AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36323.t1 MTR_2g101720 96.977 794 20 1 1 790 1 794 0.0 1601
MS.gene36323.t1 MTR_8g432540 43.247 807 366 15 34 788 43 809 0.0 644
MS.gene36323.t1 MTR_2g088470 44.225 710 357 10 106 788 38 735 0.0 621
MS.gene36323.t1 MTR_7g076080 41.466 791 391 14 39 788 18 777 0.0 619
MS.gene36323.t1 MTR_4g047800 42.800 750 377 13 66 788 8 732 0.0 617
MS.gene36323.t1 MTR_1g101280 42.165 702 352 12 133 785 54 750 0.0 572
MS.gene36323.t1 MTR_6g477820 40.084 711 358 12 133 787 27 725 0.0 560
MS.gene36323.t1 MTR_5g029320 37.290 775 410 15 82 785 9 778 1.01e-167 504
MS.gene36323.t1 MTR_0198s0030 38.369 748 382 12 95 785 26 751 8.46e-166 498
MS.gene36323.t1 MTR_5g005600 37.931 696 381 14 126 785 36 716 5.99e-154 466
MS.gene36323.t1 MTR_7g427710 37.664 685 362 16 122 787 2 640 4.28e-152 459
MS.gene36323.t1 MTR_2g030570 32.425 697 434 13 118 785 7 695 1.19e-118 374
MS.gene36323.t1 MTR_2g030600 31.313 693 440 14 118 785 7 688 1.14e-108 347
MS.gene36323.t1 MTR_2g030660 31.186 683 408 21 125 785 5 647 2.17e-92 303
MS.gene36323.t1 MTR_7g427690 36.997 373 209 7 299 663 57 411 6.54e-85 278
MS.gene36323.t1 MTR_2g083350 30.597 536 322 13 290 785 6 531 2.10e-73 249
MS.gene36323.t1 MTR_2g083330 29.750 521 321 10 301 786 16 526 4.28e-68 235
MS.gene36323.t1 MTR_7g427700 35.314 303 163 6 122 416 2 279 3.45e-50 182
MS.gene36323.t1 MTR_7g427700 37.888 161 82 5 637 787 281 433 3.63e-22 100
MS.gene36323.t1 MTR_0653s0020 35.638 188 102 5 482 667 3 173 1.34e-36 137
MS.gene36323.t1 MTR_2g101740 75.281 89 7 1 702 790 1 74 9.86e-35 127
MS.gene36323.t1 MTR_2g030690 31.741 293 174 10 503 785 1 277 2.32e-29 119
MS.gene36323.t1 MTR_7g027265 43.284 134 74 1 123 256 5 136 3.98e-29 113
MS.gene36323.t1 MTR_5g046040 38.323 167 93 4 133 296 31 190 1.29e-26 112
MS.gene36323.t1 MTR_3g109800 21.516 739 418 25 125 779 7 667 1.44e-25 113
MS.gene36323.t1 MTR_2g094520 25.000 520 307 17 138 636 23 480 1.65e-25 113
MS.gene36323.t1 MTR_3g109800 21.516 739 418 25 125 779 7 667 1.73e-25 113
MS.gene36323.t1 MTR_3g109800 21.516 739 418 25 125 779 7 667 2.34e-25 112
MS.gene36323.t1 MTR_4g058970 23.218 547 313 19 122 636 12 483 1.66e-22 103
MS.gene36323.t1 MTR_8g013980 22.348 528 314 17 138 636 15 475 1.94e-22 103
MS.gene36323.t1 MTR_2g101190 20.997 662 381 25 122 720 5 587 3.96e-22 102
MS.gene36323.t1 MTR_7g027605 43.956 91 50 1 387 477 2 91 4.83e-20 85.9
MS.gene36323.t1 MTR_0653s0010 41.935 124 55 4 673 787 1 116 1.45e-18 82.4
MS.gene36323.t1 MTR_2g101750 80.435 46 9 0 745 790 9 54 7.13e-18 78.6
MS.gene36323.t1 MTR_6g027290 29.032 155 102 3 123 273 12 162 1.46e-16 78.6
MS.gene36323.t1 MTR_2g451350 26.667 135 99 0 311 445 1 135 3.87e-15 73.6
MS.gene36323.t1 MTR_7g103340 41.176 102 55 1 121 222 51 147 7.02e-14 72.4
MS.gene36323.t1 MTR_1g105420 31.176 170 93 6 194 343 5 170 2.22e-13 70.5
MS.gene36323.t1 MTR_2g101730 54.545 66 17 2 725 790 19 71 1.48e-12 63.9
MS.gene36323.t1 MTR_2g030700 28.261 138 88 3 123 260 6 132 5.75e-12 65.1
MS.gene36323.t1 MTR_1g054285 36.842 114 68 1 107 220 127 236 6.24e-12 67.8
MS.gene36323.t1 MTR_4g100550 34.459 148 82 4 73 220 70 202 3.20e-11 65.5
MS.gene36323.t1 MTR_2g030680 30.328 122 74 3 139 260 22 132 3.74e-11 62.8
MS.gene36323.t1 MTR_5g014890 40.206 97 54 1 124 220 113 205 4.16e-11 64.7
MS.gene36323.t1 MTR_6g011610 37.500 112 57 2 111 222 82 180 7.01e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36323.t1 AT1G79840 62.403 774 258 10 21 789 1 746 0.0 958
MS.gene36323.t1 AT1G79840 61.441 791 272 10 4 789 13 775 0.0 953
MS.gene36323.t1 AT1G79840 64.438 703 230 7 92 789 1 688 0.0 919
MS.gene36323.t1 AT1G79840 64.438 703 230 7 92 789 1 688 0.0 919
MS.gene36323.t1 AT1G79840 62.404 649 211 10 21 664 1 621 0.0 796
MS.gene36323.t1 AT4G04890 43.056 720 363 11 106 790 33 740 0.0 620
MS.gene36323.t1 AT4G04890 43.056 720 363 11 106 790 33 740 0.0 620
MS.gene36323.t1 AT4G00730 44.160 702 352 11 111 788 116 801 0.0 610
MS.gene36323.t1 AT4G21750 43.217 715 343 11 128 788 55 760 0.0 609
MS.gene36323.t1 AT4G21750 43.217 715 343 11 128 788 55 760 0.0 609
MS.gene36323.t1 AT4G21750 43.217 715 343 11 128 788 55 760 0.0 609
MS.gene36323.t1 AT4G21750 43.217 715 343 11 128 788 55 760 0.0 609
MS.gene36323.t1 AT1G79840 60.377 530 177 10 21 545 1 502 0.0 607
MS.gene36323.t1 AT1G05230 42.938 708 354 10 106 788 35 717 0.0 603
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT1G05230 42.817 710 354 10 106 788 35 719 0.0 602
MS.gene36323.t1 AT3G61150 42.527 736 344 13 114 788 89 806 0.0 593
MS.gene36323.t1 AT1G05230 42.612 582 293 8 106 663 35 599 3.18e-166 494
MS.gene36323.t1 AT5G52170 40.374 696 356 14 106 785 26 678 2.93e-165 494
MS.gene36323.t1 AT5G52170 40.374 696 356 14 106 785 26 678 2.93e-165 494
MS.gene36323.t1 AT1G73360 39.372 701 360 17 134 786 31 714 1.02e-164 494
MS.gene36323.t1 AT5G52170 40.086 696 363 12 106 785 26 683 6.76e-164 491
MS.gene36323.t1 AT1G17920 38.796 714 372 16 107 787 2 683 9.74e-164 490
MS.gene36323.t1 AT1G17920 38.796 714 372 16 107 787 2 683 9.74e-164 490
MS.gene36323.t1 AT2G32370 40.058 694 366 14 121 788 54 723 1.72e-160 483
MS.gene36323.t1 AT5G46880 36.228 737 386 17 110 785 93 806 1.66e-149 458
MS.gene36323.t1 AT5G46880 36.228 737 386 17 110 785 93 806 1.66e-149 458
MS.gene36323.t1 AT5G46880 36.228 737 386 17 110 785 93 806 1.66e-149 458
MS.gene36323.t1 AT4G17710 37.895 665 350 16 135 785 88 703 3.43e-134 415
MS.gene36323.t1 AT3G03260 33.241 722 405 19 120 789 2 698 1.42e-124 389
MS.gene36323.t1 AT5G17320 32.650 732 415 17 116 788 6 718 1.51e-124 390
MS.gene36323.t1 AT4G00730 41.401 471 246 7 96 544 96 558 5.62e-120 373
MS.gene36323.t1 AT4G25530 33.286 697 421 15 107 788 18 685 8.45e-120 377
MS.gene36323.t1 AT1G34650 31.939 717 413 17 126 788 13 708 1.82e-105 340
MS.gene36323.t1 AT3G03260 32.305 551 324 14 120 635 2 538 1.10e-90 295
MS.gene36323.t1 AT5G07260 20.632 538 371 15 201 733 10 496 5.37e-29 122
MS.gene36323.t1 AT5G07260 20.664 542 371 16 201 733 10 501 9.49e-29 122
MS.gene36323.t1 AT4G32880 21.591 704 409 27 125 752 2 638 2.90e-27 119
MS.gene36323.t1 AT5G60690 23.629 529 295 22 138 636 25 474 7.02e-22 102
MS.gene36323.t1 AT1G30490 22.561 656 382 26 126 720 9 599 1.74e-21 100
MS.gene36323.t1 AT2G34710 20.946 740 427 27 128 785 15 678 2.73e-19 93.6
MS.gene36323.t1 AT4G26920 27.692 195 123 6 289 478 47 228 5.53e-16 82.0
MS.gene36323.t1 AT3G60390 39.623 106 58 2 118 222 146 246 5.02e-12 68.2
MS.gene36323.t1 AT4G16780 36.752 117 62 2 110 220 101 211 2.17e-11 65.9

Find 168 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGACTCCATTGTTAATT+TGG 0.153641 2.2:+1973420 None:intergenic
CTCCTAGGCAAGTCAAATTT+TGG 0.177736 2.2:-1977884 MS.gene36323:CDS
TGATTTGGGTACGACGATTT+TGG 0.178481 2.2:+1977859 None:intergenic
GTTAACAGTGGCCTAGCTTT+TGG 0.185982 2.2:-1974477 MS.gene36323:CDS
CCTTATTTATGGTCTCTCTT+AGG 0.207030 2.2:+1977660 None:intergenic
TTGGCTTTAAATAGGTAGTA+TGG 0.217597 2.2:-1974554 MS.gene36323:intron
TTCAAATTCATCCATTGATT+TGG 0.230510 2.2:+1979185 None:intergenic
ATCCAAATAATACCTTGATT+TGG 0.246631 2.2:+1977844 None:intergenic
