AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36387.t1 MTR_2g100490 93.734 399 18 1 1 399 1 392 0.0 722
MS.gene36387.t1 MTR_8g015450 50.870 460 112 21 1 388 1 418 1.11e-104 316
MS.gene36387.t1 MTR_3g101810 62.366 93 34 1 268 360 143 234 8.43e-35 130
MS.gene36387.t1 MTR_8g093500 63.043 92 33 1 269 360 87 177 5.78e-34 127
MS.gene36387.t1 MTR_5g017210 61.682 107 39 2 258 363 98 203 1.76e-28 112
MS.gene36387.t1 MTR_7g069590 52.941 68 32 0 303 370 32 99 7.70e-20 85.9
MS.gene36387.t1 MTR_1g018090 62.963 54 20 0 306 359 283 336 8.68e-17 81.6
MS.gene36387.t1 MTR_5g079500 58.929 56 23 0 304 359 225 280 3.87e-16 79.0
MS.gene36387.t1 MTR_1g106460 49.254 67 34 0 293 359 234 300 7.38e-16 78.6
MS.gene36387.t1 MTR_5g005110 55.357 56 25 0 304 359 231 286 2.04e-15 77.0
MS.gene36387.t1 MTR_1g106470 55.357 56 25 0 304 359 203 258 3.80e-15 75.9
MS.gene36387.t1 MTR_3g103030 50.794 63 31 0 297 359 229 291 9.38e-15 75.1
MS.gene36387.t1 MTR_2g067000 58.491 53 22 0 308 360 168 220 1.50e-13 71.2
MS.gene36387.t1 MTR_1g060700 59.259 54 22 0 307 360 357 410 1.65e-13 72.4
MS.gene36387.t1 MTR_4g131160 55.357 56 25 0 304 359 203 258 1.84e-13 71.6
MS.gene36387.t1 MTR_4g131160 55.357 56 25 0 304 359 206 261 1.93e-13 71.6
MS.gene36387.t1 MTR_1g080890 55.357 56 25 0 304 359 200 255 5.89e-13 70.1
MS.gene36387.t1 MTR_1g106480 52.941 51 24 0 309 359 81 131 9.74e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36387.t1 AT3G21330 54.639 291 118 8 105 391 86 366 3.24e-84 261
MS.gene36387.t1 AT4G00120 61.798 89 33 1 272 360 88 175 1.50e-29 114
MS.gene36387.t1 AT3G50330 52.941 136 60 4 227 360 49 182 4.31e-26 105
MS.gene36387.t1 AT5G67060 64.130 92 32 1 269 360 83 173 7.88e-26 104
MS.gene36387.t1 AT5G67060 64.130 92 32 1 269 360 95 185 9.33e-26 104
MS.gene36387.t1 AT5G09750 62.366 93 34 1 269 361 92 183 3.48e-24 100
MS.gene36387.t1 AT5G01305 57.353 68 29 0 295 362 35 102 1.44e-20 88.6
MS.gene36387.t1 AT1G66470 39.450 109 64 1 251 359 151 257 6.39e-17 81.3
MS.gene36387.t1 AT5G37800 46.067 89 40 1 279 359 175 263 8.61e-17 80.9
MS.gene36387.t1 AT5G43175 46.269 67 36 0 293 359 128 194 2.74e-16 77.8
MS.gene36387.t1 AT4G33880 53.226 62 29 0 298 359 267 328 4.48e-16 79.3
MS.gene36387.t1 AT2G14760 53.226 62 29 0 298 359 238 299 7.44e-16 78.6
MS.gene36387.t1 AT1G27740 50.000 62 31 0 298 359 168 229 6.29e-15 74.7
MS.gene36387.t1 AT4G30980 54.545 66 29 1 295 359 127 192 1.05e-14 74.7
