AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36556

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36556.t1 MTR_8g015840 97.129 209 6 0 1 209 10 218 2.09e-151 419
MS.gene36556.t1 MTR_8g079060 56.667 120 50 2 6 123 24 143 2.36e-36 127
MS.gene36556.t1 MTR_2g096740 51.145 131 57 3 6 134 57 182 8.76e-36 127
MS.gene36556.t1 MTR_2g096740 51.145 131 57 3 6 134 72 197 1.31e-35 127
MS.gene36556.t1 MTR_4g063780 61.628 86 32 1 6 91 70 154 6.64e-32 118
MS.gene36556.t1 MTR_1g115590 56.716 134 26 3 1 134 10 111 1.60e-31 112
MS.gene36556.t1 MTR_7g082600 57.812 128 22 3 1 128 1 96 1.41e-30 109
MS.gene36556.t1 MTR_8g479350 81.818 55 10 0 8 62 65 119 2.17e-30 114
MS.gene36556.t1 MTR_7g024670 75.385 65 16 0 12 76 78 142 2.97e-30 114
MS.gene36556.t1 MTR_2g059540 50.000 122 47 2 11 126 31 144 5.33e-30 110
MS.gene36556.t1 MTR_4g088580 65.000 80 26 1 12 89 56 135 5.50e-30 114
MS.gene36556.t1 MTR_4g461080 77.049 61 14 0 2 62 20 80 8.11e-30 111
MS.gene36556.t1 MTR_7g059400 60.638 94 35 2 4 95 68 161 1.89e-29 112
MS.gene36556.t1 MTR_4g022370 52.679 112 38 3 4 102 74 183 3.07e-29 112
MS.gene36556.t1 MTR_4g109980 84.906 53 8 0 9 61 38 90 3.25e-29 111
MS.gene36556.t1 MTR_8g027295 54.545 88 40 0 8 95 21 108 6.33e-29 109
MS.gene36556.t1 MTR_5g031440 75.000 56 14 0 6 61 38 93 1.43e-28 109
MS.gene36556.t1 MTR_8g068210 62.821 78 25 1 11 88 32 105 1.71e-28 109
MS.gene36556.t1 MTR_1g077600 68.750 64 20 0 2 65 34 97 1.22e-27 105
MS.gene36556.t1 MTR_3g091820 71.875 64 16 2 6 68 37 99 1.34e-27 106
MS.gene36556.t1 MTR_1g077600 68.750 64 20 0 2 65 34 97 1.37e-27 106
MS.gene36556.t1 MTR_2g014170 87.755 49 6 0 11 59 45 93 2.04e-27 106
MS.gene36556.t1 MTR_2g030030 56.410 117 20 2 1 117 10 95 4.11e-27 100
MS.gene36556.t1 MTR_3g077750 76.786 56 13 0 6 61 56 111 7.47e-27 105
MS.gene36556.t1 MTR_2g093220 70.492 61 18 0 2 62 31 91 1.85e-26 103
MS.gene36556.t1 MTR_3g090430 84.000 50 8 0 13 62 53 102 2.09e-26 103
MS.gene36556.t1 MTR_4g089095 77.358 53 12 0 9 61 14 66 3.37e-26 102
MS.gene36556.t1 MTR_4g089095 77.358 53 12 0 9 61 48 100 3.59e-26 102
MS.gene36556.t1 MTR_6g012450 60.870 69 27 0 11 79 136 204 3.67e-26 105
MS.gene36556.t1 MTR_2g014060 78.431 51 11 0 12 62 26 76 1.64e-25 101
MS.gene36556.t1 MTR_2g016030 67.857 56 18 0 8 63 44 99 2.20e-25 97.1
MS.gene36556.t1 MTR_1g056810 82.000 50 9 0 13 62 14 63 2.93e-25 100
MS.gene36556.t1 MTR_7g010950 62.857 70 25 1 11 80 135 203 3.51e-25 102
