AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36768

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36768.t1 MTR_8g014050 92.083 480 14 1 102 557 212 691 0.0 921
MS.gene36768.t1 MTR_3g110240 77.273 484 82 3 102 557 198 681 0.0 783
MS.gene36768.t1 MTR_1g007150 75.826 484 89 3 102 557 201 684 0.0 767
MS.gene36768.t1 MTR_7g006030 71.250 480 112 3 102 556 120 598 0.0 726
MS.gene36768.t1 MTR_7g085540 69.167 480 122 3 102 556 229 707 0.0 700
MS.gene36768.t1 MTR_1g116210 68.333 480 126 3 102 556 197 675 0.0 698
MS.gene36768.t1 MTR_2g039930 37.436 195 92 4 103 270 1 192 5.87e-32 127
MS.gene36768.t1 MTR_2g039930 37.245 196 93 4 102 270 81 273 8.53e-32 128
MS.gene36768.t1 MTR_4g126010 37.245 196 93 5 102 270 81 273 9.98e-32 128
MS.gene36768.t1 MTR_8g102930 41.667 156 85 3 118 270 121 273 1.58e-31 127
MS.gene36768.t1 MTR_2g099670 36.735 196 94 5 102 270 29 221 1.85e-31 127
MS.gene36768.t1 MTR_1g075870 37.186 199 95 5 99 270 22 217 3.00e-31 123
MS.gene36768.t1 MTR_2g099670 36.735 196 94 5 102 270 81 273 3.31e-31 127
MS.gene36768.t1 MTR_1g042280 36.683 199 96 4 99 270 47 242 3.55e-31 123
MS.gene36768.t1 MTR_6g087070 37.245 196 93 5 102 270 81 273 5.31e-31 125
MS.gene36768.t1 MTR_1g075870 37.186 199 95 5 99 270 79 274 5.50e-31 123
MS.gene36768.t1 MTR_1g069720 36.683 199 96 5 99 270 78 273 1.37e-30 124
MS.gene36768.t1 MTR_1g042280 37.186 199 95 5 99 270 79 274 1.94e-30 124
MS.gene36768.t1 MTR_1g075870 37.186 199 95 5 99 270 79 274 4.77e-30 123
MS.gene36768.t1 MTR_8g018310 36.788 193 91 6 99 264 78 266 1.11e-29 121
MS.gene36768.t1 MTR_8g018310 36.842 190 89 6 102 264 81 266 1.26e-29 122
MS.gene36768.t1 MTR_7g097160 36.683 199 96 5 99 270 78 273 1.93e-29 121
MS.gene36768.t1 MTR_1g004990 35.377 212 114 7 66 270 78 273 3.22e-28 117
MS.gene36768.t1 MTR_3g110180 37.821 156 91 3 118 270 121 273 9.67e-27 113
MS.gene36768.t1 MTR_0492s0030 35.323 201 98 5 99 270 78 275 1.41e-26 111
MS.gene36768.t1 MTR_0543s0020 35.323 201 98 5 99 270 78 275 1.41e-26 111
MS.gene36768.t1 MTR_3g110180 37.821 156 90 4 118 270 121 272 3.09e-25 108
MS.gene36768.t1 MTR_7g097160 41.985 131 72 2 143 270 25 154 6.04e-24 103
MS.gene36768.t1 MTR_4g024710 61.290 62 24 0 40 101 199 260 5.16e-14 73.9
MS.gene36768.t1 MTR_8g014260 63.333 60 22 0 40 99 302 361 1.96e-13 73.2
MS.gene36768.t1 MTR_8g445780 59.375 64 26 0 38 101 286 349 6.19e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36768.t1 AT2G25760 75.155 483 93 2 102 557 191 673 0.0 777
MS.gene36768.t1 AT2G25760 74.280 486 95 3 102 557 191 676 0.0 767
MS.gene36768.t1 AT3G13670 68.595 484 124 3 102 557 220 703 0.0 704
MS.gene36768.t1 AT3G03940 68.542 480 125 3 102 556 222 700 0.0 702
MS.gene36768.t1 AT5G18190 69.167 480 122 3 102 556 212 690 0.0 698
MS.gene36768.t1 AT5G18190 69.167 480 122 3 102 556 212 690 0.0 698
MS.gene36768.t1 AT3G03930 65.714 245 83 1 313 556 43 287 2.46e-117 349
MS.gene36768.t1 AT4G28860 37.313 201 96 5 97 270 76 273 6.83e-33 130
MS.gene36768.t1 AT4G28880 37.811 201 95 5 97 270 76 273 7.97e-33 130
MS.gene36768.t1 AT4G28880 37.811 201 95 5 97 270 76 273 7.97e-33 130
MS.gene36768.t1 AT4G28880 37.811 201 95 5 97 270 76 273 7.97e-33 130
MS.gene36768.t1 AT4G28880 37.811 201 95 5 97 270 76 273 7.97e-33 130
MS.gene36768.t1 AT4G28860 37.313 201 96 5 97 270 76 273 1.72e-32 129
MS.gene36768.t1 AT4G26100 37.245 196 93 5 102 270 81 273 1.10e-31 128
MS.gene36768.t1 AT4G28540 36.683 199 96 5 99 270 82 277 2.05e-31 127
MS.gene36768.t1 AT2G19470 37.245 196 93 5 102 270 81 273 2.76e-31 126
MS.gene36768.t1 AT5G57015 36.181 199 97 5 99 270 78 273 1.10e-30 124
MS.gene36768.t1 AT3G23340 36.683 199 96 5 99 270 64 259 3.01e-30 123
MS.gene36768.t1 AT3G23340 36.683 199 96 5 99 270 78 273 3.27e-30 123
MS.gene36768.t1 AT1G03930 35.176 199 99 5 99 270 78 273 7.12e-30 123
MS.gene36768.t1 AT5G44100 35.714 196 96 5 102 270 81 273 9.81e-30 122
MS.gene36768.t1 AT5G44100 35.714 196 96 5 102 270 81 273 9.81e-30 122
MS.gene36768.t1 AT5G43320 36.181 199 97 4 99 270 78 273 1.12e-29 120
MS.gene36768.t1 AT5G43320 36.181 199 97 4 99 270 78 273 1.12e-29 120
MS.gene36768.t1 AT4G14340 35.714 196 96 4 102 270 87 279 1.44e-29 120
MS.gene36768.t1 AT5G43320 36.181 199 97 4 99 270 78 273 1.51e-29 122
MS.gene36768.t1 AT4G14340 35.714 196 96 4 102 270 87 279 3.37e-29 120
MS.gene36768.t1 AT1G72710 36.735 196 93 6 102 270 81 272 5.54e-29 120
MS.gene36768.t1 AT1G04440 35.678 199 98 4 99 270 78 273 7.18e-29 120
MS.gene36768.t1 AT4G08800 39.103 156 83 3 118 270 95 241 6.66e-28 113

Find 127 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCTCTTCATCGTACTTTA+AGG 0.153231 8.2:+78980158 None:intergenic
GCCATCATCACTTAATATTA+AGG 0.205425 8.2:+78982172 None:intergenic
TGTTCAACAAACTCTTTAAA+AGG 0.210064 8.2:+78980189 None:intergenic
TGAAGTAAATGTTGAAATTT+CGG 0.249188 8.2:+78981738 None:intergenic
TTCTTCTTCTTAAAGCTTGT+TGG 0.271001 8.2:-78979968 MS.gene36768:intron
ACAACCATTGTTTACATTGA+TGG 0.271366 8.2:-78982209 MS.gene36768:CDS
TGTATGATTGCTGCAAATAC+TGG 0.283787 8.2:+78978839 None:intergenic
GTATTCAGTGGCCTAATGTC+TGG 0.288661 8.2:+78980087 None:intergenic
TCGGGCTTGCAGCTACTAAA+TGG 0.289201 8.2:-78980640 MS.gene36768:intron
TGTAAGCAGGAGGGATGATT+TGG 0.299076 8.2:-78980427 MS.gene36768:CDS
ACCTGAAAAGATCAGGCTTT+TGG 0.301833 8.2:+78980582 None:intergenic
GGGAGTAGTTATGTCTAAAA+AGG 0.321587 8.2:-78978725 MS.gene36768:CDS
TACTATATCACTGCAGTTGC+AGG 0.322061 8.2:-78978992 MS.gene36768:CDS
TGGCCACAGCAGGGCCCAAA+TGG 0.322638 8.2:-78978747 MS.gene36768:CDS