GGGGCAACAAGCCTTATTTA+TGG 0.261801 2.2:+1977649 None:intergenic
AGAGAACATTAAAAGCTCTT+TGG 0.278926 2.2:-1976913 MS.gene36323:CDS
TTGAATGAACTACGCTCTTT+TGG 0.289603 2.2:+1974514 None:intergenic
GTTTCCATGTTTAATATCTA+AGG 0.290461 2.2:-1976448 MS.gene36323:CDS
GAGAGGCTCAGAGCAGCTTT+AGG 0.292971 2.2:-1976987 MS.gene36323:CDS
GAAGCTTCAATGGATATCTT+TGG 0.305668 2.2:+1976696 None:intergenic
GGGGAGGAAGGGAGTACAAT+AGG 0.308975 2.2:-1979258 MS.gene36323:CDS
GTTGTCTTCTACTTTATCTA+TGG 0.309040 2.2:+1974819 None:intergenic
CTTATTTATGGTCTCTCTTA+GGG 0.317095 2.2:+1977661 None:intergenic
TCCAAATAATACCTTGATTT+GGG 0.323701 2.2:+1977845 None:intergenic
TTTGTGCAGTTTCTTCTATA+TGG 0.329813 2.2:-1974089 MS.gene36323:CDS
CGGCATGGCAGTGCGGCGGC+GGG 0.333914 2.2:-1979324 MS.gene36323:CDS
CATAACCTCAGCTTTGAGTT+TGG 0.338433 2.2:+1977553 None:intergenic
TCGGCATGGCAGTGCGGCGG+CGG 0.345849 2.2:-1979325 MS.gene36323:CDS
CCTAAGAGAGACCATAAATA+AGG 0.350865 2.2:-1977660 MS.gene36323:CDS
GTGGTGGGGACCCCACAGTT+GGG 0.352837 2.2:+1977629 None:intergenic
TCCATTGATTTGGATTTAGT+TGG 0.361488 2.2:+1979195 None:intergenic
ATTGCCTCTGTCTTGTCCTT+TGG 0.362072 2.2:+1973858 None:intergenic
GGTAGTATGGGTGGAGCATT+TGG 0.373488 2.2:-1974541 MS.gene36323:CDS
GAAATTAGCAGCGAGTATTC+AGG 0.374487 2.2:-1979219 MS.gene36323:CDS
CAACAACTTAGCAAGCAATT+AGG 0.375310 2.2:-1977912 MS.gene36323:CDS
TGGAGAGGGAAAGAAATCTT+TGG 0.377424 2.2:+1979786 None:intergenic
GCATGGCAGTGCGGCGGCGG+GGG 0.379819 2.2:-1979322 MS.gene36323:CDS
GAGGTGGAAGAAGGGGAGGA+AGG 0.380425 2.2:-1979270 MS.gene36323:CDS
TGTGGTGGGGACCCCACAGT+TGG 0.383545 2.2:+1977628 None:intergenic
AAGAAATCAAACAAAACATT+AGG 0.391068 2.2:+1974054 None:intergenic
CTCACCGGTTGAATCCTTCA+TGG 0.395614 2.2:+1974383 None:intergenic
ACTAAGGTTACTAGTAAAAC+TGG 0.395797 2.2:-1974177 MS.gene36323:CDS
TTTCTGATGGCTTGGAATCA+AGG 0.397526 2.2:-1973540 MS.gene36323:CDS
TTCAATTGTTTCTGATGGCT+TGG 0.398938 2.2:-1973548 MS.gene36323:CDS
AGTAATATGGAGGTGGAAGA+AGG 0.401643 2.2:-1979279 MS.gene36323:CDS
GTGCTTCAAGCTTCCATACA+TGG 0.408093 2.2:-1974200 MS.gene36323:CDS
TCCTTTGGCTAAATTTGCAA+TGG 0.410560 2.2:+1973873 None:intergenic
AACAAAACATTAGGAGATAT+AGG 0.411699 2.2:+1974063 None:intergenic
AGAGGCTCAGAGCAGCTTTA+GGG 0.415023 2.2:-1976986 MS.gene36323:CDS
ACAAAATACACTTCTCTAGT+TGG 0.422278 2.2:+1974892 None:intergenic
TTATAAGCTCCTCCATTGCT+TGG 0.425119 2.2:+1976835 None:intergenic
TGAAAATCCTGAGGGCAGTA+TGG 0.428055 2.2:+1973567 None:intergenic
AGGTGGAAGAAGGGGAGGAA+GGG 0.430407 2.2:-1979269 MS.gene36323:CDS
TCTTGATGAGTCTAGGATAA+TGG 0.436756 2.2:-1976868 MS.gene36323:CDS
CTGTAGGAGAAGCATTTGTA+AGG 0.443396 2.2:+1973443 None:intergenic
TTAGGTGTTGCCACATTGGC+TGG 0.444708 2.2:-1974282 MS.gene36323:intron
TCTTTGGCTTTAGAAGTAGA+AGG 0.445289 2.2:+1979802 None:intergenic
TGTAGCTCTTGAAGCTTCAA+TGG 0.449255 2.2:+1976686 None:intergenic
CATGGCACCATCTCTGTTTG+TGG 0.450083 2.2:+1977610 None:intergenic
CCCATCTGGTTGCATTATTG+AGG 0.452497 2.2:-1974764 MS.gene36323:CDS
GGCATGGCAGTGCGGCGGCG+GGG 0.456497 2.2:-1979323 MS.gene36323:CDS
GTAATATGGAGGTGGAAGAA+GGG 0.456514 2.2:-1979278 MS.gene36323:CDS
TACGCACCTGTGGATATTAC+CGG 0.457137 2.2:-1973631 MS.gene36323:CDS
TGGTGGGGACCCCACAGTTG+GGG 0.457773 2.2:+1977630 None:intergenic
ACAAGTCTAAATTGTGAAGA+TGG 0.459079 2.2:-1973352 MS.gene36323:CDS
TGGATATCTTTGGTCTTCCA+TGG 0.461809 2.2:+1976706 None:intergenic
TCCAACTAAATCCAAATCAA+TGG 0.462181 2.2:-1979196 MS.gene36323:CDS
GCTTTAGGGAAATATGCATC+AGG 0.464608 2.2:-1976972 MS.gene36323:CDS
GACGTTCGCATTGAAGTTGA+AGG 0.466117 2.2:+1974433 None:intergenic
AAATGCAGAAAACGCCCATC+TGG 0.466193 2.2:-1974778 MS.gene36323:CDS
TAGTAACCTTAGTCCATGTA+TGG 0.466982 2.2:+1974187 None:intergenic
ATACGAACAAGAAGAAGAAA+AGG 0.473358 2.2:-1979104 MS.gene36323:CDS
CACAAATTCTTACGAATCAA+TGG 0.474074 2.2:-1973659 MS.gene36323:CDS
AGCAATTAGGCCTTGCTCCT+AGG 0.482251 2.2:-1977899 MS.gene36323:CDS
AAGCTTCCATACATGGACTA+AGG 0.482803 2.2:-1974193 MS.gene36323:CDS
CCTTTGGCTAAATTTGCAAT+GGG 0.483334 2.2:+1973874 None:intergenic
TTGTTGTTCTTCAGTTGCCA+TGG 0.487774 2.2:+1977592 None:intergenic
GCTAAGAGAGAGAGCTGGAG+AGG 0.488674 2.2:+1979771 None:intergenic
TAATATGGAGGTGGAAGAAG+GGG 0.489966 2.2:-1979277 MS.gene36323:CDS
ACTTCTCTAGTTGGAACCAT+TGG 0.492214 2.2:+1974901 None:intergenic
AATGATCCTAGTGAACCTCT+TGG 0.492403 2.2:-1974120 MS.gene36323:CDS
AGCTTGAAGCACTAATTGCT+TGG 0.493404 2.2:+1974211 None:intergenic
GTAAAACTGGAGAAGACATA+AGG 0.495014 2.2:-1974164 MS.gene36323:CDS
ATTGAAGCTTCAAGAGCTAC+AGG 0.495166 2.2:-1976684 MS.gene36323:CDS
ATTATTGAGGATAAGTCAAA+TGG 0.496385 2.2:-1974751 MS.gene36323:CDS
TGGCTTTAAATAGGTAGTAT+GGG 0.500533 2.2:-1974553 MS.gene36323:intron
AGGCTTGTTGCCCCAACTGT+GGG 0.503595 2.2:-1977640 MS.gene36323:CDS
CAGTGGGATATAATGTCTAA+TGG 0.509556 2.2:-1973910 MS.gene36323:CDS
GGTATTCAATCCGTGATGAC+CGG 0.513881 2.2:-1973610 MS.gene36323:CDS
AAATCAATGGATGAATTTGA+AGG 0.515118 2.2:-1979183 MS.gene36323:CDS
AATCAAAAGAAAACAATATG+TGG 0.518388 2.2:-1973699 MS.gene36323:CDS
CTTATAAAGATGGCTACAAT+GGG 0.520719 2.2:-1976819 MS.gene36323:CDS
TGGCTTGGAATCAAGGCAAA+TGG 0.525320 2.2:-1973533 MS.gene36323:CDS
TCCTCAATAATGCAACCAGA+TGG 0.528035 2.2:+1974763 None:intergenic
ATCAGAAATAGAGAAACTAA+AGG 0.529100 2.2:-1977696 MS.gene36323:CDS
AAATCGTCGTACCCAAATCA+AGG 0.531425 2.2:-1977856 MS.gene36323:intron
GCACCATCTCTGTTTGTGGT+GGG 0.532992 2.2:+1977614 None:intergenic
ATTTGACTTGCCTAGGAGCA+AGG 0.538411 2.2:+1977889 None:intergenic
AATGGAGGAGCTTATAAAGA+TGG 0.539273 2.2:-1976829 MS.gene36323:CDS
TCACCGGTTGAATCCTTCAT+GGG 0.540926 2.2:+1974384 None:intergenic
GCTTATAAAGATGGCTACAA+TGG 0.541887 2.2:-1976820 MS.gene36323:CDS
GGCACCATCTCTGTTTGTGG+TGG 0.543256 2.2:+1977613 None:intergenic
ATAGTTAAGTATTTCGCGAC+CGG 0.544385 2.2:+1976767 None:intergenic
GTTGCAAATGTTAACACCAA+TGG 0.544408 2.2:-1974917 MS.gene36323:CDS
TCCATTGTTAATTTGGCTGT+AGG 0.545967 2.2:+1973427 None:intergenic
GGCAACAAACGTTCCCATGA+AGG 0.546780 2.2:-1974397 MS.gene36323:CDS
GTTCCCATGAAGGATTCAAC+CGG 0.548611 2.2:-1974387 MS.gene36323:intron
AATGCCTTGCCCCAAAAGCT+AGG 0.549012 2.2:+1974466 None:intergenic
CGAATCACATCCGGTCATCA+CGG 0.551333 2.2:+1973600 None:intergenic
TAGATTGCTCGAATCACATC+CGG 0.551516 2.2:+1973591 None:intergenic
TAACTATGATGAATATATGA+AGG 0.554639 2.2:-1976751 MS.gene36323:CDS
GGGATATAATGTCTAATGGT+GGG 0.556948 2.2:-1973906 MS.gene36323:CDS
AACCAAAATTTGACTTGCCT+AGG 0.559734 2.2:+1977882 None:intergenic
GGCAAATGGTAATTACTTCG+AGG 0.560541 2.2:-1973519 MS.gene36323:CDS
AATCTAGCCATACTGCCCTC+AGG 0.562964 2.2:-1973574 MS.gene36323:CDS
CACCATCTCTGTTTGTGGTG+GGG 0.565022 2.2:+1977615 None:intergenic
GAGGAAGGGAGTACAATAGG+AGG 0.565183 2.2:-1979255 MS.gene36323:CDS
TGAATACCGGTAATATCCAC+AGG 0.566945 2.2:+1973625 None:intergenic
TATGGAGGTGGAAGAAGGGG+AGG 0.567505 2.2:-1979274 MS.gene36323:CDS
CCCATTGCAAATTTAGCCAA+AGG 0.567561 2.2:-1973874 MS.gene36323:CDS
AGAAAAGGAAGAAATATCAC+AGG 0.572043 2.2:-1979089 MS.gene36323:CDS
AATGGTAATTACTTCGAGGC+GGG 0.572459 2.2:-1973515 MS.gene36323:CDS
GGTCATCACGGATTGAATAC+CGG 0.575578 2.2:+1973612 None:intergenic
CCTCAATAATGCAACCAGAT+GGG 0.578551 2.2:+1974764 None:intergenic
