AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35705

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35705.t1 MTR_2g088000 93.790 467 14 2 1 453 137 602 0.0 888
MS.gene35705.t1 MTR_4g132430 55.263 418 154 13 1 409 80 473 2.67e-123 368
MS.gene35705.t1 MTR_2g023930 51.584 442 156 14 5 410 114 533 3.05e-115 349
MS.gene35705.t1 MTR_4g047580 44.979 478 215 10 4 441 69 538 4.40e-113 343
MS.gene35705.t1 MTR_4g049760 47.134 471 204 10 4 445 77 531 2.05e-112 342
MS.gene35705.t1 MTR_4g049790 45.598 443 186 10 4 414 101 520 1.68e-110 337
MS.gene35705.t1 MTR_4g132430 56.474 363 127 11 54 409 1 339 2.62e-109 327
MS.gene35705.t1 MTR_3g053330 43.437 419 184 13 1 406 66 444 2.08e-94 293
MS.gene35705.t1 MTR_7g110720 39.318 440 167 16 1 432 73 420 9.77e-77 246
MS.gene35705.t1 MTR_7g110720 38.864 440 142 16 1 432 73 393 1.74e-74 239
MS.gene35705.t1 MTR_2g045360 35.013 397 182 11 31 405 66 408 2.75e-56 192
MS.gene35705.t1 MTR_7g009730 30.913 482 218 19 38 431 45 499 7.99e-47 170
MS.gene35705.t1 MTR_4g094412 42.748 262 124 7 184 420 227 487 1.71e-43 159
MS.gene35705.t1 MTR_4g094412 42.748 262 124 7 184 420 218 478 1.86e-43 159
MS.gene35705.t1 MTR_4g107970 35.917 387 166 12 23 344 60 429 3.06e-39 149
MS.gene35705.t1 MTR_4g107970 38.189 254 107 7 41 260 1 238 4.48e-38 145
MS.gene35705.t1 MTR_6g038890 53.103 145 50 7 86 230 92 218 7.04e-33 124
MS.gene35705.t1 MTR_5g044695 84.615 65 7 1 166 230 46 107 1.03e-31 117
MS.gene35705.t1 MTR_4g007060 30.263 228 102 7 177 403 105 276 1.25e-26 108
MS.gene35705.t1 MTR_4g007060 31.140 228 100 8 177 403 139 310 1.28e-26 109
MS.gene35705.t1 MTR_5g094430 44.628 121 56 3 152 262 172 291 2.16e-25 107
MS.gene35705.t1 MTR_5g094430 44.628 121 56 3 152 262 194 313 2.24e-25 108
MS.gene35705.t1 MTR_5g094430 44.628 121 56 3 152 262 306 425 5.77e-25 107
MS.gene35705.t1 MTR_3g056100 37.736 159 86 4 115 262 163 319 1.15e-24 106
MS.gene35705.t1 MTR_3g056100 37.736 159 86 4 115 262 307 463 1.28e-24 107
MS.gene35705.t1 MTR_3g031220 54.430 79 35 1 182 260 347 424 1.80e-24 106
MS.gene35705.t1 MTR_3g031220 47.619 63 31 2 200 262 198 258 3.19e-11 65.9
MS.gene35705.t1 MTR_3g009470 38.621 145 86 2 118 262 415 556 2.22e-24 106
MS.gene35705.t1 MTR_3g009470 42.683 82 44 3 201 281 281 360 6.39e-13 71.2
MS.gene35705.t1 MTR_3g056100 55.000 80 35 1 183 262 398 476 4.23e-24 105
MS.gene35705.t1 MTR_3g056100 55.000 80 35 1 183 262 254 332 4.33e-24 104
MS.gene35705.t1 MTR_1g013760 48.889 90 46 0 185 274 125 214 7.67e-24 101
MS.gene35705.t1 MTR_7g011820 48.454 97 49 1 176 272 386 481 1.08e-23 103
MS.gene35705.t1 MTR_7g011820 52.459 61 27 2 200 260 228 286 4.85e-13 71.2
MS.gene35705.t1 MTR_1g013790 56.061 66 29 0 195 260 96 161 1.18e-23 100
MS.gene35705.t1 MTR_5g097490 51.724 87 41 1 174 260 226 311 1.20e-23 102
MS.gene35705.t1 MTR_3g106060 54.054 74 34 0 185 258 123 196 1.54e-23 100
MS.gene35705.t1 MTR_5g074400 52.381 84 39 1 179 262 399 481 2.54e-23 103
MS.gene35705.t1 MTR_5g074400 35.398 113 61 4 148 260 201 301 1.62e-11 66.6
MS.gene35705.t1 MTR_4g122530 51.948 77 36 1 184 260 192 267 3.09e-23 101
MS.gene35705.t1 MTR_4g013260 53.165 79 36 1 182 260 318 395 3.63e-23 102
MS.gene35705.t1 MTR_4g013260 40.000 75 42 2 186 260 172 243 7.54e-12 67.8
MS.gene35705.t1 MTR_7g071120 53.571 84 38 1 179 262 303 385 4.38e-23 102
MS.gene35705.t1 MTR_7g109800 46.739 92 42 2 184 275 129 213 1.29e-22 97.8
MS.gene35705.t1 MTR_5g042920 50.617 81 39 1 182 262 302 381 2.85e-22 99.0
MS.gene35705.t1 MTR_5g042920 49.180 61 29 2 200 260 151 209 4.07e-12 68.2
MS.gene35705.t1 MTR_5g043880 47.126 87 45 1 171 257 95 180 4.72e-22 95.9
MS.gene35705.t1 MTR_7g080020 51.250 80 38 1 183 262 476 554 8.92e-22 99.0
MS.gene35705.t1 MTR_7g080020 50.000 60 28 2 201 260 281 338 2.02e-11 66.6
MS.gene35705.t1 MTR_3g104750 46.914 81 42 1 177 257 81 160 9.88e-22 92.0
MS.gene35705.t1 MTR_2g033820 49.351 77 38 1 184 260 187 262 1.07e-21 96.7
MS.gene35705.t1 MTR_7g080000 51.250 80 38 1 183 262 415 493 1.22e-21 98.6
MS.gene35705.t1 MTR_7g080000 47.692 65 32 2 196 260 230 292 1.56e-11 67.0
MS.gene35705.t1 MTR_4g082580 47.619 84 43 1 179 262 257 339 1.66e-21 96.3
MS.gene35705.t1 MTR_4g082580 41.463 82 43 3 200 280 145 222 1.48e-11 66.2
MS.gene35705.t1 MTR_1g015140 50.685 73 35 1 185 257 87 158 3.11e-21 90.5
MS.gene35705.t1 MTR_1g086790 40.000 115 65 2 184 295 142 255 1.06e-20 93.2
MS.gene35705.t1 MTR_7g028415 50.704 71 34 1 189 259 82 151 1.13e-20 89.4
MS.gene35705.t1 MTR_7g028710 50.704 71 34 1 189 259 82 151 1.13e-20 89.4
MS.gene35705.t1 MTR_2g105060 30.085 236 87 9 178 403 142 309 1.65e-20 92.4
MS.gene35705.t1 MTR_2g105060 30.085 236 87 9 178 403 67 234 1.81e-20 90.5
MS.gene35705.t1 MTR_4g094588 51.351 74 35 1 187 260 165 237 3.31e-20 91.7
MS.gene35705.t1 MTR_1g009613 47.561 82 43 0 184 265 246 327 4.86e-20 91.3
MS.gene35705.t1 MTR_3g095080 46.067 89 46 2 183 271 127 213 6.07e-20 88.6
MS.gene35705.t1 MTR_3g095080 46.067 89 46 2 183 271 151 237 6.64e-20 89.0
MS.gene35705.t1 MTR_4g130900 50.649 77 37 1 184 260 343 418 2.77e-19 90.5
MS.gene35705.t1 MTR_7g100510 43.529 85 47 1 176 260 337 420 2.94e-19 90.1
MS.gene35705.t1 MTR_7g100510 50.000 60 28 2 201 260 190 247 7.45e-12 67.4
MS.gene35705.t1 MTR_8g092140 45.556 90 46 3 183 271 142 229 3.07e-19 87.0
MS.gene35705.t1 MTR_7g079010 46.250 80 42 1 178 257 119 197 3.36e-19 86.3
MS.gene35705.t1 MTR_8g096730 40.659 91 53 1 173 263 43 132 4.04e-19 84.3
