AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35748

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35748.t1 MTR_2g089620 97.690 303 7 0 1 303 24 326 0.0 612
MS.gene35748.t1 MTR_4g091490 45.858 338 142 11 2 303 26 358 2.28e-77 240
MS.gene35748.t1 MTR_2g011660 91.429 105 9 0 2 106 26 130 1.17e-67 214
MS.gene35748.t1 MTR_4g478180 68.852 122 38 0 1 122 25 146 4.69e-59 192
MS.gene35748.t1 MTR_5g029840 58.427 178 55 3 2 179 25 183 2.21e-58 190
MS.gene35748.t1 MTR_7g011170 71.818 110 31 0 2 111 25 134 1.25e-56 185
MS.gene35748.t1 MTR_5g007370 68.103 116 37 0 1 116 24 139 1.32e-55 182
MS.gene35748.t1 MTR_6g012690 69.912 113 34 0 2 114 25 137 1.36e-55 184
MS.gene35748.t1 MTR_4g082290 74.074 108 28 0 2 109 25 132 1.60e-55 185
MS.gene35748.t1 MTR_3g074520 71.028 107 31 0 2 108 25 131 1.00e-54 181
MS.gene35748.t1 MTR_4g073420 75.962 104 25 0 2 105 25 128 3.67e-54 178
MS.gene35748.t1 MTR_4g082230 72.222 108 30 0 2 109 25 132 1.32e-53 180
MS.gene35748.t1 MTR_3g097450 73.529 102 27 0 2 103 25 126 9.11e-51 169
MS.gene35748.t1 MTR_8g095390 71.154 104 30 0 2 105 25 128 1.28e-50 170
MS.gene35748.t1 MTR_7g115650 72.449 98 27 0 1 98 24 121 2.43e-50 166
MS.gene35748.t1 MTR_8g031360 64.706 119 40 2 1 117 25 143 1.40e-49 166
MS.gene35748.t1 MTR_7g076740 69.811 106 31 1 1 105 24 129 2.37e-49 166
MS.gene35748.t1 MTR_3g461490 67.273 110 35 1 2 111 25 133 3.81e-49 166
MS.gene35748.t1 MTR_5g079670 67.647 102 33 0 2 103 24 125 5.10e-49 162
MS.gene35748.t1 MTR_1g085040 70.093 107 32 0 2 108 25 131 9.26e-49 166
MS.gene35748.t1 MTR_7g110830 69.159 107 33 0 2 108 25 131 1.44e-48 166
MS.gene35748.t1 MTR_1g112760 65.385 104 36 0 2 105 26 129 3.66e-48 160
MS.gene35748.t1 MTR_4g105130 66.355 107 36 0 2 108 25 131 3.94e-48 164
MS.gene35748.t1 MTR_3g077110 66.346 104 35 0 2 105 25 128 9.63e-48 163
MS.gene35748.t1 MTR_6g009430 59.322 118 48 0 2 119 25 142 1.26e-47 162
MS.gene35748.t1 MTR_4g102380 67.308 104 34 0 2 105 25 128 1.69e-47 160
MS.gene35748.t1 MTR_1g085640 67.290 107 35 0 2 108 25 131 1.91e-47 163
MS.gene35748.t1 MTR_1g043080 73.404 94 25 0 1 94 24 117 2.15e-47 159
MS.gene35748.t1 MTR_1g100653 72.632 95 26 0 2 96 25 119 2.24e-47 160
MS.gene35748.t1 MTR_5g042030 67.619 105 34 0 2 106 20 124 3.13e-47 160
MS.gene35748.t1 MTR_1g076150 74.194 93 24 0 1 93 24 116 7.20e-47 158
MS.gene35748.t1 MTR_7g096930 74.194 93 24 0 1 93 24 116 9.08e-47 159
MS.gene35748.t1 MTR_2g064160 65.686 102 35 0 2 103 24 125 9.80e-47 159
MS.gene35748.t1 MTR_3g083540 64.762 105 37 0 1 105 53 157 1.82e-46 159
MS.gene35748.t1 MTR_5g078140 68.269 104 33 0 2 105 25 128 1.84e-46 159
MS.gene35748.t1 MTR_1g043050 73.404 94 25 0 1 94 24 117 2.65e-46 157
MS.gene35748.t1 MTR_4g485530 66.667 102 34 0 2 103 25 126 3.41e-46 154
MS.gene35748.t1 MTR_3g065440 69.608 102 31 0 2 103 25 126 7.05e-46 157
MS.gene35748.t1 MTR_7g117730 69.892 93 28 0 1 93 24 116 1.26e-44 152
MS.gene35748.t1 MTR_8g027345 68.421 95 30 0 1 95 24 118 2.34e-44 153
MS.gene35748.t1 MTR_7g111290 68.224 107 34 0 2 108 25 131 2.48e-44 155
MS.gene35748.t1 MTR_4g125520 70.968 93 27 0 1 93 24 116 4.49e-44 152
MS.gene35748.t1 MTR_2g089450 70.213 94 28 0 2 95 25 118 2.05e-43 149
MS.gene35748.t1 MTR_4g121460 67.742 93 30 0 1 93 24 116 4.62e-43 150
MS.gene35748.t1 MTR_4g065017 71.739 92 26 0 2 93 30 121 7.91e-43 150
MS.gene35748.t1 MTR_7g087130 62.264 106 38 1 1 104 24 129 1.49e-42 149
MS.gene35748.t1 MTR_8g098860 68.085 94 30 0 2 95 25 118 1.89e-42 149
MS.gene35748.t1 MTR_7g010210 64.583 96 34 0 1 96 24 119 3.73e-42 148
MS.gene35748.t1 MTR_3g039990 65.263 95 33 0 1 95 25 119 3.76e-42 147
MS.gene35748.t1 MTR_7g010210 64.583 96 34 0 1 96 24 119 4.06e-42 146
MS.gene35748.t1 MTR_2g097910 69.565 92 28 0 2 93 33 124 4.41e-42 147
MS.gene35748.t1 MTR_0251s0050 52.174 138 62 1 2 139 26 159 7.18e-42 145
MS.gene35748.t1 MTR_3g028740 69.565 92 28 0 2 93 35 126 9.34e-42 147
MS.gene35748.t1 MTR_8g017440 55.372 121 48 1 2 116 25 145 1.19e-41 147
MS.gene35748.t1 MTR_0140s0030 63.441 93 34 0 1 93 25 117 2.44e-41 146
MS.gene35748.t1 MTR_0489s0020 63.441 93 34 0 1 93 25 117 2.44e-41 146
MS.gene35748.t1 MTR_5g010020 60.163 123 44 2 2 119 25 147 3.58e-41 145
MS.gene35748.t1 MTR_2g034790 66.667 93 31 0 1 93 24 116 3.82e-41 145
MS.gene35748.t1 MTR_2g099740 58.929 112 39 1 2 106 25 136 3.99e-41 147
MS.gene35748.t1 MTR_2g067420 72.414 87 24 0 2 88 27 113 9.33e-41 144
MS.gene35748.t1 MTR_0008s0390 66.667 93 31 0 2 94 26 118 1.98e-40 142
MS.gene35748.t1 MTR_8g017340 46.154 169 84 3 2 164 25 192 2.24e-40 147
MS.gene35748.t1 MTR_8g017540 62.626 99 37 0 2 100 71 169 2.39e-40 145
MS.gene35748.t1 MTR_0008s0470 65.591 93 32 0 2 94 26 118 7.10e-40 141
MS.gene35748.t1 MTR_1g100667 64.211 95 34 0 2 96 26 120 1.44e-39 140
MS.gene35748.t1 MTR_8g017350 45.562 169 85 3 2 164 25 192 2.21e-39 146
MS.gene35748.t1 MTR_6g012180 67.045 88 29 0 1 88 24 111 2.74e-39 140
MS.gene35748.t1 MTR_1g017000 63.830 94 33 1 2 94 25 118 6.80e-39 137
MS.gene35748.t1 MTR_8g020490 63.441 93 34 0 1 93 20 112 7.31e-39 137
MS.gene35748.t1 MTR_2g089420 62.766 94 35 0 2 95 24 117 7.52e-39 142
