Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36873.t1 | XP_024632961.1 | 80.9 | 713 | 85 | 4 | 1 | 662 | 81 | 793 | 0.00E+00 | 1149.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36873.t1 | Q9SWG3 | 26.3 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 3.1e-50 | 201.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36873.t1 | D3YBB9 | 73.1 | 709 | 132 | 5 | 2 | 661 | 114 | 812 | 6.1e-294 | 1019.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene36873.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36873.t1 | MTR_0337s0060 | 58.544 | 316 | 31 | 4 | 344 | 656 | 21 | 239 | 1.02e-108 | 328 |
| MS.gene36873.t1 | MTR_0558s0020 | 67.532 | 231 | 36 | 1 | 1 | 192 | 66 | 296 | 5.11e-105 | 321 |
| MS.gene36873.t1 | MTR_6g090505 | 63.713 | 237 | 47 | 1 | 1 | 198 | 1 | 237 | 5.00e-96 | 300 |
| MS.gene36873.t1 | MTR_6g090505 | 75.510 | 49 | 12 | 0 | 464 | 512 | 314 | 362 | 8.50e-11 | 64.7 |
| MS.gene36873.t1 | MTR_1g083640 | 67.157 | 204 | 28 | 3 | 1 | 165 | 81 | 284 | 2.11e-88 | 278 |
| MS.gene36873.t1 | MTR_8g446020 | 59.211 | 228 | 54 | 1 | 4 | 192 | 29 | 256 | 1.65e-85 | 269 |
| MS.gene36873.t1 | MTR_3g028680 | 80.795 | 151 | 26 | 1 | 515 | 662 | 1 | 151 | 1.51e-80 | 253 |
| MS.gene36873.t1 | MTR_2g067090 | 77.703 | 148 | 30 | 1 | 518 | 662 | 99 | 246 | 1.51e-71 | 234 |
| MS.gene36873.t1 | MTR_4g133495 | 60.714 | 196 | 49 | 4 | 473 | 665 | 88 | 258 | 1.24e-66 | 220 |
| MS.gene36873.t1 | MTR_4g133340 | 60.714 | 196 | 49 | 4 | 473 | 665 | 88 | 258 | 1.24e-66 | 220 |
| MS.gene36873.t1 | MTR_0337s0040 | 53.125 | 192 | 51 | 1 | 4 | 156 | 30 | 221 | 4.94e-59 | 198 |
| MS.gene36873.t1 | MTR_2g014100 | 57.558 | 172 | 34 | 1 | 1 | 133 | 74 | 245 | 8.67e-58 | 196 |
| MS.gene36873.t1 | MTR_5g071590 | 81.553 | 103 | 19 | 0 | 1 | 103 | 78 | 180 | 1.40e-57 | 193 |
| MS.gene36873.t1 | MTR_3g008240 | 80.000 | 110 | 22 | 0 | 1 | 110 | 66 | 175 | 1.07e-56 | 191 |
| MS.gene36873.t1 | MTR_4g040430 | 79.091 | 110 | 19 | 1 | 1 | 110 | 65 | 170 | 8.33e-55 | 186 |
| MS.gene36873.t1 | MTR_1g055240 | 82.278 | 79 | 14 | 0 | 27 | 105 | 3 | 81 | 9.52e-42 | 149 |
| MS.gene36873.t1 | MTR_0019s0290 | 73.864 | 88 | 23 | 0 | 18 | 105 | 9 | 96 | 1.10e-40 | 146 |
| MS.gene36873.t1 | MTR_1281s0010 | 82.540 | 63 | 11 | 0 | 1 | 63 | 47 | 109 | 1.03e-29 | 114 |
| MS.gene36873.t1 | MTR_6g051425 | 28.205 | 273 | 129 | 7 | 21 | 238 | 64 | 324 | 2.18e-20 | 93.6 |
| MS.gene36873.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 592 | 662 | 46 | 116 | 1.16e-18 | 84.0 |
| MS.gene36873.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 156 | 191 | 14 | 49 | 1.13e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36873.t1 | AT4G38180 | 26.701 | 588 | 318 | 14 | 20 | 562 | 118 | 637 | 5.84e-57 | 207 |
| MS.gene36873.t1 | AT4G15090 | 26.336 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 1.72e-56 | 206 |
| MS.gene36873.t1 | AT4G15090 | 26.336 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 1.72e-56 | 206 |
| MS.gene36873.t1 | AT4G15090 | 26.336 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 1.72e-56 | 206 |
| MS.gene36873.t1 | AT4G15090 | 26.336 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 1.72e-56 | 206 |
| MS.gene36873.t1 | AT4G15090 | 26.336 | 524 | 320 | 9 | 118 | 638 | 218 | 678 | 1.72e-56 | 206 |
| MS.gene36873.t1 | AT2G27110 | 26.962 | 497 | 306 | 11 | 122 | 616 | 48 | 489 | 9.26e-51 | 188 |
| MS.gene36873.t1 | AT2G27110 | 26.962 | 497 | 306 | 11 | 122 | 616 | 193 | 634 | 3.38e-50 | 188 |
| MS.gene36873.t1 | AT2G27110 | 26.962 | 497 | 306 | 11 | 122 | 616 | 193 | 634 | 3.38e-50 | 188 |
| MS.gene36873.t1 | AT3G06250 | 26.790 | 433 | 258 | 9 | 128 | 558 | 328 | 703 | 1.14e-45 | 174 |
| MS.gene36873.t1 | AT3G06250 | 26.790 | 433 | 258 | 9 | 128 | 558 | 328 | 703 | 1.14e-45 | 174 |
| MS.gene36873.t1 | AT3G06250 | 26.790 | 433 | 258 | 9 | 128 | 558 | 328 | 703 | 1.14e-45 | 174 |
| MS.gene36873.t1 | AT3G22170 | 23.440 | 529 | 333 | 9 | 124 | 650 | 233 | 691 | 3.59e-45 | 173 |
| MS.gene36873.t1 | AT3G22170 | 23.440 | 529 | 333 | 9 | 124 | 650 | 233 | 691 | 3.59e-45 | 173 |
| MS.gene36873.t1 | AT4G38170 | 24.740 | 481 | 294 | 13 | 132 | 600 | 24 | 448 | 1.87e-44 | 167 |