GGATGTAGTAAACCAAGCAA+TGG 0.580722 2.2:-1976847 MS.gene36323:CDS
CTAAGAGAGAGAGCTGGAGA+GGG 0.582499 2.2:+1979772 None:intergenic
TTCTGAACAGATCAGAGTCA+TGG 0.585454 2.2:-1979061 MS.gene36323:CDS
TGGGATATAATGTCTAATGG+TGG 0.590022 2.2:-1973907 MS.gene36323:CDS
ACAAGGCTAAGAGAGAGAGC+TGG 0.592876 2.2:+1979766 None:intergenic
AAGGCTTGTTGCCCCAACTG+TGG 0.593522 2.2:-1977641 MS.gene36323:CDS
AATGTTAGGTGTTGCCACAT+TGG 0.596626 2.2:-1974286 MS.gene36323:intron
TCCTACAGCCAAATTAACAA+TGG 0.597793 2.2:-1973428 MS.gene36323:CDS
GCAGTTGAAAATTCAGACCA+TGG 0.602027 2.2:-1976723 MS.gene36323:CDS
TACAATAGGAGGTGAGCGTG+TGG 0.603598 2.2:-1979244 MS.gene36323:CDS
TTACAGCATCAAGAAAACAT+TGG 0.605442 2.2:+1976631 None:intergenic
TGATACATGTGTAGGTAGAG+AGG 0.607160 2.2:-1977004 MS.gene36323:intron
GACACTATATGCAAAGGAGA+AGG 0.607999 2.2:-1976414 MS.gene36323:CDS
TGTAGTAAACCAAGCAATGG+AGG 0.608774 2.2:-1976844 MS.gene36323:CDS
GATGAACTTGAAGATGATGA+AGG 0.609560 2.2:-1979159 MS.gene36323:CDS
AGAAAACATTGGACAATCCG+AGG 0.617408 2.2:+1976642 None:intergenic
GATGAAGGTGAAGATGATGA+AGG 0.621690 2.2:-1979144 MS.gene36323:CDS
AGAAACAATTGAAAATCCTG+AGG 0.621946 2.2:+1973558 None:intergenic
GGCTTGTTGCCCCAACTGTG+GGG 0.622702 2.2:-1977639 MS.gene36323:CDS
CACAAACAGAGATGGTGCCA+TGG 0.624428 2.2:-1977609 MS.gene36323:CDS
CAAATTAACAATGGAGTCTG+TGG 0.624759 2.2:-1973419 MS.gene36323:CDS
GAAACAATTGAAAATCCTGA+GGG 0.625241 2.2:+1973559 None:intergenic
ACGTTCGCATTGAAGTTGAA+GGG 0.628268 2.2:+1974434 None:intergenic
GTCCCCACCACAAACAGAGA+TGG 0.629482 2.2:-1977617 MS.gene36323:CDS
ATCAATCCAAGAGGTTCACT+AGG 0.631634 2.2:+1974114 None:intergenic
AATAGGAGGTGAGCGTGTGG+AGG 0.632405 2.2:-1979241 MS.gene36323:CDS
AGCTAGGCCACTGTTAACAA+TGG 0.632679 2.2:+1974482 None:intergenic
ACAGTTGACACTATATGCAA+AGG 0.638611 2.2:-1976420 MS.gene36323:CDS
TGGTTACGTAGCTTAGAGAC+CGG 0.638972 2.2:-1976786 MS.gene36323:CDS
AAATGCCAAACTCAAAGCTG+AGG 0.643784 2.2:-1977558 MS.gene36323:intron
TTGGCTTTAGAAGTAGAAGG+AGG 0.644576 2.2:+1979805 None:intergenic
CTTTAAATAGGTAGTATGGG+TGG 0.647600 2.2:-1974550 MS.gene36323:intron
GCTGCCTTAGATATTAAACA+TGG 0.649260 2.2:+1976444 None:intergenic
GCACAAACTATCAATCCAAG+AGG 0.652201 2.2:+1974105 None:intergenic
CACATCCTGATGAAAAGCAG+AGG 0.653751 2.2:-1977935 MS.gene36323:CDS
GATGATGAAGGTGATGGTGA+TGG 0.658053 2.2:-1979132 MS.gene36323:CDS
TCTAAGCTACGTAACCACAT+TGG 0.660378 2.2:+1976792 None:intergenic
AAATGGTAATTACTTCGAGG+CGG 0.664685 2.2:-1973516 MS.gene36323:CDS
GGATGAAACTCGTCGAACTG+AGG 0.665962 2.2:-1974028 MS.gene36323:intron
GGTGAAGATGATGAAGGTGA+TGG 0.672812 2.2:-1979138 MS.gene36323:CDS
CTTTAGGGAAATATGCATCA+GGG 0.674316 2.2:-1976971 MS.gene36323:CDS
AATGGTGGTATACGCACCTG+TGG 0.675541 2.2:-1973641 MS.gene36323:CDS
AGTTGGCACAAAGAATGACA+TGG 0.675595 2.2:-1974242 MS.gene36323:CDS
TCATGGCTAGTAGAACATGA+AGG 0.679848 2.2:+1976939 None:intergenic
TATCGCACCATTGTTAACAG+TGG 0.686666 2.2:-1974489 MS.gene36323:CDS
AAATTCTTACGAATCAATGG+TGG 0.698012 2.2:-1973656 MS.gene36323:CDS
TTAGCCAAAGGACAAGACAG+AGG 0.726395 2.2:-1973862 MS.gene36323:CDS
AGATACTGCAAACAGTTGAG+TGG 0.727191 2.2:-1974868 MS.gene36323:CDS
TCTGCACACATTGACAACGT+TGG 0.738320 2.2:+1979844 None:intergenic
CTACAATGGGTGAACCAATG+TGG 0.747796 2.2:-1976806 MS.gene36323:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTAATTTATGATAAAAATT+TGG - chr2.2:1974917-1974936 MS.gene36323:CDS 10.0%
!!! TTTTGATATTATTTTTATGA+AGG - chr2.2:1978617-1978636 MS.gene36323:intron 10.0%
!! AAAAAAAAAACTTACATGAA+TGG - chr2.2:1975254-1975273 MS.gene36323:intron 15.0%
!! AATATATTAATCAACAACAA+GGG + chr2.2:1976052-1976071 None:intergenic 15.0%
!! AATTAACAATTTAATCAACT+AGG - chr2.2:1974983-1975002 MS.gene36323:intron 15.0%
!! AGTATAACTATATTAATCAA+AGG + chr2.2:1974613-1974632 None:intergenic 15.0%
!! ATTAACAATTTAATCAACTA+GGG - chr2.2:1974984-1975003 MS.gene36323:intron 15.0%
!! TATCATGTTACTAATTTAAA+AGG - chr2.2:1974434-1974453 MS.gene36323:CDS 15.0%
!! TGAAGAAAAAGAAATTTAAT+TGG + chr2.2:1974729-1974748 None:intergenic 15.0%
!! TTAAAAATTAGTTCATTAGA+TGG + chr2.2:1973845-1973864 None:intergenic 15.0%
!! TTTAAAAAATGAGGTAATAT+GGG - chr2.2:1975889-1975908 MS.gene36323:intron 15.0%
!!! AAAAAATATTAAGTTGATTG+TGG - chr2.2:1977509-1977528 MS.gene36323:intron 15.0%
!!! AAAACATTGAATAGTTTTAA+AGG + chr2.2:1975973-1975992 None:intergenic 15.0%
!!! AATTAATGAATTTCTTTTAC+GGG - chr2.2:1976956-1976975 MS.gene36323:CDS 15.0%
!!! AGTATAATTTTTTTTTCCAA+TGG + chr2.2:1975762-1975781 None:intergenic 15.0%
!!! ATCAAAAGAATTTTACATAT+AGG + chr2.2:1978604-1978623 None:intergenic 15.0%
!!! ATTTTGTATATGAATTTAGA+GGG - chr2.2:1979284-1979303 MS.gene36323:CDS 15.0%
!!! CAAAATATCTTTAAAAAATG+AGG - chr2.2:1975880-1975899 MS.gene36323:intron 15.0%
!!! GAATTAATGAATTTCTTTTA+CGG - chr2.2:1976955-1976974 MS.gene36323:CDS 15.0%
!!! GGAAAATAATAGATTTTTAT+TGG - chr2.2:1975910-1975929 MS.gene36323:intron 15.0%
!!! TAATGAACTAATTTTTAAGT+TGG - chr2.2:1973847-1973866 MS.gene36323:CDS 15.0%
!!! TATTTTGTATATGAATTTAG+AGG - chr2.2:1979283-1979302 MS.gene36323:CDS 15.0%
!!! TTGAATATTGATTTTTCTTT+TGG - chr2.2:1978673-1978692 MS.gene36323:intron 15.0%
!! AAAAACAAAAATTTGACTAG+AGG + chr2.2:1973622-1973641 None:intergenic 20.0%
!! AAAACAAAAAACTAATCAAG+TGG + chr2.2:1975084-1975103 None:intergenic 20.0%
!! AAACTACTAGTTAAGAAAAA+TGG + chr2.2:1976075-1976094 None:intergenic 20.0%
!! AAGAAATCAAACAAAACATT+AGG + chr2.2:1979195-1979214 None:intergenic 20.0%
!! AAGAAATTCATTAATTCAGT+AGG + chr2.2:1976952-1976971 None:intergenic 20.0%
!! AATCAAAAGAAAACAATATG+TGG - chr2.2:1979547-1979566 MS.gene36323:intron 20.0%
!! ATAATTCTTAATTTACTCAC+CGG + chr2.2:1978881-1978900 None:intergenic 20.0%
!! ATCTTTGATATTGAATTAGA+TGG - chr2.2:1976925-1976944 MS.gene36323:CDS 20.0%
!! ATGTACTATTATTATTGGTA+AGG - chr2.2:1975026-1975045 MS.gene36323:intron 20.0%
!! ATTCATATACAAAATATCTC+AGG + chr2.2:1979279-1979298 None:intergenic 20.0%
!! CATACATTATGTAACAAAAA+TGG + chr2.2:1978567-1978586 None:intergenic 20.0%
!! GAATATATTAATCAACAACA+AGG + chr2.2:1976053-1976072 None:intergenic 20.0%
!! TAACTATGATGAATATATGA+AGG - chr2.2:1976495-1976514 MS.gene36323:intron 20.0%
!! TCTTCAAAGTTAGTATATAT+AGG - chr2.2:1974743-1974762 MS.gene36323:CDS 20.0%
!! TCTTTGATATTGAATTAGAT+GGG - chr2.2:1976926-1976945 MS.gene36323:CDS 20.0%
!! TTCATTAACTAATCAATAGT+TGG + chr2.2:1977196-1977215 None:intergenic 20.0%
!! TTGAATCACTATATTAAACT+CGG + chr2.2:1979246-1979265 None:intergenic 20.0%
!! TTTAAACTTTAGTAACACTT+TGG - chr2.2:1977689-1977708 MS.gene36323:CDS 20.0%
!!! AGAATAGAATTTTCAAACAT+AGG + chr2.2:1977460-1977479 None:intergenic 20.0%
!!! ATATGCTTTTGATTATAGTA+TGG - chr2.2:1977539-1977558 MS.gene36323:intron 20.0%
!!! CAGTTTTATAAAGTTGATTT+AGG - chr2.2:1978034-1978053 MS.gene36323:intron 20.0%
!!! CATTTTTGTTACATAATGTA+TGG - chr2.2:1978565-1978584 MS.gene36323:intron 20.0%
!!! CTTTAAAAAATGAGGTAATA+TGG - chr2.2:1975888-1975907 MS.gene36323:intron 20.0%
!!! TAATGTTGTAAATGTTTTAG+TGG - chr2.2:1977479-1977498 MS.gene36323:intron 20.0%
!!! TTCATAATGTCTTTTTTGAT+AGG + chr2.2:1977155-1977174 None:intergenic 20.0%
!!! TTTTGTATATGAATTTAGAG+GGG - chr2.2:1979285-1979304 MS.gene36323:CDS 20.0%