MS.gene36387.t1 AT2G24260 57.143 56 24 0 304 359 42 97 1.43e-14 73.6
MS.gene36387.t1 AT4G30980 54.545 66 29 1 295 359 175 240 1.43e-14 75.1
MS.gene36387.t1 AT2G24260 57.143 56 24 0 304 359 145 200 2.71e-14 73.9
MS.gene36387.t1 AT5G58010 49.275 69 34 1 292 359 93 161 6.18e-13 69.3
MS.gene36387.t1 AT2G14760 44.000 75 29 1 298 359 238 312 9.61e-13 69.3

Find 81 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTCTTCTACTGAATT+TGG 0.150846 2.2:+2687568 MS.gene36387:CDS
CATCTTGGTTTCTTTGACTT+TGG 0.197671 2.2:-2687616 None:intergenic
ATTTAGGCCGGTGACGAATT+TGG 0.200299 2.2:+2687777 MS.gene36387:CDS
GACAACGAAACTGATGAATT+TGG 0.263742 2.2:-2687682 None:intergenic
GATTTCAATCATGAGAATAT+TGG 0.268623 2.2:-2688116 None:intergenic
AATATTGGATGTTGACATTA+GGG 0.299941 2.2:-2688101 None:intergenic
TACATATGGATTGTATTAGT+TGG 0.305230 2.2:+2686930 None:intergenic
TTCATTTGTGCTATTGCCTC+TGG 0.321358 2.2:-2687730 None:intergenic
TTTAGGCCGGTGACGAATTT+GGG 0.332170 2.2:+2687778 MS.gene36387:CDS
AAGTGATGGAAAAGCCTAAA+AGG 0.336703 2.2:+2687806 MS.gene36387:CDS
AAGGAGAAGGCTATGTTTGC+AGG 0.348753 2.2:-2688054 None:intergenic
GAATATTGGATGTTGACATT+AGG 0.348934 2.2:-2688102 None:intergenic
TGCCTAGCCGCCACAGTTTG+TGG 0.350175 2.2:-2687853 None:intergenic
CTTGGTTTCTTTGACTTTGG+TGG 0.356806 2.2:-2687613 None:intergenic
ACATATGGATTGTATTAGTT+GGG 0.366245 2.2:+2686931 None:intergenic
TGTGCTATTGCCTCTGGATC+AGG 0.366599 2.2:-2687724 None:intergenic
CGAAGGTTCATACCACAAAA+AGG 0.367887 2.2:+2687497 MS.gene36387:CDS
AGAAACAAAGACATGCAATA+TGG 0.369927 2.2:+2687406 MS.gene36387:CDS
TATATAGAGCTGCAGCATTT+AGG 0.373879 2.2:+2687761 MS.gene36387:CDS
TGGTGGGCCATGTTGAATTC+AGG 0.375004 2.2:-2687187 None:intergenic
AACTTTAGTGCAGTTTCCTC+TGG 0.411517 2.2:+2687361 MS.gene36387:CDS
GCCGGTGACGAATTTGGGTT+TGG 0.412280 2.2:+2687783 MS.gene36387:CDS
GTCTTGCAGAAGATTGTTCC+TGG 0.420469 2.2:+2687907 MS.gene36387:CDS
AAACTGATGAATTTGGTTGC+TGG 0.427124 2.2:-2687675 None:intergenic
GGCAGTGACACATAATTGTT+AGG 0.431844 2.2:-2687166 None:intergenic
ACTAATTCTGTTCAAGATGA+TGG 0.443976 2.2:+2687295 MS.gene36387:CDS
CATTGATGCAGTGTCCATCT+TGG 0.445318 2.2:-2687935 None:intergenic
TACTCTTGCTGATTGGTTGG+TGG 0.446984 2.2:-2687204 None:intergenic
GAGATGCAGAAGGTTGAATC+AGG 0.449952 2.2:+2687073 MS.gene36387:CDS
GGTTGAGTGTTCCTCAAGAT+TGG 0.453307 2.2:-2686983 None:intergenic