MS.gene35748.t1 MTR_8g017500 56.364 110 42 1 2 105 25 134 9.40e-39 140
MS.gene35748.t1 MTR_3g052450 64.130 92 33 0 1 92 52 143 1.18e-38 143
MS.gene35748.t1 MTR_3g052430 64.130 92 33 0 1 92 53 144 1.32e-38 143
MS.gene35748.t1 MTR_8g017390 42.442 172 85 4 2 164 25 191 1.16e-37 139
MS.gene35748.t1 MTR_4g100720 64.835 91 32 0 2 92 26 116 1.30e-37 132
MS.gene35748.t1 MTR_0063s0090 65.169 89 31 0 2 90 25 113 1.43e-37 133
MS.gene35748.t1 MTR_6g055910 59.223 103 41 1 2 104 27 128 2.67e-37 134
MS.gene35748.t1 MTR_7g035075 63.441 93 34 0 1 93 26 118 3.40e-37 132
MS.gene35748.t1 MTR_7g111290 70.455 88 26 0 21 108 2 89 7.92e-37 134
MS.gene35748.t1 MTR_8g042410 49.630 135 61 3 1 135 49 176 8.18e-37 138
MS.gene35748.t1 MTR_0008s0280 63.333 90 33 0 2 91 25 114 9.44e-37 131
MS.gene35748.t1 MTR_3g011610 58.163 98 40 1 1 98 49 145 1.07e-36 137
MS.gene35748.t1 MTR_0197s0010 60.215 93 37 0 1 93 13 105 9.35e-36 129
MS.gene35748.t1 MTR_1g073170 58.696 92 38 0 1 92 32 123 1.67e-35 129
MS.gene35748.t1 MTR_4g057635 58.491 106 42 2 2 106 25 129 1.78e-35 130
MS.gene35748.t1 MTR_6g006030 61.290 93 36 0 1 93 26 118 1.87e-35 127
MS.gene35748.t1 MTR_1g110460 58.586 99 41 0 1 99 38 136 2.32e-35 130
MS.gene35748.t1 MTR_1g045610 58.696 92 38 0 1 92 33 124 3.82e-35 128
MS.gene35748.t1 MTR_1g062940 51.695 118 57 0 2 119 19 136 4.58e-35 126
MS.gene35748.t1 MTR_1g086510 50.442 113 54 1 1 111 33 145 2.02e-34 126
MS.gene35748.t1 MTR_5g014990 61.702 94 35 1 2 94 25 118 2.75e-34 127
MS.gene35748.t1 MTR_5g079120 54.545 99 45 0 1 99 73 171 3.64e-34 126
MS.gene35748.t1 MTR_1g017140 61.702 94 35 1 2 94 25 118 4.45e-34 127
MS.gene35748.t1 MTR_7g109320 63.441 93 34 0 1 93 24 116 5.86e-34 127
MS.gene35748.t1 MTR_1g021230 57.609 92 39 0 1 92 69 160 7.27e-34 129
MS.gene35748.t1 MTR_1g086530 47.788 113 57 1 1 111 45 157 8.00e-34 125
MS.gene35748.t1 MTR_3g103570 59.574 94 37 1 2 94 25 118 8.48e-34 126
MS.gene35748.t1 MTR_7g102110 57.447 94 39 1 2 94 25 118 9.16e-34 124
MS.gene35748.t1 MTR_2g095520 65.517 87 29 1 2 87 25 111 1.26e-33 125
MS.gene35748.t1 MTR_2g088170 61.224 98 37 1 1 98 41 137 1.50e-33 128
MS.gene35748.t1 MTR_5g079290 55.319 94 42 0 1 94 29 122 4.94e-33 122
MS.gene35748.t1 MTR_3g045430 45.536 112 61 0 5 116 29 140 1.11e-32 122
MS.gene35748.t1 MTR_6g090405 57.895 95 39 1 1 94 24 118 1.11e-32 121
MS.gene35748.t1 MTR_5g078800 56.383 94 41 0 1 94 19 112 1.84e-32 121
MS.gene35748.t1 MTR_8g060940 59.551 89 36 0 1 89 19 107 1.88e-32 120
MS.gene35748.t1 MTR_7g017260 56.250 96 40 1 1 94 37 132 2.15e-32 121
MS.gene35748.t1 MTR_5g079220 55.319 94 42 0 1 94 33 126 2.97e-32 120
MS.gene35748.t1 MTR_5g078930 58.889 90 37 0 1 90 21 110 2.99e-32 119
MS.gene35748.t1 MTR_0247s0040 59.551 89 36 0 2 90 20 108 3.63e-32 118
MS.gene35748.t1 MTR_4g063100 56.044 91 40 0 2 92 20 110 5.87e-32 119
MS.gene35748.t1 MTR_5g078910 54.255 94 43 0 1 94 19 112 1.15e-31 120
MS.gene35748.t1 MTR_6g055910 62.651 83 30 1 22 104 18 99 1.53e-31 118
MS.gene35748.t1 MTR_0193s0090 55.914 93 41 0 2 94 20 112 1.70e-31 117
MS.gene35748.t1 MTR_2g033170 63.333 90 33 0 2 91 37 126 1.99e-31 120
MS.gene35748.t1 MTR_5g078860 55.319 94 42 0 1 94 19 112 7.92e-31 117
MS.gene35748.t1 MTR_4g097570 63.953 86 30 1 2 86 25 110 8.48e-31 117
MS.gene35748.t1 MTR_5g062790 50.459 109 52 2 1 108 21 128 9.27e-31 117
MS.gene35748.t1 MTR_5g007300 76.562 64 15 0 2 65 77 140 9.53e-31 113
MS.gene35748.t1 MTR_0001s0360 53.191 94 44 0 1 94 19 112 9.96e-31 116
MS.gene35748.t1 MTR_4g128670 63.218 87 31 1 2 87 25 111 1.02e-30 118
MS.gene35748.t1 MTR_5g078950 56.667 90 39 0 1 90 19 108 1.07e-30 116
MS.gene35748.t1 MTR_2g096380 53.846 91 42 0 2 92 19 109 1.27e-30 115
MS.gene35748.t1 MTR_1g083630 54.348 92 42 0 1 92 24 115 2.76e-30 120
MS.gene35748.t1 MTR_5g088080 48.182 110 55 2 1 109 24 132 6.07e-30 114
MS.gene35748.t1 MTR_5g088150 48.182 110 55 2 1 109 24 132 6.07e-30 114
MS.gene35748.t1 MTR_5g488210 48.182 110 55 2 1 109 24 132 6.07e-30 114
MS.gene35748.t1 MTR_5g088640 48.182 110 55 2 1 109 24 132 7.53e-30 114
MS.gene35748.t1 MTR_4g123040 61.111 90 35 0 2 91 37 126 8.05e-30 115
MS.gene35748.t1 MTR_4g063100 65.278 72 25 0 21 92 10 81 9.75e-30 112
MS.gene35748.t1 MTR_5g488170 46.957 115 59 2 1 114 24 137 1.27e-29 113
MS.gene35748.t1 MTR_4g097570 63.218 87 30 2 2 86 25 111 2.61e-29 113
MS.gene35748.t1 MTR_2g096380 62.500 72 27 0 21 92 19 90 1.52e-27 107
MS.gene35748.t1 MTR_8g006470 48.958 96 47 2 1 95 22 116 3.00e-27 107
MS.gene35748.t1 MTR_5g088610 47.706 109 55 2 1 108 21 128 7.59e-27 108
MS.gene35748.t1 MTR_4g029540 47.170 106 52 3 1 105 22 124 7.92e-26 104
MS.gene35748.t1 MTR_4g128190 54.762 84 35 2 19 101 28 109 1.14e-24 99.8
MS.gene35748.t1 MTR_4g019370 48.077 104 47 3 1 103 48 145 3.98e-23 97.8
MS.gene35748.t1 MTR_1g085880 54.348 92 41 1 1 91 24 115 6.15e-23 94.0
MS.gene35748.t1 MTR_5g016510 34.483 145 94 1 2 146 16 159 1.01e-22 96.3
MS.gene35748.t1 MTR_1g085770 54.348 92 41 1 1 91 24 115 2.36e-22 95.1
MS.gene35748.t1 MTR_5g049190 47.253 91 47 1 1 91 29 118 4.59e-22 92.8
MS.gene35748.t1 MTR_7g061330 44.565 92 50 1 2 93 124 214 1.21e-21 95.1