!!! TTTTTCTTTTGGCTTTAAAT+AGG - chr2.2:1978684-1978703 MS.gene36323:intron 20.0%
! AAATCAATGGATGAATTTGA+AGG - chr2.2:1974063-1974082 MS.gene36323:CDS 25.0%
! AACAAAACATTAGGAGATAT+AGG + chr2.2:1979186-1979205 None:intergenic 25.0%
! AATGGTGAATGTAATATTGT+AGG - chr2.2:1975272-1975291 MS.gene36323:intron 25.0%
! AATTGTCATCCAAACAAAAT+AGG + chr2.2:1974264-1974283 None:intergenic 25.0%
! ACAACTATACATATAGAATG+AGG - chr2.2:1978109-1978128 MS.gene36323:intron 25.0%
! ACAATAATCATTATGACAGT+GGG - chr2.2:1979320-1979339 MS.gene36323:CDS 25.0%
! ACTAACCTTAACTTTGTATT+TGG - chr2.2:1978286-1978305 MS.gene36323:intron 25.0%
! AGTGATGAAAACAAAATGTT+AGG - chr2.2:1978946-1978965 MS.gene36323:intron 25.0%
! ATAATGTATGGAGCATAATT+TGG - chr2.2:1978577-1978596 MS.gene36323:intron 25.0%
! ATCAGAAATAGAGAAACTAA+AGG - chr2.2:1975550-1975569 MS.gene36323:intron 25.0%
! ATCCAAATAATACCTTGATT+TGG + chr2.2:1975405-1975424 None:intergenic 25.0%
! ATTATTGAGGATAAGTCAAA+TGG - chr2.2:1978495-1978514 MS.gene36323:intron 25.0%
! CATACATGGATTTATTGATA+TGG - chr2.2:1977355-1977374 MS.gene36323:intron 25.0%
! GAGAACAATATATGTATTGT+CGG - chr2.2:1975791-1975810 MS.gene36323:intron 25.0%
! GTTAAACTTCTACAAACAAA+AGG + chr2.2:1976732-1976751 None:intergenic 25.0%
! GTTTCCATGTTTAATATCTA+AGG - chr2.2:1976798-1976817 MS.gene36323:CDS 25.0%
! TCCAAATAATACCTTGATTT+GGG + chr2.2:1975404-1975423 None:intergenic 25.0%
! TCTGTGAAATAGATAAGTAA+AGG + chr2.2:1977627-1977646 None:intergenic 25.0%
! TCTTAAAAATTACTCTAGAC+CGG - chr2.2:1976996-1977015 MS.gene36323:intron 25.0%
! TGAATATTGAGTAACTTACT+TGG + chr2.2:1979425-1979444 None:intergenic 25.0%
! TGAGCATGTACTATTATTAT+TGG - chr2.2:1975021-1975040 MS.gene36323:intron 25.0%
! TGTATTTAATCCAAAGTAGA+TGG + chr2.2:1978079-1978098 None:intergenic 25.0%
! TTAATTTACGATCAAAACTG+TGG + chr2.2:1974964-1974983 None:intergenic 25.0%
! TTCAATTCTTATAAGTAGAG+TGG + chr2.2:1975190-1975209 None:intergenic 25.0%
! TTGATTTAATTGTCTGCAAA+GGG + chr2.2:1979533-1979552 None:intergenic 25.0%
! TTGTGGTATATTTATTGAAG+AGG - chr2.2:1975125-1975144 MS.gene36323:intron 25.0%
! TTTGCATTATTAAACACCAT+TGG - chr2.2:1975159-1975178 MS.gene36323:intron 25.0%
!! AAATCTAAAACCATCTACTT+TGG - chr2.2:1978066-1978085 MS.gene36323:intron 25.0%
!! CAACTTCTAAGAAAAATAAG+AGG - chr2.2:1979495-1979514 MS.gene36323:intron 25.0%
!! GAATCATAATTTGTCATGAA+GGG + chr2.2:1977766-1977785 None:intergenic 25.0%
!! GATTTTTATACTGGAACTTT+TGG - chr2.2:1976355-1976374 MS.gene36323:intron 25.0%
!! TTCAAATTCATCCATTGATT+TGG + chr2.2:1974064-1974083 None:intergenic 25.0%
!! TTTGATTTAATTGTCTGCAA+AGG + chr2.2:1979534-1979553 None:intergenic 25.0%
!!! AACTATTTTTGCAGAATCAA+TGG - chr2.2:1976767-1976786 MS.gene36323:CDS 25.0%
!!! AAGAAAAAGCATTTTGAAGT+TGG - chr2.2:1978987-1979006 MS.gene36323:intron 25.0%
!!! AAGTAGATGGTTTTAGATTT+TGG + chr2.2:1978066-1978085 None:intergenic 25.0%
!!! AAGTTCTTTAAAGTGATATG+TGG + chr2.2:1974307-1974326 None:intergenic 25.0%
!!! AGAGTAATTTTTAAGAATCG+TGG + chr2.2:1976992-1977011 None:intergenic 25.0%
!!! ATCTTTCTTTTTAGAAGTGA+AGG - chr2.2:1977581-1977600 MS.gene36323:CDS 25.0%
!!! ATGTTTTGTTTGATTTCTTG+AGG - chr2.2:1979196-1979215 MS.gene36323:CDS 25.0%
!!! CTCTTATTTTTCTTAGAAGT+TGG + chr2.2:1979497-1979516 None:intergenic 25.0%
!!! GAGTAATTTTTAAGAATCGT+GGG + chr2.2:1976991-1977010 None:intergenic 25.0%
!!! TATAAAACTGACTTGTAAAG+TGG + chr2.2:1978024-1978043 None:intergenic 25.0%
!!! TCACTTTTTAATTACACCAT+TGG - chr2.2:1975743-1975762 MS.gene36323:intron 25.0%
!!! TGTAAGTTTTTTAAGTGCAT+AGG - chr2.2:1974686-1974705 MS.gene36323:intron 25.0%
!!! TGTTTTGTTTGATTTCTTGA+GGG - chr2.2:1979197-1979216 MS.gene36323:CDS 25.0%
!!! TTTTAAAAATTACACCCACT+CGG + chr2.2:1977111-1977130 None:intergenic 25.0%
!!! TTTTTTTCTTTGCTCTAATC+AGG - chr2.2:1973888-1973907 MS.gene36323:CDS 25.0%
AAAACTAATCAAGTGGTAAG+TGG + chr2.2:1975077-1975096 None:intergenic 30.0%
AAACTAATCAAGTGGTAAGT+GGG + chr2.2:1975076-1975095 None:intergenic 30.0%
AAAGTTTGATCAAGATCGAA+TGG + chr2.2:1977920-1977939 None:intergenic 30.0%
AAATTCTTACGAATCAATGG+TGG - chr2.2:1979590-1979609 MS.gene36323:intron 30.0%
AAGTGACACATATGTCATTA+GGG - chr2.2:1973764-1973783 MS.gene36323:intron 30.0%
ACAAAATACACTTCTCTAGT+TGG + chr2.2:1978357-1978376 None:intergenic 30.0%
ACAAGTCTAAATTGTGAAGA+TGG - chr2.2:1979894-1979913 MS.gene36323:CDS 30.0%
ACGTACCAAATACAAAGTTA+AGG + chr2.2:1978294-1978313 None:intergenic 30.0%
ACTAAGGTTACTAGTAAAAC+TGG - chr2.2:1979069-1979088 MS.gene36323:CDS 30.0%
AGAAAAGGAAGAAATATCAC+AGG - chr2.2:1974157-1974176 MS.gene36323:CDS 30.0%
AGAAACAATTGAAAATCCTG+AGG + chr2.2:1979691-1979710 None:intergenic 30.0%
AGAGAACATTAAAAGCTCTT+TGG - chr2.2:1976333-1976352 MS.gene36323:intron 30.0%
AGAGCATATACTACATAACT+TGG - chr2.2:1978248-1978267 MS.gene36323:intron 30.0%
AGCAAATGAAACATAAAACG+AGG + chr2.2:1973694-1973713 None:intergenic 30.0%
AGTTATAGTTAGGACTTACA+AGG + chr2.2:1973500-1973519 None:intergenic 30.0%
ATACGAACAAGAAGAAGAAA+AGG - chr2.2:1974142-1974161 MS.gene36323:CDS 30.0%
CACAAATTCTTACGAATCAA+TGG - chr2.2:1979587-1979606 MS.gene36323:intron 30.0%
CATTATTAAACACCATTGGT+TGG - chr2.2:1975163-1975182 MS.gene36323:intron 30.0%
CTTATAAAGATGGCTACAAT+GGG - chr2.2:1976427-1976446 MS.gene36323:CDS 30.0%
CTTATTTATGGTCTCTCTTA+GGG + chr2.2:1975588-1975607 None:intergenic 30.0%
GAAACAATTGAAAATCCTGA+GGG + chr2.2:1979690-1979709 None:intergenic 30.0%
GAAGAGAGTTAGTTATAGTT+AGG + chr2.2:1973510-1973529 None:intergenic 30.0%
GAAGATGGAAATAGAAACAA+AGG - chr2.2:1978161-1978180 MS.gene36323:intron 30.0%
GAATGGTTAGGATTTATGTT+CGG + chr2.2:1977903-1977922 None:intergenic 30.0%
GACAATAATCATTATGACAG+TGG - chr2.2:1979319-1979338 MS.gene36323:CDS 30.0%
GAGATGAATTAGACAAGATA+TGG + chr2.2:1977729-1977748 None:intergenic 30.0%
GATATGTGGTACTATTATGA+AGG + chr2.2:1974293-1974312 None:intergenic 30.0%
GATATTACTCATATGGTTCA+AGG + chr2.2:1976680-1976699 None:intergenic 30.0%
GATTTCATAAAACCTTATGC+AGG - chr2.2:1977217-1977236 MS.gene36323:intron 30.0%
GTGCAATGATATTACTCATA+TGG + chr2.2:1976687-1976706 None:intergenic 30.0%
GTTGTCTTCTACTTTATCTA+TGG + chr2.2:1978430-1978449 None:intergenic 30.0%
TACACACCACTTATAAGTAA+TGG + chr2.2:1977993-1978012 None:intergenic 30.0%
TATAAACTACGCAAATCACA+TGG + chr2.2:1974769-1974788 None:intergenic 30.0%
TATACCACAATCTTATCAGT+AGG + chr2.2:1975115-1975134 None:intergenic 30.0%
TATTAAGCTAGCTAGTATAG+CGG - chr2.2:1976019-1976038 MS.gene36323:intron 30.0%
TCCAACTAAATCCAAATCAA+TGG - chr2.2:1974050-1974069 MS.gene36323:CDS 30.0%
TCTTGTCTAATTCATCTCAT+TGG - chr2.2:1977731-1977750 MS.gene36323:CDS 30.0%
TGACAAATTATGATTCCATG+CGG - chr2.2:1977770-1977789 MS.gene36323:intron 30.0%
TGACAAGCAAAAGAAAATGA+TGG - chr2.2:1977409-1977428 MS.gene36323:intron 30.0%
TTAAAGGATATGTGCATTGT+CGG + chr2.2:1975957-1975976 None:intergenic 30.0%
TTACAGCATCAAGAAAACAT+TGG + chr2.2:1976618-1976637 None:intergenic 30.0%
TTTGTGCAGTTTCTTCTATA+TGG - chr2.2:1979157-1979176 MS.gene36323:CDS 30.0%
! AAGAGCTTTTAATGTTCTCT+TGG + chr2.2:1976333-1976352 None:intergenic 30.0%
! AATGTTTCAAGTAGATAGCT+CGG + chr2.2:1973667-1973686 None:intergenic 30.0%