MS.gene36556.t1 MTR_2g013370 78.000 50 11 0 9 58 44 93 5.38e-25 99.0
MS.gene36556.t1 MTR_7g086780 35.519 183 98 4 11 176 99 278 9.81e-25 100
MS.gene36556.t1 MTR_3g435480 57.143 77 33 0 11 87 136 212 1.86e-24 100
MS.gene36556.t1 MTR_5g041530 64.615 65 23 0 11 75 140 204 3.11e-24 98.6
MS.gene36556.t1 MTR_8g044220 69.231 52 16 0 11 62 118 169 5.05e-24 98.6
MS.gene36556.t1 MTR_6g027460 47.561 82 43 0 11 92 96 177 5.96e-24 97.8
MS.gene36556.t1 MTR_5g041420 65.000 60 20 1 3 62 131 189 8.32e-24 96.7
MS.gene36556.t1 MTR_4g082060 69.231 52 16 0 11 62 122 173 1.99e-23 97.4
MS.gene36556.t1 MTR_6g027450 45.977 87 47 0 11 97 89 175 5.35e-23 94.7
MS.gene36556.t1 MTR_5g041380 53.409 88 35 1 11 92 127 214 6.95e-23 94.7
MS.gene36556.t1 MTR_5g041400 56.471 85 29 2 11 87 119 203 3.43e-22 92.8
MS.gene36556.t1 MTR_1g055265 58.974 117 17 2 1 117 10 95 1.01e-21 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36556.t1 AT1G51700 57.664 137 51 2 2 133 24 158 1.21e-45 150
MS.gene36556.t1 AT3G21270 51.007 149 63 4 11 149 29 177 2.33e-33 119
MS.gene36556.t1 AT5G60850 64.368 87 27 1 7 93 47 129 7.93e-33 120
MS.gene36556.t1 AT3G50410 73.973 73 13 2 1 67 14 86 8.30e-33 119
MS.gene36556.t1 AT5G66940 70.423 71 21 0 7 77 28 98 2.06e-32 117
MS.gene36556.t1 AT5G60200 59.302 86 33 1 6 89 50 135 1.20e-30 113
MS.gene36556.t1 AT3G45610 68.831 77 20 3 2 76 32 106 2.49e-30 112
MS.gene36556.t1 AT1G07640 73.438 64 17 0 6 69 16 79 2.55e-30 113
MS.gene36556.t1 AT1G07640 73.438 64 17 0 6 69 72 135 4.74e-30 113
MS.gene36556.t1 AT5G65590 69.014 71 21 1 7 76 37 107 5.87e-30 113
MS.gene36556.t1 AT1G07640 73.438 64 17 0 6 69 80 143 6.90e-30 113
MS.gene36556.t1 AT4G38000 58.242 91 33 1 2 92 32 117 2.26e-29 109
MS.gene36556.t1 AT2G28810 75.439 57 14 0 6 62 72 128 3.82e-29 110
MS.gene36556.t1 AT2G28810 75.439 57 14 0 6 62 89 145 5.08e-29 110
MS.gene36556.t1 AT3G52440 55.208 96 39 1 13 104 27 122 1.59e-28 107
MS.gene36556.t1 AT3G52440 55.208 96 39 1 13 104 46 141 2.36e-28 107
MS.gene36556.t1 AT1G21340 69.565 69 18 1 7 72 31 99 2.68e-28 107
MS.gene36556.t1 AT2G37590 75.862 58 13 1 5 62 84 140 4.05e-28 108
MS.gene36556.t1 AT3G55370 40.000 145 66 3 11 135 76 219 4.73e-28 108
MS.gene36556.t1 AT3G61850 63.889 72 19 1 8 79 59 123 4.94e-28 107
MS.gene36556.t1 AT3G61850 63.889 72 19 1 8 79 59 123 4.94e-28 107
MS.gene36556.t1 AT3G55370 39.610 154 71 4 2 135 113 264 6.08e-28 108
MS.gene36556.t1 AT3G61850 63.889 72 19 1 8 79 71 135 6.66e-28 107
MS.gene36556.t1 AT3G55370 40.000 145 66 3 11 135 76 219 6.72e-28 108
