Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36685.t1 | XP_013444240.1 | 95.1 | 431 | 15 | 3 | 1 | 426 | 1 | 430 | 2.60E-227 | 797.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36685.t1 | Q8S3D2 | 47.3 | 317 | 123 | 12 | 110 | 416 | 72 | 354 | 8.8e-51 | 202.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36685.t1 | A0A072TLG8 | 95.1 | 431 | 15 | 3 | 1 | 426 | 1 | 430 | 1.9e-227 | 797.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene36685.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36685.t1 | MTR_8g015450 | 95.128 | 431 | 15 | 3 | 1 | 426 | 1 | 430 | 0.0 | 840 |
MS.gene36685.t1 | MTR_2g100490 | 50.109 | 457 | 106 | 22 | 1 | 414 | 1 | 378 | 2.95e-99 | 301 |
MS.gene36685.t1 | MTR_3g101810 | 46.528 | 144 | 59 | 2 | 269 | 398 | 103 | 242 | 4.02e-36 | 134 |
MS.gene36685.t1 | MTR_8g093500 | 64.948 | 97 | 28 | 2 | 296 | 391 | 87 | 178 | 7.66e-36 | 133 |
MS.gene36685.t1 | MTR_5g017210 | 62.626 | 99 | 33 | 1 | 295 | 393 | 109 | 203 | 9.45e-28 | 110 |
MS.gene36685.t1 | MTR_7g069590 | 56.923 | 65 | 28 | 0 | 333 | 397 | 32 | 96 | 9.30e-20 | 85.9 |
MS.gene36685.t1 | MTR_5g079500 | 57.576 | 66 | 27 | 1 | 324 | 389 | 216 | 280 | 7.69e-17 | 81.3 |
MS.gene36685.t1 | MTR_1g018090 | 60.714 | 56 | 22 | 0 | 336 | 391 | 283 | 338 | 8.51e-17 | 82.0 |
MS.gene36685.t1 | MTR_1g106460 | 48.000 | 75 | 39 | 0 | 317 | 391 | 228 | 302 | 9.78e-16 | 78.2 |
MS.gene36685.t1 | MTR_5g005110 | 53.448 | 58 | 27 | 0 | 334 | 391 | 231 | 288 | 3.24e-15 | 76.6 |
MS.gene36685.t1 | MTR_1g106470 | 53.448 | 58 | 27 | 0 | 334 | 391 | 203 | 260 | 7.91e-15 | 75.1 |
MS.gene36685.t1 | MTR_3g103030 | 49.231 | 65 | 33 | 0 | 327 | 391 | 229 | 293 | 2.36e-14 | 73.9 |
MS.gene36685.t1 | MTR_1g060700 | 48.649 | 74 | 36 | 1 | 319 | 392 | 341 | 412 | 7.52e-14 | 73.6 |
MS.gene36685.t1 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 334 | 389 | 203 | 258 | 1.41e-13 | 72.4 |
MS.gene36685.t1 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 334 | 389 | 206 | 261 | 1.41e-13 | 72.4 |
MS.gene36685.t1 | MTR_2g067000 | 47.887 | 71 | 33 | 1 | 322 | 392 | 156 | 222 | 1.73e-13 | 71.2 |
MS.gene36685.t1 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 334 | 389 | 200 | 255 | 2.64e-13 | 71.2 |
MS.gene36685.t1 | MTR_1g106480 | 50.980 | 51 | 25 | 0 | 339 | 389 | 81 | 131 | 2.59e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36685.t1 | AT3G21330 | 48.265 | 317 | 123 | 12 | 110 | 414 | 72 | 359 | 1.76e-69 | 224 |
MS.gene36685.t1 | AT4G00120 | 54.386 | 114 | 45 | 3 | 299 | 411 | 88 | 195 | 2.48e-31 | 119 |
MS.gene36685.t1 | AT3G50330 | 62.105 | 95 | 32 | 1 | 296 | 390 | 92 | 182 | 1.14e-25 | 104 |