CTGTGGCGGCTAGGCAAAGA+AGG 0.454660 2.2:+2687860 MS.gene36387:CDS
CTGAAAGTGAAGGGTATGAT+TGG 0.457359 2.2:-2687129 None:intergenic
GGACACTTATTATCCCATCT+TGG 0.463511 2.2:-2687631 None:intergenic
TAGAGCACAAGTCAAAGAAC+TGG 0.468462 2.2:+2687990 MS.gene36387:CDS
TGGATTCAACGAACTAGATC+AGG 0.470318 2.2:+2687426 MS.gene36387:CDS
GTAGTAGTACTCTTGCTGAT+TGG 0.471486 2.2:-2687211 None:intergenic
GTCAAAGAACTGGAGAATCT+AGG 0.474273 2.2:+2688000 MS.gene36387:CDS
AACGGTATCTCCGGCATCCT+CGG 0.479015 2.2:+2687450 MS.gene36387:CDS
CATGGGAATTGACTGGTTGA+AGG 0.490980 2.2:-2688073 None:intergenic
ACTCTTGCTGATTGGTTGGT+GGG 0.498014 2.2:-2687203 None:intergenic
GTTCCTCAAGATTGGTATGT+TGG 0.512590 2.2:-2686975 None:intergenic
TAGTACTCTTGCTGATTGGT+TGG 0.516116 2.2:-2687207 None:intergenic
ATCAGGAGCTGGAAACAGTT+GGG 0.523120 2.2:+2687090 MS.gene36387:CDS
TTACCTTGATCCGAGGATGC+CGG 0.523181 2.2:-2687460 None:intergenic
GAATTTGGGTTTGGAAGTGA+TGG 0.527963 2.2:+2687792 MS.gene36387:CDS
AATCAGGAGCTGGAAACAGT+TGG 0.528348 2.2:+2687089 MS.gene36387:CDS
AGATCAGGAAACGGTATCTC+CGG 0.528893 2.2:+2687441 MS.gene36387:CDS
TCTCCGGCATCCTCGGATCA+AGG 0.535763 2.2:+2687457 MS.gene36387:CDS
AGAGGCAATAGCACAAATGA+AGG 0.541238 2.2:+2687732 MS.gene36387:CDS
CTCTGGATCAGGCTCTTCAA+AGG 0.548876 2.2:-2687713 None:intergenic
CAGAAGGTTGAATCAGGAGC+TGG 0.555841 2.2:+2687079 MS.gene36387:CDS
AGATGGGATAATAAGTGTCC+TGG 0.557228 2.2:+2687634 MS.gene36387:CDS
TTGCCAACATACCAATCTTG+AGG 0.563140 2.2:+2686972 MS.gene36387:CDS
GTGTCCATCTTGGTTCCACC+AGG 0.564056 2.2:-2687925 None:intergenic
TAGTCTCTTGCAAAGTCTTG+TGG 0.568681 2.2:-2687004 None:intergenic
TGTTCCTGGTGGAACCAAGA+TGG 0.571863 2.2:+2687921 MS.gene36387:CDS
TAAAATCATTGATAATTCGA+AGG 0.575851 2.2:+2687480 MS.gene36387:CDS
GAAGGGAAAGAATAAGTGAG+AGG 0.579170 2.2:+2687878 MS.gene36387:CDS
TCCAAACCCAAATTCGTCAC+CGG 0.582453 2.2:-2687784 None:intergenic
ATCCACAAACTGTGGCGGCT+AGG 0.587768 2.2:+2687851 MS.gene36387:CDS
CAACGAACTAGATCAGGAAA+CGG 0.587929 2.2:+2687432 MS.gene36387:CDS
AATTGACTGGTTGAAGGAGA+AGG 0.590555 2.2:-2688067 None:intergenic
CAAAGTCAAAGAAACCAAGA+TGG 0.591227 2.2:+2687617 MS.gene36387:CDS
GTCAGTGTTACTGTTAGTAG+TGG 0.594081 2.2:-2687272 None:intergenic
TCTATATTGACTGAAAGTGA+AGG 0.595172 2.2:-2687139 None:intergenic
TAGAGCTGCAGCATTTAGGC+CGG 0.600006 2.2:+2687765 MS.gene36387:CDS
AAAGTCAAAGAAACCAAGAT+GGG 0.607623 2.2:+2687618 MS.gene36387:CDS