MS.gene36556.t1 AT3G61850 63.889 72 19 1 8 79 59 123 7.82e-28 107
MS.gene36556.t1 AT3G61850 63.889 72 19 1 8 79 71 135 9.38e-28 107
MS.gene36556.t1 AT1G28310 84.615 52 8 0 11 62 27 78 1.30e-27 106
MS.gene36556.t1 AT1G28310 84.615 52 8 0 11 62 51 102 1.82e-27 106
MS.gene36556.t1 AT2G28510 75.806 62 14 1 9 70 46 106 3.72e-27 105
MS.gene36556.t1 AT4G24060 74.138 58 14 1 6 62 47 104 1.26e-26 104
MS.gene36556.t1 AT5G62940 76.786 56 13 0 6 61 68 123 1.44e-26 105
MS.gene36556.t1 AT5G02460 71.667 60 16 1 4 62 87 146 5.70e-26 103
MS.gene36556.t1 AT4G00940 72.414 58 16 0 8 65 65 122 1.37e-25 100
MS.gene36556.t1 AT4G00940 72.414 58 16 0 8 65 65 122 1.37e-25 100
MS.gene36556.t1 AT4G00940 72.414 58 16 0 8 65 65 122 1.37e-25 100
MS.gene36556.t1 AT2G46590 76.471 51 12 0 8 58 65 115 1.94e-25 101
MS.gene36556.t1 AT2G46590 76.471 51 12 0 8 58 77 127 2.37e-25 101
MS.gene36556.t1 AT1G47655 41.209 182 92 4 9 183 27 200 2.75e-25 98.2
MS.gene36556.t1 AT1G64620 75.000 56 13 1 6 60 43 98 3.04e-25 101
MS.gene36556.t1 AT1G29160 73.077 52 14 0 11 62 62 113 3.23e-25 97.1
MS.gene36556.t1 AT4G21050 80.000 50 10 0 13 62 26 75 3.70e-25 97.8
MS.gene36556.t1 AT2G34140 73.077 52 14 0 11 62 58 109 3.88e-25 96.7
MS.gene36556.t1 AT1G69570 73.077 52 14 0 11 62 132 183 5.75e-25 100
MS.gene36556.t1 AT3G47500 61.644 73 27 1 11 83 110 181 9.07e-25 100
MS.gene36556.t1 AT5G39660 59.420 69 28 0 11 79 138 206 9.72e-24 98.2
MS.gene36556.t1 AT5G39660 59.420 69 28 0 11 79 138 206 9.72e-24 98.2
MS.gene36556.t1 AT5G39660 59.420 69 28 0 11 79 138 206 9.72e-24 98.2
MS.gene36556.t1 AT1G26790 69.231 52 16 0 11 62 111 162 2.14e-23 96.3
MS.gene36556.t1 AT5G62430 69.231 52 16 0 11 62 54 105 5.46e-23 94.4
MS.gene36556.t1 AT4G21040 68.519 54 17 0 13 66 27 80 7.40e-23 92.4
MS.gene36556.t1 AT4G21080 51.724 87 36 2 13 99 27 107 2.05e-22 91.7
MS.gene36556.t1 AT4G21030 62.000 50 19 0 13 62 23 72 3.17e-14 68.6

Find 59 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTAAAGGTGGTGCTTTA+AGG 0.163122 8.4:+75597799 MS.gene36556:CDS
TGTTCTTGTTCTGGAAAATT+TGG 0.207790 8.4:-75597672 None:intergenic
ATCTTTCTTGGTTTGCAAAA+TGG 0.257606 8.4:+75598197 MS.gene36556:CDS
CTTGCATCAACTGAGCGATT+TGG 0.269361 8.4:+75598032 MS.gene36556:CDS
TTCTGGAAAATTTGGTTTCA+TGG 0.271012 8.4:-75597664 None:intergenic
CATTTGAGTTGTTCTTGTTC+TGG 0.291270 8.4:-75597681 None:intergenic
CCCGGTTGTGAATACGGATT+TGG 0.293449 8.4:+75598139 MS.gene36556:CDS