TGCAAGTGTGCATGCACATT+TGG 0.331562 8.2:-78980457 MS.gene36768:CDS
AGACATAACTACTCCCCATT+TGG 0.344476 8.2:+78978732 None:intergenic
GGGCCTGTGGGCCTTAATAA+TGG 0.345557 8.2:-78979252 MS.gene36768:CDS
CACATCGACTGCTGCAACTT+GGG 0.347827 8.2:-78978522 MS.gene36768:CDS
TCTCTATTTGATGGGATTGT+TGG 0.347932 8.2:-78980117 MS.gene36768:CDS
AAATACATTTCTCTATTTGA+TGG 0.352583 8.2:-78980126 MS.gene36768:CDS
TGTCCCTGCATCCATTATTA+AGG 0.355727 8.2:+78979241 None:intergenic
GTGCAGATTATGGATATTCT+AGG 0.366603 8.2:-78981274 MS.gene36768:intron
ATCTTGAACTCATTCTTCCT+TGG 0.367920 8.2:-78981716 MS.gene36768:CDS
AAATTGTTCCTGGTAGATCT+TGG 0.375545 8.2:-78980757 MS.gene36768:CDS
TTGGTCCAAACCCAGACATT+AGG 0.375997 8.2:-78980098 MS.gene36768:CDS
AGTGGCCTAATGTCTGGGTT+TGG 0.378824 8.2:+78980093 None:intergenic
GTGATTCATTTCCTTTCAAA+TGG 0.385845 8.2:-78978810 MS.gene36768:CDS
TAGCAGTGTTGCTTCATCTC+AGG 0.389104 8.2:-78979273 MS.gene36768:CDS
GCAAGTGTGCATGCACATTT+GGG 0.389446 8.2:-78980456 MS.gene36768:CDS
GACATAACTACTCCCCATTT+GGG 0.392485 8.2:+78978733 None:intergenic
CAACAAACTCTTTAAAAGGC+TGG 0.396910 8.2:+78980193 None:intergenic
ACAAAGGATATCAAGTTTGC+AGG 0.398279 8.2:-78980260 MS.gene36768:CDS
TTCGGAAAACGTAGATCAAT+GGG 0.398852 8.2:+78981756 None:intergenic
TTCCTGGTAGATCTTGGATT+GGG 0.405911 8.2:-78980751 MS.gene36768:intron
TGCTTCATCTCAGGGCCTGT+GGG 0.413274 8.2:-78979264 MS.gene36768:CDS
TTCTTCGAAGTCGTCTTCCT+TGG 0.416102 8.2:-78980377 MS.gene36768:CDS
ATTCACAAGCGGTGGGAGTC+TGG 0.427074 8.2:-78978554 MS.gene36768:CDS
AACAAACTCTTTAAAAGGCT+GGG 0.435906 8.2:+78980194 None:intergenic
GGCCACAGCAGGGCCCAAAT+GGG 0.439996 8.2:-78978746 MS.gene36768:CDS
GCAGTTGCAGGAATTGCAAA+TGG 0.440109 8.2:-78978980 MS.gene36768:CDS
TTACATTGATGGTAAAAGAA+TGG 0.440508 8.2:-78982198 MS.gene36768:CDS
AGCAGTGTTGCTTCATCTCA+GGG 0.451254 8.2:-78979272 MS.gene36768:CDS
AATAAATACCTGAAAAGATC+AGG 0.451526 8.2:+78980575 None:intergenic
TTGCTTCATCTCAGGGCCTG+TGG 0.457116 8.2:-78979265 MS.gene36768:CDS
AATACATTTCTCTATTTGAT+GGG 0.458420 8.2:-78980125 MS.gene36768:CDS
TCACATCGACTGCTGCAACT+TGG 0.459764 8.2:-78978523 MS.gene36768:CDS
TCCCCATTTGGGCCCTGCTG+TGG 0.465176 8.2:+78978744 None:intergenic
GGAAGAAGCAATGTTTCGTT+GGG 0.466468 8.2:-78982124 MS.gene36768:CDS
TACATTGCCTCTATTTGCTA+TGG 0.467256 8.2:-78978300 MS.gene36768:CDS
AGTGTATACCTTTGTTTCAT+CGG 0.467387 8.2:+78979836 None:intergenic
GAATACAGAAGGTGCACAAA+AGG 0.476772 8.2:-78980070 MS.gene36768:intron
GTAACTTCAATGGCCACAGC+AGG 0.478584 8.2:-78978757 MS.gene36768:CDS
TCAAGTTTGCAGGAAGAAGA+TGG 0.481989 8.2:-78980250 MS.gene36768:CDS
TTTCGGAAAACGTAGATCAA+TGG 0.482372 8.2:+78981755 None:intergenic
TTAATAATGGATGCAGGGAC+AGG 0.483674 8.2:-78979239 MS.gene36768:CDS
TATTCAGTGGCCTAATGTCT+GGG 0.488062 8.2:+78980088 None:intergenic
CGTGTACAAGCAGCATCTAC+CGG 0.488894 8.2:-78981784 MS.gene36768:intron
AAATGGCGGGATAGTACAAC+TGG 0.491011 8.2:-78980623 MS.gene36768:CDS
CCCACCTTAACATGAGTACT+AGG 0.494087 8.2:+78978419 None:intergenic
ACACTAATCCACTGGTTCGC+TGG 0.494569 8.2:+78979875 None:intergenic
TCTTCCTTGGCAAGGATACC+AGG 0.496876 8.2:-78980364 MS.gene36768:intron
GCAAATGACATCTGTGAAGC+AGG 0.497041 8.2:+78981670 None:intergenic
GACCTAGCTTGTATGATGAA+TGG 0.497272 8.2:-78981252 MS.gene36768:CDS
GTTCCTGGTAGATCTTGGAT+TGG 0.502343 8.2:-78980752 MS.gene36768:CDS
AAGCTTGTTGGTCATAAAAG+AGG 0.502392 8.2:-78979956 MS.gene36768:CDS
TTGCAGCAGTCGATGTGATT+CGG 0.503800 8.2:+78978528 None:intergenic
ACCTTAATATTAAGTGATGA+TGG 0.505932 8.2:-78982173 MS.gene36768:CDS
TGGAAGAAGCAATGTTTCGT+TGG 0.507507 8.2:-78982125 MS.gene36768:CDS
TAGTACAACTGGTTTGCATA+AGG 0.507598 8.2:-78980612 MS.gene36768:CDS
TGGGCCTTAATAATGGATGC+AGG 0.508902 8.2:-78979245 MS.gene36768:CDS
CGCTTGTGAATCCCTTCACT+AGG 0.518944 8.2:+78978566 None:intergenic
AGGAATGGATCATGGAGCAG+TGG 0.525099 8.2:-78979024 MS.gene36768:CDS
CATCATCTTCTGAAGCCAAT+CGG 0.526443 8.2:+78979933 None:intergenic
CGTAGATCAATGGGGCCACC+CGG 0.528512 8.2:+78981765 None:intergenic
TGTGCACCTTCTGTATTCAG+TGG 0.543491 8.2:+78980075 None:intergenic
GTATGATTGCTGCAAATACT+GGG 0.548340 8.2:+78978840 None:intergenic
GGTTCGTCCATAGCAAATAG+AGG 0.550085 8.2:+78978293 None:intergenic
CAAGTTTGCAGGAAGAAGAT+GGG 0.559140 8.2:-78980249 MS.gene36768:CDS
CAGTTGCAGGAATTGCAAAT+GGG 0.559687 8.2:-78978979 MS.gene36768:CDS
TACTCAGAACAAAAGCAGCT+TGG 0.563974 8.2:+78978498 None:intergenic
CGAAGTCGTCTTCCTTGGCA+AGG 0.564008 8.2:-78980372 MS.gene36768:CDS
GTGAAGGGATTCACAAGCGG+TGG 0.565396 8.2:-78978562 MS.gene36768:CDS
TTTACCATCAATGTAAACAA+TGG 0.568887 8.2:+78982205 None:intergenic
CATTGTAAACACTAATCCAC+TGG 0.570715 8.2:+78979867 None:intergenic
GGATCAGCAGTCTCAAGAAA+CGG 0.572690 8.2:+78978272 None:intergenic
TATTCCAGAAAAGAAGCTGC+AGG 0.574242 8.2:-78978477 MS.gene36768:CDS
CATCCATTATTAAGGCCCAC+AGG 0.574889 8.2:+78979249 None:intergenic
ACAAACTCTTTAAAAGGCTG+GGG 0.575409 8.2:+78980195 None:intergenic
GCCACAGCAGGGCCCAAATG+GGG 0.575703 8.2:-78978745 MS.gene36768:CDS
TGGTCATAAAAGAGGCCGAT+TGG 0.576508 8.2:-78979948 MS.gene36768:CDS
ACGAAACTCAAGAAACACTA+AGG 0.576890 8.2:-78978454 MS.gene36768:CDS
TGGGTTTACCAGCGAACCAG+TGG 0.579970 8.2:-78979883 MS.gene36768:CDS
TTCCATTCATCATACAAGCT+AGG 0.582966 8.2:+78981250 None:intergenic
ATTTGGGGAGAAATGTAAGC+AGG 0.584848 8.2:-78980440 MS.gene36768:CDS
GCTTGCAGCTACTAAATGGC+GGG 0.587846 8.2:-78980636 MS.gene36768:intron
GGAATGGATCATGGAGCAGT+GGG 0.590532 8.2:-78979023 MS.gene36768:CDS
GCACATTGACAAAGGAAATG+AGG 0.597073 8.2:-78979309 MS.gene36768:CDS
GTGTACAAGCAGCATCTACC+GGG 0.597326 8.2:-78981783 MS.gene36768:intron