MS.gene35705.t1 MTR_8g087000 54.930 71 31 1 191 260 67 137 8.26e-19 85.9
MS.gene35705.t1 MTR_5g091390 48.649 74 37 1 187 260 144 216 8.53e-19 87.0
MS.gene35705.t1 MTR_8g087000 54.930 71 31 1 191 260 66 136 9.11e-19 85.9
MS.gene35705.t1 MTR_8g007270 47.368 76 39 1 183 258 137 211 1.34e-18 85.1
MS.gene35705.t1 MTR_4g094908 46.835 79 42 0 184 262 250 328 2.33e-18 86.3
MS.gene35705.t1 MTR_2g083870 40.833 120 52 4 141 260 40 140 2.50e-18 85.1
MS.gene35705.t1 MTR_1g070455 47.436 78 41 0 184 261 277 354 2.59e-18 86.7
MS.gene35705.t1 MTR_8g092010 44.595 74 40 1 187 260 95 167 3.26e-18 82.8
MS.gene35705.t1 MTR_5g016610 37.607 117 70 2 146 259 142 258 3.26e-18 84.7
MS.gene35705.t1 MTR_2g016770 54.839 62 28 0 200 261 35 96 4.72e-18 83.2
MS.gene35705.t1 MTR_2g016770 54.839 62 28 0 200 261 27 88 6.45e-18 82.4
MS.gene35705.t1 MTR_4g127040 48.000 75 39 0 184 258 229 303 7.31e-18 84.7
MS.gene35705.t1 MTR_7g109600 38.384 99 55 1 170 262 17 115 1.22e-17 83.2
MS.gene35705.t1 MTR_2g024350 35.714 140 80 2 195 324 3 142 2.68e-17 81.3
MS.gene35705.t1 MTR_3g095040 45.946 74 39 1 187 260 105 177 3.81e-17 80.1
MS.gene35705.t1 MTR_3g108960 45.946 74 40 0 184 257 298 371 1.80e-16 81.3
MS.gene35705.t1 MTR_2g024380 44.156 77 43 0 195 271 246 322 5.12e-16 80.5
MS.gene35705.t1 MTR_7g062220 35.065 154 77 3 130 261 32 184 5.33e-16 79.0
MS.gene35705.t1 MTR_1g077780 44.304 79 43 1 184 262 46 123 6.27e-16 75.1
MS.gene35705.t1 MTR_0117s0040 47.887 71 37 0 187 257 61 131 1.37e-15 76.6
MS.gene35705.t1 MTR_1g099600 40.426 94 54 1 197 290 182 273 2.06e-15 77.4
MS.gene35705.t1 MTR_2g032030 51.667 60 29 0 201 260 268 327 3.33e-15 78.2
MS.gene35705.t1 MTR_8g028565 50.000 64 32 0 197 260 152 215 3.78e-15 76.6
MS.gene35705.t1 MTR_2g032030 50.820 61 30 0 200 260 267 327 5.31e-15 77.0
MS.gene35705.t1 MTR_7g079040 42.683 82 35 1 191 260 133 214 1.18e-14 75.1
MS.gene35705.t1 MTR_6g086555 48.000 75 37 2 187 260 193 266 1.50e-14 75.5
MS.gene35705.t1 MTR_4g007060 44.262 61 34 0 177 237 139 199 4.35e-14 72.0
MS.gene35705.t1 MTR_3g090860 48.684 76 32 2 187 255 115 190 6.16e-14 73.2
MS.gene35705.t1 MTR_1g078260 42.466 73 40 2 187 258 234 305 7.35e-14 73.9
MS.gene35705.t1 MTR_3g009470 42.683 82 44 3 201 281 281 360 2.18e-13 72.4
MS.gene35705.t1 MTR_8g098945 45.161 62 34 0 199 260 128 189 6.57e-13 69.3
MS.gene35705.t1 MTR_7g073380 34.579 107 67 2 176 279 98 204 6.86e-13 69.3
MS.gene35705.t1 MTR_7g073430 36.449 107 65 2 176 279 97 203 1.20e-12 68.6
MS.gene35705.t1 MTR_8g027860 36.207 116 56 4 158 255 78 193 1.21e-12 69.3
MS.gene35705.t1 MTR_5g067680 53.448 58 25 1 201 256 203 260 2.13e-12 68.6
MS.gene35705.t1 MTR_2g075680 40.541 74 42 1 184 255 132 205 1.08e-11 65.9
MS.gene35705.t1 MTR_3g031220 47.619 63 31 2 200 262 198 258 1.52e-11 66.2
MS.gene35705.t1 MTR_5g097500 36.782 87 54 1 174 260 204 289 4.07e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35705.t1 AT1G62300 50.333 451 174 11 1 422 123 552 4.12e-120 362
MS.gene35705.t1 AT4G04450 49.074 432 182 11 3 406 82 503 9.49e-107 327
MS.gene35705.t1 AT4G04450 48.449 419 178 11 16 406 1 409 1.91e-101 310
MS.gene35705.t1 AT4G22070 49.558 452 163 13 3 406 80 514 1.25e-99 308
MS.gene35705.t1 AT4G22070 49.558 452 163 13 3 406 80 514 1.25e-99 308
MS.gene35705.t1 AT4G22070 49.558 452 163 13 3 406 80 514 1.25e-99 308
MS.gene35705.t1 AT4G22070 49.558 452 163 13 3 406 80 514 1.25e-99 308
MS.gene35705.t1 AT4G01720 40.441 408 166 12 22 403 87 443 5.81e-70 230
MS.gene35705.t1 AT5G15130 33.107 441 220 15 33 408 35 465 5.07e-49 176
MS.gene35705.t1 AT1G68150 40.000 260 121 7 37 293 97 324 2.68e-48 170
MS.gene35705.t1 AT5G15130 42.308 260 112 8 183 408 168 423 1.48e-47 171
MS.gene35705.t1 AT1G18860 37.748 302 122 6 183 419 222 522 4.61e-43 159
MS.gene35705.t1 AT1G69810 34.579 321 181 9 33 335 25 334 5.00e-40 148
MS.gene35705.t1 AT1G69810 43.284 201 103 5 141 335 81 276 2.06e-38 142
MS.gene35705.t1 AT2G38470 44.628 121 65 2 182 302 344 462 2.77e-26 111
MS.gene35705.t1 AT2G38470 45.205 73 37 3 188 260 173 242 2.99e-11 65.9
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 129 264 6.94e-25 105
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 129 264 6.94e-25 105
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 129 264 6.94e-25 105
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 129 264 6.94e-25 105
MS.gene35705.t1 AT1G80840 30.603 232 98 7 177 403 118 291 9.32e-25 104
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 265 400 1.09e-24 107
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 233 368 1.25e-24 106
MS.gene35705.t1 AT4G26640 43.796 137 65 5 135 260 305 440 1.59e-24 106
MS.gene35705.t1 AT2G04880 47.674 86 44 1 179 264 262 346 1.31e-23 103
MS.gene35705.t1 AT2G04880 33.103 145 84 5 188 324 92 231 3.08e-11 65.5
MS.gene35705.t1 AT2G04880 47.674 86 44 1 179 264 286 370 1.93e-23 103
MS.gene35705.t1 AT2G04880 40.964 83 40 3 188 263 92 172 6.18e-11 64.7
MS.gene35705.t1 AT1G13960 53.165 79 36 1 182 260 391 468 3.88e-23 102
MS.gene35705.t1 AT1G13960 49.180 61 29 2 200 260 229 287 2.14e-12 69.3
MS.gene35705.t1 AT5G07100 41.176 102 59 1 159 260 100 200 4.93e-23 97.4
MS.gene35705.t1 AT5G07100 41.176 102 59 1 159 260 100 200 4.93e-23 97.4
MS.gene35705.t1 AT5G07100 41.176 102 59 1 159 260 100 200 4.93e-23 97.4
MS.gene35705.t1 AT5G07100 41.176 102 59 1 159 260 100 200 4.93e-23 97.4