MS.gene35748.t1 MTR_7g461410 44.565 92 50 1 2 93 124 214 1.21e-21 95.1
MS.gene35748.t1 MTR_3g077650 45.652 92 49 1 1 92 191 281 1.36e-21 94.7
MS.gene35748.t1 MTR_6g027340 37.278 169 90 5 2 166 27 183 1.43e-21 90.9
MS.gene35748.t1 MTR_7g061330 44.565 92 50 1 2 93 88 178 1.99e-21 94.7
MS.gene35748.t1 MTR_7g451170 44.565 92 50 1 1 92 201 291 2.30e-21 93.6
MS.gene35748.t1 MTR_6g015455 43.925 107 59 1 2 108 16 121 4.47e-21 94.0
MS.gene35748.t1 MTR_3g463400 43.956 91 50 1 2 92 144 233 4.95e-21 93.2
MS.gene35748.t1 MTR_4g094982 47.253 91 47 1 2 92 16 105 5.04e-21 90.9
MS.gene35748.t1 MTR_6g027360 38.686 137 71 4 2 137 89 213 8.10e-21 90.9
MS.gene35748.t1 MTR_1g026870 41.584 101 55 2 1 98 95 194 8.77e-21 93.2
MS.gene35748.t1 MTR_7g037260 44.565 92 50 1 1 92 155 245 1.11e-20 91.3
MS.gene35748.t1 MTR_6g074860 47.674 86 44 1 2 87 15 99 1.27e-20 89.0
MS.gene35748.t1 MTR_4g105660 46.535 101 47 3 1 96 190 288 1.33e-20 91.7
MS.gene35748.t1 MTR_3g101290 45.652 92 49 1 1 92 47 137 1.36e-20 88.6
MS.gene35748.t1 MTR_4g082040 48.352 91 46 1 2 92 116 205 1.48e-20 91.7
MS.gene35748.t1 MTR_3g110028 40.000 100 56 2 2 98 96 194 1.49e-20 92.4
MS.gene35748.t1 MTR_5g070020 42.857 91 51 1 2 92 133 222 1.51e-20 90.9
MS.gene35748.t1 MTR_7g035350 47.191 89 46 1 2 90 236 323 1.68e-20 91.7
MS.gene35748.t1 MTR_4g088015 43.956 91 50 1 1 91 231 320 2.28e-20 91.3
MS.gene35748.t1 MTR_5g041570 47.253 91 47 1 2 92 145 234 3.64e-20 90.5
MS.gene35748.t1 MTR_1g057980 45.556 90 48 1 1 90 90 178 1.13e-19 87.4
MS.gene35748.t1 MTR_6g027370 42.453 106 59 2 2 107 110 213 2.00e-19 87.4
MS.gene35748.t1 MTR_7g450950 42.222 90 51 1 1 90 167 255 3.35e-19 86.7
MS.gene35748.t1 MTR_5g082910 45.455 88 47 1 2 89 30 116 4.22e-18 82.8
MS.gene35748.t1 MTR_7g037130 40.625 96 54 2 1 96 155 247 2.32e-17 81.6
MS.gene35748.t1 MTR_7g061550 34.167 120 70 3 1 112 17 135 4.38e-17 80.9
MS.gene35748.t1 MTR_7g086960 47.253 91 47 1 2 92 100 189 4.80e-17 80.9
MS.gene35748.t1 MTR_5g010650 44.706 85 46 1 2 86 121 204 6.58e-16 78.2
MS.gene35748.t1 MTR_6g055910 55.172 58 25 1 47 104 2 58 3.25e-15 73.6
MS.gene35748.t1 MTR_0023s0210 49.231 65 33 0 1 65 19 83 3.67e-15 69.7
MS.gene35748.t1 MTR_3g089045 44.565 92 48 2 2 92 27 116 3.67e-15 74.7
MS.gene35748.t1 MTR_4g063100 65.116 43 15 0 50 92 4 46 6.33e-14 69.3
MS.gene35748.t1 MTR_5g038910 35.870 92 58 1 1 92 36 126 4.12e-13 69.7
MS.gene35748.t1 MTR_5g038910 35.870 92 58 1 1 92 36 126 6.31e-13 68.9
MS.gene35748.t1 MTR_2g096380 64.286 42 15 0 51 92 5 46 6.68e-13 66.2
MS.gene35748.t1 MTR_5g007310 50.877 57 25 2 72 128 3 56 1.53e-11 63.5
MS.gene35748.t1 MTR_1g076150 70.588 34 10 0 60 93 31 64 7.37e-11 61.2
MS.gene35748.t1 MTR_8g468380 32.609 92 61 1 1 92 32 122 7.64e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35748.t1 AT4G21440 47.147 333 137 12 2 303 25 349 4.83e-78 241
MS.gene35748.t1 AT4G05100 46.349 315 137 7 2 303 26 321 3.08e-74 231
MS.gene35748.t1 AT4G28110 61.856 194 59 3 2 190 25 208 6.05e-70 218
MS.gene35748.t1 AT5G54230 60.773 181 61 5 2 181 25 196 2.26e-65 208
MS.gene35748.t1 AT3G02940 77.064 109 25 0 2 110 25 133 6.92e-59 191
MS.gene35748.t1 AT3G02940 77.064 109 25 0 2 110 25 133 1.59e-58 190
MS.gene35748.t1 AT3G02940 77.064 109 25 0 2 110 25 133 1.59e-58 190
MS.gene35748.t1 AT5G16770 70.248 121 36 0 2 122 25 145 1.67e-58 191
MS.gene35748.t1 AT5G16770 70.248 121 36 0 2 122 25 145 1.67e-58 191
MS.gene35748.t1 AT5G16770 70.248 121 36 0 2 122 25 145 3.88e-58 190
MS.gene35748.t1 AT5G16770 70.248 121 36 0 2 122 25 145 3.88e-58 190
MS.gene35748.t1 AT3G01140 46.729 214 95 2 2 208 25 226 8.73e-57 187
MS.gene35748.t1 AT1G34670 57.576 165 66 3 2 164 25 187 3.06e-56 186
MS.gene35748.t1 AT3G01140 47.664 214 93 3 2 208 68 269 3.29e-56 186
MS.gene35748.t1 AT5G15310 65.041 123 41 1 2 124 25 145 4.77e-56 182
MS.gene35748.t1 AT5G15310 65.041 123 41 1 2 124 25 145 1.07e-55 183
MS.gene35748.t1 AT5G15310 65.041 123 41 1 2 124 25 145 1.31e-55 182
MS.gene35748.t1 AT5G65230 70.909 110 32 0 2 111 25 134 1.37e-55 182
MS.gene35748.t1 AT5G10280 65.323 124 43 0 2 125 25 148 1.46e-55 183
MS.gene35748.t1 AT4G34990 74.038 104 27 0 2 105 25 128 3.14e-55 181
MS.gene35748.t1 AT4G17785 65.041 123 43 0 2 124 26 148 1.70e-53 178
MS.gene35748.t1 AT4G17785 65.041 123 43 0 2 124 26 148 1.79e-53 178
MS.gene35748.t1 AT1G22640 60.448 134 51 1 1 132 24 157 1.83e-53 175
MS.gene35748.t1 AT5G07700 71.154 104 30 0 2 105 25 128 1.84e-53 178
MS.gene35748.t1 AT5G07700 71.154 104 30 0 2 105 25 128 1.84e-53 178
MS.gene35748.t1 AT1G18570 64.286 126 39 1 2 121 26 151 3.74e-53 177
MS.gene35748.t1 AT2G16720 73.529 102 27 0 2 103 25 126 6.02e-53 174
MS.gene35748.t1 AT4G38620 73.077 104 28 0 2 105 25 128 6.22e-53 175
MS.gene35748.t1 AT5G61420 71.154 104 30 0 2 105 25 128 2.28e-52 176
MS.gene35748.t1 AT5G07690 70.192 104 31 0 2 105 25 128 3.52e-52 174
MS.gene35748.t1 AT4G09460 72.549 102 28 0 2 103 25 126 1.17e-51 170
MS.gene35748.t1 AT3G61250 69.524 105 32 0 1 105 24 128 9.75e-51 169
MS.gene35748.t1 AT1G57560 68.224 107 34 0 2 108 25 131 1.25e-50 169