MS.gene36685.t1 | AT5G09750 | 65.263 | 95 | 27 | 2 | 296 | 389 | 92 | 181 | 1.83e-25 | 103 |
MS.gene36685.t1 | AT5G67060 | 61.053 | 95 | 33 | 1 | 296 | 390 | 83 | 173 | 1.84e-25 | 103 |
MS.gene36685.t1 | AT5G67060 | 61.053 | 95 | 33 | 1 | 296 | 390 | 95 | 185 | 2.40e-25 | 103 |
MS.gene36685.t1 | AT5G01305 | 59.677 | 62 | 25 | 0 | 325 | 386 | 35 | 96 | 1.58e-19 | 85.9 |
MS.gene36685.t1 | AT5G43175 | 47.059 | 68 | 36 | 0 | 324 | 391 | 129 | 196 | 6.17e-16 | 77.0 |
MS.gene36685.t1 | AT5G37800 | 53.846 | 65 | 30 | 0 | 325 | 389 | 199 | 263 | 7.63e-16 | 78.2 |
MS.gene36685.t1 | AT1G66470 | 50.000 | 68 | 34 | 0 | 322 | 389 | 190 | 257 | 9.82e-16 | 77.8 |
MS.gene36685.t1 | AT4G33880 | 51.562 | 64 | 31 | 0 | 328 | 391 | 267 | 330 | 1.29e-15 | 78.2 |
MS.gene36685.t1 | AT2G14760 | 51.562 | 64 | 31 | 0 | 328 | 391 | 238 | 301 | 1.54e-15 | 77.8 |
MS.gene36685.t1 | AT4G30980 | 49.367 | 79 | 37 | 2 | 323 | 398 | 125 | 203 | 5.26e-15 | 75.9 |
MS.gene36685.t1 | AT2G24260 | 57.143 | 56 | 24 | 0 | 334 | 389 | 42 | 97 | 7.65e-15 | 74.3 |
MS.gene36685.t1 | AT4G30980 | 49.367 | 79 | 37 | 2 | 323 | 398 | 173 | 251 | 1.02e-14 | 75.5 |
MS.gene36685.t1 | AT1G27740 | 47.059 | 68 | 36 | 0 | 324 | 391 | 164 | 231 | 1.66e-14 | 73.6 |
MS.gene36685.t1 | AT2G24260 | 57.143 | 56 | 24 | 0 | 334 | 389 | 145 | 200 | 2.15e-14 | 74.7 |
MS.gene36685.t1 | AT5G58010 | 41.111 | 90 | 44 | 2 | 321 | 401 | 92 | 181 | 7.03e-14 | 72.4 |
MS.gene36685.t1 | AT2G14760 | 42.857 | 77 | 31 | 1 | 328 | 391 | 238 | 314 | 2.21e-12 | 68.2 |
Find 66 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCTTGGTTTCTTGCATTT+TGG | 0.110710 | 8.2:-77857397 | None:intergenic |
TTCATTTGTGCTATTGCTTC+TGG | 0.163364 | 8.2:-77857508 | None:intergenic |
AAAGAATAAGTGAAAGAATT+AGG | 0.176959 | 8.2:+77857671 | MS.gene36685:CDS |
GCATTTAGACCAGTGAATTT+TGG | 0.189702 | 8.2:+77857553 | MS.gene36685:CDS |
TATCCATGGATGGTCTAAAT+TGG | 0.204516 | 8.2:+77856627 | None:intergenic |
CAACATATTGATGATGAATT+TGG | 0.233252 | 8.2:-77857460 | None:intergenic |
TGAAATGATTGAGGTATTAA+AGG | 0.270091 | 8.2:-77856881 | None:intergenic |
GTTAAGGCACTTGAAAGTTT+AGG | 0.322532 | 8.2:+77857787 | MS.gene36685:CDS |
AAGAATAAGTGAAAGAATTA+GGG | 0.351830 | 8.2:+77857672 | MS.gene36685:CDS |
GAGATGCATAAAGTTCAAAT+TGG | 0.386265 | 8.2:+77856749 | MS.gene36685:CDS |
TGTACCTGGTGGAAGCAAAA+TGG | 0.387485 | 8.2:+77857708 | MS.gene36685:CDS |
ATCTTTACATTCTTCCTCTT+AGG | 0.399260 | 8.2:-77857607 | None:intergenic |
TGTCTTGCAGCAACAGTTTG+TGG | 0.403895 | 8.2:-77857640 | None:intergenic |
CAAGGTCCCTTATCACATCT+TGG | 0.412458 | 8.2:-77857412 | None:intergenic |
CAAGAAACCAAGATGTGATA+AGG | 0.413232 | 8.2:+77857405 | MS.gene36685:CDS |
CTTCTGATTGAAGGTGTGTC+TGG | 0.415917 | 8.2:-77857193 | None:intergenic |