MS.gene35705.t1 AT1G13960 53.165 79 36 1 182 260 238 315 5.12e-23 100
MS.gene35705.t1 AT1G13960 49.180 61 29 2 200 260 76 134 4.50e-12 67.8
MS.gene35705.t1 AT1G29860 39.706 136 71 4 184 309 120 254 7.35e-23 98.6
MS.gene35705.t1 AT5G07100 49.398 83 41 1 178 260 212 293 7.52e-23 99.0
MS.gene35705.t1 AT5G56270 53.750 80 36 1 183 262 470 548 9.92e-23 101
MS.gene35705.t1 AT5G56270 49.180 61 29 2 201 261 274 332 3.47e-11 65.9
MS.gene35705.t1 AT5G26170 50.685 73 35 1 186 258 99 170 1.60e-22 94.7
MS.gene35705.t1 AT4G31800 58.462 65 27 0 199 263 110 174 1.71e-22 96.7
MS.gene35705.t1 AT4G31800 58.462 65 27 0 199 263 175 239 1.81e-22 97.8
MS.gene35705.t1 AT2G25000 42.708 96 55 0 169 264 72 167 1.96e-22 95.9
MS.gene35705.t1 AT2G25000 42.708 96 55 0 169 264 72 167 1.96e-22 95.9
MS.gene35705.t1 AT5G49520 49.351 77 38 1 184 260 205 280 1.99e-22 99.4
MS.gene35705.t1 AT2G25000 42.708 96 55 0 169 264 94 189 2.11e-22 96.3
MS.gene35705.t1 AT2G25000 42.708 96 55 0 169 264 115 210 3.28e-22 96.3
MS.gene35705.t1 AT2G03340 48.276 87 44 1 176 262 391 476 5.55e-22 99.0
MS.gene35705.t1 AT2G03340 49.180 61 29 2 200 260 250 308 1.14e-12 70.1
MS.gene35705.t1 AT4G18170 51.948 77 36 1 184 260 156 231 2.32e-21 94.7
MS.gene35705.t1 AT1G69310 42.157 102 55 2 159 257 103 203 3.71e-21 93.6
MS.gene35705.t1 AT1G69310 42.157 102 55 2 159 257 103 203 3.71e-21 93.6
MS.gene35705.t1 AT1G69310 42.157 102 55 2 159 257 103 203 3.71e-21 93.6
MS.gene35705.t1 AT3G01080 46.512 86 45 1 175 260 319 403 5.49e-21 95.5
MS.gene35705.t1 AT3G01080 46.512 86 45 1 175 260 281 365 6.30e-21 95.1
MS.gene35705.t1 AT2G47260 50.649 77 37 1 184 260 158 233 8.79e-21 93.6
MS.gene35705.t1 AT4G26440 37.209 129 78 2 134 262 308 433 1.20e-20 95.1
MS.gene35705.t1 AT4G26440 50.000 62 29 2 200 261 178 237 7.05e-13 71.2
MS.gene35705.t1 AT3G01970 51.351 74 35 1 186 259 51 123 1.73e-20 88.2
MS.gene35705.t1 AT2G30250 50.000 80 39 1 183 262 311 389 1.93e-20 93.2
MS.gene35705.t1 AT5G41570 50.000 82 39 2 177 257 74 154 4.91e-20 87.8
MS.gene35705.t1 AT1G64000 41.748 103 55 2 175 277 89 186 6.14e-20 87.8
MS.gene35705.t1 AT5G46350 50.000 74 36 1 187 260 170 242 6.41e-20 90.9
MS.gene35705.t1 AT5G13080 50.685 73 35 1 187 259 54 125 1.68e-19 85.1
MS.gene35705.t1 AT4G39410 44.444 81 44 1 178 258 201 280 1.78e-19 89.0
MS.gene35705.t1 AT1G55600 43.820 89 49 1 174 262 281 368 2.59e-19 90.5
MS.gene35705.t1 AT4G30935 50.649 77 37 1 184 260 315 390 3.10e-19 90.5
MS.gene35705.t1 AT2G46130 48.718 78 39 1 180 257 10 86 4.82e-19 82.8
MS.gene35705.t1 AT2G23320 57.627 59 25 0 201 259 241 299 8.34e-19 87.4
MS.gene35705.t1 AT4G24240 50.000 76 38 0 184 259 265 340 1.10e-18 87.4
MS.gene35705.t1 AT3G62340 50.000 78 38 1 187 264 105 181 2.10e-18 85.5
MS.gene35705.t1 AT2G30590 48.352 91 40 3 181 264 288 378 2.35e-18 87.0
MS.gene35705.t1 AT2G44745 46.667 75 39 1 183 257 128 201 2.37e-18 84.0
MS.gene35705.t1 AT5G28650 49.383 81 35 2 184 258 240 320 2.47e-18 86.3
MS.gene35705.t1 AT2G24570 50.000 74 37 0 184 257 227 300 2.86e-18 85.9
MS.gene35705.t1 AT5G64810 47.887 71 36 1 187 257 97 166 4.65e-18 82.4
MS.gene35705.t1 AT4G31550 48.649 74 38 0 184 257 230 303 6.60e-18 84.7
MS.gene35705.t1 AT4G31550 48.649 74 38 0 184 257 229 302 7.44e-18 84.7
MS.gene35705.t1 AT3G58710 36.220 127 72 3 137 260 10 130 7.55e-18 84.0
MS.gene35705.t1 AT3G58710 35.938 128 72 3 137 260 10 131 1.05e-17 83.6
MS.gene35705.t1 AT1G29280 47.143 70 37 0 191 260 65 134 1.09e-17 83.2
MS.gene35705.t1 AT3G04670 48.148 81 36 2 184 258 240 320 1.61e-17 84.0
MS.gene35705.t1 AT2G37260 49.333 75 34 2 195 266 264 337 7.91e-17 82.0
MS.gene35705.t1 AT2G37260 48.438 64 31 2 201 264 86 147 2.48e-13 71.6
MS.gene35705.t1 AT2G37260 49.333 75 34 2 195 266 262 335 7.98e-17 82.0
MS.gene35705.t1 AT2G37260 48.438 64 31 2 201 264 84 145 2.47e-13 71.6
MS.gene35705.t1 AT2G37260 49.333 75 34 2 195 266 344 417 1.19e-16 82.4
MS.gene35705.t1 AT2G37260 51.667 60 27 2 201 260 166 223 3.02e-13 71.6
MS.gene35705.t1 AT1G69310 39.216 102 54 3 159 257 103 199 4.17e-16 79.0
MS.gene35705.t1 AT4G01250 37.143 105 53 1 200 291 128 232 4.73e-16 79.0
MS.gene35705.t1 AT5G52830 50.746 67 33 0 194 260 159 225 5.04e-16 79.7
MS.gene35705.t1 AT4G23550 48.485 66 34 0 195 260 135 200 9.46e-16 78.2
MS.gene35705.t1 AT2G34830 44.737 76 41 1 186 260 200 275 2.07e-15 78.6
MS.gene35705.t1 AT1G30650 44.737 76 41 1 186 260 202 277 2.51e-15 78.2
MS.gene35705.t1 AT2G34830 44.737 76 41 1 186 260 209 284 2.80e-15 78.2
MS.gene35705.t1 AT5G43290 41.772 79 44 2 187 264 100 177 6.50e-15 75.1
MS.gene35705.t1 AT2G46130 44.872 78 38 2 180 257 10 82 5.30e-14 68.6
MS.gene35705.t1 AT4G31800 61.538 39 15 0 199 237 175 213 1.63e-12 67.4
MS.gene35705.t1 AT2G46400 41.772 79 44 1 179 255 83 161 1.99e-12 68.2
MS.gene35705.t1 AT2G21900 40.909 66 38 1 195 260 104 168 4.67e-12 65.5
MS.gene35705.t1 AT5G45050 47.541 61 32 0 200 260 1180 1240 5.93e-12 68.6
MS.gene35705.t1 AT5G45050 47.541 61 32 0 200 260 1152 1212 6.17e-12 68.6
MS.gene35705.t1 AT5G45050 47.541 61 32 0 200 260 1041 1101 6.48e-12 68.6
MS.gene35705.t1 AT3G01080 49.180 61 29 2 200 260 205 263 1.90e-11 65.5

Find 95 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTCCAAGACAATTTA+TGG 0.128951 2.1:+13787945 MS.gene35705:CDS
ATTGCTCTTGTGAGGTAATT+TGG 0.146915 2.1:-13790388 None:intergenic
TTTGACTGATCTTGACTTCT+TGG 0.186141 2.1:-13788009 None:intergenic