CTTTGAAGAGCCTGATCCAG+AGG 0.622335 2.2:+2687714 MS.gene36387:CDS
CTATATTGACTGAAAGTGAA+GGG 0.624533 2.2:-2687138 None:intergenic
TGAGTAGTAATGCTGAAGCA+AGG 0.639766 2.2:-2687541 None:intergenic
AAATTGATATTTGATGAACC+AGG 0.643576 2.2:-2687652 None:intergenic
TTGCAGAAGATTGTTCCTGG+TGG 0.647074 2.2:+2687910 MS.gene36387:CDS
ATCAAATGATCCACAAACTG+TGG 0.655439 2.2:+2687843 MS.gene36387:CDS
TCAAATGCAAGAGATGCAGA+AGG 0.662578 2.2:+2687063 MS.gene36387:CDS
AAATGATCCACAAACTGTGG+CGG 0.666151 2.2:+2687846 MS.gene36387:CDS
TGTGGCGGCTAGGCAAAGAA+GGG 0.669512 2.2:+2687861 MS.gene36387:CDS
GAGAAGGCTATGTTTGCAGG+AGG 0.669932 2.2:-2688051 None:intergenic
CTTGTGCTCTAAGAAACTTG+AGG 0.702293 2.2:-2687978 None:intergenic
AGTGACACATAATTGTTAGG+TGG 0.716025 2.2:-2687163 None:intergenic
GTCACTGCCTGAATTCAACA+TGG 0.722376 2.2:+2687180 MS.gene36387:CDS
AGTACTCTCAGATTCACCAG+AGG 0.741327 2.2:-2687377 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATCATTGATAATTCGA+AGG + chr2.2:2687480-2687499 MS.gene36387:CDS 20.0%
! AAATTGATATTTGATGAACC+AGG - chr2.2:2687655-2687674 None:intergenic 25.0%
! AATATTGGATGTTGACATTA+GGG - chr2.2:2688104-2688123 None:intergenic 25.0%
! AGTTAAAAACACTTGAACTT+GGG - chr2.2:2687042-2687061 None:intergenic 25.0%
! TAGTTAAAAACACTTGAACT+TGG - chr2.2:2687043-2687062 None:intergenic 25.0%
!! ATCAATATTAGTCCTTTTTG+TGG - chr2.2:2687512-2687531 None:intergenic 25.0%
!! ATCTTAACATTCTTCCTTTT+AGG - chr2.2:2687823-2687842 None:intergenic 25.0%
AAAGTCAAAGAAACCAAGAT+GGG + chr2.2:2687618-2687637 MS.gene36387:CDS 30.0%
ACTAATTCTGTTCAAGATGA+TGG + chr2.2:2687295-2687314 MS.gene36387:CDS 30.0%
ACTGCAAAAACAGAAACTTA+TGG + chr2.2:2687338-2687357 MS.gene36387:CDS 30.0%
AGAAACAAAGACATGCAATA+TGG + chr2.2:2687406-2687425 MS.gene36387:CDS 30.0%
GAATATTGGATGTTGACATT+AGG - chr2.2:2688105-2688124 None:intergenic 30.0%
TCTTCTTCTTCTACTGAATT+TGG + chr2.2:2687568-2687587 MS.gene36387:CDS 30.0%
TTTGCAGTCAGAAAAAATCA+TGG - chr2.2:2687326-2687345 None:intergenic 30.0%
! CTATATTGACTGAAAGTGAA+GGG - chr2.2:2687141-2687160 None:intergenic 30.0%
! TCTATATTGACTGAAAGTGA+AGG - chr2.2:2687142-2687161 None:intergenic 30.0%
AAAAACACTTGAACTTGGGT+TGG - chr2.2:2687038-2687057 None:intergenic 35.0%
AAACTGATGAATTTGGTTGC+TGG - chr2.2:2687678-2687697 None:intergenic 35.0%
AGTGACACATAATTGTTAGG+TGG - chr2.2:2687166-2687185 None:intergenic 35.0%
ATCAAATGATCCACAAACTG+TGG + chr2.2:2687843-2687862 MS.gene36387:CDS 35.0%