! ACCCAAATCAAGGTATTATT+TGG - chr2.2:1975400-1975419 MS.gene36323:intron 30.0%
! AGCTCTTTGGATTTTTATAC+TGG - chr2.2:1976346-1976365 MS.gene36323:intron 30.0%
! ATTTATTGAAGAGGTGTACT+TGG - chr2.2:1975134-1975153 MS.gene36323:intron 30.0%
! ATTTTTGCAGAATCAATGGA+AGG - chr2.2:1976771-1976790 MS.gene36323:CDS 30.0%
! GGAATCATAATTTGTCATGA+AGG + chr2.2:1977767-1977786 None:intergenic 30.0%
! GTACTTATGTTGCATTTTTC+AGG - chr2.2:1975493-1975512 MS.gene36323:intron 30.0%
! TTTCTTGCTGTAAATCTGAA+AGG - chr2.2:1977325-1977344 MS.gene36323:intron 30.0%
! TTTCTTTTGCTTGTCATGTT+TGG + chr2.2:1977405-1977424 None:intergenic 30.0%
! TTTTAATGTTCTCTTGGTCA+TGG + chr2.2:1976327-1976346 None:intergenic 30.0%
! TTTTCCAACGATAAATACTG+TGG - chr2.2:1978219-1978238 MS.gene36323:intron 30.0%
!! CTTTTGATTGATACATGTGT+AGG - chr2.2:1976234-1976253 MS.gene36323:intron 30.0%
!! TCCATTGATTTGGATTTAGT+TGG + chr2.2:1974054-1974073 None:intergenic 30.0%
!! TGGCTTTAAATAGGTAGTAT+GGG - chr2.2:1978693-1978712 MS.gene36323:intron 30.0%
!! TTGGCTTTAAATAGGTAGTA+TGG - chr2.2:1978692-1978711 MS.gene36323:intron 30.0%
!! TTTTTAAGGAGCAAAAGCAA+TGG + chr2.2:1973360-1973379 None:intergenic 30.0%
!!! GAAGTGTGTTGTGTTTTTTA+AGG + chr2.2:1973374-1973393 None:intergenic 30.0%
!!! GATGGTTTTAGATTTTGGAT+TGG + chr2.2:1978061-1978080 None:intergenic 30.0%
!!! GGATTTTCAATTGTTTCTGA+TGG - chr2.2:1979693-1979712 MS.gene36323:intron 30.0%
AAAAAACAGCCTGTCTGAAT+AGG - chr2.2:1977080-1977099 MS.gene36323:intron 35.0%
AAATGGTAATTACTTCGAGG+CGG - chr2.2:1979730-1979749 MS.gene36323:intron 35.0%
AACAGTTGAGTGGTGAAAAA+TGG - chr2.2:1978388-1978407 MS.gene36323:intron 35.0%
AACTAATCAAGTGGTAAGTG+GGG + chr2.2:1975075-1975094 None:intergenic 35.0%
AATGCCTACTGATAAGATTG+TGG - chr2.2:1975108-1975127 MS.gene36323:intron 35.0%
AATGGAGGAGCTTATAAAGA+TGG - chr2.2:1976417-1976436 MS.gene36323:CDS 35.0%
AATTCTCAATAGCACACTCA+CGG + chr2.2:1974484-1974503 None:intergenic 35.0%
ACACCACTTATAAGTAATGG+AGG + chr2.2:1977990-1978009 None:intergenic 35.0%
ACAGTTGACACTATATGCAA+AGG - chr2.2:1976826-1976845 MS.gene36323:CDS 35.0%
ACAGTTGAGTGGTGAAAAAT+GGG - chr2.2:1978389-1978408 MS.gene36323:intron 35.0%
AGAAACCAAGACAGACAATA+TGG + chr2.2:1974581-1974600 None:intergenic 35.0%
ATAGTTAAGTATTTCGCGAC+CGG + chr2.2:1976482-1976501 None:intergenic 35.0%
ATTACGACATGCAGAAATTG+TGG + chr2.2:1975852-1975871 None:intergenic 35.0%
CAAAAAAACACCGTTCTTCT+CGG - chr2.2:1977036-1977055 MS.gene36323:intron 35.0%
CAAATTAACAATGGAGTCTG+TGG - chr2.2:1979827-1979846 MS.gene36323:CDS 35.0%
CAACAACTTAGCAAGCAATT+AGG - chr2.2:1975334-1975353 MS.gene36323:intron 35.0%
CAAGTGACACATATGTCATT+AGG - chr2.2:1973763-1973782 MS.gene36323:intron 35.0%
CAATTTACCATTCCTGCATA+AGG + chr2.2:1977232-1977251 None:intergenic 35.0%
CACAGACTCCATTGTTAATT+TGG + chr2.2:1979829-1979848 None:intergenic 35.0%
CAGTGGGATATAATGTCTAA+TGG - chr2.2:1979336-1979355 MS.gene36323:CDS 35.0%
CAGTTTACAAATCACGCAAT+CGG + chr2.2:1977952-1977971 None:intergenic 35.0%
CATAAAACCTTATGCAGGAA+TGG - chr2.2:1977222-1977241 MS.gene36323:intron 35.0%
CCTAAGAGAGACCATAAATA+AGG - chr2.2:1975586-1975605 MS.gene36323:intron 35.0%
CCTTTGGCTAAATTTGCAAT+GGG + chr2.2:1979375-1979394 None:intergenic 35.0%
CTTTAAATAGGTAGTATGGG+TGG - chr2.2:1978696-1978715 MS.gene36323:intron 35.0%
GAAGAGAAAAATACAGAAGG+AGG - chr2.2:1979753-1979772 MS.gene36323:intron 35.0%
GAAGCTTCAATGGATATCTT+TGG + chr2.2:1976553-1976572 None:intergenic 35.0%
GATCTTGATCAAACTTTCAC+TGG - chr2.2:1977923-1977942 MS.gene36323:CDS 35.0%
GATGAACTTGAAGATGATGA+AGG - chr2.2:1974087-1974106 MS.gene36323:CDS 35.0%
GATTACCATATTGTCTGTCT+TGG - chr2.2:1974573-1974592 MS.gene36323:intron 35.0%
GCTGCCTTAGATATTAAACA+TGG + chr2.2:1976805-1976824 None:intergenic 35.0%
GCTTATAAAGATGGCTACAA+TGG - chr2.2:1976426-1976445 MS.gene36323:CDS 35.0%
GGAAATAGAAACAAAGGTAG+AGG - chr2.2:1978167-1978186 MS.gene36323:intron 35.0%
GGGATATAATGTCTAATGGT+GGG - chr2.2:1979340-1979359 MS.gene36323:intron 35.0%
GTAAAACTGGAGAAGACATA+AGG - chr2.2:1979082-1979101 MS.gene36323:CDS 35.0%
GTTGCAAATGTTAACACCAA+TGG - chr2.2:1978329-1978348 MS.gene36323:intron 35.0%
TAGTAACCTTAGTCCATGTA+TGG + chr2.2:1979062-1979081 None:intergenic 35.0%
TCCTACAGCCAAATTAACAA+TGG - chr2.2:1979818-1979837 MS.gene36323:CDS 35.0%
TCCTTTGGCTAAATTTGCAA+TGG + chr2.2:1979376-1979395 None:intergenic 35.0%
TGAAAGGAACAGTTCATACA+TGG - chr2.2:1977341-1977360 MS.gene36323:intron 35.0%
TGGGATATAATGTCTAATGG+TGG - chr2.2:1979339-1979358 MS.gene36323:CDS 35.0%
TTAGACAAGATATGGATGAG+AGG + chr2.2:1977721-1977740 None:intergenic 35.0%
TTGATCAAGATCGAATGGTT+AGG + chr2.2:1977915-1977934 None:intergenic 35.0%
TTGTAAACTGCAGCAAATTG+CGG - chr2.2:1977962-1977981 MS.gene36323:intron 35.0%
! ATTCGTGTGCCTATTTTGTT+TGG - chr2.2:1974252-1974271 MS.gene36323:CDS 35.0%
! CACCACTTATAAGTAATGGA+GGG + chr2.2:1977989-1978008 None:intergenic 35.0%
! CCTTATTTATGGTCTCTCTT+AGG + chr2.2:1975589-1975608 None:intergenic 35.0%
! CTTTAGGGAAATATGCATCA+GGG - chr2.2:1976275-1976294 MS.gene36323:intron 35.0%
! GGAGAAGGTTCTAACAAAAA+TGG - chr2.2:1976847-1976866 MS.gene36323:CDS 35.0%
! GTTGGTGAGTTAAAAACAAC+GGG + chr2.2:1973645-1973664 None:intergenic 35.0%
! TCCATTGTTAATTTGGCTGT+AGG + chr2.2:1979822-1979841 None:intergenic 35.0%
! TCTTGATGAGTCTAGGATAA+TGG - chr2.2:1976378-1976397 MS.gene36323:intron 35.0%
! TTGAATGAACTACGCTCTTT+TGG + chr2.2:1978735-1978754 None:intergenic 35.0%
! TTTTCTTTGCTCTAATCAGG+CGG - chr2.2:1973891-1973910 MS.gene36323:CDS 35.0%
!! AAAACTGACTTGTAAAGTGG+CGG + chr2.2:1978021-1978040 None:intergenic 35.0%
!! AACCAAAATTTGACTTGCCT+AGG + chr2.2:1975367-1975386 None:intergenic 35.0%
!! AGGAGGGAGTTTTAGTAATA+TGG - chr2.2:1973954-1973973 MS.gene36323:intron 35.0%
!! AGGGAGTTTTAGTAATATGG+AGG - chr2.2:1973957-1973976 MS.gene36323:intron 35.0%
!! GAGTTTTAGTAATATGGAGG+TGG - chr2.2:1973960-1973979 MS.gene36323:intron 35.0%
!! GGTTGGTGAGTTAAAAACAA+CGG + chr2.2:1973646-1973665 None:intergenic 35.0%
!! GTAGAGGAAATTCTAAGATG+TGG - chr2.2:1978183-1978202 MS.gene36323:intron 35.0%
!! TCTTTGGCTTTAGAAGTAGA+AGG + chr2.2:1973447-1973466 None:intergenic 35.0%
!! TTCAATTGTTTCTGATGGCT+TGG - chr2.2:1979698-1979717 MS.gene36323:intron 35.0%
!!! TTGTTTTTGCAGATCTTCCT+CGG - chr2.2:1976587-1976606 MS.gene36323:intron 35.0%
AAATCGTCGTACCCAAATCA+AGG - chr2.2:1975390-1975409 MS.gene36323:intron 40.0%
AAATGCCAAACTCAAAGCTG+AGG - chr2.2:1975688-1975707 MS.gene36323:intron 40.0%
AATGATCCTAGTGAACCTCT+TGG - chr2.2:1979126-1979145 MS.gene36323:CDS 40.0%
AATGGTAATTACTTCGAGGC+GGG - chr2.2:1979731-1979750 MS.gene36323:intron 40.0%
ACGTTCGCATTGAAGTTGAA+GGG + chr2.2:1978815-1978834 None:intergenic 40.0%
ACTGTGCAGGTTAAGATAGT+AGG + chr2.2:1974546-1974565 None:intergenic 40.0%
ACTTCTCTAGTTGGAACCAT+TGG + chr2.2:1978348-1978367 None:intergenic 40.0%
AGAAAACATTGGACAATCCG+AGG + chr2.2:1976607-1976626 None:intergenic 40.0%
AGATACTGCAAACAGTTGAG+TGG - chr2.2:1978378-1978397 MS.gene36323:intron 40.0%
AGGCAGTAACATTTATCCCA+TGG - chr2.2:1978129-1978148 MS.gene36323:intron 40.0%
AGTAATATGGAGGTGGAAGA+AGG - chr2.2:1973967-1973986 MS.gene36323:intron 40.0%