GGTTATTAGGGAACTGGTTT+TGG 0.212904 2.1:-13790495 None:intergenic
CTGCTATTACTTCAATTATT+GGG 0.212910 2.1:+13790716 MS.gene35705:CDS
GCTGCTATTACTTCAATTAT+TGG 0.268652 2.1:+13790715 MS.gene35705:CDS
CTTGATGAGGAGAAACAAAA+TGG 0.281238 2.1:+13787910 MS.gene35705:CDS
AAATGGGAATGGTGGAGTTT+TGG 0.297182 2.1:+13787927 MS.gene35705:CDS
TTGCTCTTGTGAGGTAATTT+GGG 0.310844 2.1:-13790387 None:intergenic
CTAGTACCGTTATTATTGTT+TGG 0.316751 2.1:-13790748 None:intergenic
TTTGGTTTGGTGACTGAGTT+AGG 0.325584 2.1:-13790477 None:intergenic
AGGGAAATTGGAACTGGTTA+GGG 0.327267 2.1:-13790519 None:intergenic
ACATGCTTGATGAGGGTAAT+AGG 0.328005 2.1:+13787791 MS.gene35705:CDS
TTATCGATGCACCATGGCCT+TGG 0.349834 2.1:+13788429 MS.gene35705:CDS
GTTGCTATGCTTGAAGAATA+AGG 0.353526 2.1:-13790415 None:intergenic
AATAACGGTACTAGCAATAA+TGG 0.353919 2.1:+13790757 MS.gene35705:CDS
GGGAAATTGGAACTGGTTAG+GGG 0.369219 2.1:-13790518 None:intergenic
CCAAGACAATTTATGGAGCT+TGG 0.403211 2.1:+13787952 MS.gene35705:CDS
AAGGGAAATTGGAACTGGTT+AGG 0.406882 2.1:-13790520 None:intergenic
GGATGTCAATGGAGAAAGTA+TGG 0.409848 2.1:+13788367 MS.gene35705:CDS
TCCTAACTTCACTGCAGCTT+TGG 0.414246 2.1:+13790690 MS.gene35705:CDS
TGCTATGTCTTCCTCCATCA+TGG 0.419633 2.1:-13787574 None:intergenic
TATCGATGCACCATGGCCTT+GGG 0.424967 2.1:+13788430 MS.gene35705:CDS
GAAATTGGAACTGGTTAGGG+GGG 0.429542 2.1:-13790516 None:intergenic
GAGGGAAGGGAAATTGGAAC+TGG 0.429543 2.1:-13790525 None:intergenic
TGTACCATTTCCATAGCTGC+TGG 0.431979 2.1:-13790298 None:intergenic
TGCTTTGCCTCCAGCAGCTA+TGG 0.435611 2.1:+13790288 MS.gene35705:CDS
GCTTGTTCAACATTTGTTTG+AGG 0.439934 2.1:-13788188 None:intergenic
AGTCCATCAGCACTTGTCAT+TGG 0.447523 2.1:-13790358 None:intergenic
GCCAAAGCTGCAGTGAAGTT+AGG 0.449086 2.1:-13790691 None:intergenic
TCCAATGTAACAGTTGGAAA+TGG 0.451153 2.1:-13790454 None:intergenic
AGACACAAGTTCTTCAACCT+TGG 0.451540 2.1:-13788061 None:intergenic
CGATAATAAGCTCGAGGACA+CGG 0.453138 2.1:-13788412 None:intergenic
ACAATAGCTAACAACACTAA+TGG 0.455086 2.1:+13790787 MS.gene35705:CDS
TCCATTTCCAACTGTTACAT+TGG 0.455513 2.1:+13790453 MS.gene35705:CDS
GCCTCCAGCAGCTATGGAAA+TGG 0.457149 2.1:+13790294 MS.gene35705:CDS
ACAATTTATGGAGCTTGGAT+TGG 0.459747 2.1:+13787957 MS.gene35705:CDS
TAGTTACTCTACTGAGGAGT+TGG 0.459750 2.1:-13790860 None:intergenic
GAAGAACAAAAGCAAGTGAT+TGG 0.463978 2.1:+13787880 MS.gene35705:CDS
GGAAATTGGAACTGGTTAGG+GGG 0.470023 2.1:-13790517 None:intergenic
CACCTTCATTCTCTCAAGCT+CGG 0.471926 2.1:-13787749 None:intergenic
CCAAGCTCCATAAATTGTCT+TGG 0.475471 2.1:-13787952 None:intergenic
AACCCTTGCTTTCCTCATAG+TGG 0.482051 2.1:-13788216 None:intergenic
GCAGATGCATTGGATGAGTA+TGG 0.482506 2.1:+13787828 MS.gene35705:CDS
TGCTATTACTTCAATTATTG+GGG 0.494301 2.1:+13790717 MS.gene35705:CDS
GCAGCTAAAACTCGATCTGC+AGG 0.523186 2.1:-13788131 None:intergenic
AGTTACTCTACTGAGGAGTT+GGG 0.523710 2.1:-13790859 None:intergenic
AGCTCGATCCGAGGCTAACA+TGG 0.526714 2.1:+13788247 MS.gene35705:CDS
ATACTTATCACAACATATGA+AGG 0.527047 2.1:+13790253 MS.gene35705:CDS
GATAATAAGCTCGAGGACAC+GGG 0.530098 2.1:-13788411 None:intergenic
GGGTTGTCCTGTGAGAAAAC+AGG 0.534363 2.1:+13788450 MS.gene35705:CDS
GGATTGATCATTGCTTGTGT+TGG 0.535532 2.1:-13787553 None:intergenic
ACAACACATTGCAGATGCAT+TGG 0.536029 2.1:+13787818 MS.gene35705:CDS
CATAATTTGCACAGGTACAA+AGG 0.536458 2.1:+13790212 MS.gene35705:intron
GAGAAAGTATGGACAGAAGA+TGG 0.537071 2.1:+13788378 MS.gene35705:CDS
GGACCAATGACAAGTGCTGA+TGG 0.540715 2.1:+13790355 MS.gene35705:CDS
GCTGCAAGAATGTTACTGTC+AGG 0.544674 2.1:+13790334 MS.gene35705:CDS
TTGATGAGGAGAAACAAAAT+GGG 0.547963 2.1:+13787911 MS.gene35705:CDS
GAGAAACAAAATGGGAATGG+TGG 0.550957 2.1:+13787919 MS.gene35705:CDS
GAACAAAAGCAAGTGATTGG+TGG 0.557254 2.1:+13787883 MS.gene35705:CDS
AGATCAATGATGGATGTCAA+TGG 0.557548 2.1:+13788356 MS.gene35705:intron
CTGAGGAACATGCTTGATGA+GGG 0.560805 2.1:+13787784 MS.gene35705:CDS
GAGTATGGTGCAAGACAAGA+AGG 0.561536 2.1:+13787843 MS.gene35705:CDS
GTTAGGTCCAATGTAACAGT+TGG 0.567146 2.1:-13790460 None:intergenic
CACAGGACAACCCAAGGCCA+TGG 0.568081 2.1:-13788440 None:intergenic
AGGCCACTATGAGGAAAGCA+AGG 0.570684 2.1:+13788213 MS.gene35705:CDS
ACATCAAGTAACAATACCAT+TGG 0.571515 2.1:+13790817 MS.gene35705:CDS
TAACAATGAGGAAGATTCCA+AGG 0.572334 2.1:+13788044 MS.gene35705:CDS
GCACAGCCAAACAATAATAA+CGG 0.583839 2.1:+13790742 MS.gene35705:CDS
AAGCAATGATCAATCCATGA+TGG 0.591359 2.1:+13787560 MS.gene35705:CDS
CTATGCTTGAAGAATAAGGA+AGG 0.594569 2.1:-13790411 None:intergenic
GGTGCAAGACAAGAAGGTAG+AGG 0.597094 2.1:+13787849 MS.gene35705:CDS
GAAGTGTACCATGTTAGCCT+CGG 0.600264 2.1:-13788255 None:intergenic
AACAAGCTGAGGCCACTATG+AGG 0.607043 2.1:+13788204 MS.gene35705:CDS
ACTGAGGAACATGCTTGATG+AGG 0.611969 2.1:+13787783 MS.gene35705:CDS
AGCCGAGCTTGAGAGAATGA+AGG 0.613065 2.1:+13787747 MS.gene35705:CDS
AACAAATGTTGAACAAGCTG+AGG 0.613373 2.1:+13788193 MS.gene35705:CDS
AAGGAAGGATTGCTCTTGTG+AGG 0.621106 2.1:-13790396 None:intergenic
TAGCATTAACTGTGTCAGCA+AGG 0.623284 2.1:-13790657 None:intergenic
CGAGCTTGAGAGAATGAAGG+TGG 0.635577 2.1:+13787750 MS.gene35705:CDS
ACCATTTCCATAGCTGCTGG+AGG 0.637423 2.1:-13790295 None:intergenic
GAGGAGAAACAAAATGGGAA+TGG 0.637776 2.1:+13787916 MS.gene35705:CDS
TATGGACAGAAGATGGCGAA+AGG 0.642826 2.1:+13788385 MS.gene35705:CDS
CAATGATCAATCCATGATGG+AGG 0.645307 2.1:+13787563 MS.gene35705:CDS
AGACAAAAGAGCTAAGCTTG+AGG 0.649723 2.1:+13787608 MS.gene35705:CDS