| MS.gene36873.t1 | AT1G76320 | 26.559 | 497 | 301 | 13 | 124 | 616 | 161 | 597 | 1.87e-43 | 166 |
| MS.gene36873.t1 | AT1G76320 | 24.608 | 638 | 360 | 19 | 19 | 616 | 41 | 597 | 2.65e-43 | 167 |
| MS.gene36873.t1 | AT1G76320 | 24.608 | 638 | 360 | 19 | 19 | 616 | 41 | 597 | 2.87e-43 | 167 |
| MS.gene36873.t1 | AT1G76320 | 24.608 | 638 | 360 | 19 | 19 | 616 | 41 | 597 | 2.87e-43 | 167 |
| MS.gene36873.t1 | AT5G18960 | 27.294 | 436 | 253 | 11 | 128 | 558 | 351 | 727 | 5.77e-41 | 160 |
| MS.gene36873.t1 | AT5G18960 | 27.294 | 436 | 253 | 11 | 128 | 558 | 351 | 727 | 5.77e-41 | 160 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 2.17e-38 | 152 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 27 | 581 | 3.46e-38 | 152 |
| MS.gene36873.t1 | AT2G32250 | 23.594 | 640 | 400 | 14 | 5 | 640 | 27 | 581 | 3.52e-38 | 152 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 3.87e-38 | 152 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 3.87e-38 | 152 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 4.46e-38 | 151 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 4.46e-38 | 151 |
| MS.gene36873.t1 | AT2G32250 | 23.713 | 641 | 398 | 15 | 5 | 640 | 68 | 622 | 4.46e-38 | 151 |
| MS.gene36873.t1 | AT1G10240 | 27.187 | 423 | 240 | 11 | 141 | 556 | 243 | 604 | 5.30e-33 | 135 |
| MS.gene36873.t1 | AT1G10240 | 27.187 | 423 | 240 | 11 | 141 | 556 | 243 | 604 | 5.30e-33 | 135 |
| MS.gene36873.t1 | AT1G80010 | 24.494 | 445 | 274 | 12 | 124 | 559 | 270 | 661 | 2.20e-32 | 134 |
| MS.gene36873.t1 | AT5G28530 | 24.131 | 518 | 322 | 12 | 46 | 557 | 167 | 619 | 1.90e-31 | 130 |
| MS.gene36873.t1 | AT5G28530 | 23.938 | 518 | 319 | 13 | 46 | 557 | 167 | 615 | 1.25e-30 | 128 |
| MS.gene36873.t1 | AT5G28530 | 23.938 | 518 | 319 | 13 | 46 | 557 | 167 | 615 | 1.25e-30 | 128 |
| MS.gene36873.t1 | AT1G52520 | 23.112 | 437 | 291 | 9 | 124 | 559 | 246 | 638 | 5.82e-30 | 126 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 171 | 426 | 3.64e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 495 | 615 | 2.24e-12 | 70.9 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 114 | 369 | 3.92e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 438 | 558 | 1.87e-12 | 70.9 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 185 | 440 | 4.14e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 509 | 629 | 2.11e-12 | 70.9 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 171 | 426 | 4.63e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 495 | 615 | 2.17e-12 | 70.9 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 171 | 426 | 4.63e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 495 | 615 | 2.17e-12 | 70.9 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 171 | 426 | 4.71e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 495 | 615 | 1.94e-12 | 71.2 |
| MS.gene36873.t1 | AT4G19990 | 29.615 | 260 | 176 | 4 | 124 | 380 | 171 | 426 | 4.71e-27 | 117 |
| MS.gene36873.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 488 | 618 | 495 | 615 | 1.94e-12 | 71.2 |
| MS.gene36873.t1 | AT5G28530 | 21.853 | 572 | 329 | 19 | 5 | 557 | 84 | 556 | 5.64e-18 | 88.6 |
| MS.gene36873.t1 | AT5G28530 | 21.678 | 572 | 326 | 20 | 5 | 557 | 84 | 552 | 3.53e-17 | 85.9 |
Find 103 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 8.4:+64044247 | MS.gene36873:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.4:+64043938 | MS.gene36873:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.4:-64045073 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.4:+64044205 | MS.gene36873:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.4:+64043154 | MS.gene36873:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 8.4:+64043657 | MS.gene36873:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.4:+64043690 | MS.gene36873:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.4:-64043784 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.4:-64045067 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.4:+64043979 | MS.gene36873:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.4:+64044919 | MS.gene36873:CDS |
| ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8.4:-64043802 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.4:-64043204 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8.4:+64044502 | MS.gene36873:CDS |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 8.4:+64044079 | MS.gene36873:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.4:+64044911 | MS.gene36873:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.4:+64043211 | MS.gene36873:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.4:+64043203 | MS.gene36873:CDS |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 8.4:+64044078 | MS.gene36873:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 8.4:-64044795 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.4:-64042706 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.4:+64045059 | MS.gene36873:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.4:-64045049 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8.4:+64044379 | MS.gene36873:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.4:+64044944 | MS.gene36873:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.4:+64044627 | MS.gene36873:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.4:-64044550 | None:intergenic |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.4:-64044551 | None:intergenic |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.4:+64042765 | MS.gene36873:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.4:-64043795 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.4:+64042748 | MS.gene36873:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.4:-64044728 | None:intergenic |
| CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 8.4:+64042631 | MS.gene36873:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.4:+64043869 | MS.gene36873:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8.4:+64044033 | MS.gene36873:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.4:+64044628 | MS.gene36873:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.4:+64042597 | MS.gene36873:CDS |
| GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 8.4:+64044585 | MS.gene36873:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8.4:-64044381 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.4:-64042742 | None:intergenic |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 8.4:-64042853 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.4:+64042591 | MS.gene36873:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.4:+64044395 | MS.gene36873:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.4:-64043670 | None:intergenic |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.4:+64043980 | MS.gene36873:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.4:+64044219 | MS.gene36873:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.4:-64044299 | None:intergenic |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.4:-64043099 | None:intergenic |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 8.4:-64042841 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.4:+64044066 | MS.gene36873:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.4:+64044564 | MS.gene36873:CDS |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 8.4:+64044238 | MS.gene36873:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 8.4:+64044084 | MS.gene36873:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 8.4:+64042801 | MS.gene36873:CDS |
| TTTCGATTGGCATGTGGAGA+TGG | 0.516566 | 8.4:+64043000 | MS.gene36873:CDS |
| CCGTCTGTGAACCATCTGTT+GGG | 0.517941 | 8.4:+64045020 | MS.gene36873:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.4:-64044544 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.4:-64044187 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 8.4:+64042642 | MS.gene36873:CDS |
| TCTCCACATGCCAATCGAAA+AGG | 0.525554 | 8.4:-64042997 | None:intergenic |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.4:+64044565 | MS.gene36873:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8.4:-64044376 | None:intergenic |
| AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 8.4:+64044584 | MS.gene36873:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.4:-64044182 | None:intergenic |