TGGTGGGCCATGTTGAAATC+TGG | 0.417693 | 8.2:-77856938 | None:intergenic |
AAAGAGAAAGCAATACTAGT+TGG | 0.418809 | 8.2:-77857838 | None:intergenic |
GAGTGAGGATTATGATTACT+AGG | 0.423589 | 8.2:-77857880 | None:intergenic |
CATAATTCTTCACCTGTTGA+AGG | 0.428854 | 8.2:+77857346 | MS.gene36685:CDS |
TGGTTGTTGAAAATTGATAT+TGG | 0.428990 | 8.2:-77857440 | None:intergenic |
GACACTTCTGTTGAAAATGA+TGG | 0.438340 | 8.2:+77857028 | MS.gene36685:CDS |
CTGTTGCTGCAAGACATAGA+AGG | 0.446002 | 8.2:+77857647 | MS.gene36685:CDS |
ATCCATGGATGGTCTAAATT+GGG | 0.452946 | 8.2:+77856628 | None:intergenic |
TGTTGAGTACTCCACAAGAT+TGG | 0.454815 | 8.2:-77856677 | None:intergenic |
TAAAGGTTCTTCTCTCCAGC+TGG | 0.468965 | 8.2:-77856864 | None:intergenic |
AGTCTAAAACCACCTTCAAC+AGG | 0.475064 | 8.2:-77857358 | None:intergenic |
AAATCTGGCATAATGTTGTA+AGG | 0.495981 | 8.2:-77856923 | None:intergenic |
GCACTAACACTTCTGATTGA+AGG | 0.496925 | 8.2:-77857202 | None:intergenic |
GTTAGTGCTACAGATGGTAC+TGG | 0.504685 | 8.2:+77857217 | MS.gene36685:CDS |
AGGTAACAAAGTTAATGCTA+TGG | 0.507469 | 8.2:+77857807 | MS.gene36685:CDS |
TGTTGTGAAAGATTTGTGTT+TGG | 0.510255 | 8.2:-77856803 | None:intergenic |
AAGAAACCAAGATGTGATAA+GGG | 0.511131 | 8.2:+77857406 | MS.gene36685:CDS |
TAATCATAATCCTCACTCAC+AGG | 0.514322 | 8.2:+77857885 | MS.gene36685:CDS |
GTAAGGTCTACTGTCTGAAA+AGG | 0.516969 | 8.2:-77856906 | None:intergenic |
AGAAGCAATAGCACAAATGA+AGG | 0.517584 | 8.2:+77857510 | MS.gene36685:CDS |
AGGATTATGATTACTAGGGA+TGG | 0.519072 | 8.2:-77857875 | None:intergenic |
TTACTAGGGATGGGAAAAGA+AGG | 0.524109 | 8.2:-77857865 | None:intergenic |
AATCAAAAGCTGGATCCAGC+TGG | 0.531706 | 8.2:+77856849 | MS.gene36685:CDS |
ATGAAAGTGAAATCAAAAGC+TGG | 0.539625 | 8.2:+77856839 | MS.gene36685:CDS |
ATCCCAATTTAGACCATCCA+TGG | 0.539878 | 8.2:-77856630 | None:intergenic |
GTTTCATCAAATTCATTGAG+TGG | 0.542529 | 8.2:-77857259 | None:intergenic |
TCATCCATTCCAAAATTCAC+TGG | 0.545940 | 8.2:-77857562 | None:intergenic |
GAAAAGGACTGAAATGATTG+AGG | 0.553231 | 8.2:-77856890 | None:intergenic |
GGATTATGATTACTAGGGAT+GGG | 0.558180 | 8.2:-77857874 | None:intergenic |
AGTAACACAGCAACTTCCTC+AGG | 0.560472 | 8.2:+77857103 | MS.gene36685:CDS |
AAGAGAACACACCAATCTTG+TGG | 0.562304 | 8.2:+77856666 | MS.gene36685:CDS |
AACAATCTCTCAGAGTTCCT+CGG | 0.571223 | 8.2:+77857279 | MS.gene36685:CDS |
AGTACTCAACAATTTGAAGA+AGG | 0.576847 | 8.2:+77856689 | MS.gene36685:CDS |
AATTCTTCACCTGTTGAAGG+TGG | 0.582439 | 8.2:+77857349 | MS.gene36685:CDS |
TGGATTGATGTATTGATCCG+AGG | 0.584470 | 8.2:-77857296 | None:intergenic |
TACTAGGGATGGGAAAAGAA+GGG | 0.586236 | 8.2:-77857864 | None:intergenic |
TGTTGCTGCAAGACATAGAA+GGG | 0.587506 | 8.2:+77857648 | MS.gene36685:CDS |