TTCAGTTAGAGCTCGATCCG+AGG 0.654330 2.1:+13788238 MS.gene35705:CDS
GGCCACTATGAGGAAAGCAA+GGG 0.654709 2.1:+13788214 MS.gene35705:CDS
ATTACTTGCAAATAACAATG+AGG 0.658433 2.1:+13788032 MS.gene35705:CDS
AGCTTATTATCGATGCACCA+TGG 0.661870 2.1:+13788423 MS.gene35705:CDS
ACTGTGTCAGCAAGGTTCTG+TGG 0.667152 2.1:-13790649 None:intergenic
GATTGGTGGAAAACTTGATG+AGG 0.667331 2.1:+13787897 MS.gene35705:CDS
GTGCATCGATAATAAGCTCG+AGG 0.678750 2.1:-13788418 None:intergenic
GTGGGCTAGTTACTCTACTG+AGG 0.679123 2.1:-13790866 None:intergenic
AGGTGGAGAATCATCAACTG+AGG 0.706865 2.1:+13787767 MS.gene35705:CDS
AATGTCTGACCAAATACCTG+AGG 0.730527 2.1:-13790559 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGACAAAAGATAATT+TGG + chr2.1:13789298-13789317 MS.gene35705:intron 15.0%
!! CATCTTAAAAATAAAAATGA+CGG - chr2.1:13789475-13789494 None:intergenic 15.0%
!! CTTTCAAAAAAAAATGAAAT+TGG - chr2.1:13789502-13789521 None:intergenic 15.0%
!!! AACTTTCTTTATAAACATTT+TGG + chr2.1:13789726-13789745 MS.gene35705:intron 15.0%
!!! GTCATTTTTATTTTTAAGAT+GGG + chr2.1:13789474-13789493 MS.gene35705:intron 15.0%
!!! TAATTTCGATAAACTTTTTT+AGG - chr2.1:13789835-13789854 None:intergenic 15.0%
!!! TAATTTCTATAAACTTTTTC+AGG - chr2.1:13788907-13788926 None:intergenic 15.0%
!! AAAAGATAATTTGGACATTA+GGG + chr2.1:13789307-13789326 MS.gene35705:intron 20.0%
!! TAAATGTTAGCTATAATAGT+TGG + chr2.1:13788487-13788506 MS.gene35705:intron 20.0%
!! TATACAAACACGTTTAAAAA+AGG - chr2.1:13789627-13789646 None:intergenic 20.0%
!! TGTTTATATTGTCATTAAAC+TGG + chr2.1:13789164-13789183 MS.gene35705:intron 20.0%
!! TTTAAACGTGTTTGTATAAA+TGG + chr2.1:13789629-13789648 MS.gene35705:intron 20.0%
!!! CGTCATTTTTATTTTTAAGA+TGG + chr2.1:13789473-13789492 MS.gene35705:intron 20.0%
!!! GTTACTGTAGTTTAATATTT+TGG - chr2.1:13789048-13789067 None:intergenic 20.0%
!!! TAATTCGGGTTTTATAAAAA+TGG - chr2.1:13790142-13790161 None:intergenic 20.0%
!!! TCTGTTTATATTGACTTATT+TGG - chr2.1:13789003-13789022 None:intergenic 20.0%
!!! TTAACTTTTTATTAGAGCTT+AGG + chr2.1:13789524-13789543 MS.gene35705:intron 20.0%
!!! TTATATCTTCCATTTTATTC+TGG - chr2.1:13789120-13789139 None:intergenic 20.0%
!!! TTTCTTTATAAACATTTTGG+TGG + chr2.1:13789729-13789748 MS.gene35705:intron 20.0%
! AAAGACTTATGAGACTATTT+GGG - chr2.1:13788964-13788983 None:intergenic 25.0%
! AAAGATAATTTGGACATTAG+GGG + chr2.1:13789308-13789327 MS.gene35705:intron 25.0%
! AAGTTGAAATTCGCTTATTA+TGG - chr2.1:13789711-13789730 None:intergenic 25.0%
! AGTTGAAATTCGCTTATTAT+GGG - chr2.1:13789710-13789729 None:intergenic 25.0%
! ATACTTATCACAACATATGA+AGG + chr2.1:13790253-13790272 MS.gene35705:CDS 25.0%
! ATCAAAAAAATTGAGCAATG+TGG - chr2.1:13789362-13789381 None:intergenic 25.0%
! ATTACTTGCAAATAACAATG+AGG + chr2.1:13788032-13788051 MS.gene35705:CDS 25.0%
! CAAAAGATAATTTGGACATT+AGG + chr2.1:13789306-13789325 MS.gene35705:intron 25.0%
! CAATAATATCCAATCAATCA+TGG + chr2.1:13788717-13788736 MS.gene35705:intron 25.0%
! CTGCTATTACTTCAATTATT+GGG + chr2.1:13790716-13790735 MS.gene35705:CDS 25.0%
! TAAAACTGTTTATCCAAACA+TGG - chr2.1:13788777-13788796 None:intergenic 25.0%
! TAGGTTTATACGCATTATTT+GGG + chr2.1:13789543-13789562 MS.gene35705:intron 25.0%
! TCAAAAAAATTGAGCAATGT+GGG - chr2.1:13789361-13789380 None:intergenic 25.0%
! TCGATATAATCAAACTCTTA+AGG - chr2.1:13789250-13789269 None:intergenic 25.0%
! TGCTATTACTTCAATTATTG+GGG + chr2.1:13790717-13790736 MS.gene35705:CDS 25.0%
! TTAAATGAATAATCATCGAG+TGG + chr2.1:13787685-13787704 MS.gene35705:intron 25.0%
! TTAGGTTTATACGCATTATT+TGG + chr2.1:13789542-13789561 MS.gene35705:intron 25.0%
! TTATATCGATGCTTGTTTAA+CGG + chr2.1:13789261-13789280 MS.gene35705:intron 25.0%
! TTATATTGTCATTAAACTGG+AGG + chr2.1:13789167-13789186 MS.gene35705:intron 25.0%
! TTTATAAAAATGGTTCACGA+CGG - chr2.1:13790132-13790151 None:intergenic 25.0%
!! ACAGCTTGATAACTTTAATT+CGG - chr2.1:13790157-13790176 None:intergenic 25.0%
!! GAAGAATGAAATGTTTGTTT+TGG + chr2.1:13788296-13788315 MS.gene35705:intron 25.0%
!! GACAATATAAACATGCTTTT+AGG - chr2.1:13789157-13789176 None:intergenic 25.0%
!! GGATTACTACAATTGTATTT+TGG - chr2.1:13789688-13789707 None:intergenic 25.0%
!! TTGAACCAATCAAAATTTTC+AGG + chr2.1:13790583-13790602 MS.gene35705:CDS 25.0%
!!! GCTCAATTTTTTTGATTGTT+TGG + chr2.1:13789366-13789385 MS.gene35705:intron 25.0%
AAGATAATTTGGACATTAGG+GGG + chr2.1:13789309-13789328 MS.gene35705:intron 30.0%
AATAACGGTACTAGCAATAA+TGG + chr2.1:13790757-13790776 MS.gene35705:CDS 30.0%
AATTACCTGAAAAGAGCTTA+TGG + chr2.1:13788922-13788941 MS.gene35705:intron 30.0%
AATTACCTGAAATGAGCTTA+TGG + chr2.1:13789850-13789869 MS.gene35705:intron 30.0%
ACAATAGCTAACAACACTAA+TGG + chr2.1:13790787-13790806 MS.gene35705:CDS 30.0%
ACACTCAAACCAGAATAAAA+TGG + chr2.1:13789108-13789127 MS.gene35705:intron 30.0%
ACATCAAGTAACAATACCAT+TGG + chr2.1:13790817-13790836 MS.gene35705:CDS 30.0%
AGCATGCATATAAGATCAAT+TGG - chr2.1:13788600-13788619 None:intergenic 30.0%
ATTACCTGAAAAGAGCTTAT+GGG + chr2.1:13788923-13788942 MS.gene35705:intron 30.0%
CAAAGACTTATGAGACTATT+TGG - chr2.1:13788965-13788984 None:intergenic 30.0%
CTAGTACCGTTATTATTGTT+TGG - chr2.1:13790751-13790770 None:intergenic 30.0%
GCTGCTATTACTTCAATTAT+TGG + chr2.1:13790715-13790734 MS.gene35705:CDS 30.0%
GTTGAAATTCGCTTATTATG+GGG - chr2.1:13789709-13789728 None:intergenic 30.0%
TAAGCACTATTGAGACTATT+TGG - chr2.1:13789891-13789910 None:intergenic 30.0%