MS.gene35748.t1 AT1G57560 68.224 107 34 0 2 108 25 131 1.30e-50 170
MS.gene35748.t1 AT1G35515 68.224 107 34 0 2 108 25 131 1.33e-50 166
MS.gene35748.t1 AT5G60890 68.269 104 33 0 2 105 25 128 2.85e-50 168
MS.gene35748.t1 AT1G74080 68.224 107 34 0 2 108 25 131 2.92e-50 169
MS.gene35748.t1 AT3G13540 57.143 133 51 2 1 132 35 162 8.44e-50 166
MS.gene35748.t1 AT5G26660 61.475 122 45 1 2 123 25 144 9.06e-50 169
MS.gene35748.t1 AT4G22680 72.115 104 29 0 2 105 25 128 1.04e-49 166
MS.gene35748.t1 AT1G18710 65.094 106 37 0 5 110 28 133 4.32e-49 164
MS.gene35748.t1 AT5G56110 68.182 110 34 1 2 111 25 133 4.40e-49 166
MS.gene35748.t1 AT4G12350 71.154 104 30 0 2 105 25 128 1.52e-48 164
MS.gene35748.t1 AT1G74430 65.385 104 36 0 2 105 25 128 4.57e-48 162
MS.gene35748.t1 AT1G09540 68.269 104 33 0 2 105 25 128 1.44e-46 160
MS.gene35748.t1 AT4G01680 68.627 102 32 0 2 103 25 126 1.97e-46 157
MS.gene35748.t1 AT1G66230 68.269 104 33 0 2 105 25 128 2.33e-46 158
MS.gene35748.t1 AT1G06180 72.917 96 26 0 1 96 24 119 1.48e-45 154
MS.gene35748.t1 AT4G01680 68.627 102 32 0 2 103 25 126 1.50e-45 157
MS.gene35748.t1 AT3G23250 70.968 93 27 0 1 93 24 116 1.80e-45 155
MS.gene35748.t1 AT5G16600 67.308 104 34 0 2 105 25 128 1.92e-45 157
MS.gene35748.t1 AT3G12720 64.706 102 36 0 2 103 35 136 2.53e-45 156
MS.gene35748.t1 AT2G31180 73.118 93 25 0 1 93 24 116 2.99e-45 154
MS.gene35748.t1 AT5G62320 50.993 151 57 3 14 164 45 178 4.07e-45 153
MS.gene35748.t1 AT1G16490 70.652 92 27 0 2 93 27 118 3.69e-44 152
MS.gene35748.t1 AT3G28470 51.389 144 69 1 2 145 25 167 6.61e-43 150
MS.gene35748.t1 AT1G63910 63.208 106 39 0 2 107 25 130 8.12e-43 151
MS.gene35748.t1 AT1G56160 71.739 92 26 0 2 93 27 118 8.51e-43 149
MS.gene35748.t1 AT3G13890 67.742 93 30 0 2 94 25 117 1.15e-42 150
MS.gene35748.t1 AT5G62470 63.158 95 35 0 1 95 24 118 2.61e-42 149
MS.gene35748.t1 AT1G74650 65.957 94 32 0 1 94 24 117 2.97e-42 148
MS.gene35748.t1 AT5G35550 69.892 93 28 0 1 93 26 118 3.16e-42 146
MS.gene35748.t1 AT1G79180 68.421 95 30 0 2 96 27 121 3.86e-42 147
MS.gene35748.t1 AT1G08810 64.646 99 35 0 1 99 24 122 3.90e-42 147
MS.gene35748.t1 AT4G01680 61.404 114 32 1 2 103 25 138 3.97e-42 149
MS.gene35748.t1 AT5G12870 68.085 94 30 0 2 95 31 124 6.99e-42 146
MS.gene35748.t1 AT5G26660 62.745 102 36 1 22 123 14 113 1.01e-41 147
MS.gene35748.t1 AT3G47600 63.158 95 35 0 1 95 24 118 1.44e-41 147
MS.gene35748.t1 AT2G47460 67.742 93 30 0 1 93 24 116 2.07e-41 147
MS.gene35748.t1 AT3G28910 65.591 93 32 0 1 93 24 116 2.58e-41 146
MS.gene35748.t1 AT5G14340 61.538 104 40 0 2 105 37 140 3.52e-41 144
MS.gene35748.t1 AT3G62610 67.391 92 30 0 2 93 25 116 8.58e-41 145
MS.gene35748.t1 AT5G14750 60.215 93 37 0 1 93 28 120 1.09e-40 140
MS.gene35748.t1 AT5G49330 65.591 93 32 0 1 93 24 116 1.39e-40 144
MS.gene35748.t1 AT5G62470 63.158 95 34 1 1 95 24 117 1.74e-40 144
MS.gene35748.t1 AT5G40330 60.215 93 37 0 1 93 24 116 2.92e-40 140
MS.gene35748.t1 AT3G13890 61.765 102 30 1 2 94 25 126 1.28e-39 142
MS.gene35748.t1 AT3G08500 67.391 92 30 0 2 93 43 134 2.04e-39 141
MS.gene35748.t1 AT3G12820 65.957 94 32 0 2 95 27 120 3.49e-39 138
MS.gene35748.t1 AT5G40350 60.825 97 38 0 1 97 29 125 5.92e-39 136
MS.gene35748.t1 AT2G26960 52.381 126 58 2 1 126 32 155 1.49e-38 141
MS.gene35748.t1 AT5G52600 61.957 92 35 0 1 92 24 115 1.51e-38 135
MS.gene35748.t1 AT5G06100 56.757 111 44 2 1 108 44 153 2.74e-38 140
MS.gene35748.t1 AT3G27920 56.383 94 41 0 1 94 26 119 8.19e-38 134
MS.gene35748.t1 AT5G06100 56.757 111 44 2 1 108 44 153 9.53e-38 140
MS.gene35748.t1 AT5G06100 56.757 111 44 2 1 108 44 153 9.53e-38 140
MS.gene35748.t1 AT5G06100 56.757 111 44 2 1 108 44 153 9.53e-38 140
MS.gene35748.t1 AT5G06100 56.757 111 44 2 1 108 44 153 9.53e-38 140
MS.gene35748.t1 AT5G55020 63.265 98 35 1 1 98 38 134 1.36e-37 140
MS.gene35748.t1 AT3G11440 58.163 98 40 1 1 98 53 149 3.58e-37 138
MS.gene35748.t1 AT3G27810 59.184 98 40 0 1 98 32 129 4.39e-37 132
MS.gene35748.t1 AT1G48000 53.571 112 50 1 2 111 45 156 8.65e-37 132
MS.gene35748.t1 AT2G32460 57.282 103 43 1 1 103 18 119 1.17e-36 137
MS.gene35748.t1 AT3G11440 58.163 98 40 1 1 98 53 149 1.30e-36 137
MS.gene35748.t1 AT3G11440 58.163 98 40 1 1 98 53 149 1.30e-36 137
MS.gene35748.t1 AT3G11440 58.163 98 40 1 1 98 53 149 1.30e-36 137
MS.gene35748.t1 AT2G32460 57.282 103 43 1 1 103 30 131 1.33e-36 137
MS.gene35748.t1 AT3G01530 56.311 103 45 0 1 103 37 139 3.58e-36 129
MS.gene35748.t1 AT1G79180 51.562 128 29 1 2 96 27 154 4.77e-36 132
MS.gene35748.t1 AT4G26930 60.825 97 37 1 2 98 32 127 5.91e-36 133
MS.gene35748.t1 AT4G13480 60.870 92 36 0 1 92 18 109 1.99e-35 129
MS.gene35748.t1 AT3G30210 61.538 91 35 0 1 91 39 129 2.33e-35 129
MS.gene35748.t1 AT3G24310 59.783 92 37 0 1 92 30 121 3.72e-35 128
MS.gene35748.t1 AT4G25560 61.053 95 37 0 2 96 23 117 4.65e-35 128
MS.gene35748.t1 AT5G57620 61.702 94 35 1 2 94 25 118 9.46e-35 129
MS.gene35748.t1 AT2G47190 55.435 92 41 0 1 92 32 123 1.29e-34 127
MS.gene35748.t1 AT5G23000 62.766 94 34 1 2 94 25 118 1.40e-34 128
MS.gene35748.t1 AT3G49690 61.702 94 35 1 2 94 25 118 5.68e-34 126