CAAAGTCAAAGAAACCAAGA+TGG + chr2.2:2687617-2687636 MS.gene36387:CDS 35.0%
GACAACGAAACTGATGAATT+TGG - chr2.2:2687685-2687704 None:intergenic 35.0%
TATATAGAGCTGCAGCATTT+AGG + chr2.2:2687761-2687780 MS.gene36387:CDS 35.0%
! AAGTGATGGAAAAGCCTAAA+AGG + chr2.2:2687806-2687825 MS.gene36387:CDS 35.0%
! AATGATTTTACCTTGATCCG+AGG - chr2.2:2687470-2687489 None:intergenic 35.0%
! CATCTTGGTTTCTTTGACTT+TGG - chr2.2:2687619-2687638 None:intergenic 35.0%
! TTGACATTAGGGTTTTGCAT+GGG - chr2.2:2688093-2688112 None:intergenic 35.0%
AAATGATCCACAAACTGTGG+CGG + chr2.2:2687846-2687865 MS.gene36387:CDS 40.0%
AACTTTAGTGCAGTTTCCTC+TGG + chr2.2:2687361-2687380 MS.gene36387:CDS 40.0%
AGAGGCAATAGCACAAATGA+AGG + chr2.2:2687732-2687751 MS.gene36387:CDS 40.0%
AGATGGGATAATAAGTGTCC+TGG + chr2.2:2687634-2687653 MS.gene36387:CDS 40.0%
CAACGAACTAGATCAGGAAA+CGG + chr2.2:2687432-2687451 MS.gene36387:CDS 40.0%
CGAAGGTTCATACCACAAAA+AGG + chr2.2:2687497-2687516 MS.gene36387:CDS 40.0%
GAAGGGAAAGAATAAGTGAG+AGG + chr2.2:2687878-2687897 MS.gene36387:CDS 40.0%
GGACACTTATTATCCCATCT+TGG - chr2.2:2687634-2687653 None:intergenic 40.0%
GGCAGTGACACATAATTGTT+AGG - chr2.2:2687169-2687188 None:intergenic 40.0%
GTAGTAGTACTCTTGCTGAT+TGG - chr2.2:2687214-2687233 None:intergenic 40.0%
GTCAAAGAACTGGAGAATCT+AGG + chr2.2:2688000-2688019 MS.gene36387:CDS 40.0%
GTTCCTCAAGATTGGTATGT+TGG - chr2.2:2686978-2686997 None:intergenic 40.0%
TAGAGCACAAGTCAAAGAAC+TGG + chr2.2:2687990-2688009 MS.gene36387:CDS 40.0%
TAGTCTCTTGCAAAGTCTTG+TGG - chr2.2:2687007-2687026 None:intergenic 40.0%
TCAAATGCAAGAGATGCAGA+AGG + chr2.2:2687063-2687082 MS.gene36387:CDS 40.0%
TGAGTAGTAATGCTGAAGCA+AGG - chr2.2:2687544-2687563 None:intergenic 40.0%
TGGATTCAACGAACTAGATC+AGG + chr2.2:2687426-2687445 MS.gene36387:CDS 40.0%
TTGCCAACATACCAATCTTG+AGG + chr2.2:2686972-2686991 MS.gene36387:CDS 40.0%
! AATTGACTGGTTGAAGGAGA+AGG - chr2.2:2688070-2688089 None:intergenic 40.0%
! CTGAAAGTGAAGGGTATGAT+TGG - chr2.2:2687132-2687151 None:intergenic 40.0%
! CTTGGTTTCTTTGACTTTGG+TGG - chr2.2:2687616-2687635 None:intergenic 40.0%
! GAATTTGGGTTTGGAAGTGA+TGG + chr2.2:2687792-2687811 MS.gene36387:CDS 40.0%
! GTCAGTGTTACTGTTAGTAG+TGG - chr2.2:2687275-2687294 None:intergenic 40.0%
! GTTGACATTAGGGTTTTGCA+TGG - chr2.2:2688094-2688113 None:intergenic 40.0%
! TAGTACTCTTGCTGATTGGT+TGG - chr2.2:2687210-2687229 None:intergenic 40.0%