GGGGAGAAATGTAAGCAGGA+GGG 0.597338 8.2:-78980436 MS.gene36768:CDS
CTCGTAGACCGATGAAACAA+AGG 0.600975 8.2:-78979844 MS.gene36768:intron
GTTGAGTTGTTCAACAGCAA+CGG 0.603628 8.2:-78982087 MS.gene36768:intron
TGCAAAATGTAGTGGACTGG+TGG 0.608145 8.2:-78982145 MS.gene36768:CDS
TATATGGGTAGGTATGTGCA+TGG 0.608359 8.2:-78980835 MS.gene36768:intron
TCATTAGTAGTAATGTCTGA+AGG 0.615354 8.2:-78978953 MS.gene36768:intron
GGGCCTTAATAATGGATGCA+GGG 0.621365 8.2:-78979244 MS.gene36768:CDS
TGAAGGGATTCACAAGCGGT+GGG 0.622289 8.2:-78978561 MS.gene36768:CDS
CTATCACAGCACATTGACAA+AGG 0.627189 8.2:-78979317 MS.gene36768:CDS
AGCAAATAGAGGCAATGTAG+AGG 0.629682 8.2:+78978304 None:intergenic
TGGGGAGAAATGTAAGCAGG+AGG 0.632710 8.2:-78980437 MS.gene36768:CDS
TAACTTCAATGGCCACAGCA+GGG 0.633038 8.2:-78978756 MS.gene36768:CDS
TACCCAATCCAAGATCTACC+AGG 0.633951 8.2:+78980749 None:intergenic
ACTTGCAAAATGTAGTGGAC+TGG 0.634687 8.2:-78982148 MS.gene36768:CDS
ATTGACAAAGGAAATGAGGA+TGG 0.636401 8.2:-78979305 MS.gene36768:CDS
GGCTTGCAGCTACTAAATGG+CGG 0.641749 8.2:-78980637 MS.gene36768:intron
CAAACCTGGTATCCTTGCCA+AGG 0.651457 8.2:+78980360 None:intergenic
ATTAGGCCACTGAATACAGA+AGG 0.651859 8.2:-78980081 MS.gene36768:CDS
TGTGCATGGAGATGTGAAGC+CGG 0.653590 8.2:-78980821 MS.gene36768:CDS
TGGCAACTTGCAAAATGTAG+TGG 0.655852 8.2:-78982153 MS.gene36768:CDS
AGAAAACTTGAGTCAAACCA+AGG 0.663229 8.2:+78981699 None:intergenic
GCTTGTGAATCCCTTCACTA+GGG 0.666181 8.2:+78978567 None:intergenic
TTTCTCATCTGGTGTCCCAG+AGG 0.671719 8.2:+78980780 None:intergenic
CTAGTGAAGGGATTCACAAG+CGG 0.705426 8.2:-78978565 MS.gene36768:CDS
AAACAGCATAGGTTCTCTGG+AGG 0.707203 8.2:+78980222 None:intergenic
TACAAGCAGCATCTACCGGG+TGG 0.711092 8.2:-78981780 MS.gene36768:intron
GTGCATGCACACTTGCATAG+CGG 0.719690 8.2:+78980463 None:intergenic
CAAGTGTGCATGCACATTTG+GGG 0.753924 8.2:-78980455 MS.gene36768:CDS
TCGGAAAACGTAGATCAATG+GGG 0.764064 8.2:+78981757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATAATAAAAATAAT+TGG - chr8.2:78979612-78979631 MS.gene36768:intron 0.0%
!!! GTTTTATTTTTTAATCATTT+GGG - chr8.2:78979076-78979095 MS.gene36768:intron 10.0%
!! ACTTTATGTTTATGTATAAT+AGG - chr8.2:78981887-78981906 MS.gene36768:intron 15.0%
!! ATAGATTTAAATTTACCTTA+TGG + chr8.2:78981325-78981344 None:intergenic 15.0%
!! TTGAATATAAAAAGAAACAT+AGG - chr8.2:78978611-78978630 MS.gene36768:intron 15.0%
!!! AGGAAGTTTATTTAATTTTT+TGG - chr8.2:78978926-78978945 MS.gene36768:intron 15.0%
!!! ATCATATGAAAAATATTTTC+AGG - chr8.2:78980005-78980024 MS.gene36768:intron 15.0%
!!! GGTTTTATTTTTTAATCATT+TGG - chr8.2:78979075-78979094 MS.gene36768:intron 15.0%
!!! GTTTTTGATTGATTATTTAT+TGG - chr8.2:78979774-78979793 MS.gene36768:intron 15.0%
!!! TCATATGAAAAATATTTTCA+GGG - chr8.2:78980006-78980025 MS.gene36768:intron 15.0%
!!! TTTAAAACTTATAGATGAAA+GGG - chr8.2:78981094-78981113 MS.gene36768:intron 15.0%
!!! TTTATTTAACCTTTTTTCTA+AGG - chr8.2:78978906-78978925 MS.gene36768:intron 15.0%
!!! TTTTTTTTAATCCATTTGAA+AGG + chr8.2:78981703-78981722 None:intergenic 15.0%
!! AAAAGAAACATAGGAAATTA+TGG - chr8.2:78978620-78978639 MS.gene36768:intron 20.0%
!! AAATACATTTCTCTATTTGA+TGG - chr8.2:78980373-78980392 MS.gene36768:CDS 20.0%
!! AATAAACTTCCTTAGAAAAA+AGG + chr8.2:78978918-78978937 None:intergenic 20.0%
!! AATACATTTCTCTATTTGAT+GGG - chr8.2:78980374-78980393 MS.gene36768:CDS 20.0%
!! AATTTACCTTATGGAAAAAT+TGG + chr8.2:78981316-78981335 None:intergenic 20.0%
!! ACATTAAAAAAAAACACAAG+TGG + chr8.2:78980469-78980488 None:intergenic 20.0%
!! AGAATATTTAGTTGAAGAAT+TGG + chr8.2:78978543-78978562 None:intergenic 20.0%
!! ATTTACCTTATGGAAAAATT+GGG + chr8.2:78981315-78981334 None:intergenic 20.0%
!! TGAAGTAAATGTTGAAATTT+CGG + chr8.2:78978764-78978783 None:intergenic 20.0%
!! TGATACGAGTTAATATAATA+TGG + chr8.2:78979989-78980008 None:intergenic 20.0%
!! TTAAAACTTATAGATGAAAG+GGG - chr8.2:78981095-78981114 MS.gene36768:intron 20.0%
!! TTATGTTTATGTATAATAGG+CGG - chr8.2:78981890-78981909 MS.gene36768:intron 20.0%
!!! AAATTTTAATCCTAGTTTCA+AGG - chr8.2:78981413-78981432 MS.gene36768:intron 20.0%
!!! ACATTTCTTTTATTTGAGTT+TGG - chr8.2:78979163-78979182 MS.gene36768:intron 20.0%
!!! CAAATGGATTAAAAAAAAGT+GGG - chr8.2:78981705-78981724 MS.gene36768:CDS 20.0%
!!! CATATGAAAAATATTTTCAG+GGG - chr8.2:78980007-78980026 MS.gene36768:intron 20.0%
!!! CGTTACATTTTTTAATCTTT+TGG - chr8.2:78981039-78981058 MS.gene36768:intron 20.0%
!!! GAAATTTTTTGTAACTTCAA+TGG - chr8.2:78981732-78981751 MS.gene36768:CDS 20.0%
!!! GTTTAAAACTTATAGATGAA+AGG - chr8.2:78981093-78981112 MS.gene36768:intron 20.0%
!!! TAACAAGTTTTAAGACTTAT+TGG + chr8.2:78980860-78980879 None:intergenic 20.0%
!!! TCAAATGGATTAAAAAAAAG+TGG - chr8.2:78981704-78981723 MS.gene36768:CDS 20.0%
!!! TCCTTTTAAGTTGTATATAT+TGG - chr8.2:78981574-78981593 MS.gene36768:intron 20.0%
!!! TTCTGTTTTTTTTAAAGGAA+TGG - chr8.2:78981460-78981479 MS.gene36768:intron 20.0%
!!! TTTAATTTTTTGGTGTAAAC+CGG - chr8.2:78978936-78978955 MS.gene36768:intron 20.0%
!!! TTTCAGGTATTTATTAGTTT+GGG - chr8.2:78979932-78979951 MS.gene36768:CDS 20.0%
!!! TTTTCAGGTATTTATTAGTT+TGG - chr8.2:78979931-78979950 MS.gene36768:CDS 20.0%
! AAATCACAATCTTAAAGATG+AGG + chr8.2:78980946-78980965 None:intergenic 25.0%
! AATAAATACCTGAAAAGATC+AGG + chr8.2:78979927-78979946 None:intergenic 25.0%
! AATTTCTACAAGCATATATC+TGG + chr8.2:78981398-78981417 None:intergenic 25.0%
! ACCTTAATATTAAGTGATGA+TGG - chr8.2:78978326-78978345 MS.gene36768:intron 25.0%
! ACTATATCATGGTATGTTAT+TGG - chr8.2:78979053-78979072 MS.gene36768:intron 25.0%