GGGGAATCAGAGATCTTTCT+TGG 0.299700 8.4:+75598185 MS.gene36556:CDS
CACCCGGGTCAACATGAATC+TGG 0.303329 8.4:-75597974 None:intergenic
TTGCATCAACTGAGCGATTT+GGG 0.303955 8.4:+75598033 MS.gene36556:CDS
AAATGGGTCGGGTTTGAAAA+TGG 0.305819 8.4:+75598079 MS.gene36556:CDS
GACCCGGGTGAGAGGAATTT+TGG 0.316050 8.4:+75597987 MS.gene36556:CDS
TTGAATTCAGACCTTCAAAA+AGG 0.316361 8.4:-75598058 None:intergenic
CATAACCCGGGTGGTAGAAA+TGG 0.353048 8.4:+75598164 MS.gene36556:CDS
GGGTTTGAAAATGGTGGAAA+TGG 0.363325 8.4:+75598088 MS.gene36556:CDS
TTTGAAGGTCTGAATTCAAA+TGG 0.368494 8.4:+75598062 MS.gene36556:CDS
ATGGTGGAAATGGGTGAATT+TGG 0.397617 8.4:+75598098 MS.gene36556:CDS
CCCAAATCCGTATTCACAAC+CGG 0.400363 8.4:-75598140 None:intergenic
ATAACCCGGGTGGTAGAAAT+GGG 0.416940 8.4:+75598165 MS.gene36556:CDS
AGATGGTGTTGTTGAACGTT+TGG 0.432656 8.4:-75597874 None:intergenic
CTGTGACCCGGTTGTGAATA+CGG 0.450073 8.4:+75598133 MS.gene36556:CDS
TTTCTTGTTCCACCACCAAC+TGG 0.453104 8.4:-75597828 None:intergenic
CCGGTTGTGAATACGGATTT+GGG 0.453312 8.4:+75598140 MS.gene36556:CDS
TGCAAAAGATATTGGACTAA+AGG 0.473852 8.4:+75597786 MS.gene36556:CDS
TCTGGAAAATTTGGTTTCAT+GGG 0.485487 8.4:-75597663 None:intergenic
CCACCAAAATTCCTCTCACC+CGG 0.488376 8.4:-75597990 None:intergenic
TACGGATTTGGGTCATAACC+CGG 0.489454 8.4:+75598151 MS.gene36556:CDS
TTGAAGGTCTGAATTCAAAT+GGG 0.494568 8.4:+75598063 MS.gene36556:CDS
GGTTTGAAAATGGTGGAAAT+GGG 0.507050 8.4:+75598089 MS.gene36556:CDS
GGTCTGAATTCAAATGGGTC+GGG 0.510843 8.4:+75598068 MS.gene36556:CDS
TTTCTTGGTTTGCAAAATGG+TGG 0.514745 8.4:+75598200 MS.gene36556:CDS
AGGTCTGAATTCAAATGGGT+CGG 0.529995 8.4:+75598067 MS.gene36556:CDS
AACTGTTGGAATGATAATCA+TGG 0.536064 8.4:+75598227 MS.gene36556:CDS
GACCCAGATTCATGTTGACC+CGG 0.541258 8.4:+75597971 MS.gene36556:CDS
GGTCAACATGAATCTGGGTC+GGG 0.542667 8.4:-75597968 None:intergenic
GATTCCCCATTTCTACCACC+CGG 0.543789 8.4:-75598170 None:intergenic
ACCCGGGTCAACATGAATCT+GGG 0.549644 8.4:-75597973 None:intergenic
TTCATGTTGACCCGGGTGAG+AGG 0.558997 8.4:+75597979 MS.gene36556:CDS
ATCTTGCTATATACACTCCT+AGG 0.564156 8.4:+75598258 MS.gene36556:CDS
AAAATGGTGGTTCAAACTGT+TGG 0.566836 8.4:+75598213 MS.gene36556:CDS
AGGAACATACCAGTTGGTGG+TGG 0.578156 8.4:+75597819 MS.gene36556:CDS
TGAGAATTTGAACTGTGACC+CGG 0.580599 8.4:+75598121 MS.gene36556:CDS
GGGTCAACATGAATCTGGGT+CGG 0.590125 8.4:-75597969 None:intergenic
CCAAATCCGTATTCACAACC+GGG 0.603508 8.4:-75598139 None:intergenic
TTAAGGAACATACCAGTTGG+TGG 0.605626 8.4:+75597816 MS.gene36556:CDS