! TTCATTTGTGCTATTGCCTC+TGG - chr2.2:2687733-2687752 None:intergenic 40.0%
!! CTTGTGCTCTAAGAAACTTG+AGG - chr2.2:2687981-2688000 None:intergenic 40.0%
AAGGAGAAGGCTATGTTTGC+AGG - chr2.2:2688057-2688076 None:intergenic 45.0%
AATCAGGAGCTGGAAACAGT+TGG + chr2.2:2687089-2687108 MS.gene36387:CDS 45.0%
AGATCAGGAAACGGTATCTC+CGG + chr2.2:2687441-2687460 MS.gene36387:CDS 45.0%
AGTACTCTCAGATTCACCAG+AGG - chr2.2:2687380-2687399 None:intergenic 45.0%
ATCAGGAGCTGGAAACAGTT+GGG + chr2.2:2687090-2687109 MS.gene36387:CDS 45.0%
ATTTAGGCCGGTGACGAATT+TGG + chr2.2:2687777-2687796 MS.gene36387:CDS 45.0%
CATTGATGCAGTGTCCATCT+TGG - chr2.2:2687938-2687957 None:intergenic 45.0%
GAGATGCAGAAGGTTGAATC+AGG + chr2.2:2687073-2687092 MS.gene36387:CDS 45.0%
GGTTGAGTGTTCCTCAAGAT+TGG - chr2.2:2686986-2687005 None:intergenic 45.0%
GTCACTGCCTGAATTCAACA+TGG + chr2.2:2687180-2687199 MS.gene36387:CDS 45.0%
GTCTTGCAGAAGATTGTTCC+TGG + chr2.2:2687907-2687926 MS.gene36387:CDS 45.0%
TCCAAACCCAAATTCGTCAC+CGG - chr2.2:2687787-2687806 None:intergenic 45.0%
TTGCAGAAGATTGTTCCTGG+TGG + chr2.2:2687910-2687929 MS.gene36387:CDS 45.0%
TTTAGGCCGGTGACGAATTT+GGG + chr2.2:2687778-2687797 MS.gene36387:CDS 45.0%
! ACTCTTGCTGATTGGTTGGT+GGG - chr2.2:2687206-2687225 None:intergenic 45.0%
! CATGGGAATTGACTGGTTGA+AGG - chr2.2:2688076-2688095 None:intergenic 45.0%
! GGTTTTGCATGGGAATTGAC+TGG - chr2.2:2688083-2688102 None:intergenic 45.0%
! TACTCTTGCTGATTGGTTGG+TGG - chr2.2:2687207-2687226 None:intergenic 45.0%
CAGAAGGTTGAATCAGGAGC+TGG + chr2.2:2687079-2687098 MS.gene36387:CDS 50.0%
CTCTGGATCAGGCTCTTCAA+AGG - chr2.2:2687716-2687735 None:intergenic 50.0%
GAGAAGGCTATGTTTGCAGG+AGG - chr2.2:2688054-2688073 None:intergenic 50.0%
TAGAGCTGCAGCATTTAGGC+CGG + chr2.2:2687765-2687784 MS.gene36387:CDS 50.0%
TGTTCCTGGTGGAACCAAGA+TGG + chr2.2:2687921-2687940 MS.gene36387:CDS 50.0%
TTACCTTGATCCGAGGATGC+CGG - chr2.2:2687463-2687482 None:intergenic 50.0%
! CTTTGAAGAGCCTGATCCAG+AGG + chr2.2:2687714-2687733 MS.gene36387:CDS 50.0%
! TGGTGGGCCATGTTGAATTC+AGG - chr2.2:2687190-2687209 None:intergenic 50.0%
! TGTGCTATTGCCTCTGGATC+AGG - chr2.2:2687727-2687746 None:intergenic 50.0%
AACGGTATCTCCGGCATCCT+CGG + chr2.2:2687450-2687469 MS.gene36387:CDS 55.0%
ATCCACAAACTGTGGCGGCT+AGG + chr2.2:2687851-2687870 MS.gene36387:CDS 55.0%
GTGTCCATCTTGGTTCCACC+AGG - chr2.2:2687928-2687947 None:intergenic 55.0%