! AGTAGTAATGATGTAATACT+AGG + chr8.2:78978689-78978708 None:intergenic 25.0%
! ATAACTTACAAAAGACTTAC+TGG + chr8.2:78979287-78979306 None:intergenic 25.0%
! CTATATCATGGTATGTTATT+GGG - chr8.2:78979054-78979073 MS.gene36768:intron 25.0%
! CTTATGTTTCTTACACTATA+TGG - chr8.2:78979636-78979655 MS.gene36768:intron 25.0%
! GCATCATTTAATTATTCTGT+TGG - chr8.2:78979820-78979839 MS.gene36768:intron 25.0%
! GCATGCTTATTATTAACTTA+GGG - chr8.2:78981435-78981454 MS.gene36768:intron 25.0%
! GCCAATATATACAACTTAAA+AGG + chr8.2:78981578-78981597 None:intergenic 25.0%
! TCTCATTGTTAAAAATGACA+AGG - chr8.2:78978859-78978878 MS.gene36768:intron 25.0%
! TGTAAATAGATTCACACATA+TGG + chr8.2:78980980-78980999 None:intergenic 25.0%
! TGTTCAACAAACTCTTTAAA+AGG + chr8.2:78980313-78980332 None:intergenic 25.0%
! TTAAAAAAAAACACAAGTGG+TGG + chr8.2:78980466-78980485 None:intergenic 25.0%
! TTGTTAAAATATGACAAACC+TGG + chr8.2:78980156-78980175 None:intergenic 25.0%
! TTTACCATCAATGTAAACAA+TGG + chr8.2:78978297-78978316 None:intergenic 25.0%
! TTTACCTTATGGAAAAATTG+GGG + chr8.2:78981314-78981333 None:intergenic 25.0%
!! AGAAATGTATTTTGCATAGT+TGG + chr8.2:78980365-78980384 None:intergenic 25.0%
!! GAAATGTATTTTGCATAGTT+GGG + chr8.2:78980364-78980383 None:intergenic 25.0%
!! TTACATTGATGGTAAAAGAA+TGG - chr8.2:78978301-78978320 MS.gene36768:CDS 25.0%
!! TTCAGGTATTTATTAGTTTG+GGG - chr8.2:78979933-78979952 MS.gene36768:CDS 25.0%
!!! AATCTTTTGGTTACAAAAGT+TGG - chr8.2:78981052-78981071 MS.gene36768:intron 25.0%
!!! ATATATTGGCTTATGTACTT+TGG - chr8.2:78981588-78981607 MS.gene36768:intron 25.0%
!!! CTTAGACATTTTTTTTCTCA+GGG - chr8.2:78980211-78980230 MS.gene36768:CDS 25.0%
!!! GGGTTTTCTGTTTTTTTTAA+AGG - chr8.2:78981455-78981474 MS.gene36768:intron 25.0%
!!! GTGTTTTAAAATTGATGCAA+GGG - chr8.2:78980906-78980925 MS.gene36768:intron 25.0%
!!! TCATCTATAAGTTTTAAACC+CGG + chr8.2:78981092-78981111 None:intergenic 25.0%
!!! TCTTAGACATTTTTTTTCTC+AGG - chr8.2:78980210-78980229 MS.gene36768:CDS 25.0%
!!! TGTGTTTTAAAATTGATGCA+AGG - chr8.2:78980905-78980924 MS.gene36768:intron 25.0%
!!! TGTTTTAAAATTGATGCAAG+GGG - chr8.2:78980907-78980926 MS.gene36768:intron 25.0%
!!! TTTTTTAAAGGAATGGATCA+TGG - chr8.2:78981467-78981486 MS.gene36768:intron 25.0%
AAAATAGCAGTGTCAAAGAT+TGG + chr8.2:78980510-78980529 None:intergenic 30.0%
AACATACCATGATATAGTAG+CGG + chr8.2:78979051-78979070 None:intergenic 30.0%
AAGACTTATTGGTGTATGAT+GGG + chr8.2:78980849-78980868 None:intergenic 30.0%
ACAACCATTGTTTACATTGA+TGG - chr8.2:78978290-78978309 MS.gene36768:CDS 30.0%
ACTTTCATATGTGCAGATTA+TGG - chr8.2:78979215-78979234 MS.gene36768:CDS 30.0%
AGATGAGAAAAAATTGTTCC+TGG - chr8.2:78979732-78979751 MS.gene36768:intron 30.0%
AGGTATTTGAGTAGTTAGTA+GGG + chr8.2:78980728-78980747 None:intergenic 30.0%
ATAGATTCACACATATGGTA+TGG + chr8.2:78980975-78980994 None:intergenic 30.0%
ATGAAAGTAGTAAGACAAAC+AGG + chr8.2:78979203-78979222 None:intergenic 30.0%
ATGCAACATATACACACAAA+AGG + chr8.2:78981004-78981023 None:intergenic 30.0%
ATGTAAATTGCTAATGTCAG+CGG + chr8.2:78979573-78979592 None:intergenic 30.0%
CAATATGGATATTGCTTCAA+TGG + chr8.2:78979423-78979442 None:intergenic 30.0%
CAATCTTAAAGATGAGGAAA+TGG + chr8.2:78980940-78980959 None:intergenic 30.0%
CAATTTCCGTTCATTTCTTT+GGG - chr8.2:78979479-78979498 MS.gene36768:intron 30.0%
CATTGAAGCAATATCCATAT+TGG - chr8.2:78979421-78979440 MS.gene36768:intron 30.0%
GACAGTCAAAATTAACAACA+GGG + chr8.2:78979336-78979355 None:intergenic 30.0%
GCCATCATCACTTAATATTA+AGG + chr8.2:78978330-78978349 None:intergenic 30.0%
GCTAGTACAAACAAAACTAA+AGG + chr8.2:78978660-78978679 None:intergenic 30.0%
GGCATGCTTATTATTAACTT+AGG - chr8.2:78981434-78981453 MS.gene36768:intron 30.0%
GTGATTCATTTCCTTTCAAA+TGG - chr8.2:78981689-78981708 MS.gene36768:CDS 30.0%
TAAGACTTATTGGTGTATGA+TGG + chr8.2:78980850-78980869 None:intergenic 30.0%
TAGATTCACACATATGGTAT+GGG + chr8.2:78980974-78980993 None:intergenic 30.0%
TAGTTATGTCTAAAAAGGCA+GGG - chr8.2:78981779-78981798 MS.gene36768:intron 30.0%
TCAATTTCCGTTCATTTCTT+TGG - chr8.2:78979478-78979497 MS.gene36768:intron 30.0%
TCATTAGTAGTAATGTCTGA+AGG - chr8.2:78981546-78981565 MS.gene36768:intron 30.0%
TGACAGTCAAAATTAACAAC+AGG + chr8.2:78979337-78979356 None:intergenic 30.0%
TGCAACATATACACACAAAA+GGG + chr8.2:78981003-78981022 None:intergenic 30.0%
TTACAAAAGTTGGATGCTAA+GGG - chr8.2:78981062-78981081 MS.gene36768:intron 30.0%
TTACCTTATGGAAAAATTGG+GGG + chr8.2:78981313-78981332 None:intergenic 30.0%
TTCACAAGTAGAAGAATGTA+TGG + chr8.2:78981350-78981369 None:intergenic 30.0%
TTCTTCTTCTTAAAGCTTGT+TGG - chr8.2:78980531-78980550 MS.gene36768:intron 30.0%
! AACAAACTCTTTAAAAGGCT+GGG + chr8.2:78980308-78980327 None:intergenic 30.0%
! ACACTATATGGTGATGTATA+TGG - chr8.2:78979648-78979667 MS.gene36768:intron 30.0%
! AGTGTATACCTTTGTTTCAT+CGG + chr8.2:78980666-78980685 None:intergenic 30.0%
! CACTATATGGTGATGTATAT+GGG - chr8.2:78979649-78979668 MS.gene36768:intron 30.0%
! CTGATGATACTTGATTTTAC+AGG - chr8.2:78982156-78982175 MS.gene36768:CDS 30.0%
! GTCTTTAACTTTGCTATCTT+TGG + chr8.2:78978587-78978606 None:intergenic 30.0%
! TTTTCAAAACAGGTCATCTT+TGG - chr8.2:78981802-78981821 MS.gene36768:intron 30.0%
! TTTTCCTAGTACTCATGTTA+AGG - chr8.2:78982076-78982095 MS.gene36768:intron 30.0%
!! GATGACAAATAAGGGTATTA+TGG + chr8.2:78980817-78980836 None:intergenic 30.0%
!! TTGTTTAGTTCTTGAAGCTT+TGG - chr8.2:78978883-78978902 MS.gene36768:intron 30.0%
!! TTTGAGTTTGGTTTGTTTGA+AGG - chr8.2:78979175-78979194 MS.gene36768:intron 30.0%
