MS.gene35429:CDS 40.0%
TGTCGCGTTTATGTGATATC+GGG - chr2.1:15515251-15515270 MS.gene35429:intron 40.0%
TTACTCTCACATGTGTTCAG+GGG + chr2.1:15514425-15514444 None:intergenic 40.0%
TTAGGAGGGTTTGTATTGGA+TGG + chr2.1:15514769-15514788 None:intergenic 40.0%
TTGATCGAAGACCATTAGAG+GGG - chr2.1:15515288-15515307 MS.gene35429:intron 40.0%
! ATCGTGTTTGAGGTTTGCAT+CGG - chr2.1:15514871-15514890 MS.gene35429:intron 40.0%
! TCAAGTTGTAACTCCGTCTT+TGG + chr2.1:15515314-15515333 None:intergenic 40.0%
! TCCTTTTTGGATCGTGTTTG+AGG - chr2.1:15514861-15514880 MS.gene35429:intron 40.0%
!! TTGTGGGTATTGGAAAGCTA+CGG - chr2.1:15514603-15514622 MS.gene35429:CDS 40.0%
!!! GGGCCCCAATTTTTTTTTAG+GGG - chr2.1:15514227-15514246 MS.gene35429:intron 40.0%
AGACAAGAGAGAGAGTTGAG+TGG - chr2.1:15514556-15514575 MS.gene35429:CDS 45.0%
AGTTGTTCCCATTCCCAAAG+AGG + chr2.1:15515515-15515534 None:intergenic 45.0%
CCAAATTGTAGGTTCGTCCT+AGG - chr2.1:15514378-15514397 MS.gene35429:CDS 45.0%
CCTACAGAAGAAGAGCTAGT+TGG - chr2.1:15513639-15513658 MS.gene35429:CDS 45.0%
CCTAGGACGAACCTACAATT+TGG + chr2.1:15514381-15514400 None:intergenic 45.0%
CTCAACTCTCTCTCTTGTCT+TGG + chr2.1:15514556-15514575 None:intergenic 45.0%
CTTCTATCTACACAACCAGC+TGG - chr2.1:15513662-15513681 MS.gene35429:CDS 45.0%
GGATAGAAACGAAAACCAGG+TGG + chr2.1:15513621-15513640 None:intergenic 45.0%
GGATGGATCAGATGGTTCAA+TGG + chr2.1:15514752-15514771 None:intergenic 45.0%
GGCCACCAAAATCTCAGAAA+CGG - chr2.1:15514399-15514418 MS.gene35429:CDS 45.0%
TACGTACTTGGAAGGTTCCA+TGG + chr2.1:15513750-15513769 None:intergenic 45.0%
TAGGAAAAGCTCCATCTGGA+AGG - chr2.1:15514695-15514714 MS.gene35429:intron 45.0%
TATATGAGGCAGAGCGAAGA+GGG - chr2.1:15514167-15514186 MS.gene35429:intron 45.0%
TATCTACACAACCAGCTGGA+AGG - chr2.1:15513666-15513685 MS.gene35429:CDS 45.0%
! CCAACTAGCTCTTCTTCTGT+AGG + chr2.1:15513642-15513661 None:intergenic 45.0%
!! TGTGGGTATTGGAAAGCTAC+GGG - chr2.1:15514604-15514623 MS.gene35429:CDS 45.0%
!!! TTCTGAGATTTTGGTGGCCT+AGG + chr2.1:15514398-15514417 None:intergenic 45.0%
!!! AATTTATGATAAATATTTTA+AGG + chr2.1:15514951-15514970 None:intergenic 5.0%
ACCATTAGAGGGGCCAAAGA+CGG - chr2.1:15515298-15515317 MS.gene35429:intron 50.0%