GAACTGGTGGTTGATGCTGA+TGG 0.606565 8.4:-75597906 None:intergenic
AAAAGATATTGGACTAAAGG+TGG 0.614735 8.4:+75597789 MS.gene36556:CDS
GCTTTAAGGAACATACCAGT+TGG 0.625252 8.4:+75597813 MS.gene36556:CDS
ACGGATTTGGGTCATAACCC+GGG 0.629532 8.4:+75598152 MS.gene36556:CDS
ACCCAGATTCATGTTGACCC+GGG 0.637927 8.4:+75597972 MS.gene36556:CDS
ATTCCCCATTTCTACCACCC+GGG 0.643173 8.4:-75598169 None:intergenic
ATCTACTGATAAGTTGACCT+AGG 0.648432 8.4:-75598275 None:intergenic
CACCAAAATTCCTCTCACCC+GGG 0.649447 8.4:-75597989 None:intergenic
GTTGGAATGATAATCATGGT+TGG 0.652232 8.4:+75598231 MS.gene36556:CDS
GCTGATGGAGAAGATGAAGA+TGG 0.658893 8.4:-75597891 None:intergenic
TGGGTCGGGTTTGAAAATGG+TGG 0.664103 8.4:+75598082 MS.gene36556:CDS
TAACCCGGGTGGTAGAAATG+GGG 0.710853 8.4:+75598166 MS.gene36556:CDS
GTGTTGCTTGATTCACAACG+TGG 0.731087 8.4:-75597705 None:intergenic
GATTTGGGTCATAACCCGGG+TGG 0.768929 8.4:+75598155 MS.gene36556:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTTGCAGTTTTTGCAAAAA+TGG - chr8.4:75597773-75597792 None:intergenic 25.0%
AAAAGATATTGGACTAAAGG+TGG + chr8.4:75597789-75597808 MS.gene36556:CDS 30.0%
AACTGTTGGAATGATAATCA+TGG + chr8.4:75598227-75598246 MS.gene36556:CDS 30.0%
GCAAAAACTGCAAAAGATAT+TGG + chr8.4:75597778-75597797 MS.gene36556:CDS 30.0%
TGCAAAAGATATTGGACTAA+AGG + chr8.4:75597786-75597805 MS.gene36556:CDS 30.0%
TTGAAGGTCTGAATTCAAAT+GGG + chr8.4:75598063-75598082 MS.gene36556:CDS 30.0%
TTGAATTCAGACCTTCAAAA+AGG - chr8.4:75598061-75598080 None:intergenic 30.0%
TTTGAAGGTCTGAATTCAAA+TGG + chr8.4:75598062-75598081 MS.gene36556:CDS 30.0%
!! ATCTTTCTTGGTTTGCAAAA+TGG + chr8.4:75598197-75598216 MS.gene36556:CDS 30.0%
!! TGTTCTTGTTCTGGAAAATT+TGG - chr8.4:75597675-75597694 None:intergenic 30.0%
AAAATGGTGGTTCAAACTGT+TGG + chr8.4:75598213-75598232 MS.gene36556:CDS 35.0%
GTTGGAATGATAATCATGGT+TGG + chr8.4:75598231-75598250 MS.gene36556:CDS 35.0%
! ATCTTGCTATATACACTCCT+AGG + chr8.4:75598258-75598277 MS.gene36556:CDS 35.0%
! GGTTTGAAAATGGTGGAAAT+GGG + chr8.4:75598089-75598108 MS.gene36556:CDS 35.0%
!! CATTTGAGTTGTTCTTGTTC+TGG - chr8.4:75597684-75597703 None:intergenic 35.0%
!! TTTCTTGGTTTGCAAAATGG+TGG + chr8.4:75598200-75598219 MS.gene36556:CDS 35.0%
AAATGGGTCGGGTTTGAAAA+TGG + chr8.4:75598079-75598098 MS.gene36556:CDS 40.0%
AGGTCTGAATTCAAATGGGT+CGG + chr8.4:75598067-75598086 MS.gene36556:CDS 40.0%
TGAGAATTTGAACTGTGACC+CGG + chr8.4:75598121-75598140 MS.gene36556:CDS 40.0%