!!! AGGAACAATTTTTTCTCATC+TGG + chr8.2:78979733-78979752 None:intergenic 30.0%
AAATTGTTCCTGGTAGATCT+TGG - chr8.2:78979742-78979761 MS.gene36768:intron 35.0%
AAGGCAACTGATGACAAATA+AGG + chr8.2:78980826-78980845 None:intergenic 35.0%
AATAAGCATGCCTTGAAACT+AGG + chr8.2:78981426-78981445 None:intergenic 35.0%
AATACAAGCAACCATTTCAG+TGG + chr8.2:78979399-78979418 None:intergenic 35.0%
ACAAAGGATATCAAGTTTGC+AGG - chr8.2:78980239-78980258 MS.gene36768:CDS 35.0%
ACGAAACTCAAGAAACACTA+AGG - chr8.2:78982045-78982064 MS.gene36768:intron 35.0%
AGAAAACTTGAGTCAAACCA+AGG + chr8.2:78978803-78978822 None:intergenic 35.0%
AGAAATGAACGGAAATTGAG+TGG + chr8.2:78979477-78979496 None:intergenic 35.0%
AGGCAACTGATGACAAATAA+GGG + chr8.2:78980825-78980844 None:intergenic 35.0%
AGTGACTAAGTTTACTAGTG+AGG + chr8.2:78980748-78980767 None:intergenic 35.0%
AGTGTCTATCCACTATTCAT+AGG + chr8.2:78979510-78979529 None:intergenic 35.0%
ATATATCTGGTGTGCTATAC+AGG + chr8.2:78981385-78981404 None:intergenic 35.0%
ATCTTGAACTCATTCTTCCT+TGG - chr8.2:78978783-78978802 MS.gene36768:CDS 35.0%
ATGATGTAATACTAGGCTAC+TGG + chr8.2:78978682-78978701 None:intergenic 35.0%
ATTGACAAAGGAAATGAGGA+TGG - chr8.2:78981194-78981213 MS.gene36768:intron 35.0%
CATTGTAAACACTAATCCAC+TGG + chr8.2:78980635-78980654 None:intergenic 35.0%
GCATAACCCAAAGAAATGAA+CGG + chr8.2:78979488-78979507 None:intergenic 35.0%
GGGAGTAGTTATGTCTAAAA+AGG - chr8.2:78981774-78981793 MS.gene36768:CDS 35.0%
GTAGTTATGTCTAAAAAGGC+AGG - chr8.2:78981778-78981797 MS.gene36768:intron 35.0%
GTATGATTGCTGCAAATACT+GGG + chr8.2:78981662-78981681 None:intergenic 35.0%
GTGCAGATTATGGATATTCT+AGG - chr8.2:78979225-78979244 MS.gene36768:CDS 35.0%
GTGGCAAAAAAAAATTCCGT+CGG - chr8.2:78979019-78979038 MS.gene36768:CDS 35.0%
GTTACAAAAGTTGGATGCTA+AGG - chr8.2:78981061-78981080 MS.gene36768:intron 35.0%
TACCTTATGGAAAAATTGGG+GGG + chr8.2:78981312-78981331 None:intergenic 35.0%
TAGTAGTAATGTCTGAAGGT+TGG - chr8.2:78981550-78981569 MS.gene36768:intron 35.0%
TCTCTATTTGATGGGATTGT+TGG - chr8.2:78980382-78980401 MS.gene36768:CDS 35.0%
TGATGAACAACCCAAAAAGA+AGG - chr8.2:78980587-78980606 MS.gene36768:CDS 35.0%
TGTATGATTGCTGCAAATAC+TGG + chr8.2:78981663-78981682 None:intergenic 35.0%
TTCCATTCATCATACAAGCT+AGG + chr8.2:78979252-78979271 None:intergenic 35.0%
TTCGGAAAACGTAGATCAAT+GGG + chr8.2:78978746-78978765 None:intergenic 35.0%
TTTACACCGCTACTATATCA+TGG - chr8.2:78979042-78979061 MS.gene36768:intron 35.0%
TTTCGGAAAACGTAGATCAA+TGG + chr8.2:78978747-78978766 None:intergenic 35.0%
! ACAAACTCTTTAAAAGGCTG+GGG + chr8.2:78980307-78980326 None:intergenic 35.0%
! ACTTGATTTTACAGGAGAAG+TGG - chr8.2:78982164-78982183 MS.gene36768:CDS 35.0%
! ATATGGTGATGTATATGGGT+AGG - chr8.2:78979653-78979672 MS.gene36768:intron 35.0%
! ATTTTCTGTACCCTAGTGAA+GGG - chr8.2:78981922-78981941 MS.gene36768:intron 35.0%
! CAACAAACTCTTTAAAAGGC+TGG + chr8.2:78980309-78980328 None:intergenic 35.0%
! CTTGATTTTACAGGAGAAGT+GGG - chr8.2:78982165-78982184 MS.gene36768:CDS 35.0%
! GAGGTATTTGAGTAGTTAGT+AGG + chr8.2:78980729-78980748 None:intergenic 35.0%
! TACATTGCCTCTATTTGCTA+TGG - chr8.2:78982199-78982218 MS.gene36768:CDS 35.0%
! TTTTCTCAGGGAGAAAACAA+AGG - chr8.2:78980223-78980242 MS.gene36768:CDS 35.0%
!! AAGCTTGTTGGTCATAAAAG+AGG - chr8.2:78980543-78980562 MS.gene36768:intron 35.0%
!! TAGTACAACTGGTTTGCATA+AGG - chr8.2:78979887-78979906 MS.gene36768:CDS 35.0%
!! TGGCTTTTTCTGTGCAATTT+CGG - chr8.2:78979840-78979859 MS.gene36768:intron 35.0%
AAATCCATGGCCTAAGTTAG+CGG + chr8.2:78981633-78981652 None:intergenic 40.0%
AACCATTTCAGTGGACATAC+TGG + chr8.2:78979390-78979409 None:intergenic 40.0%
AGACATAACTACTCCCCATT+TGG + chr8.2:78981770-78981789 None:intergenic 40.0%
AGAGTGCATCTTCTCCAATA+TGG + chr8.2:78979438-78979457 None:intergenic 40.0%
AGCAAATAGAGGCAATGTAG+AGG + chr8.2:78982198-78982217 None:intergenic 40.0%
ATTAGGCCACTGAATACAGA+AGG - chr8.2:78980418-78980437 MS.gene36768:CDS 40.0%
ATTATGGCAAACCCAGGATA+TGG + chr8.2:78980801-78980820 None:intergenic 40.0%
ATTTGGGGAGAAATGTAAGC+AGG - chr8.2:78980059-78980078 MS.gene36768:intron 40.0%
CAAAAACAGCATAGGTTCTC+TGG + chr8.2:78980283-78980302 None:intergenic 40.0%
CAAGTTTGCAGGAAGAAGAT+GGG - chr8.2:78980250-78980269 MS.gene36768:CDS 40.0%
CAGTTGCAGGAATTGCAAAT+GGG - chr8.2:78981520-78981539 MS.gene36768:intron 40.0%
CCTAGTACTCATGTTAAGGT+GGG - chr8.2:78982080-78982099 MS.gene36768:intron 40.0%
CTATCACAGCACATTGACAA+AGG - chr8.2:78981182-78981201 MS.gene36768:intron 40.0%
GACATAACTACTCCCCATTT+GGG + chr8.2:78981769-78981788 None:intergenic 40.0%
GCACATTGACAAAGGAAATG+AGG - chr8.2:78981190-78981209 MS.gene36768:intron 40.0%
GGAAGAAGCAATGTTTCGTT+GGG - chr8.2:78978375-78978394 MS.gene36768:intron 40.0%
GGATATGGAGGGTTAATGAA+CGG + chr8.2:78980786-78980805 None:intergenic 40.0%
GGATTTCTACGCATTAAGAG+TGG - chr8.2:78981116-78981135 MS.gene36768:intron 40.0%
TAACTTAGGCCATGGATTTC+AGG - chr8.2:78981634-78981653 MS.gene36768:intron 40.0%
TAAGTTAGCGGAGAGCAAAA+TGG + chr8.2:78981621-78981640 None:intergenic 40.0%
TACTATATCACTGCAGTTGC+AGG - chr8.2:78981507-78981526 MS.gene36768:intron 40.0%
TACTCAGAACAAAAGCAGCT+TGG + chr8.2:78982004-78982023 None:intergenic 40.0%
TATATGGGTAGGTATGTGCA+TGG - chr8.2:78979664-78979683 MS.gene36768:intron 40.0%
TATTCAGTGGCCTAATGTCT+GGG + chr8.2:78980414-78980433 None:intergenic 40.0%
TATTCCAGAAAAGAAGCTGC+AGG - chr8.2:78982022-78982041 MS.gene36768:intron 40.0%
TCAAGTTTGCAGGAAGAAGA+TGG - chr8.2:78980249-78980268 MS.gene36768:CDS 40.0%