MS.gene35748.t1 AT4G37780 57.895 95 39 1 1 94 24 118 5.80e-34 126
MS.gene35748.t1 AT1G25340 54.369 103 47 0 1 103 30 132 6.85e-34 125
MS.gene35748.t1 AT5G65790 61.702 94 35 1 2 94 25 118 1.23e-33 127
MS.gene35748.t1 AT5G35550 75.000 72 18 0 22 93 50 121 2.22e-33 123
MS.gene35748.t1 AT5G52260 64.211 95 34 0 2 96 25 119 2.37e-33 123
MS.gene35748.t1 AT2G36890 55.340 103 45 1 2 103 25 127 6.75e-33 123
MS.gene35748.t1 AT2G36890 55.340 103 45 1 2 103 66 168 1.21e-32 123
MS.gene35748.t1 AT1G68320 58.696 92 38 0 1 92 31 122 1.99e-32 121
MS.gene35748.t1 AT1G66370 54.348 92 42 0 1 92 20 111 2.49e-32 120
MS.gene35748.t1 AT5G59780 54.348 92 42 0 1 92 20 111 3.00e-32 120
MS.gene35748.t1 AT3G46130 54.348 92 42 0 1 92 21 112 4.88e-32 120
MS.gene35748.t1 AT3G53200 61.538 91 35 0 2 92 22 112 5.13e-32 119
MS.gene35748.t1 AT3G12820 70.423 71 21 0 25 95 2 72 7.35e-32 117
MS.gene35748.t1 AT1G22640 57.576 99 40 1 36 132 2 100 7.47e-32 117
MS.gene35748.t1 AT5G14750 64.935 77 24 1 17 93 13 86 1.15e-31 116
MS.gene35748.t1 AT3G48920 56.667 90 39 0 2 91 31 120 4.93e-31 117
MS.gene35748.t1 AT5G40350 61.538 78 30 0 20 97 3 80 6.07e-31 114
MS.gene35748.t1 AT3G06490 52.679 112 51 1 2 111 32 143 6.25e-31 118
MS.gene35748.t1 AT1G56650 49.573 117 51 1 1 109 20 136 6.78e-31 116
MS.gene35748.t1 AT5G49620 46.825 126 65 1 2 125 39 164 1.06e-30 117
MS.gene35748.t1 AT3G47600 66.216 74 25 0 22 95 39 112 1.31e-30 117
MS.gene35748.t1 AT1G66380 57.609 92 39 0 1 92 20 111 2.96e-30 111
MS.gene35748.t1 AT3G53200 71.831 71 20 0 22 92 9 79 9.10e-30 112
MS.gene35748.t1 AT1G66390 59.770 87 35 0 6 92 25 111 3.13e-29 112
MS.gene35748.t1 AT1G25340 51.456 103 45 1 1 103 30 127 4.77e-29 112
MS.gene35748.t1 AT1G25340 51.456 103 45 1 1 103 30 127 8.82e-29 112
MS.gene35748.t1 AT3G27810 59.740 77 31 0 22 98 4 80 1.63e-28 108
MS.gene35748.t1 AT3G60460 52.083 96 44 2 1 95 23 117 1.70e-28 111
MS.gene35748.t1 AT2G26950 50.000 98 48 1 1 98 28 124 2.24e-28 112
MS.gene35748.t1 AT3G46130 62.500 72 27 0 21 92 9 80 5.61e-28 108
MS.gene35748.t1 AT5G59780 63.380 71 26 0 22 92 20 90 8.77e-28 107
MS.gene35748.t1 AT3G46130 63.380 71 26 0 22 92 20 90 1.45e-27 107
MS.gene35748.t1 AT5G49620 41.549 142 67 2 2 127 39 180 3.94e-27 108
MS.gene35748.t1 AT1G71030 49.474 95 45 2 15 109 7 98 1.32e-26 103
MS.gene35748.t1 AT1G71030 52.439 82 37 1 28 109 5 84 2.68e-26 102
MS.gene35748.t1 AT3G23250 74.138 58 15 0 36 93 2 59 2.93e-26 103
MS.gene35748.t1 AT1G66380 63.889 72 26 0 21 92 7 78 1.22e-25 98.6
MS.gene35748.t1 AT1G18960 47.727 88 44 1 18 105 36 121 3.98e-24 100
MS.gene35748.t1 AT2G39880 53.846 91 41 1 2 92 61 150 4.11e-23 98.2
MS.gene35748.t1 AT5G14750 63.793 58 21 0 36 93 2 59 1.64e-22 91.7
MS.gene35748.t1 AT5G14750 63.793 58 21 0 36 93 2 59 1.64e-22 91.7
MS.gene35748.t1 AT4G28110 48.092 131 53 3 65 190 4 124 1.87e-22 92.8
MS.gene35748.t1 AT5G40360 43.956 91 50 1 1 91 168 257 7.09e-22 94.7
MS.gene35748.t1 AT4G37260 46.739 92 48 1 1 92 23 113 1.05e-21 93.6
MS.gene35748.t1 AT4G18770 39.231 130 73 4 1 129 227 351 2.70e-21 93.6
MS.gene35748.t1 AT3G55730 48.958 96 40 2 1 92 66 156 2.75e-21 93.6
MS.gene35748.t1 AT2G23290 45.652 92 49 1 1 92 23 113 3.39e-21 92.0
MS.gene35748.t1 AT3G27785 42.857 105 55 3 1 102 199 301 5.60e-21 92.8
MS.gene35748.t1 AT3G09230 44.898 98 45 2 1 94 65 157 5.61e-21 92.4
MS.gene35748.t1 AT1G69560 46.739 92 48 1 2 93 118 208 6.22e-21 91.7
MS.gene35748.t1 AT1G69560 46.739 92 48 1 2 93 134 224 7.08e-21 91.7
MS.gene35748.t1 AT5G02320 42.391 92 52 1 2 93 138 228 1.20e-20 92.4
MS.gene35748.t1 AT5G02320 42.391 92 52 1 2 93 138 228 1.20e-20 92.4
MS.gene35748.t1 AT5G02320 42.391 92 52 1 2 93 78 168 1.62e-20 91.7
MS.gene35748.t1 AT1G26780 50.000 86 42 1 2 87 109 193 1.76e-20 89.4
MS.gene35748.t1 AT1G26780 47.253 91 47 1 2 92 109 198 2.78e-20 90.1
MS.gene35748.t1 AT5G58850 45.055 91 49 1 2 92 116 205 3.91e-20 90.5
MS.gene35748.t1 AT2G25230 47.368 95 46 3 10 101 44 137 4.16e-20 87.4
MS.gene35748.t1 AT3G50060 43.956 91 50 1 2 92 17 106 4.79e-20 88.6
MS.gene35748.t1 AT5G67300 45.055 91 49 1 2 92 17 106 9.66e-20 87.8
MS.gene35748.t1 AT3G09370 40.541 111 53 3 2 104 146 251 1.31e-19 89.4
MS.gene35748.t1 AT3G09370 40.541 111 53 3 2 104 141 246 1.37e-19 89.4
MS.gene35748.t1 AT3G09370 40.541 111 53 3 2 104 154 259 1.51e-19 89.0
MS.gene35748.t1 AT3G29020 42.391 92 52 1 2 93 76 166 1.64e-19 85.9
MS.gene35748.t1 AT5G11050 43.956 91 50 1 2 92 116 205 1.85e-19 88.6
MS.gene35748.t1 AT4G32730 40.217 92 54 1 2 93 98 188 1.89e-19 89.4
MS.gene35748.t1 AT4G32730 40.217 92 54 1 2 93 98 188 1.89e-19 89.4
MS.gene35748.t1 AT4G32730 40.217 92 54 1 2 93 98 188 1.89e-19 89.4
MS.gene35748.t1 AT4G32730 40.217 92 54 1 2 93 98 188 1.89e-19 89.4
MS.gene35748.t1 AT3G29020 42.391 92 52 1 2 93 78 168 2.03e-19 87.0
MS.gene35748.t1 AT4G32730 40.217 92 54 1 2 93 98 188 2.44e-19 89.0
MS.gene35748.t1 AT1G17950 45.055 91 49 1 2 92 16 105 3.92e-19 85.1
MS.gene35748.t1 AT5G61420 72.917 48 13 0 58 105 2 49 5.87e-19 85.5
MS.gene35748.t1 AT5G17800 45.263 95 51 1 2 96 104 197 1.57e-18 84.7
MS.gene35748.t1 AT4G33450 42.857 91 51 1 2 92 30 119 2.39e-18 83.2