TTAAGGAACATACCAGTTGG+TGG + chr8.4:75597816-75597835 MS.gene36556:CDS 40.0%
TTGCATCAACTGAGCGATTT+GGG + chr8.4:75598033-75598052 MS.gene36556:CDS 40.0%
! AACTTTTGCTGCTGAAGAAC+TGG - chr8.4:75597925-75597944 None:intergenic 40.0%
! ATGGTGGAAATGGGTGAATT+TGG + chr8.4:75598098-75598117 MS.gene36556:CDS 40.0%
! CAGTTTTTGCAAAAATGGCG+TGG - chr8.4:75597768-75597787 None:intergenic 40.0%
! GGGTTTGAAAATGGTGGAAA+TGG + chr8.4:75598088-75598107 MS.gene36556:CDS 40.0%
!! AGATGGTGTTGTTGAACGTT+TGG - chr8.4:75597877-75597896 None:intergenic 40.0%
!! CGATTTGGGAACCTTTTTGA+AGG + chr8.4:75598047-75598066 MS.gene36556:CDS 40.0%
!! GCTTTAAGGAACATACCAGT+TGG + chr8.4:75597813-75597832 MS.gene36556:CDS 40.0%
ATAACCCGGGTGGTAGAAAT+GGG + chr8.4:75598165-75598184 MS.gene36556:CDS 45.0%
CCAAATCCGTATTCACAACC+GGG - chr8.4:75598142-75598161 None:intergenic 45.0%
CCCAAATCCGTATTCACAAC+CGG - chr8.4:75598143-75598162 None:intergenic 45.0%
CCGGTTGTGAATACGGATTT+GGG + chr8.4:75598140-75598159 MS.gene36556:CDS 45.0%
CTTGCATCAACTGAGCGATT+TGG + chr8.4:75598032-75598051 MS.gene36556:CDS 45.0%
GCTGATGGAGAAGATGAAGA+TGG - chr8.4:75597894-75597913 None:intergenic 45.0%
GGACTAAAGGTGGTGCTTTA+AGG + chr8.4:75597799-75597818 MS.gene36556:CDS 45.0%
GGGGAATCAGAGATCTTTCT+TGG + chr8.4:75598185-75598204 MS.gene36556:CDS 45.0%
GGTCTGAATTCAAATGGGTC+GGG + chr8.4:75598068-75598087 MS.gene36556:CDS 45.0%
TACGGATTTGGGTCATAACC+CGG + chr8.4:75598151-75598170 MS.gene36556:CDS 45.0%
TTTCTTGTTCCACCACCAAC+TGG - chr8.4:75597831-75597850 None:intergenic 45.0%
! TTTTGCTGCTGAAGAACTGG+TGG - chr8.4:75597922-75597941 None:intergenic 45.0%
!! GTGTTGCTTGATTCACAACG+TGG - chr8.4:75597708-75597727 None:intergenic 45.0%
ACCCAGATTCATGTTGACCC+GGG + chr8.4:75597972-75597991 MS.gene36556:CDS 50.0%
ACCCGGGTCAACATGAATCT+GGG - chr8.4:75597976-75597995 None:intergenic 50.0%
ACGGATTTGGGTCATAACCC+GGG + chr8.4:75598152-75598171 MS.gene36556:CDS 50.0%
ATTCCCCATTTCTACCACCC+GGG - chr8.4:75598172-75598191 None:intergenic 50.0%
CACCAAAATTCCTCTCACCC+GGG - chr8.4:75597992-75598011 None:intergenic 50.0%
CATAACCCGGGTGGTAGAAA+TGG + chr8.4:75598164-75598183 MS.gene36556:CDS 50.0%
CCACCAAAATTCCTCTCACC+CGG - chr8.4:75597993-75598012 None:intergenic 50.0%
CCCGGTTGTGAATACGGATT+TGG + chr8.4:75598139-75598158 MS.gene36556:CDS 50.0%
CTGTGACCCGGTTGTGAATA+CGG + chr8.4:75598133-75598152 MS.gene36556:CDS 50.0%
GACCCAGATTCATGTTGACC+CGG + chr8.4:75597971-75597990 MS.gene36556:CDS 50.0%
GATTCCCCATTTCTACCACC+CGG - chr8.4:75598173-75598192 None:intergenic 50.0%