CACTGCTTCAATGCTTGATG+AGG | 0.590511 | 8.2:+77857732 | MS.gene36685:CDS |
AAATTGATATTGGTTGAACA+AGG | 0.601710 | 8.2:-77857430 | None:intergenic |
TCATGTCAACCCTGTGAGTG+AGG | 0.610783 | 8.2:-77857895 | None:intergenic |
TAGAACATCATATCCATGGA+TGG | 0.614303 | 8.2:+77856617 | None:intergenic |
GTTTCAAACAGTACAAGCTA+CGG | 0.621848 | 8.2:+77857142 | MS.gene36685:CDS |
AATCATAATCCTCACTCACA+GGG | 0.622444 | 8.2:+77857886 | MS.gene36685:CDS |
ATGGATGGTCTAAATTGGGA+TGG | 0.624739 | 8.2:+77856632 | MS.gene36685:CDS |
AGTGAGGATTATGATTACTA+GGG | 0.626305 | 8.2:-77857879 | None:intergenic |
AGAAGTGTTAGTGCTACAGA+TGG | 0.646789 | 8.2:+77857211 | MS.gene36685:CDS |
CATTATGCCAGATTTCAACA+TGG | 0.655208 | 8.2:+77856931 | MS.gene36685:CDS |
ACGGAGCACTGACACAAACA+CGG | 0.677008 | 8.2:+77857161 | MS.gene36685:CDS |
ATTACTATCAGTTTCACCTG+AGG | 0.681052 | 8.2:-77857119 | None:intergenic |
TTGCAAAAGATTGTACCTGG+TGG | 0.687101 | 8.2:+77857697 | MS.gene36685:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAATAAGTGAAAGAATT+AGG | + | chr8.2:77857671-77857690 | MS.gene36685:CDS | 20.0% |
!! | AAGAATAAGTGAAAGAATTA+GGG | + | chr8.2:77857672-77857691 | MS.gene36685:CDS | 20.0% |
!!! | CAAATTATCTCAAGTTTTTA+AGG | + | chr8.2:77857758-77857777 | MS.gene36685:CDS | 20.0% |
! | TGGTTGTTGAAAATTGATAT+TGG | - | chr8.2:77857443-77857462 | None:intergenic | 25.0% |
!! | AAATTGATATTGGTTGAACA+AGG | - | chr8.2:77857433-77857452 | None:intergenic | 25.0% |
!! | TGAAATGATTGAGGTATTAA+AGG | - | chr8.2:77856884-77856903 | None:intergenic | 25.0% |
!!! | CAACATATTGATGATGAATT+TGG | - | chr8.2:77857463-77857482 | None:intergenic | 25.0% |
!!! | CTTGATTGTATTGTTTTTCT+TGG | - | chr8.2:77857319-77857338 | None:intergenic | 25.0% |
AAAGAGAAAGCAATACTAGT+TGG | - | chr8.2:77857841-77857860 | None:intergenic | 30.0% | |
AAATCTGGCATAATGTTGTA+AGG | - | chr8.2:77856926-77856945 | None:intergenic | 30.0% | |
AAGAAACCAAGATGTGATAA+GGG | + | chr8.2:77857406-77857425 | MS.gene36685:CDS | 30.0% | |
AGGTAACAAAGTTAATGCTA+TGG | + | chr8.2:77857807-77857826 | MS.gene36685:CDS | 30.0% | |
AGTACTCAACAATTTGAAGA+AGG | + | chr8.2:77856689-77856708 | MS.gene36685:CDS | 30.0% | |
AGTGAGGATTATGATTACTA+GGG | - | chr8.2:77857882-77857901 | None:intergenic | 30.0% | |
ATCTTTACATTCTTCCTCTT+AGG | - | chr8.2:77857610-77857629 | None:intergenic | 30.0% | |
ATGAAAGTGAAATCAAAAGC+TGG | + | chr8.2:77856839-77856858 | MS.gene36685:CDS | 30.0% | |
GAGATGCATAAAGTTCAAAT+TGG | + | chr8.2:77856749-77856768 | MS.gene36685:CDS | 30.0% | |
GTTTCATCAAATTCATTGAG+TGG | - | chr8.2:77857262-77857281 | None:intergenic | 30.0% | |
TAATCGAAAAAAAGCCTAAG+AGG | + | chr8.2:77857593-77857612 | MS.gene36685:CDS | 30.0% | |