TTGATGAGGAGAAACAAAAT+GGG + chr2.1:13787911-13787930 MS.gene35705:CDS 30.0%
! ACATGTAACATAATTTGCAC+AGG + chr2.1:13790204-13790223 MS.gene35705:intron 30.0%
! CAGCTTGATAACTTTAATTC+GGG - chr2.1:13790156-13790175 None:intergenic 30.0%
! CTTTTGTATCAGATCAATGA+TGG + chr2.1:13788346-13788365 MS.gene35705:intron 30.0%
! TTTGGTTCCAAGACAATTTA+TGG + chr2.1:13787945-13787964 MS.gene35705:CDS 30.0%
!! GAAGTCCTGAAAATTTTGAT+TGG - chr2.1:13790591-13790610 None:intergenic 30.0%
!!! AGTTGGGATTGTTGATTTTA+GGG - chr2.1:13790846-13790865 None:intergenic 30.0%
AAACATGTGCCATGATTGAT+TGG - chr2.1:13788729-13788748 None:intergenic 35.0%
AACAAATGTTGAACAAGCTG+AGG + chr2.1:13788193-13788212 MS.gene35705:CDS 35.0%
AAGCAATGATCAATCCATGA+TGG + chr2.1:13787560-13787579 MS.gene35705:CDS 35.0%
ACAATTTATGGAGCTTGGAT+TGG + chr2.1:13787957-13787976 MS.gene35705:CDS 35.0%
ACTACAGTAACAACCAAAGT+CGG + chr2.1:13789057-13789076 MS.gene35705:intron 35.0%
ACTTTGACCAACCAAATCAT+TGG - chr2.1:13789775-13789794 None:intergenic 35.0%
ATATAAACAGACCCCTAATG+AGG + chr2.1:13789012-13789031 MS.gene35705:intron 35.0%
ATGAAAAGAAGGAATCCGAT+CGG + chr2.1:13788088-13788107 MS.gene35705:intron 35.0%
ATTGCTCTTGTGAGGTAATT+TGG - chr2.1:13790391-13790410 None:intergenic 35.0%
ATTGTCATTAAACTGGAGGT+TGG + chr2.1:13789171-13789190 MS.gene35705:intron 35.0%
CTATGCTTGAAGAATAAGGA+AGG - chr2.1:13790414-13790433 None:intergenic 35.0%
CTTGATGAGGAGAAACAAAA+TGG + chr2.1:13787910-13787929 MS.gene35705:CDS 35.0%
CTTTGACCAACCAAATCATT+GGG - chr2.1:13789774-13789793 None:intergenic 35.0%
GAAGAACAAAAGCAAGTGAT+TGG + chr2.1:13787880-13787899 MS.gene35705:CDS 35.0%
GCACAGCCAAACAATAATAA+CGG + chr2.1:13790742-13790761 MS.gene35705:CDS 35.0%
GCTTGTTCAACATTTGTTTG+AGG - chr2.1:13788191-13788210 None:intergenic 35.0%
GGCACTGTTATAATATGTCA+TGG + chr2.1:13788517-13788536 MS.gene35705:intron 35.0%
GTTGCTATGCTTGAAGAATA+AGG - chr2.1:13790418-13790437 None:intergenic 35.0%
TAACAATGAGGAAGATTCCA+AGG + chr2.1:13788044-13788063 MS.gene35705:CDS 35.0%
TCCAATGTAACAGTTGGAAA+TGG - chr2.1:13790457-13790476 None:intergenic 35.0%
TCCATTTCCAACTGTTACAT+TGG + chr2.1:13790453-13790472 MS.gene35705:CDS 35.0%
TGTGTCTGATCATGAAAAGA+AGG + chr2.1:13788077-13788096 MS.gene35705:intron 35.0%
TTGCTCTTGTGAGGTAATTT+GGG - chr2.1:13790390-13790409 None:intergenic 35.0%
TTTGACTGATCTTGACTTCT+TGG - chr2.1:13788012-13788031 None:intergenic 35.0%
! AATTTTCTGCCTCAGGTATT+TGG + chr2.1:13790550-13790569 MS.gene35705:CDS 35.0%
! AGCTTGAGATTGATTTAGCT+AGG + chr2.1:13788681-13788700 MS.gene35705:intron 35.0%
! CATAATTTGCACAGGTACAA+AGG + chr2.1:13790212-13790231 MS.gene35705:intron 35.0%
! TAACATACCTGTTTTCTCAC+AGG - chr2.1:13788460-13788479 None:intergenic 35.0%
! TAGTAGAAGTACATGAGCTA+TGG - chr2.1:13788649-13788668 None:intergenic 35.0%
! TCAAACTCTTAAGGTGCTTT+CGG - chr2.1:13789241-13789260 None:intergenic 35.0%
!! AATTTTGAGGGAAGGGAAAT+TGG - chr2.1:13790534-13790553 None:intergenic 35.0%
!! AGATCAATGATGGATGTCAA+TGG + chr2.1:13788356-13788375 MS.gene35705:intron 35.0%
!!! GAGTTGGGATTGTTGATTTT+AGG - chr2.1:13790847-13790866 None:intergenic 35.0%
AAGGGAAATTGGAACTGGTT+AGG - chr2.1:13790523-13790542 None:intergenic 40.0%
AATGTCTGACCAAATACCTG+AGG - chr2.1:13790562-13790581 None:intergenic 40.0%
ACAACACATTGCAGATGCAT+TGG + chr2.1:13787818-13787837 MS.gene35705:CDS 40.0%
ACATGCCATAAGCTCATTTC+AGG - chr2.1:13789858-13789877 None:intergenic 40.0%
ACATGCTTGATGAGGGTAAT+AGG + chr2.1:13787791-13787810 MS.gene35705:CDS 40.0%
ACCAAATCATTGGGCTCAAA+TGG - chr2.1:13789765-13789784 None:intergenic 40.0%
ACCATTTGAGCCCAATGATT+TGG + chr2.1:13789761-13789780 MS.gene35705:intron 40.0%
ACTTCAACCTACCTCATTAG+GGG - chr2.1:13789953-13789972 None:intergenic 40.0%
AGACAAAAGAGCTAAGCTTG+AGG + chr2.1:13787608-13787627 MS.gene35705:CDS 40.0%
AGACACAAGTTCTTCAACCT+TGG - chr2.1:13788064-13788083 None:intergenic 40.0%
AGCTTATTATCGATGCACCA+TGG + chr2.1:13788423-13788442 MS.gene35705:CDS 40.0%
AGGGAAATTGGAACTGGTTA+GGG - chr2.1:13790522-13790541 None:intergenic 40.0%
CAATGATCAATCCATGATGG+AGG + chr2.1:13787563-13787582 MS.gene35705:CDS 40.0%
CAGAGTTGAGAACTCAAAAC+AGG - chr2.1:13788562-13788581 None:intergenic 40.0%
CCAAGACAATTTATGGAGCT+TGG + chr2.1:13787952-13787971 MS.gene35705:CDS 40.0%
CCAAGCTCCATAAATTGTCT+TGG - chr2.1:13787955-13787974 None:intergenic 40.0%
CTACAGTAACAACCAAAGTC+GGG + chr2.1:13789058-13789077 MS.gene35705:intron 40.0%
GAACAAAAGCAAGTGATTGG+TGG + chr2.1:13787883-13787902 MS.gene35705:CDS 40.0%
GACTTCAACCTACCTCATTA+GGG - chr2.1:13789954-13789973 None:intergenic 40.0%
GAGAAACAAAATGGGAATGG+TGG + chr2.1:13787919-13787938 MS.gene35705:CDS 40.0%
GAGGAGAAACAAAATGGGAA+TGG + chr2.1:13787916-13787935 MS.gene35705:CDS 40.0%
GATTGGTGGAAAACTTGATG+AGG + chr2.1:13787897-13787916 MS.gene35705:CDS 40.0%
GGATGTCAATGGAGAAAGTA+TGG + chr2.1:13788367-13788386 MS.gene35705:CDS 40.0%
GGATTGATCATTGCTTGTGT+TGG - chr2.1:13787556-13787575 None:intergenic 40.0%
GTCTTCAACATTTCGATGCT+AGG + chr2.1:13788751-13788770 MS.gene35705:intron 40.0%
GTTAGGTCCAATGTAACAGT+TGG - chr2.1:13790463-13790482 None:intergenic 40.0%
TAGCATTAACTGTGTCAGCA+AGG - chr2.1:13790660-13790679 None:intergenic 40.0%
TGAAAAGAAGGAATCCGATC+GGG + chr2.1:13788089-13788108 MS.gene35705:intron 40.0%
TGACTTCAACCTACCTCATT+AGG - chr2.1:13789955-13789974 None:intergenic 40.0%
TTGAGCAATGTGGGACATAA+AGG - chr2.1:13789352-13789371 None:intergenic 40.0%