ATGAACCTGACGAGCCTCTT+TGG - chr2.1:15515498-15515517 MS.gene35429:CDS 50.0%
CAAGAGAGAGAGTTGAGTGG+TGG - chr2.1:15514559-15514578 MS.gene35429:CDS 50.0%
GTATATGAGGCAGAGCGAAG+AGG - chr2.1:15514166-15514185 MS.gene35429:intron 50.0%
TGAACCTGACGAGCCTCTTT+GGG - chr2.1:15515499-15515518 MS.gene35429:CDS 50.0%
! CATGCTTTTGTCCTTCCAGC+TGG + chr2.1:15513680-15513699 None:intergenic 50.0%
! TGACGAGCCTCTTTGGGAAT+GGG - chr2.1:15515505-15515524 MS.gene35429:CDS 50.0%
!!! AGGGGCCGTTTCTGAGATTT+TGG + chr2.1:15514407-15514426 None:intergenic 50.0%
!!! GGCCGTTTCTGAGATTTTGG+TGG + chr2.1:15514404-15514423 None:intergenic 50.0%
ATCAACTTCCCACTCGGGAG+AGG - chr2.1:15515394-15515413 MS.gene35429:CDS 55.0%
CAAGTGGTAGCAGAGCTCGA+TGG - chr2.1:15515362-15515381 MS.gene35429:intron 55.0%
CATTCCCAAAGAGGCTCGTC+AGG + chr2.1:15515506-15515525 None:intergenic 55.0%
GAGGGTCAAGTGGCACGAAT+TGG - chr2.1:15515450-15515469 MS.gene35429:CDS 55.0%
GTCGTGGAGACACAGAGCAA+TGG - chr2.1:15514518-15514537 MS.gene35429:CDS 55.0%
TCCGTCTTTGGCCCCTCTAA+TGG + chr2.1:15515302-15515321 None:intergenic 55.0%
TTTGCAGGGGAGAGATGTCG+TGG - chr2.1:15514502-15514521 MS.gene35429:CDS 55.0%
! CTGACGAGCCTCTTTGGGAA+TGG - chr2.1:15515504-15515523 MS.gene35429:CDS 55.0%
ACTTCCCACTCGGGAGAGGT+AGG - chr2.1:15515398-15515417 MS.gene35429:CDS 60.0%
CTTCCCACTCGGGAGAGGTA+GGG - chr2.1:15515399-15515418 MS.gene35429:CDS 60.0%
TCTCCCTACCTCTCCCGAGT+GGG + chr2.1:15515405-15515424 None:intergenic 60.0%
CTCTCCCTACCTCTCCCGAG+TGG + chr2.1:15515406-15515425 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 15513606 15515547 15513606 ID=MS.gene35429
chr2.1 mRNA 15513606 15515547 15513606 ID=MS.gene35429.t1;Parent=MS.gene35429
chr2.1 exon 15515391 15515547 15515391 ID=MS.gene35429.t1.exon1;Parent=MS.gene35429.t1
chr2.1 CDS 15515391 15515547 15515391 ID=cds.MS.gene35429.t1;Parent=MS.gene35429.t1
chr2.1 exon 15514364 15514653 15514364 ID=MS.gene35429.t1.exon2;Parent=MS.gene35429.t1
chr2.1 CDS 15514364 15514653 15514364 ID=cds.MS.gene35429.t1;Parent=MS.gene35429.t1
chr2.1 exon 15513606 15513923 15513606 ID=MS.gene35429.t1.exon3;Parent=MS.gene35429.t1
chr2.1 CDS 15513606 15513923 15513606 ID=cds.MS.gene35429.t1;Parent=MS.gene35429.t1
Gene Sequence

>MS.gene35429