TGTTGTGAAAGATTTGTGTT+TGG | - | chr8.2:77856806-77856825 | None:intergenic | 30.0% | |
TTTCTGACTGCAAAAACTTA+TGG | + | chr8.2:77857065-77857084 | MS.gene36685:CDS | 30.0% | |
!! | AGTTGTTGAGTTTTTGTTGT+TGG | - | chr8.2:77856961-77856980 | None:intergenic | 30.0% |
!! | TCTTTTGATTGTTTGCTTTC+AGG | + | chr8.2:77856989-77857008 | MS.gene36685:CDS | 30.0% |
AATCATAATCCTCACTCACA+GGG | + | chr8.2:77857886-77857905 | MS.gene36685:CDS | 35.0% | |
AGAAGCAATAGCACAAATGA+AGG | + | chr8.2:77857510-77857529 | MS.gene36685:CDS | 35.0% | |
AGGATTATGATTACTAGGGA+TGG | - | chr8.2:77857878-77857897 | None:intergenic | 35.0% | |
ATTACTATCAGTTTCACCTG+AGG | - | chr8.2:77857122-77857141 | None:intergenic | 35.0% | |
CAAGAAACCAAGATGTGATA+AGG | + | chr8.2:77857405-77857424 | MS.gene36685:CDS | 35.0% | |
CATAATTCTTCACCTGTTGA+AGG | + | chr8.2:77857346-77857365 | MS.gene36685:CDS | 35.0% | |
CATTATGCCAGATTTCAACA+TGG | + | chr8.2:77856931-77856950 | MS.gene36685:CDS | 35.0% | |
GAAAAGGACTGAAATGATTG+AGG | - | chr8.2:77856893-77856912 | None:intergenic | 35.0% | |
GACACTTCTGTTGAAAATGA+TGG | + | chr8.2:77857028-77857047 | MS.gene36685:CDS | 35.0% | |
GAGTGAGGATTATGATTACT+AGG | - | chr8.2:77857883-77857902 | None:intergenic | 35.0% | |
GGATTATGATTACTAGGGAT+GGG | - | chr8.2:77857877-77857896 | None:intergenic | 35.0% | |
GTTTCAAACAGTACAAGCTA+CGG | + | chr8.2:77857142-77857161 | MS.gene36685:CDS | 35.0% | |
TAATCATAATCCTCACTCAC+AGG | + | chr8.2:77857885-77857904 | MS.gene36685:CDS | 35.0% | |
TCATCCATTCCAAAATTCAC+TGG | - | chr8.2:77857565-77857584 | None:intergenic | 35.0% | |
! | CATCTTGGTTTCTTGCATTT+TGG | - | chr8.2:77857400-77857419 | None:intergenic | 35.0% |
! | GCATTTAGACCAGTGAATTT+TGG | + | chr8.2:77857553-77857572 | MS.gene36685:CDS | 35.0% |
! | GTTAAGGCACTTGAAAGTTT+AGG | + | chr8.2:77857787-77857806 | MS.gene36685:CDS | 35.0% |
! | GTTTTGCAAAAGATTGTACC+TGG | + | chr8.2:77857694-77857713 | MS.gene36685:CDS | 35.0% |
! | TTCATTTGTGCTATTGCTTC+TGG | - | chr8.2:77857511-77857530 | None:intergenic | 35.0% |
!! | TAGACCAGTGAATTTTGGAA+TGG | + | chr8.2:77857558-77857577 | MS.gene36685:CDS | 35.0% |
!!! | GTTGAGTTTTTGTTGTTGGT+GGG | - | chr8.2:77856957-77856976 | None:intergenic | 35.0% |
!!! | GTTTTTAAGGTCACAGGTTA+AGG | + | chr8.2:77857771-77857790 | MS.gene36685:CDS | 35.0% |
!!! | TCTCAAGTTTTTAAGGTCAC+AGG | + | chr8.2:77857765-77857784 | MS.gene36685:CDS | 35.0% |
!!! | TGTTGAGTTTTTGTTGTTGG+TGG | - | chr8.2:77856958-77856977 | None:intergenic | 35.0% |
AACAATCTCTCAGAGTTCCT+CGG | + | chr8.2:77857279-77857298 | MS.gene36685:CDS | 40.0% | |
AAGAGAACACACCAATCTTG+TGG | + | chr8.2:77856666-77856685 | MS.gene36685:CDS | 40.0% | |