MS.gene35748.t1 AT5G11510 40.206 97 49 2 1 93 91 182 2.96e-18 85.5
MS.gene35748.t1 AT5G11510 40.206 97 49 2 1 93 91 182 2.96e-18 85.5
MS.gene35748.t1 AT5G11510 40.206 97 49 2 1 93 91 182 2.96e-18 85.5
MS.gene35748.t1 AT5G11510 40.206 97 49 2 1 93 91 182 3.72e-18 85.1
MS.gene35748.t1 AT5G11510 40.206 97 49 2 1 93 91 182 3.73e-18 85.1
MS.gene35748.t1 AT5G15310 58.333 60 23 1 65 124 9 66 7.96e-17 78.6
MS.gene35748.t1 AT5G40430 41.379 87 50 1 11 97 73 158 1.03e-16 78.6
MS.gene35748.t1 AT1G73410 46.739 92 46 2 2 92 17 106 1.34e-16 78.2
MS.gene35748.t1 AT4G25560 67.347 49 16 0 48 96 3 51 1.59e-16 77.4
MS.gene35748.t1 AT1G73410 46.739 92 46 2 2 92 17 106 1.61e-16 77.0
MS.gene35748.t1 AT1G22640 50.000 70 33 1 65 132 16 85 1.85e-15 73.6
MS.gene35748.t1 AT2G37630 39.785 93 54 1 1 91 14 106 2.21e-15 76.3
MS.gene35748.t1 AT4G00540 50.725 69 34 0 25 93 139 207 5.56e-15 75.1
MS.gene35748.t1 AT4G00540 50.725 69 34 0 25 93 137 205 7.77e-15 74.7
MS.gene35748.t1 AT1G66380 49.275 69 35 0 1 69 20 88 1.29e-14 69.3
MS.gene35748.t1 AT5G39700 37.895 95 57 2 2 96 67 159 4.36e-14 70.1
MS.gene35748.t1 AT5G59780 62.791 43 16 0 50 92 4 46 7.86e-14 68.6
MS.gene35748.t1 AT3G46130 62.791 43 16 0 50 92 4 46 1.40e-13 68.6
MS.gene35748.t1 AT1G14350 38.043 92 56 1 1 92 35 125 3.67e-13 69.7
MS.gene35748.t1 AT1G14350 38.043 92 56 1 1 92 35 125 3.67e-13 69.7
MS.gene35748.t1 AT1G74650 65.000 40 14 0 55 94 2 41 1.19e-12 67.0
MS.gene35748.t1 AT1G74430 50.980 51 25 0 55 105 9 59 1.95e-12 65.5
MS.gene35748.t1 AT3G28910 64.103 39 14 0 55 93 2 40 4.99e-12 65.1
MS.gene35748.t1 AT2G02820 35.870 92 58 1 1 92 40 130 5.21e-12 66.6
MS.gene35748.t1 AT2G02820 35.870 92 58 1 1 92 40 130 5.75e-12 66.2
MS.gene35748.t1 AT2G02820 35.870 92 58 1 1 92 40 130 8.54e-12 65.5
MS.gene35748.t1 AT5G14340 58.537 41 17 0 65 105 10 50 2.69e-11 62.0

Find 57 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACAAATCCTTGTTATTT+TGG 0.086118 2.1:+12505474 MS.gene35748:CDS
ATTAAACAACAACATAAATT+TGG 0.102822 2.1:+12505293 MS.gene35748:CDS
CCATCATTTCTGAACTTATT+AGG 0.169920 2.1:+12505213 MS.gene35748:CDS
GCAGCTAGCTTTAACAATTC+AGG 0.221689 2.1:-12505258 None:intergenic
ATTCTCAGATCAGCTTTATT+AGG 0.234361 2.1:+12505171 MS.gene35748:CDS
TATTTCATTGTCTGTTCTTC+CGG 0.234826 2.1:-12505040 None:intergenic
AATGTGAATAATGGCTTATT+AGG 0.258840 2.1:+12505423 MS.gene35748:CDS
ACACTCATGGACCTGGAAAT+TGG 0.273611 2.1:+12504200 MS.gene35748:CDS
AGCTGATCTGAGAATATTAA+TGG 0.303694 2.1:-12505163 None:intergenic
TTCAGAAATGATGGATTCAT+TGG 0.316918 2.1:-12505204 None:intergenic
GGGAGGTTGCGCCAATTTCC+AGG 0.330792 2.1:-12504211 None:intergenic
ATTTCATTGTCTGTTCTTCC+GGG 0.338932 2.1:-12505039 None:intergenic
TTAAACAACAACATAAATTT+GGG 0.340052 2.1:+12505294 MS.gene35748:CDS
AACCTTCCTCTCTTGATATC+AGG 0.347637 2.1:-12504394 None:intergenic
CAAACCCACAATGTGAATAA+TGG 0.359199 2.1:+12505414 MS.gene35748:CDS
ACTACTGGAACACGCACATT+AGG 0.393806 2.1:+12505067 MS.gene35748:CDS
AGACGTGGAGTATGAGTAAC+AGG 0.402224 2.1:-12505117 None:intergenic
TTTCATTGCCTAAATAATGA+TGG 0.404066 2.1:+12505531 MS.gene35748:CDS
ACTTGTTTCCCAAGACACTA+TGG 0.407800 2.1:-12504450 None:intergenic
CCTAATAAGTTCAGAAATGA+TGG 0.415038 2.1:-12505213 None:intergenic
CAGCTAGCTTTAACAATTCA+GGG 0.416492 2.1:-12505257 None:intergenic
ATTCAGCTCCATAGTGTCTT+GGG 0.423890 2.1:+12504442 MS.gene35748:CDS
CGAAATTCCAGAGAGTACTT+TGG 0.459725 2.1:+12505689 MS.gene35748:CDS
ACAATGAAATAAAGAACTAC+TGG 0.460692 2.1:+12505052 MS.gene35748:CDS
TATTCAGCTCCATAGTGTCT+TGG 0.463180 2.1:+12504441 MS.gene35748:CDS
TAAGCCATTATTCACATTGT+GGG 0.464209 2.1:-12505418 None:intergenic
GTATTTGAAATTGATCTTGA+GGG 0.468730 2.1:-12505386 None:intergenic
AATACTCTCTTCTTCTTCAA+AGG 0.469466 2.1:-12504419 None:intergenic
CTCAGATCAGCTTTATTAGG+AGG 0.473968 2.1:+12505174 MS.gene35748:CDS
ATCAACTACATTAACACTCA+TGG 0.479738 2.1:+12504187 MS.gene35748:CDS
TCAGAAATGATGGATTCATT+GGG 0.480115 2.1:-12505203 None:intergenic
GGTGTTGGTGTCGTCGATAA+AGG 0.492897 2.1:-12505597 None:intergenic
GCAAGAGTTGTCGCCTTCGA+TGG 0.493189 2.1:+12504356 MS.gene35748:CDS
AAACAGTATGGGATATGAAT+CGG 0.505907 2.1:+12505560 MS.gene35748:CDS
TTTATGTCCAAAGTACTCTC+TGG 0.506617 2.1:-12505696 None:intergenic
GGTATTTGAAATTGATCTTG+AGG 0.514597 2.1:-12505387 None:intergenic
AAATGATGGATTCATTGGGT+TGG 0.522342 2.1:-12505199 None:intergenic
TACATTAACACTCATGGACC+TGG 0.525590 2.1:+12504193 MS.gene35748:CDS
TTCACATTGTGGGTTTGAGT+TGG 0.528626 2.1:-12505408 None:intergenic
ATAAGCCATTATTCACATTG+TGG 0.563366 2.1:-12505419 None:intergenic
TAGCTGCACAGAGGAAGAGA+GGG 0.566398 2.1:+12505638 MS.gene35748:CDS
TATGTTGTTGTTTAATAATG+CGG 0.581767 2.1:-12505286 None:intergenic
ACATATGTTGATGATGGTGT+TGG 0.584725 2.1:-12505612 None:intergenic
ATATTATTACAGGTCTTCAA+AGG 0.587096 2.1:+12504329 MS.gene35748:intron
CTATTCACATATGTTGATGA+TGG 0.588046 2.1:-12505618 None:intergenic
ATTACAGGTCTTCAAAGGTG+TGG 0.593786 2.1:+12504334 MS.gene35748:intron
TCATTTCTGAACTTATTAGG+TGG 0.595476 2.1:+12505216 MS.gene35748:CDS
GCTATAGCTGCTAGATTACC+CGG 0.599027 2.1:+12505021 MS.gene35748:CDS