ATGGAGGATTCCCCACCTGGTTTTCGTTTCTATCCTACAGAAGAAGAGCTAGTTGGCTTCTATCTACACAACCAGCTGGAAGGACAAAAGCATGAAGACATAAACAAAATCATACCTGTCATTGATATCAATGGCAAAGAGCCATGGAACCTTCCAAGTACGTAACACAATTTTTTTACGTGACTCATTCATTTCTTCATGATATATATCACTTTTATAATTTTGATTGTCTCAAAATAATTCTCATTCAAAATATACTTCAATATCTCACAACACTAGAAATATAAAATTAGCCATGAAGAAAAAAATTATCTCAAATTCTCCCGTTACTTAATCTAGTGATTTTATATTTGACATGCATACTCTATCGTTTTTTTTTTTTTTTGAGGGAACATGCATACTCTATCTATAAGTAGTGTCATGGTAAGTTAATATTTTTCATATACTATCAGAAAAAAGTTAATATTTTTCATAGATTCCCTAATGGGCCTAAATATGTCTAAGATTGACACCGTCATTCATGTAGATATTTTCTATGATATTATACCACATGTAGGGTTGTATATGAGGCAGAGCGAAGAGGGCGACCGTCCTATACCCCAAAAAATAAGTACGAAATTTGGGCCCCAATTTTTTTTTAGGGGTTTATTAGGCCCTAAAAAAATTGCTTAGTTTTTTATATCAAATTTTATGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGTTAGAACCCAAATTGTAGGTTCGTCCTAGGCCACCAAAATCTCAGAAACGGCCCCTGAACACATGTGAGAGTAATATCTTACTAAAATATGATCGATGACAATGTAAATAAACTCTTGCTTGTAATCAGCATTTGCAGGGGAGAGATGTCGTGGAGACACAGAGCAATGGTTTTTCTTTTCACCAAGACAAGAGAGAGAGTTGAGTGGTGGAAGACCAAACAGAACAACATCTTGTGGGTATTGGAAAGCTACGGGTTCTCCTAGCTACGTTTACTCTTCTAACAACAAAGTTATTGGAATAAGGAAAACCATGGTGTTTTACATAGGAAAAGCTCCATCTGGAAGGAAAACAAAATGGAAGATGCATGAATATAAAGCCATTGAACCATCTGATCCATCCAATACAAACCCTCCTAAGGTATATTTGAAAAAGTAAAACTCGTCAGCATGATTAATATCAATCATGCTAATGAGTTCTTATTTTTCCCTTCCTTTTTGGATCGTGTTTGAGGTTTGCATCGGTTATGTTTGACCGTGATTCTCAAATAATATGTCACATATTGTAGTGTGATTCCACCTTAAAATATTTATCATAAATTTATAAACTTAAAAAGAGATCCATGACAACAATCAAGATTGTGACGTCATAATTTCAAAAATTTGTGTCTACAATGATACTAAATGCGATTAAAGTCATATTGATCATATTTGAATGTGATTTTATACAATATACAATAAATTTTGACGCGGTCTTAATATGATCACGATATAAAATCGTAGTCATAAATTCACATGTTATCATAATCTTAATTTTTTTAATTTTTTAATTGATCAATAATTTATTTTGGTGTGTTGTAGCTGCGACACGAAATCAGCTTGTGTCGCGTTTATGTGATATCGGGAAGCTTTAGTTCATTTGATCGAAGACCATTAGAGGGGCCAAAGACGGAGTTACAACTTGATCATGTTGCTTCAACAAGTGCTCATCAACAAGTGGTAGCAGAGCTCGATGGATCAAACTTATCAACTTCCCACTCGGGAGAGGTAGGGAGAGACCCTGATGCTGCTCTTAATATTGGAGGGTCAAGTGGCACGAATTGGAATGATGTACCAAATAATGGGGTTGATGAACCTGACGAGCCTCTTTGGGAATGGGAACAACTAAATTGGATCTAA
Protein sequence

>MS.gene35429.t1

MEDSPPGFRFYPTEEELVGFYLHNQLEGQKHEDINKIIPVIDINGKEPWNLPTFAGERCRGDTEQWFFFSPRQERELSGGRPNRTTSCGYWKATGSPSYVYSSNNKVIGIRKTMVFYIGKAPSGRKTKWKMHEYKAIEPSDPSNTNPPKLRHEISLCRVYVISGSFSSFDRRPLEGPKTELQLDHVASTSAHQQVVAELDGSNLSTSHSGEVGRDPDAALNIGGSSGTNWNDVPNNGVDEPDEPLWEWEQLNWI