AATTCTTCACCTGTTGAAGG+TGG | + | chr8.2:77857349-77857368 | MS.gene36685:CDS | 40.0% | |
ATGGATGGTCTAAATTGGGA+TGG | + | chr8.2:77856632-77856651 | MS.gene36685:CDS | 40.0% | |
GCACTAACACTTCTGATTGA+AGG | - | chr8.2:77857205-77857224 | None:intergenic | 40.0% | |
GTAAGGTCTACTGTCTGAAA+AGG | - | chr8.2:77856909-77856928 | None:intergenic | 40.0% | |
TACTAGGGATGGGAAAAGAA+GGG | - | chr8.2:77857867-77857886 | None:intergenic | 40.0% | |
TGTTGAGTACTCCACAAGAT+TGG | - | chr8.2:77856680-77856699 | None:intergenic | 40.0% | |
TGTTGCTGCAAGACATAGAA+GGG | + | chr8.2:77857648-77857667 | MS.gene36685:CDS | 40.0% | |
TTACTAGGGATGGGAAAAGA+AGG | - | chr8.2:77857868-77857887 | None:intergenic | 40.0% | |
TTGCAAAAGATTGTACCTGG+TGG | + | chr8.2:77857697-77857716 | MS.gene36685:CDS | 40.0% | |
! | AGTCTAAAACCACCTTCAAC+AGG | - | chr8.2:77857361-77857380 | None:intergenic | 40.0% |
! | CTTGGTTTCTTGCATTTTGG+TGG | - | chr8.2:77857397-77857416 | None:intergenic | 40.0% |
! | TGGATTGATGTATTGATCCG+AGG | - | chr8.2:77857299-77857318 | None:intergenic | 40.0% |
!! | AGAAGTGTTAGTGCTACAGA+TGG | + | chr8.2:77857211-77857230 | MS.gene36685:CDS | 40.0% |
AATCAAAAGCTGGATCCAGC+TGG | + | chr8.2:77856849-77856868 | MS.gene36685:CDS | 45.0% | |
AGTAACACAGCAACTTCCTC+AGG | + | chr8.2:77857103-77857122 | MS.gene36685:CDS | 45.0% | |
CAAGGTCCCTTATCACATCT+TGG | - | chr8.2:77857415-77857434 | None:intergenic | 45.0% | |
CACTGCTTCAATGCTTGATG+AGG | + | chr8.2:77857732-77857751 | MS.gene36685:CDS | 45.0% | |
CTGTTGCTGCAAGACATAGA+AGG | + | chr8.2:77857647-77857666 | MS.gene36685:CDS | 45.0% | |
GTTAGTGCTACAGATGGTAC+TGG | + | chr8.2:77857217-77857236 | MS.gene36685:CDS | 45.0% | |
TAAAGGTTCTTCTCTCCAGC+TGG | - | chr8.2:77856867-77856886 | None:intergenic | 45.0% | |
TGTACCTGGTGGAAGCAAAA+TGG | + | chr8.2:77857708-77857727 | MS.gene36685:CDS | 45.0% | |
TGTCTTGCAGCAACAGTTTG+TGG | - | chr8.2:77857643-77857662 | None:intergenic | 45.0% | |
! | CTTCTGATTGAAGGTGTGTC+TGG | - | chr8.2:77857196-77857215 | None:intergenic | 45.0% |
! | GTGTCCATTTTGCTTCCACC+AGG | - | chr8.2:77857715-77857734 | None:intergenic | 50.0% |
! | TGGTGGGCCATGTTGAAATC+TGG | - | chr8.2:77856941-77856960 | None:intergenic | 50.0% |
!! | ACGGAGCACTGACACAAACA+CGG | + | chr8.2:77857161-77857180 | MS.gene36685:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 77856632 | 77857912 | 77856632 | ID=MS.gene36685 |
chr8.2 | mRNA | 77856632 | 77857912 | 77856632 | ID=MS.gene36685.t1;Parent=MS.gene36685 |
chr8.2 | exon | 77856632 | 77857912 | 77856632 | ID=MS.gene36685.t1.exon1;Parent=MS.gene36685.t1 |
chr8.2 | CDS | 77856632 | 77857912 | 77856632 | ID=cds.MS.gene36685.t1;Parent=MS.gene36685.t1 |
Gene Sequence |
Protein sequence |