AGTTGGCACAAAGAATGACA+TGG - chr2.2:1979004-1979023 MS.gene36323:intron 40.0%
ATCAATCCAAGAGGTTCACT+AGG + chr2.2:1979135-1979154 None:intergenic 40.0%
ATGAGTGAATCCGAGAAGAA+CGG + chr2.2:1977049-1977068 None:intergenic 40.0%
ATTCTCAATAGCACACTCAC+GGG + chr2.2:1974483-1974502 None:intergenic 40.0%
ATTGAAGCTTCAAGAGCTAC+AGG - chr2.2:1976562-1976581 MS.gene36323:intron 40.0%
CAAAATAGGCACACGAATAG+AGG + chr2.2:1974250-1974269 None:intergenic 40.0%
CCCATTGCAAATTTAGCCAA+AGG - chr2.2:1979372-1979391 MS.gene36323:intron 40.0%
CCTCAATAATGCAACCAGAT+GGG + chr2.2:1978485-1978504 None:intergenic 40.0%
CGGGAAGAGAAAAATACAGA+AGG - chr2.2:1979750-1979769 MS.gene36323:intron 40.0%
CTAGACGATCCAATCAAGAT+TGG + chr2.2:1977840-1977859 None:intergenic 40.0%
CTGAATAGGTAAATCCGAGT+GGG - chr2.2:1977094-1977113 MS.gene36323:intron 40.0%
CTTCTGTTAGAGTCTCACAT+CGG - chr2.2:1973724-1973743 MS.gene36323:intron 40.0%
GAAATTAGCAGCGAGTATTC+AGG - chr2.2:1974027-1974046 MS.gene36323:intron 40.0%
GACACTATATGCAAAGGAGA+AGG - chr2.2:1976832-1976851 MS.gene36323:CDS 40.0%
GATGAAGGTGAAGATGATGA+AGG - chr2.2:1974102-1974121 MS.gene36323:CDS 40.0%
GCACAAACTATCAATCCAAG+AGG + chr2.2:1979144-1979163 None:intergenic 40.0%
GCAGTTGAAAATTCAGACCA+TGG - chr2.2:1976523-1976542 MS.gene36323:intron 40.0%
GGATGTAGTAAACCAAGCAA+TGG - chr2.2:1976399-1976418 MS.gene36323:CDS 40.0%
GGCAAATGGTAATTACTTCG+AGG - chr2.2:1979727-1979746 MS.gene36323:intron 40.0%
GTAATATGGAGGTGGAAGAA+GGG - chr2.2:1973968-1973987 MS.gene36323:intron 40.0%
GTCCCTCCATTACTTATAAG+TGG - chr2.2:1977984-1978003 MS.gene36323:intron 40.0%
GTGCATAGGTCACTAATTTG+AGG - chr2.2:1974700-1974719 MS.gene36323:intron 40.0%
TAATATGGAGGTGGAAGAAG+GGG - chr2.2:1973969-1973988 MS.gene36323:intron 40.0%
TAGATTGCTCGAATCACATC+CGG + chr2.2:1979658-1979677 None:intergenic 40.0%
TATCGCACCATTGTTAACAG+TGG - chr2.2:1978757-1978776 MS.gene36323:intron 40.0%
TCATGGCTAGTAGAACATGA+AGG + chr2.2:1976310-1976329 None:intergenic 40.0%
TCCAACGATAAATACTGTGG+AGG - chr2.2:1978222-1978241 MS.gene36323:intron 40.0%
TCCTCAATAATGCAACCAGA+TGG + chr2.2:1978486-1978505 None:intergenic 40.0%
TCGGATTTACCTATTCAGAC+AGG + chr2.2:1977092-1977111 None:intergenic 40.0%
TCTAAGCTACGTAACCACAT+TGG + chr2.2:1976457-1976476 None:intergenic 40.0%
TCTGAATAGGTAAATCCGAG+TGG - chr2.2:1977093-1977112 MS.gene36323:intron 40.0%
TGAATACCGGTAATATCCAC+AGG + chr2.2:1979624-1979643 None:intergenic 40.0%
TGATACATGTGTAGGTAGAG+AGG - chr2.2:1976242-1976261 MS.gene36323:intron 40.0%
TGGAGAGGGAAAGAAATCTT+TGG + chr2.2:1973463-1973482 None:intergenic 40.0%
TGTAGCTCTTGAAGCTTCAA+TGG + chr2.2:1976563-1976582 None:intergenic 40.0%
TGTAGTAAACCAAGCAATGG+AGG - chr2.2:1976402-1976421 MS.gene36323:CDS 40.0%
TGTGTCTCGATAGTCAAATC+CGG + chr2.2:1977018-1977037 None:intergenic 40.0%
TTATAAGCTCCTCCATTGCT+TGG + chr2.2:1976414-1976433 None:intergenic 40.0%
TTCTGAACAGATCAGAGTCA+TGG - chr2.2:1974185-1974204 MS.gene36323:CDS 40.0%
TTTCTTTGCTCTAATCAGGC+GGG - chr2.2:1973892-1973911 MS.gene36323:CDS 40.0%
! AAGCTTCCATACATGGACTA+AGG - chr2.2:1979053-1979072 MS.gene36323:intron 40.0%
! AATGTTAGGTGTTGCCACAT+TGG - chr2.2:1978960-1978979 MS.gene36323:intron 40.0%
! AGCTTGAAGCACTAATTGCT+TGG + chr2.2:1979038-1979057 None:intergenic 40.0%
! CATCTTCAAGTGTTGTCCAT+GGG + chr2.2:1978148-1978167 None:intergenic 40.0%
! CTCCTAGGCAAGTCAAATTT+TGG - chr2.2:1975362-1975381 MS.gene36323:intron 40.0%
! GAGGAAAAAAGAGAGCATAG+AGG + chr2.2:1974231-1974250 None:intergenic 40.0%
! GCGTTTTCTGCATTTCACTA+GGG + chr2.2:1978463-1978482 None:intergenic 40.0%
! TGGATATCTTTGGTCTTCCA+TGG + chr2.2:1976543-1976562 None:intergenic 40.0%
! TTGTTGTTCTTCAGTTGCCA+TGG + chr2.2:1975657-1975676 None:intergenic 40.0%
! TTTCAAGTAGATAGCTCGGT+TGG + chr2.2:1973663-1973682 None:intergenic 40.0%
! TTTCTGATGGCTTGGAATCA+AGG - chr2.2:1979706-1979725 MS.gene36323:intron 40.0%
!! CATAACCTCAGCTTTGAGTT+TGG + chr2.2:1975696-1975715 None:intergenic 40.0%
!! CTGTAGGAGAAGCATTTGTA+AGG + chr2.2:1979806-1979825 None:intergenic 40.0%
!! GCTTTAGGGAAATATGCATC+AGG - chr2.2:1976274-1976293 MS.gene36323:intron 40.0%
!! GTAATCATAGAGTACTGTGC+AGG + chr2.2:1974559-1974578 None:intergenic 40.0%
!! TGATTTGGGTACGACGATTT+TGG + chr2.2:1975390-1975409 None:intergenic 40.0%
!! TTAACAGTGGCCTAGCTTTT+GGG - chr2.2:1978770-1978789 MS.gene36323:intron 40.0%
!! TTGGCTTTAGAAGTAGAAGG+AGG + chr2.2:1973444-1973463 None:intergenic 40.0%
!!! CGAACGTCTAGTTTTCTTCA+TGG - chr2.2:1978828-1978847 MS.gene36323:intron 40.0%
!!! CTTTTGGTCTTGATGAGTCT+AGG - chr2.2:1976371-1976390 MS.gene36323:intron 40.0%
AAATGCAGAAAACGCCCATC+TGG - chr2.2:1978468-1978487 MS.gene36323:intron 45.0%
AAGTAGAGTGGTCCAACCAA+TGG + chr2.2:1975178-1975197 None:intergenic 45.0%
AGCTAGGCCACTGTTAACAA+TGG + chr2.2:1978767-1978786 None:intergenic 45.0%
AGGGCAAATGGTTACCATTG+TGG - chr2.2:1976886-1976905 MS.gene36323:CDS 45.0%
ATTGCCTCTGTCTTGTCCTT+TGG + chr2.2:1979391-1979410 None:intergenic 45.0%
CAAAAATGGTGCAGTGCAAC+TGG - chr2.2:1976861-1976880 MS.gene36323:CDS 45.0%
CACATCCTGATGAAAAGCAG+AGG - chr2.2:1975311-1975330 MS.gene36323:intron 45.0%
CATTGTGGTAGCTACTAGCT+AGG - chr2.2:1976901-1976920 MS.gene36323:CDS 45.0%
CCATGGACAACACTTGAAGA+TGG - chr2.2:1978146-1978165 MS.gene36323:intron 45.0%
CCCATCTGGTTGCATTATTG+AGG - chr2.2:1978482-1978501 MS.gene36323:intron 45.0%
CTACAATGGGTGAACCAATG+TGG - chr2.2:1976440-1976459 MS.gene36323:CDS 45.0%
CTAGCTAGTAGCTACCACAA+TGG + chr2.2:1976903-1976922 None:intergenic 45.0%
GACGTTCGCATTGAAGTTGA+AGG + chr2.2:1978816-1978835 None:intergenic 45.0%
GCCTCCACAGTATTTATCGT+TGG + chr2.2:1978226-1978245 None:intergenic 45.0%
GGTATTCAATCCGTGATGAC+CGG - chr2.2:1979636-1979655 MS.gene36323:intron 45.0%
GGTGAAGATGATGAAGGTGA+TGG - chr2.2:1974108-1974127 MS.gene36323:CDS 45.0%
GTGCTTCAAGCTTCCATACA+TGG - chr2.2:1979046-1979065 MS.gene36323:intron 45.0%
GTTCCCATGAAGGATTCAAC+CGG - chr2.2:1978859-1978878 MS.gene36323:intron 45.0%
TACGCACCTGTGGATATTAC+CGG - chr2.2:1979615-1979634 MS.gene36323:intron 45.0%
TCACACTGTCAGGACTTTAG+CGG - chr2.2:1977810-1977829 MS.gene36323:intron 45.0%
TCTGCACACATTGACAACGT+TGG + chr2.2:1973405-1973424 None:intergenic 45.0%
TGAAAATCCTGAGGGCAGTA+TGG + chr2.2:1979682-1979701 None:intergenic 45.0%
TGGTTACGTAGCTTAGAGAC+CGG - chr2.2:1976460-1976479 MS.gene36323:CDS 45.0%
TTAGCCAAAGGACAAGACAG+AGG - chr2.2:1979384-1979403 MS.gene36323:intron 45.0%
TTCTTTGCTCTAATCAGGCG+GGG - chr2.2:1973893-1973912 MS.gene36323:CDS 45.0%
! CCATCTTCAAGTGTTGTCCA+TGG + chr2.2:1978149-1978168 None:intergenic 45.0%
! CTAATCAGGCGGGGATTTTT+CGG - chr2.2:1973902-1973921 MS.gene36323:CDS 45.0%
! GATGATGAAGGTGATGGTGA+TGG - chr2.2:1974114-1974133 MS.gene36323:CDS 45.0%
! GCTAGCTAGTATAGCGGTTT+TGG - chr2.2:1976025-1976044 MS.gene36323:intron 45.0%
! GGCGTTTTCTGCATTTCACT+AGG + chr2.2:1978464-1978483 None:intergenic 45.0%
! GGTCATCACGGATTGAATAC+CGG + chr2.2:1979637-1979656 None:intergenic 45.0%
! TCACCGGTTGAATCCTTCAT+GGG + chr2.2:1978865-1978884 None:intergenic 45.0%
! TGGCTTGGAATCAAGGCAAA+TGG - chr2.2:1979713-1979732 MS.gene36323:intron 45.0%
!! ATTTGACTTGCCTAGGAGCA+AGG + chr2.2:1975360-1975379 None:intergenic 45.0%