! AACTGGAGGTTGGAGTTTTA+AGG + chr2.1:13789181-13789200 MS.gene35705:intron 40.0%
! ACCTGAGGCAGAAAATTTTG+AGG - chr2.1:13790547-13790566 None:intergenic 40.0%
! CCTGAGGCAGAAAATTTTGA+GGG - chr2.1:13790546-13790565 None:intergenic 40.0%
! GAGAAAGTATGGACAGAAGA+TGG + chr2.1:13788378-13788397 MS.gene35705:CDS 40.0%
! TGCTTCTTTCTTTTCCCGAT+CGG - chr2.1:13788106-13788125 None:intergenic 40.0%
!! AAATGGGAATGGTGGAGTTT+TGG + chr2.1:13787927-13787946 MS.gene35705:CDS 40.0%
!! AGGCAGAAAATTTTGAGGGA+AGG - chr2.1:13790542-13790561 None:intergenic 40.0%
!! GCTATAATAGTTGGTGACAC+AGG + chr2.1:13788496-13788515 MS.gene35705:intron 40.0%
!! GGCAGAAAATTTTGAGGGAA+GGG - chr2.1:13790541-13790560 None:intergenic 40.0%
!! GGTTATTAGGGAACTGGTTT+TGG - chr2.1:13790498-13790517 None:intergenic 40.0%
!! TTTGAGCCCAATGATTTGGT+TGG + chr2.1:13789765-13789784 MS.gene35705:intron 40.0%
!! TTTGGTTTGGTGACTGAGTT+AGG - chr2.1:13790480-13790499 None:intergenic 40.0%
!!! GTTGATTTTAGGGCTTCCAA+TGG - chr2.1:13790836-13790855 None:intergenic 40.0%
!!! TTAGGGAACTGGTTTTGGTT+TGG - chr2.1:13790493-13790512 None:intergenic 40.0%
AAACAGACCCCTAATGAGGT+AGG + chr2.1:13789016-13789035 MS.gene35705:intron 45.0%
AACCCTTGCTTTCCTCATAG+TGG - chr2.1:13788219-13788238 None:intergenic 45.0%
AACTGGTTAGGGGGGTTATT+AGG - chr2.1:13790511-13790530 None:intergenic 45.0%
AAGGAAGGATTGCTCTTGTG+AGG - chr2.1:13790399-13790418 None:intergenic 45.0%
ACCTGAAAAGAGCTTATGGG+TGG + chr2.1:13788926-13788945 MS.gene35705:intron 45.0%
ACTGAAGTAACGACCGAAGT+CGG + chr2.1:13789984-13790003 MS.gene35705:intron 45.0%
ACTGAGGAACATGCTTGATG+AGG + chr2.1:13787783-13787802 MS.gene35705:CDS 45.0%
ACTGGTTAGGGGGGTTATTA+GGG - chr2.1:13790510-13790529 None:intergenic 45.0%
AGGTGGAGAATCATCAACTG+AGG + chr2.1:13787767-13787786 MS.gene35705:CDS 45.0%
AGTCCATCAGCACTTGTCAT+TGG - chr2.1:13790361-13790380 None:intergenic 45.0%
CAAGAATTGTGACCCGACTT+CGG - chr2.1:13790000-13790019 None:intergenic 45.0%
CACCTTCATTCTCTCAAGCT+CGG - chr2.1:13787752-13787771 None:intergenic 45.0%
CCTGAAAAGAGCTTATGGGT+GGG + chr2.1:13788927-13788946 MS.gene35705:intron 45.0%
CGATAATAAGCTCGAGGACA+CGG - chr2.1:13788415-13788434 None:intergenic 45.0%
CTGAGGAACATGCTTGATGA+GGG + chr2.1:13787784-13787803 MS.gene35705:CDS 45.0%
GAAATTGGAACTGGTTAGGG+GGG - chr2.1:13790519-13790538 None:intergenic 45.0%
GAGTATGGTGCAAGACAAGA+AGG + chr2.1:13787843-13787862 MS.gene35705:CDS 45.0%
GATAATAAGCTCGAGGACAC+GGG - chr2.1:13788414-13788433 None:intergenic 45.0%
GCAGATGCATTGGATGAGTA+TGG + chr2.1:13787828-13787847 MS.gene35705:CDS 45.0%
GCTAAAACAGACCCCTAATG+AGG + chr2.1:13789939-13789958 MS.gene35705:intron 45.0%
GCTGCAAGAATGTTACTGTC+AGG + chr2.1:13790334-13790353 MS.gene35705:CDS 45.0%
GCTTCAACCTACCTCATTAG+GGG - chr2.1:13789026-13789045 None:intergenic 45.0%
GGAAATTGGAACTGGTTAGG+GGG - chr2.1:13790520-13790539 None:intergenic 45.0%
GGCTTCAACCTACCTCATTA+GGG - chr2.1:13789027-13789046 None:intergenic 45.0%
GGGAAATTGGAACTGGTTAG+GGG - chr2.1:13790521-13790540 None:intergenic 45.0%
TATGGACAGAAGATGGCGAA+AGG + chr2.1:13788385-13788404 MS.gene35705:CDS 45.0%
TCCTAACTTCACTGCAGCTT+TGG + chr2.1:13790690-13790709 MS.gene35705:CDS 45.0%
TGCTATGTCTTCCTCCATCA+TGG - chr2.1:13787577-13787596 None:intergenic 45.0%
TGGCTTCAACCTACCTCATT+AGG - chr2.1:13789028-13789047 None:intergenic 45.0%
TGTACCATTTCCATAGCTGC+TGG - chr2.1:13790301-13790320 None:intergenic 45.0%
TTGTGATGCTACTGCGACTA+AGG - chr2.1:13790061-13790080 None:intergenic 45.0%
TTTCGATGCTAGGCCATGTT+TGG + chr2.1:13788761-13788780 MS.gene35705:intron 45.0%
! CCCTCAAAATTTTCTGCCTC+AGG + chr2.1:13790543-13790562 MS.gene35705:CDS 45.0%
! GAAGTGTACCATGTTAGCCT+CGG - chr2.1:13788258-13788277 None:intergenic 45.0%
! GTGCATCGATAATAAGCTCG+AGG - chr2.1:13788421-13788440 None:intergenic 45.0%
! TTTTCTCACAGGACAACCCA+AGG - chr2.1:13788449-13788468 None:intergenic 45.0%
AACAAGCTGAGGCCACTATG+AGG + chr2.1:13788204-13788223 MS.gene35705:CDS 50.0%
ACCATTTCCATAGCTGCTGG+AGG - chr2.1:13790298-13790317 None:intergenic 50.0%
ACTGTGTCAGCAAGGTTCTG+TGG - chr2.1:13790652-13790671 None:intergenic 50.0%
AGCCGAGCTTGAGAGAATGA+AGG + chr2.1:13787747-13787766 MS.gene35705:CDS 50.0%
AGGCCACTATGAGGAAAGCA+AGG + chr2.1:13788213-13788232 MS.gene35705:CDS 50.0%
CGAGCTTGAGAGAATGAAGG+TGG + chr2.1:13787750-13787769 MS.gene35705:CDS 50.0%
CTGAAGTAACGACCGAAGTC+GGG + chr2.1:13789985-13790004 MS.gene35705:intron 50.0%
GAGGGAAGGGAAATTGGAAC+TGG - chr2.1:13790528-13790547 None:intergenic 50.0%
GCAGCTAAAACTCGATCTGC+AGG - chr2.1:13788134-13788153 None:intergenic 50.0%
GCCAAAGCTGCAGTGAAGTT+AGG - chr2.1:13790694-13790713 None:intergenic 50.0%
GGCCACTATGAGGAAAGCAA+GGG + chr2.1:13788214-13788233 MS.gene35705:CDS 50.0%
GGGTTGTCCTGTGAGAAAAC+AGG + chr2.1:13788450-13788469 MS.gene35705:CDS 50.0%
GGTGCAAGACAAGAAGGTAG+AGG + chr2.1:13787849-13787868 MS.gene35705:CDS 50.0%
TAGGGGGGTTATTAGGGAAC+TGG - chr2.1:13790504-13790523 None:intergenic 50.0%
TATCGATGCACCATGGCCTT+GGG + chr2.1:13788430-13788449 MS.gene35705:CDS 50.0%
TTATCGATGCACCATGGCCT+TGG + chr2.1:13788429-13788448 MS.gene35705:CDS 50.0%
TTCAGTTAGAGCTCGATCCG+AGG + chr2.1:13788238-13788257 MS.gene35705:CDS 50.0%
! CAAGAAGTACGACCCGACTT+TGG - chr2.1:13789073-13789092 None:intergenic 50.0%
! CCCACCCATAAGCTCTTTTC+AGG - chr2.1:13788930-13788949 None:intergenic 50.0%
!! ACATTAGGGGGTGCTTGTAG+CGG + chr2.1:13789321-13789340 MS.gene35705:intron 50.0%