| TGGCATGTGGAGATGGTGGC+TGG | 0.541090 | 8.4:+64043007 | MS.gene36873:CDS |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.4:+64044396 | MS.gene36873:CDS |
| GCCGTCTGTGAACCATCTGT+TGG | 0.544685 | 8.4:+64045019 | MS.gene36873:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.4:+64042643 | MS.gene36873:CDS |
| ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8.4:-64043815 | None:intergenic |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 8.4:+64044785 | MS.gene36873:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.4:+64043061 | MS.gene36873:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8.4:+64042961 | MS.gene36873:intron |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.4:+64044871 | MS.gene36873:CDS |
| CGATTGGCATGTGGAGATGG+TGG | 0.571935 | 8.4:+64043003 | MS.gene36873:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 8.4:+64042800 | MS.gene36873:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.4:-64044300 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8.4:-64045031 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.4:-64044321 | None:intergenic |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.4:+64044912 | MS.gene36873:CDS |
| ACCATATACACAGACCAGGC+TGG | 0.590176 | 8.4:+64043801 | MS.gene36873:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.4:+64044907 | MS.gene36873:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 8.4:+64044534 | MS.gene36873:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.4:-64044987 | None:intergenic |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.4:+64044874 | MS.gene36873:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.4:+64044297 | MS.gene36873:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8.4:+64044382 | MS.gene36873:CDS |
| TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 8.4:-64044819 | None:intergenic |
| CCCAACAGATGGTTCACAGA+CGG | 0.617229 | 8.4:-64045020 | None:intergenic |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.4:-64042691 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8.4:-64044035 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8.4:+64042966 | MS.gene36873:intron |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.4:-64044549 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.4:+64043870 | MS.gene36873:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 8.4:-64044792 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.4:+64044220 | MS.gene36873:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.4:-64044770 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.4:-64044341 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.4:+64044896 | MS.gene36873:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.4:-64044646 | None:intergenic |
| TCAAACCATATACACAGACC+AGG | 0.671057 | 8.4:+64043797 | MS.gene36873:CDS |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.4:+64044629 | MS.gene36873:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.4:+64044480 | MS.gene36873:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.4:+64044481 | MS.gene36873:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACCATAATTATAGTTTAA+TGG | - | chr8.4:64045446-64045465 | None:intergenic | 15.0% |
| !! | AAACCATTAAACTATAATTA+TGG | + | chr8.4:64045440-64045459 | MS.gene36873:intron | 15.0% |
| !!! | ACGCATTTATTATTATATTT+TGG | + | chr8.4:64045370-64045389 | MS.gene36873:intron | 15.0% |
| !!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr8.4:64045199-64045218 | MS.gene36873:intron | 15.0% |
| !! | ATGTCTATAAGATATATAAG+TGG | + | chr8.4:64042800-64042819 | MS.gene36873:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | + | chr8.4:64042591-64042610 | MS.gene36873:CDS | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | + | chr8.4:64042801-64042820 | MS.gene36873:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr8.4:64043386-64043405 | MS.gene36873:intron | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr8.4:64044008-64044027 | MS.gene36873:CDS | 20.0% |
| !!! | CTATACATTTTCACATTTTT+TGG | + | chr8.4:64045342-64045361 | MS.gene36873:intron | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr8.4:64043358-64043377 | MS.gene36873:intron | 20.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | - | chr8.4:64043846-64043865 | None:intergenic | 25.0% |