!! CTCTGCTTTTCATCAGGATG+TGG + chr2.2:1975313-1975332 None:intergenic 45.0%
!! GCTTTTTCTTCCAGCCAATG+TGG + chr2.2:1978977-1978996 None:intergenic 45.0%
!! GGGGCAACAAGCCTTATTTA+TGG + chr2.2:1975600-1975619 None:intergenic 45.0%
!! GTTAACAGTGGCCTAGCTTT+TGG - chr2.2:1978769-1978788 MS.gene36323:intron 45.0%
!! TAACAGTGGCCTAGCTTTTG+GGG - chr2.2:1978771-1978790 MS.gene36323:intron 45.0%
!! TGTTGCCTCTGCTTTTCATC+AGG + chr2.2:1975319-1975338 None:intergenic 45.0%
!!! AGGCTGTTTTTTCTCGTGTC+TGG + chr2.2:1977072-1977091 None:intergenic 45.0%
!!! ATATTTTATTTTATTATAAG+TGG - chr2.2:1977378-1977397 MS.gene36323:intron 5.0%
AATCTAGCCATACTGCCCTC+AGG - chr2.2:1979672-1979691 MS.gene36323:intron 50.0%
AATGCCTTGCCCCAAAAGCT+AGG + chr2.2:1978783-1978802 None:intergenic 50.0%
AATGGTGGTATACGCACCTG+TGG - chr2.2:1979605-1979624 MS.gene36323:intron 50.0%
ACAAGGCTAAGAGAGAGAGC+TGG + chr2.2:1973483-1973502 None:intergenic 50.0%
AGAGGCTCAGAGCAGCTTTA+GGG - chr2.2:1976260-1976279 MS.gene36323:intron 50.0%
AGCAATTAGGCCTTGCTCCT+AGG - chr2.2:1975347-1975366 MS.gene36323:intron 50.0%
AGCGGTCGTCCAATCTTGAT+TGG - chr2.2:1977828-1977847 MS.gene36323:intron 50.0%
ATGGTGCAGTGCAACTGGTA+AGG - chr2.2:1976866-1976885 MS.gene36323:CDS 50.0%
CACCATCTCTGTTTGTGGTG+GGG + chr2.2:1975634-1975653 None:intergenic 50.0%
CATGGCACCATCTCTGTTTG+TGG + chr2.2:1975639-1975658 None:intergenic 50.0%
CGAATCACATCCGGTCATCA+CGG + chr2.2:1979649-1979668 None:intergenic 50.0%
CTAAGAGAGAGAGCTGGAGA+GGG + chr2.2:1973477-1973496 None:intergenic 50.0%
GCACCATCTCTGTTTGTGGT+GGG + chr2.2:1975635-1975654 None:intergenic 50.0%
GGATGAAACTCGTCGAACTG+AGG - chr2.2:1979218-1979237 MS.gene36323:CDS 50.0%
GGCAACAAACGTTCCCATGA+AGG - chr2.2:1978849-1978868 MS.gene36323:intron 50.0%
GTGCAACTGGTAAGGGCAAA+TGG - chr2.2:1976874-1976893 MS.gene36323:CDS 50.0%
TACAATAGGAGGTGAGCGTG+TGG - chr2.2:1974002-1974021 MS.gene36323:intron 50.0%
TGGTGCAGTGCAACTGGTAA+GGG - chr2.2:1976867-1976886 MS.gene36323:CDS 50.0%
TTCCACGCATTCACACTGTC+AGG - chr2.2:1977800-1977819 MS.gene36323:intron 50.0%
! CACAAACAGAGATGGTGCCA+TGG - chr2.2:1975637-1975656 MS.gene36323:intron 50.0%
! CTCACCGGTTGAATCCTTCA+TGG + chr2.2:1978866-1978885 None:intergenic 50.0%
! GAGGAAGGGAGTACAATAGG+AGG - chr2.2:1973991-1974010 MS.gene36323:intron 50.0%
! GGTAGTATGGGTGGAGCATT+TGG - chr2.2:1978705-1978724 MS.gene36323:intron 50.0%
! TTAGGTGTTGCCACATTGGC+TGG - chr2.2:1978964-1978983 MS.gene36323:intron 50.0%
!! GATTTTTCGGCATGGCAGTG+CGG - chr2.2:1973915-1973934 MS.gene36323:intron 50.0%
!!! TAGCTTTTGGGGCAAGGCAT+TGG - chr2.2:1978782-1978801 MS.gene36323:intron 50.0%
AATAGGAGGTGAGCGTGTGG+AGG - chr2.2:1974005-1974024 MS.gene36323:intron 55.0%
AGGTGGAAGAAGGGGAGGAA+GGG - chr2.2:1973977-1973996 MS.gene36323:intron 55.0%
GAGAGGCTCAGAGCAGCTTT+AGG - chr2.2:1976259-1976278 MS.gene36323:intron 55.0%
GCGTGGAAAAAGTGACCGCA+TGG + chr2.2:1977788-1977807 None:intergenic 55.0%
GCTAAGAGAGAGAGCTGGAG+AGG + chr2.2:1973478-1973497 None:intergenic 55.0%
GGCACCATCTCTGTTTGTGG+TGG + chr2.2:1975636-1975655 None:intergenic 55.0%
GTCCCCACCACAAACAGAGA+TGG - chr2.2:1975629-1975648 MS.gene36323:intron 55.0%
GTCCTGACAGTGTGAATGCG+TGG + chr2.2:1977805-1977824 None:intergenic 55.0%
TATGGAGGTGGAAGAAGGGG+AGG - chr2.2:1973972-1973991 MS.gene36323:intron 55.0%
! GGGGAGGAAGGGAGTACAAT+AGG - chr2.2:1973988-1974007 MS.gene36323:intron 55.0%
!! AAGGCTTGTTGCCCCAACTG+TGG - chr2.2:1975605-1975624 MS.gene36323:intron 55.0%
!! AGGCTTGTTGCCCCAACTGT+GGG - chr2.2:1975606-1975625 MS.gene36323:intron 55.0%
GAGGTGGAAGAAGGGGAGGA+AGG - chr2.2:1973976-1973995 MS.gene36323:intron 60.0%
! TTTTCGGCATGGCAGTGCGG+CGG - chr2.2:1973918-1973937 MS.gene36323:intron 60.0%
!! CAGGCGGGGATTTTTCGGCA+TGG - chr2.2:1973907-1973926 MS.gene36323:CDS 60.0%
!! GGCTTGTTGCCCCAACTGTG+GGG - chr2.2:1975607-1975626 MS.gene36323:intron 60.0%
!!! GTGGCCTAGCTTTTGGGGCA+AGG - chr2.2:1978776-1978795 MS.gene36323:intron 60.0%
TGGTGGGGACCCCACAGTTG+GGG + chr2.2:1975619-1975638 None:intergenic 65.0%
! GTGGTGGGGACCCCACAGTT+GGG + chr2.2:1975620-1975639 None:intergenic 65.0%
! TGTGGTGGGGACCCCACAGT+TGG + chr2.2:1975621-1975640 None:intergenic 65.0%
CGGCGGGGGAGGGTGAAGGA+GGG - chr2.2:1973938-1973957 MS.gene36323:intron 75.0%
TCGGCATGGCAGTGCGGCGG+CGG - chr2.2:1973921-1973940 MS.gene36323:intron 75.0%
! CGGCATGGCAGTGCGGCGGC+GGG - chr2.2:1973922-1973941 MS.gene36323:intron 80.0%
! GCATGGCAGTGCGGCGGCGG+GGG - chr2.2:1973924-1973943 MS.gene36323:intron 80.0%
! GCGGCGGGGGAGGGTGAAGG+AGG - chr2.2:1973937-1973956 MS.gene36323:intron 80.0%
! GGCATGGCAGTGCGGCGGCG+GGG - chr2.2:1973923-1973942 MS.gene36323:intron 80.0%
! GCGGCGGCGGGGGAGGGTGA+AGG - chr2.2:1973934-1973953 MS.gene36323:intron 85.0%
! GGCAGTGCGGCGGCGGGGGA+GGG - chr2.2:1973928-1973947 MS.gene36323:intron 85.0%
! TGGCAGTGCGGCGGCGGGGG+AGG - chr2.2:1973927-1973946 MS.gene36323:intron 85.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 1973348 1979920 1973348 ID=MS.gene36323
chr2.2 mRNA 1973348 1979920 1973348 ID=MS.gene36323.t1;Parent=MS.gene36323
chr2.2 exon 1979768 1979920 1979768 ID=MS.gene36323.t1.exon1;Parent=MS.gene36323.t1
chr2.2 CDS 1979768 1979920 1979768 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1979057 1979358 1979057 ID=MS.gene36323.t1.exon2;Parent=MS.gene36323.t1
chr2.2 CDS 1979057 1979358 1979057 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1977857 1977974 1977857 ID=MS.gene36323.t1.exon3;Parent=MS.gene36323.t1
chr2.2 CDS 1977857 1977974 1977857 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1977559 1977753 1977559 ID=MS.gene36323.t1.exon4;Parent=MS.gene36323.t1
chr2.2 CDS 1977559 1977753 1977559 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1976635 1977012 1976635 ID=MS.gene36323.t1.exon5;Parent=MS.gene36323.t1
chr2.2 CDS 1976635 1977012 1976635 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1976386 1976487 1976386 ID=MS.gene36323.t1.exon6;Parent=MS.gene36323.t1
chr2.2 CDS 1976386 1976487 1976386 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1974741 1974950 1974741 ID=MS.gene36323.t1.exon7;Parent=MS.gene36323.t1
chr2.2 CDS 1974741 1974950 1974741 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1974388 1974562 1974388 ID=MS.gene36323.t1.exon8;Parent=MS.gene36323.t1
chr2.2 CDS 1974388 1974562 1974388 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1974029 1974300 1974029 ID=MS.gene36323.t1.exon9;Parent=MS.gene36323.t1
chr2.2 CDS 1974029 1974300 1974029 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1973843 1973929 1973843 ID=MS.gene36323.t1.exon10;Parent=MS.gene36323.t1
chr2.2 CDS 1973843 1973929 1973843 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
chr2.2 exon 1973348 1973728 1973348 ID=MS.gene36323.t1.exon11;Parent=MS.gene36323.t1
chr2.2 CDS 1973348 1973728 1973348 ID=cds.MS.gene36323.t1;Parent=MS.gene36323.t1
Gene Sequence

>MS.gene36323