!! GGACCAATGACAAGTGCTGA+TGG + chr2.1:13790355-13790374 MS.gene35705:CDS 50.0%
AGCTCGATCCGAGGCTAACA+TGG + chr2.1:13788247-13788266 MS.gene35705:CDS 55.0%
AGGATGCGAGGGCGATATCA+TGG - chr2.1:13790103-13790122 None:intergenic 55.0%
ATGGTTCACGACGGTGACCT+AGG - chr2.1:13790123-13790142 None:intergenic 55.0%
GCCTCCAGCAGCTATGGAAA+TGG + chr2.1:13790294-13790313 MS.gene35705:CDS 55.0%
TGATATCGCCCTCGCATCCT+AGG + chr2.1:13790103-13790122 MS.gene35705:intron 55.0%
TGCTTTGCCTCCAGCAGCTA+TGG + chr2.1:13790288-13790307 MS.gene35705:CDS 55.0%
CACAGGACAACCCAAGGCCA+TGG - chr2.1:13788443-13788462 None:intergenic 60.0%
GACGGTGACCTAGGATGCGA+GGG - chr2.1:13790114-13790133 None:intergenic 60.0%
!! AGGGGGTGCTTGTAGCGGAT+AGG + chr2.1:13789326-13789345 MS.gene35705:intron 60.0%
CGACGGTGACCTAGGATGCG+AGG - chr2.1:13790115-13790134 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 13787531 13790879 13787531 ID=MS.gene35705
chr2.1 mRNA 13787531 13790879 13787531 ID=MS.gene35705.t1;Parent=MS.gene35705
chr2.1 exon 13787531 13787629 13787531 ID=MS.gene35705.t1.exon1;Parent=MS.gene35705.t1
chr2.1 CDS 13787531 13787629 13787531 ID=cds.MS.gene35705.t1;Parent=MS.gene35705.t1
chr2.1 exon 13787733 13788079 13787733 ID=MS.gene35705.t1.exon2;Parent=MS.gene35705.t1
chr2.1 CDS 13787733 13788079 13787733 ID=cds.MS.gene35705.t1;Parent=MS.gene35705.t1
chr2.1 exon 13788121 13788268 13788121 ID=MS.gene35705.t1.exon3;Parent=MS.gene35705.t1
chr2.1 CDS 13788121 13788268 13788121 ID=cds.MS.gene35705.t1;Parent=MS.gene35705.t1
chr2.1 exon 13788358 13788471 13788358 ID=MS.gene35705.t1.exon4;Parent=MS.gene35705.t1
chr2.1 CDS 13788358 13788471 13788358 ID=cds.MS.gene35705.t1;Parent=MS.gene35705.t1
chr2.1 exon 13790226 13790879 13790226 ID=MS.gene35705.t1.exon5;Parent=MS.gene35705.t1
chr2.1 CDS 13790226 13790879 13790226 ID=cds.MS.gene35705.t1;Parent=MS.gene35705.t1
Gene Sequence

>MS.gene35705

ACTAGTTTGAATCTTCTTACGACCAACACAAGCAATGATCAATCCATGATGGAGGAAGACATAGCAAGTAATTCAGAAGACAAAAGAGCTAAGCTTGAGGTAGAGAAAATTTATTATATGTAACAACAAATTCAATAATTTGATGAAGTTGTAGTTAAATGAATAATCATCGAGTGGTTTCTATAATTAAATTATTTTTCAGCTCGTTGTTCTTCAAGCCGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAACAAAAGCAAGTGATTGGTGGAAAACTTGATGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCAAGACAATTTATGGAGCTTGGATTGGCTGCAAATAATTCTGATGCTATTGATGAACCAAGAAGTCAAGATCAGTCAAAATTACTTGCAAATAACAATGAGGAAGATTCCAAGGTTGAAGAACTTGTGTCTGATCATGAAAAGAAGGAATCCGATCGGGAAAAGAAAGAAGCAGTAGTCCTGCAGATCGAGTTTTAGCTGCTAATAATACTAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTAGAGCTCGATCCGAGGCTAACATGGTACACTTCAATTTCACATTTTAGTTAGAAGAATGAAATGTTTGTTTTGGCTTTTATATGATGCTAAAGTTTTTATTCTTTTGTATCAGATCAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCCTTGGGTTGTCCTGTGAGAAAACAGGTATGTTATTCGATATAAATGTTAGCTATAATAGTTGGTGACACAGGCACTGTTATAATATGTCATGGTCATTCACAAACATAATTTCCTGTTTTGAGTTCTCAACTCTGTCAAGTTTTATTCTACCAATTGATCTTATATGCATGCTCAATTAAATTAGTTTCAAATTATGCTCCATAGCTCATGTACTTCTACTAAAAAATGTGATGAGCTTGAGATTGATTTAGCTAGGATATATAAGTATACAATAATATCCAATCAATCATGGCACATGTTTCAGTCTTCAACATTTCGATGCTAGGCCATGTTTGGATAAACAGTTTTATTGAGCACTTATCATATAAGTGCTTATGTATAGACTATTTCTATAACAGAAGATAAAATAAAGTCAAACTGTGTTCATATAAATTATAAGTTGTTTTCATTAGCTATCCTGAAAAAGTTTATAGAAATTACCTGAAAAGAGCTTATGGGTGGGTCATAAGCTATCCCAAATAGTCTCATAAGTCTTTGTACTAGTAGATAAGTCCAAATAAGTCAATATAAACAGACCCCTAATGAGGTAGGTTGAAGCCAAAATATTAAACTACAGTAACAACCAAAGTCGGGTCGTACTTCTTGATACTAAGCAGAATCACACTCAAACCAGAATAAAATGGAAGATATAAGATAAGTTTTTGTGCCTAAAAGCATGTTTATATTGTCATTAAACTGGAGGTTGGAGTTTTAAGGTATCATATATTCTCTGCATTTTAAAATTCAAATTCCGAAAGCACCTTAAGAGTTTGATTATATCGATGCTTGTTTAACGGTTTCTTCAAAATAAAATAAAGACAAAAGATAATTTGGACATTAGGGGGTGCTTGTAGCGGATAGGCCTTTATGTCCCACATTGCTCAATTTTTTTGATTGTTTGGTGTATAAATATGTTTGAAAACTCTCATTATTTGAGATGTCTAGACGAAGATGTTTACATTCAAAATTGAACATCTTCAGTTTGCCGTCATTTTTATTTTTAAGATGGGATCCAATTTCATTTTTTTTTGAAAGATTTAACTTTTTATTAGAGCTTAGGTTTATACGCATTATTTGGGCACAAAAATACATAGCATTATTCAGCTATTTTAAAAATACATATTATGTGATTCTTTTCCTTTTTTAAACGTGTTTGTATAAATGGTGTGACTAAATAATTGTGAGCTTGTAAGACTTACCAAAATACAATTGTAGTAATCCCCATAATAAGCGAATTTCAACTTTCTTTATAAACATTTTGGTGGATCTCATTAACCATTTGAGCCCAATGATTTGGTTGGTCAAAGTGTTTTCATATAAGTTATAAGTTGTTTTCATTAGTTATCCTAAAAAAGTTTATCGAAATTACCTGAAATGAGCTTATGGCATGTCATAAACTCTCCAAATAGTCTCAATAGTGCTTATACAAGTAGATAAGTCTAAATCAGTCAAGCTAAAACAGACCCCTAATGAGGTAGGTTGAAGTCAAAATATTAAACTGAAGTAACGACCGAAGTCGGGTCACAATTCTTGATACTACACAAAATCACACTCAAATGTAACTGATGCGACCTTAGTCGCAGTAGCATCACAAACATAAAGACGTAAAAAAACCATGATATCGCCCTCGCATCCTAGGTCACCGTCGTGAACCATTTTTATAAAACCCGAATTAAAGTTATCAAGCTGTTTATGTCTAACTAGAGATCAATCTAAGACATGTAACATAATTTGCACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACATCACATTCATGCTTTGCCTCCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTACTGTCAGGACCAATGACAAGTGCTGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACTGTTACATTGGACCTAACTCAGTCACCAAACCAAAACCAGTTCCCTAATAACCCCCCTAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACTGCAGCTTTGGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCAAACAATAATAACGGTACTAGCAATAATGGTAACAGTACAATAGCTAACAACACTAATGGCAATGTTACATCAAGTAACAATACCATTGGAAGCCCTAAAATCAACAATCCCAACTCCTCAGTAGAGTAA
Protein sequence

>MS.gene35705.t1

TSLNLLTTNTSNDQSMMEEDIASNSEDKRAKLELVVLQAELERMKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEQKQVIGGKLDEEKQNGNGGVLVPRQFMELGLAANNSDAIDEPRSQDQSKLLANNNEEDSKVEELVSSSPADRVLAANNTNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNQNQFPNNPPNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNSTIANNTNGNVTSSNNTIGSPKINNPNSSVE