ATAGCTGCACAGAGGAAGAG+AGG 0.602380 2.1:+12505637 MS.gene35748:CDS
TCAAATAGTTTGTCCATCGA+AGG 0.602928 2.1:-12504369 None:intergenic
GACCTGATATCAAGAGAGGA+AGG 0.621894 2.1:+12504392 MS.gene35748:CDS
TTGAGACCTGATATCAAGAG+AGG 0.625731 2.1:+12504388 MS.gene35748:CDS
TCAAATAGATGTTCGAGACG+TGG 0.628536 2.1:-12505132 None:intergenic
AAATCCTCTCCAAAATAACA+AGG 0.633825 2.1:-12505483 None:intergenic
AGGAAAAGACTACTTCGAAG+TGG 0.647134 2.1:+12505087 MS.gene35748:CDS
TGATCTGAGAATATTAATGG+AGG 0.677931 2.1:-12505160 None:intergenic
ATATGTGAATAGCTGCACAG+AGG 0.785270 2.1:+12505629 MS.gene35748:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAAAAAAAAAAAAAAC+AGG + chr2.1:12504626-12504645 MS.gene35748:intron 10.0%
!! ATTAAACAACAACATAAATT+TGG + chr2.1:12505293-12505312 MS.gene35748:CDS 15.0%
!! TTAAACAACAACATAAATTT+GGG + chr2.1:12505294-12505313 MS.gene35748:CDS 15.0%
!! ACATTCTACACAATATAATA+TGG - chr2.1:12504831-12504850 None:intergenic 20.0%
!! TAATCAAAATTTCACATACT+TGG + chr2.1:12504565-12504584 MS.gene35748:intron 20.0%
!! TCTTTGAATCTCTAAATTTA+AGG + chr2.1:12504726-12504745 MS.gene35748:intron 20.0%
!! TTATGTTTATGTAACATAGA+TGG + chr2.1:12504513-12504532 MS.gene35748:intron 20.0%
!!! AATACAAATCCTTGTTATTT+TGG + chr2.1:12505474-12505493 MS.gene35748:CDS 20.0%
!!! TATGTTGTTGTTTAATAATG+CGG - chr2.1:12505289-12505308 None:intergenic 20.0%
!!! TTTTGCTTGAATATTATTAC+AGG + chr2.1:12504319-12504338 MS.gene35748:intron 20.0%
!!! TTTTGTTTCCATCATTATTT+AGG - chr2.1:12505542-12505561 None:intergenic 20.0%
! AAAAACAGGTGCATAAAAAT+CGG + chr2.1:12504640-12504659 MS.gene35748:intron 25.0%
! AAGCTAATTGGTTAAATACA+AGG - chr2.1:12504911-12504930 None:intergenic 25.0%
! AATGTGAATAATGGCTTATT+AGG + chr2.1:12505423-12505442 MS.gene35748:CDS 25.0%
! ACAATGAAATAAAGAACTAC+TGG + chr2.1:12505052-12505071 MS.gene35748:CDS 25.0%
! ATATTATTACAGGTCTTCAA+AGG + chr2.1:12504329-12504348 MS.gene35748:intron 25.0%
! CTAAATTTAAGGATTATGTG+TGG + chr2.1:12504737-12504756 MS.gene35748:intron 25.0%
! GATGGTAATTAATTTAGACA+TGG + chr2.1:12504531-12504550 MS.gene35748:intron 25.0%
! TTGTTCAGTTATGAAAAACA+AGG - chr2.1:12504490-12504509 None:intergenic 25.0%
! TTGTTTACCATGAACATTAT+AGG + chr2.1:12504992-12505011 MS.gene35748:intron 25.0%
! TTTCATTGCCTAAATAATGA+TGG + chr2.1:12505531-12505550 MS.gene35748:CDS 25.0%
!! GTATTTGAAATTGATCTTGA+GGG - chr2.1:12505389-12505408 None:intergenic 25.0%
AAACAGTATGGGATATGAAT+CGG + chr2.1:12505560-12505579 MS.gene35748:CDS 30.0%
AAATCCTCTCCAAAATAACA+AGG - chr2.1:12505486-12505505 None:intergenic 30.0%
AATACTCTCTTCTTCTTCAA+AGG - chr2.1:12504422-12504441 None:intergenic 30.0%
AGCTGATCTGAGAATATTAA+TGG - chr2.1:12505166-12505185 None:intergenic 30.0%
ATAAGCCATTATTCACATTG+TGG - chr2.1:12505422-12505441 None:intergenic 30.0%
ATCAACTACATTAACACTCA+TGG + chr2.1:12504187-12504206 MS.gene35748:CDS 30.0%
CCATCATTTCTGAACTTATT+AGG + chr2.1:12505213-12505232 MS.gene35748:CDS 30.0%
CCTAATAAGTTCAGAAATGA+TGG - chr2.1:12505216-12505235 None:intergenic 30.0%
GATGGAAACAAAAACAGTAT+GGG + chr2.1:12505549-12505568 MS.gene35748:CDS 30.0%
TAAGCCATTATTCACATTGT+GGG - chr2.1:12505421-12505440 None:intergenic 30.0%
TATTTCATTGTCTGTTCTTC+CGG - chr2.1:12505043-12505062 None:intergenic 30.0%
TCATTTCTGAACTTATTAGG+TGG + chr2.1:12505216-12505235 MS.gene35748:CDS 30.0%
TGATCTGAGAATATTAATGG+AGG - chr2.1:12505163-12505182 None:intergenic 30.0%
TGATGGAAACAAAAACAGTA+TGG + chr2.1:12505548-12505567 MS.gene35748:CDS 30.0%
TTTACCATGAACATTATAGG+TGG + chr2.1:12504995-12505014 MS.gene35748:intron 30.0%
! ATAATTGGTACCAGCATTTT+TGG - chr2.1:12504236-12504255 None:intergenic 30.0%
! CTATTCACATATGTTGATGA+TGG - chr2.1:12505621-12505640 None:intergenic 30.0%
! GGTATTTGAAATTGATCTTG+AGG - chr2.1:12505390-12505409 None:intergenic 30.0%
! TAATTGGTACCAGCATTTTT+GGG - chr2.1:12504235-12504254 None:intergenic 30.0%
!! ATTCTCAGATCAGCTTTATT+AGG + chr2.1:12505171-12505190 MS.gene35748:CDS 30.0%
!! TCAGAAATGATGGATTCATT+GGG - chr2.1:12505206-12505225 None:intergenic 30.0%
!! TTCAGAAATGATGGATTCAT+TGG - chr2.1:12505207-12505226 None:intergenic 30.0%
!!! AAATCCTTGTTATTTTGGAG+AGG + chr2.1:12505479-12505498 MS.gene35748:CDS 30.0%
AGGTGCATAAAAATCGGATT+TGG + chr2.1:12504646-12504665 MS.gene35748:intron 35.0%
ATTTCATTGTCTGTTCTTCC+GGG - chr2.1:12505042-12505061 None:intergenic 35.0%
CAAACCCACAATGTGAATAA+TGG + chr2.1:12505414-12505433 MS.gene35748:CDS 35.0%
! AATTGGTACCAGCATTTTTG+GGG - chr2.1:12504234-12504253 None:intergenic 35.0%
! ACCTTTTCACACAAGCTAAT+TGG - chr2.1:12504923-12504942 None:intergenic 35.0%
! TCAAATAGTTTGTCCATCGA+AGG - chr2.1:12504372-12504391 None:intergenic 35.0%
! TTTATGTCCAAAGTACTCTC+TGG - chr2.1:12505699-12505718 None:intergenic 35.0%
! TTTTACCATTAACCTCGTAG+AGG + chr2.1:12504785-12504804 MS.gene35748:intron 35.0%
!! AAATGATGGATTCATTGGGT+TGG - chr2.1:12505202-12505221 None:intergenic 35.0%
!! ACATATGTTGATGATGGTGT+TGG - chr2.1:12505615-12505634 None:intergenic 35.0%
!! ACCAATTAGCTTGTGTGAAA+AGG + chr2.1:12504919-12504938 MS.gene35748:intron 35.0%
!! CAGCTAGCTTTAACAATTCA+GGG - chr2.1:12505260-12505279 None:intergenic 35.0%