TCATTAACCCTCCATATCCT+GGG - chr8.2:78980787-78980806 MS.gene36768:CDS 40.0%
TCCTAGTACTCATGTTAAGG+TGG - chr8.2:78982079-78982098 MS.gene36768:intron 40.0%
TCGGAAAACGTAGATCAATG+GGG + chr8.2:78978745-78978764 None:intergenic 40.0%
TGGAAGAAGCAATGTTTCGT+TGG - chr8.2:78978374-78978393 MS.gene36768:intron 40.0%
TGGCAACTTGCAAAATGTAG+TGG - chr8.2:78978346-78978365 MS.gene36768:intron 40.0%
TGGGTTATGCCTATGAATAG+TGG - chr8.2:78979498-78979517 MS.gene36768:intron 40.0%
TGTCCCTGCATCCATTATTA+AGG + chr8.2:78981261-78981280 None:intergenic 40.0%
TTCATTAACCCTCCATATCC+TGG - chr8.2:78980786-78980805 MS.gene36768:CDS 40.0%
TTCCAGTATGTCCACTGAAA+TGG - chr8.2:78979385-78979404 MS.gene36768:intron 40.0%
TTCCTGGTAGATCTTGGATT+GGG - chr8.2:78979748-78979767 MS.gene36768:intron 40.0%
! AAAGGCAGGGTTTTCAAAAC+AGG - chr8.2:78981792-78981811 MS.gene36768:intron 40.0%
! AAGCCGGAAAATTTTCTGCT+TGG - chr8.2:78979694-78979713 MS.gene36768:intron 40.0%
! ACCAAAAGCCTGATCTTTTC+AGG - chr8.2:78979916-78979935 MS.gene36768:CDS 40.0%
! ACCTGAAAAGATCAGGCTTT+TGG + chr8.2:78979920-78979939 None:intergenic 40.0%
! ATTTTGCTCTCCGCTAACTT+AGG - chr8.2:78981620-78981639 MS.gene36768:intron 40.0%
! CTTATTGGTGTATGATGGGA+AGG + chr8.2:78980845-78980864 None:intergenic 40.0%
! GAATACAGAAGGTGCACAAA+AGG - chr8.2:78980429-78980448 MS.gene36768:CDS 40.0%
! GACCTAGCTTGTATGATGAA+TGG - chr8.2:78979247-78979266 MS.gene36768:CDS 40.0%
! GATTTTCTGTACCCTAGTGA+AGG - chr8.2:78981921-78981940 MS.gene36768:intron 40.0%
! GTTGAGTTGTTCAACAGCAA+CGG - chr8.2:78978412-78978431 MS.gene36768:intron 40.0%
!! ACTTGCAAAATGTAGTGGAC+TGG - chr8.2:78978351-78978370 MS.gene36768:intron 40.0%
!! CATCATCTTCTGAAGCCAAT+CGG + chr8.2:78980569-78980588 None:intergenic 40.0%
!! GGCTTTTTCTGTGCAATTTC+GGG - chr8.2:78979841-78979860 MS.gene36768:intron 40.0%
!! TTAATAATGGATGCAGGGAC+AGG - chr8.2:78981260-78981279 MS.gene36768:CDS 40.0%
AAACAGCATAGGTTCTCTGG+AGG + chr8.2:78980280-78980299 None:intergenic 45.0%
ACCCAAAAAGAAGGTTCGAG+TGG - chr8.2:78980596-78980615 MS.gene36768:CDS 45.0%
ATAGTAGCGGTGTAAACCGA+CGG + chr8.2:78979038-78979057 None:intergenic 45.0%
CAAGTGTGCATGCACATTTG+GGG - chr8.2:78980044-78980063 MS.gene36768:intron 45.0%
CACAGTGATATTGCAAGTCC+AGG + chr8.2:78979002-78979021 None:intergenic 45.0%
CATCCATTATTAAGGCCCAC+AGG + chr8.2:78981253-78981272 None:intergenic 45.0%
CCCAAAAAGAAGGTTCGAGT+GGG - chr8.2:78980597-78980616 MS.gene36768:CDS 45.0%
CCCACCTTAACATGAGTACT+AGG + chr8.2:78982083-78982102 None:intergenic 45.0%
CTAGTGAAGGGATTCACAAG+CGG - chr8.2:78981934-78981953 MS.gene36768:intron 45.0%
CTCGTAGACCGATGAAACAA+AGG - chr8.2:78980655-78980674 MS.gene36768:intron 45.0%
CTGGACTTGCAATATCACTG+TGG - chr8.2:78979000-78979019 MS.gene36768:CDS 45.0%
GCAAATGACATCTGTGAAGC+AGG + chr8.2:78978832-78978851 None:intergenic 45.0%
GCAAGTGTGCATGCACATTT+GGG - chr8.2:78980043-78980062 MS.gene36768:intron 45.0%
GCAGTTGCAGGAATTGCAAA+TGG - chr8.2:78981519-78981538 MS.gene36768:intron 45.0%
GCTAATGTCAGCGGAAGAAT+AGG + chr8.2:78979564-78979583 None:intergenic 45.0%
GCTTGTGAATCCCTTCACTA+GGG + chr8.2:78981935-78981954 None:intergenic 45.0%
GGGCTCTTCATCGTACTTTA+AGG + chr8.2:78980344-78980363 None:intergenic 45.0%
GGGGGAGAATTCGTAAACTT+GGG + chr8.2:78981294-78981313 None:intergenic 45.0%
GGTTCGTCCATAGCAAATAG+AGG + chr8.2:78982209-78982228 None:intergenic 45.0%
GTATTCAGTGGCCTAATGTC+TGG + chr8.2:78980415-78980434 None:intergenic 45.0%
GTTCCTGGTAGATCTTGGAT+TGG - chr8.2:78979747-78979766 MS.gene36768:intron 45.0%
GTTGGATGCTAAGGGTTATC+CGG - chr8.2:78981070-78981089 MS.gene36768:intron 45.0%
TAACTTCAATGGCCACAGCA+GGG - chr8.2:78981743-78981762 MS.gene36768:CDS 45.0%
TACCCAATCCAAGATCTACC+AGG + chr8.2:78979753-78979772 None:intergenic 45.0%
TGCAAGTGTGCATGCACATT+TGG - chr8.2:78980042-78980061 MS.gene36768:intron 45.0%
TGGTCATAAAAGAGGCCGAT+TGG - chr8.2:78980551-78980570 MS.gene36768:intron 45.0%
TGTAAGCAGGAGGGATGATT+TGG - chr8.2:78980072-78980091 MS.gene36768:CDS 45.0%
TGTGCACCTTCTGTATTCAG+TGG + chr8.2:78980427-78980446 None:intergenic 45.0%
TTCTTCGAAGTCGTCTTCCT+TGG - chr8.2:78980122-78980141 MS.gene36768:CDS 45.0%
TTGCAGCAGTCGATGTGATT+CGG + chr8.2:78981974-78981993 None:intergenic 45.0%
TTGGATGCTAAGGGTTATCC+GGG - chr8.2:78981071-78981090 MS.gene36768:intron 45.0%
TTGGTCCAAACCCAGACATT+AGG - chr8.2:78980401-78980420 MS.gene36768:CDS 45.0%
! AAATGGCGGGATAGTACAAC+TGG - chr8.2:78979876-78979895 MS.gene36768:CDS 45.0%
! ACCCACTCGAACCTTCTTTT+TGG + chr8.2:78980601-78980620 None:intergenic 45.0%
! CCCACTCGAACCTTCTTTTT+GGG + chr8.2:78980600-78980619 None:intergenic 45.0%
! CTCCCCCCAATTTTTCCATA+AGG - chr8.2:78981307-78981326 MS.gene36768:intron 45.0%
! GCGCCAAGCAGAAAATTTTC+CGG + chr8.2:78979700-78979719 None:intergenic 45.0%
!! AAGGGTATTATGGCAAACCC+AGG + chr8.2:78980807-78980826 None:intergenic 45.0%
!! AGCAGTGTTGCTTCATCTCA+GGG - chr8.2:78981227-78981246 MS.gene36768:intron 45.0%
!! GGGCCTTAATAATGGATGCA+GGG - chr8.2:78981255-78981274 MS.gene36768:CDS 45.0%
!! TAGCAGTGTTGCTTCATCTC+AGG - chr8.2:78981226-78981245 MS.gene36768:intron 45.0%
!! TGCAAAATGTAGTGGACTGG+TGG - chr8.2:78978354-78978373 MS.gene36768:intron 45.0%
!! TGGGCCTTAATAATGGATGC+AGG - chr8.2:78981254-78981273 MS.gene36768:CDS 45.0%
AGGAATGGATCATGGAGCAG+TGG - chr8.2:78981475-78981494 MS.gene36768:intron 50.0%
AGTGGCCTAATGTCTGGGTT+TGG + chr8.2:78980409-78980428 None:intergenic 50.0%
ATGGCAAACCCAGGATATGG+AGG + chr8.2:78980798-78980817 None:intergenic 50.0%
CAAACCTGGTATCCTTGCCA+AGG + chr8.2:78980142-78980161 None:intergenic 50.0%