TGTGGCGGCTAGGCAAAGAA+GGG + chr2.2:2687861-2687880 MS.gene36387:CDS 55.0%
! GCCGGTGACGAATTTGGGTT+TGG + chr2.2:2687783-2687802 MS.gene36387:CDS 55.0%
CTGTGGCGGCTAGGCAAAGA+AGG + chr2.2:2687860-2687879 MS.gene36387:CDS 60.0%
TCTCCGGCATCCTCGGATCA+AGG + chr2.2:2687457-2687476 MS.gene36387:CDS 60.0%
TGCCTAGCCGCCACAGTTTG+TGG - chr2.2:2687856-2687875 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2686935 2688134 2686935 ID=MS.gene36387
chr2.2 mRNA 2686935 2688134 2686935 ID=MS.gene36387.t1;Parent=MS.gene36387
chr2.2 exon 2686935 2688134 2686935 ID=MS.gene36387.t1.exon1;Parent=MS.gene36387.t1
chr2.2 CDS 2686935 2688134 2686935 ID=cds.MS.gene36387.t1;Parent=MS.gene36387.t1
Gene Sequence

>MS.gene36387

ATGGATTGTATTAGTTGGGATGATGACTCACAATTTGTTGCCAACATACCAATCTTGAGGAACACTCAACCACAAGACTTTGCAAGAGACTATTCAATGTCCAACCCAAGTTCAAGTGTTTTTAACTATCAAATGCAAGAGATGCAGAAGGTTGAATCAGGAGCTGGAAACAGTTGGGAAGAAACTTTAATATTCCAATCATACCCTTCACTTTCAGTCAATATAGATCCACCTAACAATTATGTGTCACTGCCTGAATTCAACATGGCCCACCAACCAATCAGCAAGAGTACTACTACATGCTCACTTGAATCATCACTTGATTGTTTGCTTTCAGCCACTACTAACAGTAACACTGACACTAATTCTGTTCAAGATGATGGAATTTCCATGATTTTTTCTGACTGCAAAAACAGAAACTTATGGAACTTTAGTGCAGTTTCCTCTGGTGAATCTGAGAGTACTTATGCTAGAAACAAAGACATGCAATATGGATTCAACGAACTAGATCAGGAAACGGTATCTCCGGCATCCTCGGATCAAGGTAAAATCATTGATAATTCGAAGGTTCATACCACAAAAAGGACTAATATTGATCAATATGATCCTTGCTTCAGCATTACTACTCAGAATTCTTCTTCTTCTACTGAATTTGGTTTCAAGCTTATCTCAGAGAAACCACCAAAGTCAAAGAAACCAAGATGGGATAATAAGTGTCCTGGTTCATCAAATATCAATTTCCAGCAACCAAATTCATCAGTTTCGTTGTCAAATTCATCCTTTGAAGAGCCTGATCCAGAGGCAATAGCACAAATGAAGGAAATGATATATAGAGCTGCAGCATTTAGGCCGGTGACGAATTTGGGTTTGGAAGTGATGGAAAAGCCTAAAAGGAAGAATGTTAAGATATCAAATGATCCACAAACTGTGGCGGCTAGGCAAAGAAGGGAAAGAATAAGTGAGAGGATTAGAGTCTTGCAGAAGATTGTTCCTGGTGGAACCAAGATGGACACTGCATCAATGCTTGATGAAGCTGCTAATTACCTCAAGTTTCTTAGAGCACAAGTCAAAGAACTGGAGAATCTAGGAAACAAGATTGATACAATGAATAATTGTCCTCCTGCAAACATAGCCTTCTCCTTCAACCAGTCAATTCCCATGCAAAACCCTAATGTCAACATCCAATATTCTCATGATTGA
Protein sequence

>MS.gene36387.t1

MDCISWDDDSQFVANIPILRNTQPQDFARDYSMSNPSSSVFNYQMQEMQKVESGAGNSWEETLIFQSYPSLSVNIDPPNNYVSLPEFNMAHQPISKSTTTCSLESSLDCLLSATTNSNTDTNSVQDDGISMIFSDCKNRNLWNFSAVSSGESESTYARNKDMQYGFNELDQETVSPASSDQGKIIDNSKVHTTKRTNIDQYDPCFSITTQNSSSSTEFGFKLISEKPPKSKKPRWDNKCPGSSNINFQQPNSSVSLSNSSFEEPDPEAIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISNDPQTVAARQRRERISERIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKELENLGNKIDTMNNCPPANIAFSFNQSIPMQNPNVNIQYSHD