| ! | AAACCAAATTAACAGTCTAA+TGG | - | chr8.4:64045403-64045422 | None:intergenic | 25.0% |
| ! | AAACCATTAGACTGTTAATT+TGG | + | chr8.4:64045397-64045416 | MS.gene36873:intron | 25.0% |
| ! | AATTCTTGATTGTTATGCAT+TGG | + | chr8.4:64045297-64045316 | MS.gene36873:intron | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | + | chr8.4:64042597-64042616 | MS.gene36873:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr8.4:64043203-64043222 | MS.gene36873:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr8.4:64043229-64043248 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr8.4:64044379-64044398 | None:intergenic | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr8.4:64044205-64044224 | MS.gene36873:CDS | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr8.4:64043276-64043295 | MS.gene36873:intron | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8.4:64044344-64044363 | None:intergenic | 25.0% |
| ! | TGATGCTTTAACTAAAAAAG+CGG | + | chr8.4:64045230-64045249 | MS.gene36873:intron | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr8.4:64044379-64044398 | MS.gene36873:CDS | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr8.4:64043938-64043957 | MS.gene36873:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8.4:64043378-64043397 | MS.gene36873:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8.4:64043634-64043653 | MS.gene36873:intron | 25.0% |
| !! | TTGGTTTGAATATTATCTTC+TGG | + | chr8.4:64045316-64045335 | MS.gene36873:intron | 25.0% |
| !! | TTTTCAATTACTGAGTTAAG+TGG | + | chr8.4:64045474-64045493 | MS.gene36873:intron | 25.0% |
| !!! | ATGTTCTGGTTTAAAATTGA+AGG | + | chr8.4:64043290-64043309 | MS.gene36873:intron | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr8.4:64044480-64044499 | MS.gene36873:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8.4:64042587-64042606 | None:intergenic | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr8.4:64043385-64043404 | MS.gene36873:intron | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8.4:64042913-64042932 | MS.gene36873:intron | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr8.4:64044012-64044031 | MS.gene36873:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr8.4:64044481-64044500 | MS.gene36873:CDS | 25.0% |
| AAACACATATGATCTTTCCA+TGG | - | chr8.4:64043449-64043468 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr8.4:64042643-64042662 | MS.gene36873:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr8.4:64043211-64043230 | MS.gene36873:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | + | chr8.4:64045059-64045078 | MS.gene36873:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | + | chr8.4:64043979-64043998 | MS.gene36873:CDS | 30.0% | |
| AGAACATCTTATGAAGTGAT+GGG | + | chr8.4:64042946-64042965 | MS.gene36873:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | + | chr8.4:64043980-64043999 | MS.gene36873:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr8.4:64043673-64043692 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | - | chr8.4:64044552-64044571 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr8.4:64043154-64043173 | MS.gene36873:CDS | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | + | chr8.4:64042631-64042650 | MS.gene36873:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr8.4:64044384-64044403 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | + | chr8.4:64043315-64043334 | MS.gene36873:intron | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr8.4:64044382-64044401 | MS.gene36873:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr8.4:64043894-64043913 | MS.gene36873:CDS | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr8.4:64044553-64044572 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr8.4:64043207-64043226 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr8.4:64042732-64042751 | MS.gene36873:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr8.4:64044190-64044209 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr8.4:64042642-64042661 | MS.gene36873:CDS | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | - | chr8.4:64043082-64043101 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr8.4:64044324-64044343 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | - | chr8.4:64045070-64045089 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr8.4:64043593-64043612 | MS.gene36873:intron | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr8.4:64042844-64042863 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr8.4:64042765-64042784 | MS.gene36873:CDS | 30.0% |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr8.4:64044439-64044458 | MS.gene36873:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr8.4:64044896-64044915 | MS.gene36873:CDS | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8.4:64043787-64043806 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | + | chr8.4:64043837-64043856 | MS.gene36873:CDS | 30.0% |
| ! | TCAGTTTTCAATTCAATGAG+TGG | - | chr8.4:64045618-64045637 | None:intergenic | 30.0% |
| ! | TGAGGCTTTAACAAATTAAG+CGG | + | chr8.4:64045168-64045187 | MS.gene36873:intron | 30.0% |
| ! | TGGTTTAAAATTGAAGGTTC+TGG | + | chr8.4:64043296-64043315 | MS.gene36873:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8.4:64045052-64045071 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | + | chr8.4:64044664-64044683 | MS.gene36873:CDS | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr8.4:64044564-64044583 | MS.gene36873:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr8.4:64044944-64044963 | MS.gene36873:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr8.4:64044565-64044584 | MS.gene36873:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | + | chr8.4:64044661-64044680 | MS.gene36873:CDS | 30.0% |
| !!! | AAGACATAGCCAGTATTTTT+TGG | + | chr8.4:64043116-64043135 | MS.gene36873:CDS | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | + | chr8.4:64043117-64043136 | MS.gene36873:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8.4:64044729-64044748 | MS.gene36873:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8.4:64043849-64043868 | MS.gene36873:CDS | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | + | chr8.4:64044219-64044238 | MS.gene36873:CDS | 35.0% | |
| CATAAATTCCAAGGCAAGAT+AGG | - | chr8.4:64043416-64043435 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr8.4:64044220-64044239 | MS.gene36873:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr8.4:64042883-64042902 | MS.gene36873:intron | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | - | chr8.4:64044554-64044573 | None:intergenic | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr8.4:64042731-64042750 | MS.gene36873:CDS | 35.0% | |
| CTCATTCAAATCGTATGCAT+TGG | + | chr8.4:64044066-64044085 | MS.gene36873:CDS | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr8.4:64042726-64042745 | MS.gene36873:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | + | chr8.4:64045150-64045169 | MS.gene36873:intron | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | + | chr8.4:64045125-64045144 | MS.gene36873:intron | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | + | chr8.4:64042945-64042964 | MS.gene36873:intron | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr8.4:64042668-64042687 | MS.gene36873:CDS | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | - | chr8.4:64043425-64043444 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr8.4:64042709-64042728 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | + | chr8.4:64043690-64043709 | MS.gene36873:CDS | 35.0% |
| ! | GAGGCTTTAACAAATTAAGC+GGG | + | chr8.4:64045169-64045188 | MS.gene36873:intron | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | + | chr8.4:64044502-64044521 | MS.gene36873:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr8.4:64044149-64044168 | MS.gene36873:CDS | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | + | chr8.4:64044022-64044041 | MS.gene36873:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8.4:64043862-64043881 | MS.gene36873:CDS | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr8.4:64044998-64045017 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr8.4:64044731-64044750 | None:intergenic | 35.0% |