CGCTTGTGAATCCCTTCACT+AGG + chr8.2:78981936-78981955 None:intergenic 50.0%
CGTGTACAAGCAGCATCTAC+CGG - chr8.2:78978715-78978734 MS.gene36768:CDS 50.0%
GCTGGGGACAAAAACAGCAT+AGG + chr8.2:78980291-78980310 None:intergenic 50.0%
GCTTGCAGCTACTAAATGGC+GGG - chr8.2:78979863-78979882 MS.gene36768:CDS 50.0%
GGAATGGATCATGGAGCAGT+GGG - chr8.2:78981476-78981495 MS.gene36768:intron 50.0%
GGCTTGCAGCTACTAAATGG+CGG - chr8.2:78979862-78979881 MS.gene36768:CDS 50.0%
GGGGAGAAATGTAAGCAGGA+GGG - chr8.2:78980063-78980082 MS.gene36768:intron 50.0%
GGGGGGAGAATTCGTAAACT+TGG + chr8.2:78981295-78981314 None:intergenic 50.0%
GTAACTTCAATGGCCACAGC+AGG - chr8.2:78981742-78981761 MS.gene36768:CDS 50.0%
GTGCATGCACACTTGCATAG+CGG + chr8.2:78980039-78980058 None:intergenic 50.0%
GTGTACAAGCAGCATCTACC+GGG - chr8.2:78978716-78978735 MS.gene36768:CDS 50.0%
TACTGGGTGCCTGAAATCCA+TGG + chr8.2:78981646-78981665 None:intergenic 50.0%
TCGGGCTTGCAGCTACTAAA+TGG - chr8.2:78979859-78979878 MS.gene36768:CDS 50.0%
TCTTCCTTGGCAAGGATACC+AGG - chr8.2:78980135-78980154 MS.gene36768:CDS 50.0%
TGAAGGGATTCACAAGCGGT+GGG - chr8.2:78981938-78981957 MS.gene36768:intron 50.0%
TGGAGAAGATGCACTCTCGA+GGG - chr8.2:78979441-78979460 MS.gene36768:intron 50.0%
TGGCAAACCCAGGATATGGA+GGG + chr8.2:78980797-78980816 None:intergenic 50.0%
TGGGGAGAAATGTAAGCAGG+AGG - chr8.2:78980062-78980081 MS.gene36768:intron 50.0%
TGTGCATGGAGATGTGAAGC+CGG - chr8.2:78979678-78979697 MS.gene36768:intron 50.0%
TTGGAGAAGATGCACTCTCG+AGG - chr8.2:78979440-78979459 MS.gene36768:intron 50.0%
TTTCTCATCTGGTGTCCCAG+AGG + chr8.2:78979722-78979741 None:intergenic 50.0%
! AATTTTCTGCTTGGCGCCTC+TGG - chr8.2:78979703-78979722 MS.gene36768:intron 50.0%
! ATTTTCTGCTTGGCGCCTCT+GGG - chr8.2:78979704-78979723 MS.gene36768:intron 50.0%
! CACATCGACTGCTGCAACTT+GGG - chr8.2:78981977-78981996 MS.gene36768:intron 50.0%
! TCACATCGACTGCTGCAACT+TGG - chr8.2:78981976-78981995 MS.gene36768:intron 50.0%
! TCGTCCTGCAGCTTCTTTTC+TGG + chr8.2:78982029-78982048 None:intergenic 50.0%
!! ACACTAATCCACTGGTTCGC+TGG + chr8.2:78980627-78980646 None:intergenic 50.0%
ATTCACAAGCGGTGGGAGTC+TGG - chr8.2:78981945-78981964 MS.gene36768:intron 55.0%
CACTCAATTGCGGAGACGAG+GGG - chr8.2:78978972-78978991 MS.gene36768:CDS 55.0%
CGAAGTCGTCTTCCTTGGCA+AGG - chr8.2:78980127-78980146 MS.gene36768:CDS 55.0%
CTCGTCTCCGCAATTGAGTG+CGG + chr8.2:78978972-78978991 None:intergenic 55.0%
CTCTCCGCTAACTTAGGCCA+TGG - chr8.2:78981626-78981645 MS.gene36768:intron 55.0%
GCACTCAATTGCGGAGACGA+GGG - chr8.2:78978971-78978990 MS.gene36768:CDS 55.0%
GGGCCTGTGGGCCTTAATAA+TGG - chr8.2:78981247-78981266 MS.gene36768:CDS 55.0%
GTGAAGGGATTCACAAGCGG+TGG - chr8.2:78981937-78981956 MS.gene36768:intron 55.0%
TACAAGCAGCATCTACCGGG+TGG - chr8.2:78978719-78978738 MS.gene36768:CDS 55.0%
TGCTTCATCTCAGGGCCTGT+GGG - chr8.2:78981235-78981254 MS.gene36768:CDS 55.0%
TGGGTTTACCAGCGAACCAG+TGG - chr8.2:78980616-78980635 MS.gene36768:CDS 55.0%
TTGCTTCATCTCAGGGCCTG+TGG - chr8.2:78981234-78981253 MS.gene36768:intron 55.0%
CGCACTCAATTGCGGAGACG+AGG - chr8.2:78978970-78978989 MS.gene36768:CDS 60.0%
CGTAGATCAATGGGGCCACC+CGG + chr8.2:78978737-78978756 None:intergenic 60.0%
GTCTCCGCAATTGAGTGCGG+CGG + chr8.2:78978969-78978988 None:intergenic 60.0%
TCAATTGCGGAGACGAGGGG+CGG - chr8.2:78978975-78978994 MS.gene36768:CDS 60.0%
TCCTCCGCCGCACTCAATTG+CGG - chr8.2:78978962-78978981 MS.gene36768:CDS 60.0%
TGAGTGCGGCGGAGGATATC+CGG + chr8.2:78978958-78978977 None:intergenic 60.0%
GCCACAGCAGGGCCCAAATG+GGG - chr8.2:78981754-78981773 MS.gene36768:CDS 65.0%
GGCCACAGCAGGGCCCAAAT+GGG - chr8.2:78981753-78981772 MS.gene36768:CDS 65.0%
TCCCCATTTGGGCCCTGCTG+TGG + chr8.2:78981758-78981777 None:intergenic 65.0%
TCCGCAATTGAGTGCGGCGG+AGG + chr8.2:78978966-78978985 None:intergenic 65.0%
TGGCCACAGCAGGGCCCAAA+TGG - chr8.2:78981752-78981771 MS.gene36768:CDS 65.0%
! GCGGAGACGAGGGGCGGACC+TGG - chr8.2:78978981-78979000 MS.gene36768:CDS 80.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 78978284 78982237 78978284 ID=MS.gene36768
chr8.2 mRNA 78978284 78982237 78978284 ID=MS.gene36768.t1;Parent=MS.gene36768
chr8.2 exon 78982088 78982237 78982088 ID=MS.gene36768.t1.exon1;Parent=MS.gene36768.t1
chr8.2 CDS 78982088 78982237 78982088 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78981641 78981793 78981641 ID=MS.gene36768.t1.exon2;Parent=MS.gene36768.t1
chr8.2 CDS 78981641 78981793 78981641 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78981235 78981290 78981235 ID=MS.gene36768.t1.exon3;Parent=MS.gene36768.t1
chr8.2 CDS 78981235 78981290 78981235 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78980752 78980846 78980752 ID=MS.gene36768.t1.exon4;Parent=MS.gene36768.t1
chr8.2 CDS 78980752 78980846 78980752 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78980584 78980650 78980584 ID=MS.gene36768.t1.exon5;Parent=MS.gene36768.t1
chr8.2 CDS 78980584 78980650 78980584 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78980365 78980494 78980365 ID=MS.gene36768.t1.exon6;Parent=MS.gene36768.t1
chr8.2 CDS 78980365 78980494 78980365 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78980071 78980289 78980071 ID=MS.gene36768.t1.exon7;Parent=MS.gene36768.t1
chr8.2 CDS 78980071 78980289 78980071 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78979845 78979975 78979845 ID=MS.gene36768.t1.exon8;Parent=MS.gene36768.t1
chr8.2 CDS 78979845 78979975 78979845 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78979193 78979367 78979193 ID=MS.gene36768.t1.exon9;Parent=MS.gene36768.t1