ATGACACAACCATTGCTTTTGCTCCTTAAAAAACACAACACACTTCTTTCTTCACCAACGTTGTCAATGTGTGCAGACATGTCTAATAATAATCCTCCTTCTACTTCTAAAGCCAAAGATTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGTAAGTCCTAACTATAACTAACTCTCTTCTTTATTTCTTCTTCACATTTCTTCAATATTTTCTTATTTAAACGTTAATAAGTTTGTAGTTACATTAGTTTTTATGATTAAATTTTGAACCTCTAGTCAAATTTTTGTTTTTCCCGTTGTTTTTAACTCACCAACCGAGCTATCTACTTGAAACATTTCTTCCTCGTTTTATGTTTCATTTGCTTTATATGTTTCTTCTGTTAGAGTCTCACATCGGATAGATAAAATTATTTCAAGTGACACATATGTCATTAGGGTTATTAATAATAATTTTTTTTCTTATGAGTTTTCTTTTAAAAATTTTGAGACTTTCCATCTAATGAACTAATTTTTAAGTTGGACTTTAAGTTCTAACATATTTTTTTCTTTGCTCTAATCAGGCGGGGATTTTTCGGCATGGCAGTGCGGCGGCGGGGGAGGGTGAAGGAGGGAGTTTTAGTAATATGGAGGTGGAAGAAGGGGAGGAAGGGAGTACAATAGGAGGTGAGCGTGTGGAGGAAATTAGCAGCGAGTATTCAGGTCCAACTAAATCCAAATCAATGGATGAATTTGAAGGAGATGAACTTGAAGATGATGAAGGTGAAGATGATGAAGGTGATGGTGATGGTGATAATACGAACAAGAAGAAGAAAAGGAAGAAATATCACAGGCACACTTCTGAACAGATCAGAGTCATGGAAGCGTGCGTATAGTATAATCCTCTATGCTCTCTTTTTTCCTCTATTCGTGTGCCTATTTTGTTTGGATGACAATTAATACTCCTTCATAATAGTACCACATATCACTTTAAAGAACTTTAATTTGTCTCATTCTATTTATCAATTTAAATAACAAATAAATACTATTAATTATTTTTTATAGTTTATCAAAAAAAGTATACTAATAATTTTTTTTAACAAGTGTGTATCATGTTACTAATTTAAAAGGAAAATATCATTGACATTGAATCACCCGTGAGTGTGCTATTGAGAATTCAGTGTTATGAGTTTCTTATATTTTTTCTATTTTTAGTTCCTACTATCTTAACCTGCACAGTACTCTATGATTACCATATTGTCTGTCTTGGTTTCTTAAGAGATACCTTTGATTAATATAGTTATACTGTATTTGTTTGAATAAAAGAATGACTAGTGTGATGATTATCTGTTCTTATTTATGTAAGTTTTTTAAGTGCATAGGTCACTAATTTGAGGTTACCAATTAAATTTCTTTTTCTTCAAAGTTAGTATATATAGGCCATGTGATTTGCGTAGTTTATAATATATTGAACAGCTTTTTCGTTATTTGTTTATTTGATATCTTATAGTGTTACAAAAATGTTTTACACTTATTTTTTTAGTTAATCATATGCAAAAATATATAGTTAATTCAGTTGAATAGAAGTTAACTTAATTTATGATAAAAATTTGGTAAACTCATATATTGAATTAACCACAGTTTTGATCGTAAATTAAATTAACAATTTAATCAACTAGGGTTTAGAAAAGTCAGTGAGCATGTACTATTATTATTGGTAAGGTTATGTCTTTGTAAAACATTTTTCCCCACTTACCACTTGATTAGTTTTTTGTTTTTTACAATGCCTACTGATAAGATTGTGGTATATTTATTGAAGAGGTGTACTTGGCGTTTGCATTATTAAACACCATTGGTTGGACCACTCTACTTATAAGAATTGAAGCATGTTGTGAAAAATAAATTAAATTGAATAACAAAAAAAAAAAAAAAAAAAAACTTACATGAATGGTGAATGTAATATTGTAGGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGTATTATTTGGATCAACTCAATAAAATTGTGCTATTTTTTGCTTTTTAATTATTAAGTGAATTTAAAAATAATATTAAGCAGTACTTATGTTGCATTTTTCAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAAGGAGAAAAATAAGACCCTAAGAGAGACCATAAATAAGGCTTGTTGCCCCAACTGTGGGGTCCCCACCACAAACAGAGATGGTGCCATGGCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTTATGATTAGAATTAACTCAAACTAAACAACATCACTTTTTAATTACACCATTGGAAAAAAAAATTATACTAGTTGTAGAGAGAACAATATATGTATTGTCGGTGTAAAACAATTTTACAATCACATTCAATGAGAGACCACAATTTCTGCATGTCGTAATATCAATTTCAAAATATCTTTAAAAAATGAGGTAATATGGGAAAATAATAGATTTTTATTGGATGTCGTAAAACTATTCTACACCGACAATGCACATATCCTTTAAAACTATTCAATGTTTTACTATGTTTCATAGCTAATTCTTTTGTATTAAGCTAGCTAGTATAGCGGTTTTGGTCCCTTGTTGTTGATTAATATATTCCATTTTTCTTAACTAGTAGTTTATCATGTCTATTAATTTTGTATCAATGCATGTCAACTAAATCATTTTGATCATCTGTAATTAGCTAGTAGTTTATCATGTCTATTACAGTTTTTATATTTTTTTACAATAAAAATTAAATTATAGATTGTAAAACTACACTTTTGATTGATACATGTGTAGGTAGAGAGGCTCAGAGCAGCTTTAGGGAAATATGCATCAGGGACAATGTCACCTTCATGTTCTACTAGCCATGACCAAGAGAACATTAAAAGCTCTTTGGATTTTTATACTGGAACTTTTGGTCTTGATGAGTCTAGGATAATGGATGTAGTAAACCAAGCAATGGAGGAGCTTATAAAGATGGCTACAATGGGTGAACCAATGTGGTTACGTAGCTTAGAGACCGGTCGCGAAATACTTAACTATGATGAATATATGAAGGAGTTTGCAGTTGAAAATTCAGACCATGGAAGACCAAAGATATCCATTGAAGCTTCAAGAGCTACAGGAGTTGTTTTTGCAGATCTTCCTCGGATTGTCCAATGTTTTCTTGATGCTGTAAGACACATATTAATGCTTATTATACATTGAATTATCATATCCTTGAACCATATGAGTAATATCATTGCACGCACATAAAAAAAATACTATATCCTTTTGTTTGTAGAAGTTTAACAATATTTACTCATTGAACTATTTTTGCAGAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACACTATATGCAAAGGAGAAGGTTCTAACAAAAATGGTGCAGTGCAACTGGTAAGGGCAAATGGTTACCATTGTGGTAGCTACTAGCTAGGTATCTTTGATATTGAATTAGATGGGCCTACTGAATTAATGAATTTCTTTTACGGGCTTCTTTTTCCCACGATTCTTAAAAATTACTCTAGACCGGATTTGACTATCGAGACACAAAAAAACACCGTTCTTCTCGGATTCACTCATCCAGACACGAGAAAAAACAGCCTGTCTGAATAGGTAAATCCGAGTGGGTGTAATTTTTAAAAGTAGCTCATTTTTTATGAGTACCTATCAAAAAAGACATTATGAAGTTTACAATATTCACACACCAACTATTGATTAGTTAATGAAAGATTTCATAAAACCTTATGCAGGAATGGTAAATTGACTAAAGAGTTTCTTATAACTTCAGTCGTTTTCATTCACTGATTTTAACTTCAAATGTCTGAAATAAAATTTATTTCTTGCTGTAAATCTGAAAGGAACAGTTCATACATGGATTTATTGATATGGATATTTTATTTTATTATAAGTGGTCCAAACATGACAAGCAAAAGAAAATGATGGTACATTGTAATTTTAAATGATATTTCCTATGTTTGAAAATTCTATTCTAATGTTGTAAATGTTTTAGTGGATAAAAAAAAAAATATTAAGTTGATTGTGGTAGAATTATATGCTTTTGATTATAGTATGGTTTCTTAACACATGCATTAATCTTTCTTTTTAGAAGTGAAGGTTCTTGTCAACTTTTCATCTCCTTTACTTATCTATTTCACAGAAATATAGATAAAGACACGTAAAATATAAAAAGTTCAATGTCATTTAAACTTTAGTAACACTTTGGAATTTTCCTCTCATCCATATCTTGTCTAATTCATCTCATTGGAATCTCTCGCCCTTCATGACAAATTATGATTCCATGCGGTCACTTTTTCCACGCATTCACACTGTCAGGACTTTAGCGGTCGTCCAATCTTGATTGGATCGTCTAGAAAAAGCAGATTTAATTTTTATTCTATAATTTTTAAAATACCGAACATAAATCCTAACCATTCGATCTTGATCAAACTTTCACTGGTGTCCGATTGCGTGATTTGTAAACTGCAGCAAATTGCGGTCCCTCCATTACTTATAAGTGGTGTGTATCTAACCGCCACTTTACAAGTCAGTTTTATAAAGTTGATTTAGGTCCAATCCAAAATCTAAAACCATCTACTTTGGATTAAATACATAATTTTTAAACAACTATACATATAGAATGAGGCAGTAACATTTATCCCATGGACAACACTTGAAGATGGAAATAGAAACAAAGGTAGAGGAAATTCTAAGATGTGGACATATTGCACAGTTTTCCAACGATAAATACTGTGGAGGCACAGAGCATATACTACATAACTTGGACATGAAATCATAAAACTAACCTTAACTTTGTATTTGGTACGTACAGATGTTTGCTGAGTTGCAAATGTTAACACCAATGGTTCCAACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAGTTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGATAAAGTAGAAGACAACATTGACAAGTCCCTAGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGACATTGCAAAGTATGTAATAGCAGCAATTCAAATTCTAATTTGTTTCCATTTTTGTTACATAATGTATGGAGCATAATTTGGACCTATATGTAAAATTCTTTTGATATTATTTTTATGAAGGTTTTGTTTATGTAGATGTTTATGCAAAATGATTTTGAATATTGATTTTTCTTTTGGCTTTAAATAGGTAGTATGGGTGGAGCATTTGGAGTGCCAAAAGAGCGTAGTTCATTCAATGTATCGCACCATTGTTAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACCGGTGAGTAAATTAAGAATTATCATAAGAAAAATGTTATTTTGTAAATATTGTACACTAAAATGCTTAGTGATGAAAACAAAATGTTAGGTGTTGCCACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTTTGCCAAGCAATTAGTGCTTCAAGCTTCCATACATGGACTAAGGTTACTAGTAAAACTGGAGAAGACATAAGGATTAGTTCTAGAAAGAACTTGAATGATCCTAGTGAACCTCTTGGATTGATAGTTTGTGCAGTTTCTTCTATATGGTTGCCTATATCTCCTAATGTTTTGTTTGATTTCTTGAGGGATGAAACTCGTCGAACTGAGGTACCGAGTTTAATATAGTGATTCAATCATATTTTACCTGAGATATTTTGTATATGAATTTAGAGGGGATATTTGTGTTGACAATAATCATTATGACAGTGGGATATAATGTCTAATGGTGGGACAGTGCAACCCATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACTATCCAAGTAAGTTACTCAATATTCAAAACTGAACATATTGTTGAACAAAATGCAAGTTACATTTAAAACATTTTCCAACTTCTAAGAAAAATAAGAGGTTTTTTTCTTCTCCCTTTGCAGACAATTAAATCAAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAATTCTTACGAATCAATGGTGGTATACGCACCTGTGGATATTACCGGTATTCAATCCGTGATGACCGGATGTGATTCGAGCAATCTAGCCATACTGCCCTCAGGATTTTCAATTGTTTCTGATGGCTTGGAATCAAGGCAAATGGTAATTACTTCGAGGCGGGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTTCAAATCCTTACAAATGCTTCTCCTACAGCCAAATTAACAATGGAGTCTGTGGACTCTGTCAACTCTCTTGTATCATGTACATTGAGACACATCAAAACAAGTCTAAATTGTGAAGATGGTTAG
Protein sequence

>MS.gene36323.t1

MTQPLLLLLKKHNTLLSSPTLSMCADMSNNNPPSTSKAKDFFPSPALSLSLAGIFRHGSAAAGEGEGGSFSNMEVEEGEEGSTIGGERVEEISSEYSGPTKSKSMDEFEGDELEDDEGEDDEGDGDGDNTNKKKKRKKYHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKTLRETINKACCPNCGVPTTNRDGAMATEEQQLRIENAKLKAEVERLRAALGKYASGTMSPSCSTSHDQENIKSSLDFYTGTFGLDESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFAVENSDHGRPKISIEASRATGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKRPSGCIIEDKSNGHCKVVWVEHLECQKSVVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSEPLGLIVCAVSSIWLPISPNVLFDFLRDETRRTEWDIMSNGGTVQPIANLAKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTMESVDSVNSLVSCTLRHIKTSLNCEDG