| !! | TATGCATTGGTCTTCAGTTT+GGG | + | chr8.4:64044079-64044098 | MS.gene36873:CDS | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr8.4:64044671-64044690 | MS.gene36873:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8.4:64043733-64043752 | MS.gene36873:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8.4:64044732-64044751 | MS.gene36873:CDS | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | - | chr8.4:64044185-64044204 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr8.4:64043543-64043562 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | - | chr8.4:64045076-64045095 | None:intergenic | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr8.4:64044396-64044415 | MS.gene36873:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr8.4:64044628-64044647 | MS.gene36873:CDS | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | + | chr8.4:64043429-64043448 | MS.gene36873:intron | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr8.4:64044907-64044926 | MS.gene36873:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr8.4:64044627-64044646 | MS.gene36873:CDS | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | + | chr8.4:64044785-64044804 | MS.gene36873:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr8.4:64044773-64044792 | None:intergenic | 40.0% | |
| GTCAATTCTGATGTAATGCG+CGG | + | chr8.4:64045561-64045580 | MS.gene36873:intron | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | - | chr8.4:64044798-64044817 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr8.4:64044395-64044414 | MS.gene36873:CDS | 40.0% | |
| TCAAACCATATACACAGACC+AGG | + | chr8.4:64043797-64043816 | MS.gene36873:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr8.4:64043539-64043558 | MS.gene36873:intron | 40.0% | |
| TCCATCTGCCCAAAAAATAC+TGG | - | chr8.4:64043128-64043147 | None:intergenic | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | - | chr8.4:64043798-64043817 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | + | chr8.4:64043657-64043676 | MS.gene36873:intron | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | + | chr8.4:64044534-64044553 | MS.gene36873:CDS | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | - | chr8.4:64044795-64044814 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | - | chr8.4:64045138-64045157 | None:intergenic | 40.0% | |
| ! | GGAGAATCTTCCTTTTCGAT+TGG | + | chr8.4:64042987-64043006 | MS.gene36873:CDS | 40.0% |
| ! | TCATGCTGAGTTGGACTTTA+AGG | + | chr8.4:64044247-64044266 | MS.gene36873:CDS | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr8.4:64044990-64045009 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr8.4:64044674-64044693 | MS.gene36873:CDS | 40.0% |
| !! | GTATGCATTGGTCTTCAGTT+TGG | + | chr8.4:64044078-64044097 | MS.gene36873:CDS | 40.0% |
| !! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8.4:64042682-64042701 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | + | chr8.4:64042952-64042971 | MS.gene36873:intron | 40.0% |
| AATGAAGCTCTCTCGAAACC+AGG | + | chr8.4:64043061-64043080 | MS.gene36873:CDS | 45.0% | |
| AGAACTGGACTGTCACATGT+TGG | - | chr8.4:64042694-64042713 | None:intergenic | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | - | chr8.4:64044038-64044057 | None:intergenic | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | + | chr8.4:64044297-64044316 | MS.gene36873:CDS | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | - | chr8.4:64044649-64044668 | None:intergenic | 45.0% | |
| CTCAAGTAGCACAAATGCTC+TGG | - | chr8.4:64042856-64042875 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr8.4:64042736-64042755 | MS.gene36873:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | chr8.4:64044238-64044257 | MS.gene36873:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr8.4:64044547-64044566 | None:intergenic | 45.0% | |
| TCTCCACATGCCAATCGAAA+AGG | - | chr8.4:64043000-64043019 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr8.4:64044629-64044648 | MS.gene36873:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr8.4:64043102-64043121 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8.4:64044919-64044938 | MS.gene36873:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr8.4:64042745-64042764 | None:intergenic | 45.0% | |