chr8.2 CDS 78979193 78979367 78979193 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78978954 78979044 78978954 ID=MS.gene36768.t1.exon10;Parent=MS.gene36768.t1
chr8.2 CDS 78978954 78979044 78978954 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78978708 78978865 78978708 ID=MS.gene36768.t1.exon11;Parent=MS.gene36768.t1
chr8.2 CDS 78978708 78978865 78978708 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78978424 78978612 78978424 ID=MS.gene36768.t1.exon12;Parent=MS.gene36768.t1
chr8.2 CDS 78978424 78978612 78978424 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
chr8.2 exon 78978284 78978343 78978284 ID=MS.gene36768.t1.exon13;Parent=MS.gene36768.t1
chr8.2 CDS 78978284 78978343 78978284 ID=cds.MS.gene36768.t1;Parent=MS.gene36768.t1
Gene Sequence

>MS.gene36768

ATGTTGACAACCATTGTTTACATTGATGGTAAAAGAATGGTAACCTTAATATTAAGTGATGATGGCAACTTGCAAAATGTAGTGGACTGGTGGAAGAAGCAATGTTTCGTTGGGATTAAACATTTAGTGTTGAGTTGTTCAACAGCAACGGTATAATTTTTTGAAAGTTTTTTTTATTGATATTTATTATCATAGTTTATATTGTTAATGATTGATGTATTTCACTAATCAAATACACGTATACAAGTATTCAAATCCAATTCTTCAACTAAATATTCTCAATATCAGAGTAACAAGTATCCAAAGATAGCAAAGTTAAAGACTTGATTGAATATAAAAAGAAACATAGGAAATTATGGTATAATATCTTCATCCTTTAGTTTTGTTTGTACTAGCCAGTAGCCTAGTATTACATCATTACTACTTGTCGTCGTGTACAAGCAGCATCTACCGGGTGGCCCCATTGATCTACGTTTTCCGAAATTTCAACATTTACTTCATCTTGAACTCATTCTTCCTTGGTTTGACTCAAGTTTTCTACTGAGCCTGCTTCACAGATGTCATTTGCTTCAAGTTCTCATTGTTAAAAATGACAAGGTTTGTTTAGTTCTTGAAGCTTTGGTTTATTTAACCTTTTTTCTAAGGAAGTTTATTTAATTTTTTGGTGTAAACCGGATATCCTCCGCCGCACTCAATTGCGGAGACGAGGGGCGGACCTGGACTTGCAATATCACTGTGGCAAAAAAAAATTCCGTCGGTTTACACCGCTACTATATCATGGTATGTTATTGGGTTTTATTTTTTAATCATTTGGGTTTGATTGTTTTTTAATTATTAATTAGTTTGAATGATAATGTAACATTTCTTTTATTTGATGTAACATTTCTTTTATTTGAGTTTGGTTTGTTTGAAGGTTCCTGTTTGTCTTACTACTTTCATATGTGCAGATTATGGATATTCTAGGACCTAGCTTGTATGATGAATGGAATAATAAATCTCACCAGTAAGTCTTTTGTAAGTTATTTGTTAGATGTGCATTAAAGTATATTCCCTGTTGTTAATTTTGACTGTCAATTGTTATGTTAATGTTTCTTTTATCAATTCCAGTATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTAATTTGTTACCACTCAATTTCCGTTCATTTCTTTGGGTTATGCCTATGAATAGTGGATAGACACTTTTTGCAAAGCTAGACATTTTCTCTCATTTTCCTATTCTTCCGCTGACATTAGCAATTTACATAAGAATATGTGAATTAAGTTATTTTATAATAAAAATAATTGGACTTATGTTTCTTACACTATATGGTGATGTATATGGGTAGGTATGTGCATGGAGATGTGAAGCCGGAAAATTTTCTGCTTGGCGCCTCTGGGACACCAGATGAGAAAAAATTGTTCCTGGTAGATCTTGGATTGGGTATGTTTTTGATTGATTATTTATTGGTCACATGTAATATTTTCATTTTTGCATCATTTAATTATTCTGTTGGCTTTTTCTGTGCAATTTCGGGCTTGCAGCTACTAAATGGCGGGATAGTACAACTGGTTTGCATAAGGACTATGACCAAAAGCCTGATCTTTTCAGGTATTTATTAGTTTGGGGTTGTGTAGAAAATGTTTAAATATCTGTTCTCCATATTATATTAACTCGTATCATATGAAAAATATTTTCAGGGGCACAGTCCGCTATGCAAGTGTGCATGCACATTTGGGGAGAAATGTAAGCAGGAGGGATGATTTGGAATCTCTTGCATATACACTGATTTTTCTTCTTCGAAGTCGTCTTCCTTGGCAAGGATACCAGGTTTGTCATATTTTAACAACTTTTAGTTTTTACTCTCATATTAAGAATGTCGTTCTTAGACATTTTTTTTCTCAGGGAGAAAACAAAGGATATCAAGTTTGCAGGAAGAAGATGGGAACACCTCCAGAGAACCTATGCTGTTTTTGTCCCCAGCCTTTTAAAGAGTTTGTTGAACATGTAGTGACCTTAAAGTACGATGAAGAGCCCAACTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGTCCAAACCCAGACATTAGGCCACTGAATACAGAAGGTGCACAAAAGGTATCGATTTTGCCACCACTTGTGTTTTTTTTTAATGTATATACGAAGTTTGTTTTCCAATCTTTGACACTGCTATTTTTTTCTTCTTCTTAAAGCTTGTTGGTCATAAAAGAGGCCGATTGGCTTCAGAAGATGATGATGAACAACCCAAAAAGAAGGTTCGAGTGGGTTTACCAGCGAACCAGTGGATTAGTGTTTACAATGCTCGTAGACCGATGAAACAAAGGTATACACTAATGAAGTATTCTTATAAAATATTCTGACTGCTAAGACACCCTACTAACTACTCAAATACCTCACTAGTAAACTTAGTCACTAGTCTTCTTAGCTTTCCGTTCATTAACCCTCCATATCCTGGGTTTGCCATAATACCCTTATTTGTCATCAGTTGCCTTCCCATCATACACCAATAAGTCTTAAAACTTGTTATATCACATGTGTGATTCTATGCTTATGTGTTTTAAAATTGATGCAAGGGGATGACTTCCATTTCCTCATCTTTAAGATTGTGATTTTTCAACCCATACCATATGTGTGAATCTATTTACACCCTTTTGTGTGTATATGTTGCATCATATGTTTGAATTTCGTTACATTTTTTAATCTTTTGGTTACAAAAGTTGGATGCTAAGGGTTATCCGGGTTTAAAACTTATAGATGAAAGGGGATTTCTACGCATTAAGAGTGGTTTTCTGTGTTGTAGATATCACTACAATGTGTCAAGTACAAGACTATCACAGCACATTGACAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTTGCTTCATCTCAGGGCCTGTGGGCCTTAATAATGGATGCAGGGACAGGTTTCACTTCCCAAGTTTACGAATTCTCCCCCCAATTTTTCCATAAGGTAAATTTAAATCTATTGCCATACATTCTTCTACTTGTGAATTATTAAAATTTCCTGTATAGCACACCAGATATATGCTTGTAGAAATTTTAATCCTAGTTTCAAGGCATGCTTATTATTAACTTAGGGTTTTCTGTTTTTTTTAAAGGAATGGATCATGGAGCAGTGGGAAAAAAAATACTATATCACTGCAGTTGCAGGAATTGCAAATGGGAGTTCATTAGTAGTAATGTCTGAAGGTTGGTTCCTTTTAAGTTGTATATATTGGCTTATGTACTTTGGTAATTCTCCATTTTGCTCTCCGCTAACTTAGGCCATGGATTTCAGGCACCCAGTATTTGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTCAAATGGATTAAAAAAAAGTGGGATGAGAAATTTTTTGTAACTTCAATGGCCACAGCAGGGCCCAAATGGGGAGTAGTTATGTCTAAAAAGGCAGGGTTTTCAAAACAGGTCATCTTTGGATTGAACTTTTATCTGTCAGTACTTTAGTCATAATGCAACTTAATAGTGTGAATAAATACTTACTTTATGTTTATGTATAATAGGCGGTCGAATTAGATTTTCTGTACCCTAGTGAAGGGATTCACAAGCGGTGGGAGTCTGGTTACCGAATCACATCGACTGCTGCAACTTGGGACCAAGCTGCTTTTGTTCTGAGTATTCCAGAAAAGAAGCTGCAGGACGAAACTCAAGAAACACTAAGGACTACTACTTTTCCTAGTACTCATGTTAAGGTGGGTCATATATATTCACATTTGTTGTCTATGCACATGATTTTCAGTTAATTGCAGTCTGATGATACTTGATTTTACAGGAGAAGTGGGCTAAGAACCTCTACATTGCCTCTATTTGCTATGGACGAACCGTTTCTTGA
Protein sequence

>MS.gene36768.t1

MLTTIVYIDGKRMVTLILSDDGNLQNVVDWWKKQCFVGIKHLVLSCSTATHLPGGPIDLRFPKFQHLLHLELILPWFDSSFLLSLLHRCHLLQVLIVKNDKIMDILGPSLYDEWNNKSHQYVHGDVKPENFLLGASGTPDEKKLFLVDLGLATKWRDSTTGLHKDYDQKPDLFRGTVRYASVHAHLGRNVSRRDDLESLAYTLIFLLRSRLPWQGYQGENKGYQVCRKKMGTPPENLCCFCPQPFKEFVEHVVTLKYDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLVGHKRGRLASEDDDEQPKKKVRVGLPANQWISVYNARRPMKQRYHYNVSSTRLSQHIDKGNEDGLYISSVASSQGLWALIMDAGTGFTSQVYEFSPQFFHKEWIMEQWEKKYYITAVAGIANGSSLVVMSEGTQYLQQSYKVSDSFPFKWIKKKWDEKFFVTSMATAGPKWGVVMSKKAGFSKQAVELDFLYPSEGIHKRWESGYRITSTAATWDQAAFVLSIPEKKLQDETQETLRTTTFPSTHVKEKWAKNLYIASICYGRTVS