AACCTTCCTCTCTTGATATC+AGG - chr2.1:12504397-12504416 None:intergenic 40.0%
ACTTGTTTCCCAAGACACTA+TGG - chr2.1:12504453-12504472 None:intergenic 40.0%
AGGAAAAGACTACTTCGAAG+TGG + chr2.1:12505087-12505106 MS.gene35748:CDS 40.0%
ATATGTGAATAGCTGCACAG+AGG + chr2.1:12505629-12505648 MS.gene35748:CDS 40.0%
ATTACAGGTCTTCAAAGGTG+TGG + chr2.1:12504334-12504353 MS.gene35748:intron 40.0%
ATTCAGCTCCATAGTGTCTT+GGG + chr2.1:12504442-12504461 MS.gene35748:CDS 40.0%
CAGACCACCTATAATGTTCA+TGG - chr2.1:12505002-12505021 None:intergenic 40.0%
GTAAACCTCTACGAGGTTAA+TGG - chr2.1:12504793-12504812 None:intergenic 40.0%
TACATTAACACTCATGGACC+TGG + chr2.1:12504193-12504212 MS.gene35748:CDS 40.0%
TATTCAGCTCCATAGTGTCT+TGG + chr2.1:12504441-12504460 MS.gene35748:CDS 40.0%
TCAAATAGATGTTCGAGACG+TGG - chr2.1:12505135-12505154 None:intergenic 40.0%
TTCACATTGTGGGTTTGAGT+TGG - chr2.1:12505411-12505430 None:intergenic 40.0%
TTGAGACCTGATATCAAGAG+AGG + chr2.1:12504388-12504407 MS.gene35748:CDS 40.0%
!! CGAAATTCCAGAGAGTACTT+TGG + chr2.1:12505689-12505708 MS.gene35748:CDS 40.0%
!! CTCAGATCAGCTTTATTAGG+AGG + chr2.1:12505174-12505193 MS.gene35748:CDS 40.0%
!! GCAGCTAGCTTTAACAATTC+AGG - chr2.1:12505261-12505280 None:intergenic 40.0%
ACACTCATGGACCTGGAAAT+TGG + chr2.1:12504200-12504219 MS.gene35748:CDS 45.0%
ACTACTGGAACACGCACATT+AGG + chr2.1:12505067-12505086 MS.gene35748:CDS 45.0%
AGACGTGGAGTATGAGTAAC+AGG - chr2.1:12505120-12505139 None:intergenic 45.0%
GACCTGATATCAAGAGAGGA+AGG + chr2.1:12504392-12504411 MS.gene35748:CDS 45.0%
GCTATAGCTGCTAGATTACC+CGG + chr2.1:12505021-12505040 MS.gene35748:CDS 45.0%
TAACCTCGTAGAGGTTTACG+AGG + chr2.1:12504794-12504813 MS.gene35748:intron 45.0%
TTACCTCGTAAACCTCTACG+AGG - chr2.1:12504800-12504819 None:intergenic 45.0%
!! TTAAATTAAATTGATATAAT+TGG - chr2.1:12504251-12504270 None:intergenic 5.0%
!!! TATTTTAGATATAAAAATTT+AGG - chr2.1:12504865-12504884 None:intergenic 5.0%
ATAGCTGCACAGAGGAAGAG+AGG + chr2.1:12505637-12505656 MS.gene35748:CDS 50.0%
TAGCTGCACAGAGGAAGAGA+GGG + chr2.1:12505638-12505657 MS.gene35748:CDS 50.0%
!! GGTGTTGGTGTCGTCGATAA+AGG - chr2.1:12505600-12505619 None:intergenic 50.0%
!! TGGTACCAGCATTTTTGGGG+AGG - chr2.1:12504231-12504250 None:intergenic 50.0%
CGCAACCTCCCCAAAAATGC+TGG + chr2.1:12504223-12504242 MS.gene35748:CDS 55.0%
GCAAGAGTTGTCGCCTTCGA+TGG + chr2.1:12504356-12504375 MS.gene35748:CDS 55.0%
GGGAGGTTGCGCCAATTTCC+AGG - chr2.1:12504214-12504233 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 12504181 12505731 12504181 ID=MS.gene35748
chr2.1 mRNA 12504181 12505731 12504181 ID=MS.gene35748.t1;Parent=MS.gene35748
chr2.1 exon 12504181 12504244 12504181 ID=MS.gene35748.t1.exon1;Parent=MS.gene35748.t1
chr2.1 CDS 12504181 12504244 12504181 ID=cds.MS.gene35748.t1;Parent=MS.gene35748.t1
chr2.1 exon 12504341 12504470 12504341 ID=MS.gene35748.t1.exon2;Parent=MS.gene35748.t1
chr2.1 CDS 12504341 12504470 12504341 ID=cds.MS.gene35748.t1;Parent=MS.gene35748.t1
chr2.1 exon 12505014 12505731 12505014 ID=MS.gene35748.t1.exon3;Parent=MS.gene35748.t1
chr2.1 CDS 12505014 12505731 12505014 ID=cds.MS.gene35748.t1;Parent=MS.gene35748.t1
Gene Sequence

>MS.gene35748

ATGCTTATCAACTACATTAACACTCATGGACCTGGAAATTGGCGCAACCTCCCCAAAAATGCTGGTACCAATTATATCAATTTAATTTAATTACTTACTTCTTCTTTAATGTACTGTAATTAGTTTCTAATGAACTTGTTTTGCTTGAATATTATTACAGGTCTTCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGACAAACTATTTGAGACCTGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGAGTATTATTCAGCTCCATAGTGTCTTGGGAAACAAGTACGTGTGTCATTTTCCTTGTTTTTCATAACTGAACAATGATTATGTTTATGTAACATAGATGGTAATTAATTTAGACATGGTTCAATTTAGCTAATCAAAATTTCACATACTTGGAATGATAATGTCTTAAACTAATAGTTGTAAAAGAAATCTTGAAAAAAAAAAAAAAAACAGGTGCATAAAAATCGGATTTGGATTCTCTGCAGCGACTGCATGATGTAGCACGACACAAAACTCTTAGATTTAGAGATATCTTTGAATCTCTAAATTTAAGGATTATGTGTGGTCGTTGCAGATGATTTGTACAACAATTTTACCATTAACCTCGTAGAGGTTTACGAGGTAATAATTTCTCCATATTATATTGTGTAGAATGTGTCTCACTTGTCCTAAATTTTTATATCTAAAATAAAAAGATATAATTAACTTTTCATCCTTGTATTTAACCAATTAGCTTGTGTGAAAAGGTTTCAACTGTTTTTTTTGTTATTGAAAGACTTTATGCTAAGTGTTTTTTATTGTTTACCATGAACATTATAGGTGGTCTGCTATAGCTGCTAGATTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATCGATCCTGTTACTCATACTCCACGTCTCGAACATCTATTTGACATGTCCTCCATTAATATTCTCAGATCAGCTTTATTAGGAGGAACCAACCCAATGAATCCATCATTTCTGAACTTATTAGGTGGTGCTCAAGCTTTGATGAACCCTGAATTGTTAAAGCTAGCTGCGACAGCCGCATTATTAAACAACAACATAAATTTGGGTTCACAGAATCAACAACAAATCAATAATGCTGCTAATAGTACTCAACAACAAGTGCAAAATCAAGTTTACCCTCAAGATCAATTTCAAATACCAACTCAAACCCACAATGTGAATAATGGCTTATTAGGAAACATGAGTTGCTCAAGTTCAGCTGAAAATACAAATCCTTGTTATTTTGGAGAGGATTTGATTTCTAAACAATATTCAGAATTGTTTCATTGCCTAAATAATGATGGAAACAAAAACAGTATGGGATATGAATCGGTTATATCGACTACTCCTTTATCGACGACACCAACACCATCATCAACATATGTGAATAGCTGCACAGAGGAAGAGAGGGATACATATTGCAGTGACATATTCAAGTTCGAAATTCCAGAGAGTACTTTGGACATAAATGATTTCTTGTAA
Protein sequence

>MS.gene35748.t1

MLINYINTHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEESIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLEHLFDMSSINILRSALLGGTNPMNPSFLNLLGGAQALMNPELLKLAATAALLNNNINLGSQNQQQINNAANSTQQQVQNQVYPQDQFQIPTQTHNVNNGLLGNMSCSSSAENTNPCYFGEDLISKQYSELFHCLNNDGNKNSMGYESVISTTPLSTTPTPSSTYVNSCTEEERDTYCSDIFKFEIPESTLDINDFL