GGGTCAACATGAATCTGGGT+CGG - chr8.4:75597972-75597991 None:intergenic 50.0%
GGTCAACATGAATCTGGGTC+GGG - chr8.4:75597971-75597990 None:intergenic 50.0%
TAACCCGGGTGGTAGAAATG+GGG + chr8.4:75598166-75598185 MS.gene36556:CDS 50.0%
TGGGTCGGGTTTGAAAATGG+TGG + chr8.4:75598082-75598101 MS.gene36556:CDS 50.0%
! GAACTGGTGGTTGATGCTGA+TGG - chr8.4:75597909-75597928 None:intergenic 50.0%
!! AGGAACATACCAGTTGGTGG+TGG + chr8.4:75597819-75597838 MS.gene36556:CDS 50.0%
!! CGGGTGAGAGGAATTTTGGT+GGG + chr8.4:75597991-75598010 MS.gene36556:CDS 50.0%
!! GGGTGAGAGGAATTTTGGTG+GGG + chr8.4:75597992-75598011 MS.gene36556:CDS 50.0%
!! GGTGAGAGGAATTTTGGTGG+GGG + chr8.4:75597993-75598012 MS.gene36556:CDS 50.0%
!! GTGAGAGGAATTTTGGTGGG+GGG + chr8.4:75597994-75598013 MS.gene36556:CDS 50.0%
CACCCGGGTCAACATGAATC+TGG - chr8.4:75597977-75597996 None:intergenic 55.0%
GATTTGGGTCATAACCCGGG+TGG + chr8.4:75598155-75598174 MS.gene36556:CDS 55.0%
TTCATGTTGACCCGGGTGAG+AGG + chr8.4:75597979-75597998 MS.gene36556:CDS 55.0%
! CCGGGTGAGAGGAATTTTGG+TGG + chr8.4:75597990-75598009 MS.gene36556:CDS 55.0%
! GACCCGGGTGAGAGGAATTT+TGG + chr8.4:75597987-75598006 MS.gene36556:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 75597666 75598295 75597666 ID=MS.gene36556
chr8.4 mRNA 75597666 75598295 75597666 ID=MS.gene36556.t1;Parent=MS.gene36556
chr8.4 exon 75597666 75598295 75597666 ID=MS.gene36556.t1.exon1;Parent=MS.gene36556.t1
chr8.4 CDS 75597666 75598295 75597666 ID=cds.MS.gene36556.t1;Parent=MS.gene36556.t1
Gene Sequence

>MS.gene36556

ATGAAACCAAATTTTCCAGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAGCAACACAAAATTCTGCTACTACAACAACTACAATCTCTCACAACCACGCCATTTTTGCAAAAACTGCAAAAGATATTGGACTAAAGGTGGTGCTTTAAGGAACATACCAGTTGGTGGTGGAACAAGAAAAGTGACAAAACGTTCATCAAATTCCAAACGTTCAACAACACCATCTTCATCTTCTCCATCAGCATCAACCACCAGTTCTTCAGCAGCAAAAGTTTCAGCTTCAGTTTCAGAAACTGACCCGACCCAGATTCATGTTGACCCGGGTGAGAGGAATTTTGGTGGGGGGAGTTTTAGTTCACTTCTTGCATCAACTGAGCGATTTGGGAACCTTTTTGAAGGTCTGAATTCAAATGGGTCGGGTTTGAAAATGGTGGAAATGGGTGAATTTGGTGAGAATTTGAACTGTGACCCGGTTGTGAATACGGATTTGGGTCATAACCCGGGTGGTAGAAATGGGGAATCAGAGATCTTTCTTGGTTTGCAAAATGGTGGTTCAAACTGTTGGAATGATAATCATGGTTGGTCTGATCTTGCTATATACACTCCTAGGTCAACTTATCAGTAG
Protein sequence

>MS.gene36556.t1

MKPNFPEQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGTRKVTKRSSNSKRSTTPSSSSPSASTTSSSAAKVSASVSETDPTQIHVDPGERNFGGGSFSSLLASTERFGNLFEGLNSNGSGLKMVEMGEFGENLNCDPVVNTDLGHNPGGRNGESEIFLGLQNGGSNCWNDNHGWSDLAIYTPRSTYQ