| TTGATATCGTTGCGCTTCAG+TGG | - | chr8.4:64044822-64044841 | None:intergenic | 45.0% | |
| TTTCGATTGGCATGTGGAGA+TGG | + | chr8.4:64043000-64043019 | MS.gene36873:CDS | 45.0% | |
| ! | CTTCCTTTTCGATTGGCATG+TGG | + | chr8.4:64042994-64043013 | MS.gene36873:CDS | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | + | chr8.4:64044101-64044120 | MS.gene36873:CDS | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr8.4:64044084-64044103 | MS.gene36873:CDS | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8.4:64042748-64042767 | MS.gene36873:CDS | 45.0% |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr8.4:64043124-64043143 | MS.gene36873:CDS | 45.0% |
| ACCAGCCTGGTCTGTGTATA+TGG | - | chr8.4:64043805-64043824 | None:intergenic | 50.0% | |
| ACCATATACACAGACCAGGC+TGG | + | chr8.4:64043801-64043820 | MS.gene36873:CDS | 50.0% | |
| AGGGTTGTCACAGTCGACAT+TGG | + | chr8.4:64044584-64044603 | MS.gene36873:CDS | 50.0% | |
| CCCAACAGATGGTTCACAGA+CGG | - | chr8.4:64045023-64045042 | None:intergenic | 50.0% | |
| CCGTCTGTGAACCATCTGTT+GGG | + | chr8.4:64045020-64045039 | MS.gene36873:CDS | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | - | chr8.4:64044302-64044321 | None:intergenic | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | + | chr8.4:64044033-64044052 | MS.gene36873:CDS | 50.0% | |
| GGGTTGTCACAGTCGACATT+GGG | + | chr8.4:64044585-64044604 | MS.gene36873:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | + | chr8.4:64043870-64043889 | MS.gene36873:CDS | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | + | chr8.4:64044871-64044890 | MS.gene36873:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr8.4:64044912-64044931 | MS.gene36873:CDS | 50.0% | |
| TGGGTGATCCTATCTTGCCT+TGG | + | chr8.4:64043405-64043424 | MS.gene36873:intron | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | + | chr8.4:64043869-64043888 | MS.gene36873:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8.4:64045034-64045053 | None:intergenic | 50.0% |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr8.4:64042958-64042977 | MS.gene36873:intron | 50.0% |
| ACTTCAACAACGCACCAGCC+TGG | - | chr8.4:64043818-64043837 | None:intergenic | 55.0% | |
| CGATTGGCATGTGGAGATGG+TGG | + | chr8.4:64043003-64043022 | MS.gene36873:CDS | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr8.4:64044911-64044930 | MS.gene36873:CDS | 55.0% | |
| GCCGTCTGTGAACCATCTGT+TGG | + | chr8.4:64045019-64045038 | MS.gene36873:CDS | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | - | chr8.4:64044303-64044322 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8.4:64044925-64044944 | MS.gene36873:CDS | 55.0% | |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr8.4:64042961-64042980 | MS.gene36873:intron | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | + | chr8.4:64044874-64044893 | MS.gene36873:CDS | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr8.4:64042966-64042985 | MS.gene36873:intron | 60.0% | |
| ! | TGGCATGTGGAGATGGTGGC+TGG | + | chr8.4:64043007-64043026 | MS.gene36873:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 64042574 | 64045700 | 64042574 | ID=MS.gene36873 |
| chr8.4 | mRNA | 64042574 | 64045700 | 64042574 | ID=MS.gene36873.t1;Parent=MS.gene36873 |
| chr8.4 | exon | 64042574 | 64042888 | 64042574 | ID=MS.gene36873.t1.exon1;Parent=MS.gene36873.t1 |
| chr8.4 | CDS | 64042574 | 64042888 | 64042574 | ID=cds.MS.gene36873.t1;Parent=MS.gene36873.t1 |
| chr8.4 | exon | 64042974 | 64043232 | 64042974 | ID=MS.gene36873.t1.exon2;Parent=MS.gene36873.t1 |
| chr8.4 | CDS | 64042974 | 64043232 | 64042974 | ID=cds.MS.gene36873.t1;Parent=MS.gene36873.t1 |
| chr8.4 | exon | 64043667 | 64045080 | 64043667 | ID=MS.gene36873.t1.exon3;Parent=MS.gene36873.t1 |
| chr8.4 | CDS | 64043667 | 64045080 | 64043667 | ID=cds.MS.gene36873.t1;Parent=MS.gene36873.t1 |
| chr8.4 | exon | 64045685 | 64045700 | 64045685 | ID=MS.gene36873.t1.exon4;Parent=MS.gene36873.t1 |
| chr8.4 | CDS | 64045685 | 64045700 | 64045685 | ID=cds.MS.gene36873.t1;Parent=MS.gene36873.t1 |
| Gene Sequence |
| Protein sequence |
