AlfalfaGEDB | MS.gene37290

M. sativa cultivar XinJiangDaYe / MS.gene37290

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37290.t1	XP_013467655.2	87.3	102	13	0	4	105	1	102	1.80E-41	178.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37290.t1	Q0WVU3	64.3	98	31	1	1	94	164	261	1.8e-26	119.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37290.t1	A0A2Z6PIM2	82.9	105	18	0	1	105	53	157	1.9e-40	174.5

TFs/TRs:

Gene ID	Type	Classification
MS.gene37290.t1	TF	GARP-G2-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37290.t1	MTR_1g053830	87.755	98	12	0	8	105	1	98	3.78e-61	182
MS.gene37290.t1	MTR_1g053835	80.909	110	16	1	1	105	229	338	2.54e-53	172
MS.gene37290.t1	MTR_7g093030	63.636	110	34	2	2	105	184	293	5.92e-41	137
MS.gene37290.t1	MTR_7g093030	63.063	111	35	2	1	105	183	293	1.38e-37	130
MS.gene37290.t1	MTR_7g098250	50.538	93	44	2	15	105	252	344	1.71e-27	104
MS.gene37290.t1	MTR_1g080330	51.020	98	43	2	1	94	148	244	4.17e-26	98.2
MS.gene37290.t1	MTR_1g080330	52.041	98	42	2	1	94	148	244	1.13e-25	98.6
MS.gene37290.t1	MTR_7g115530	55.556	81	34	2	27	105	220	300	7.64e-25	95.1
MS.gene37290.t1	MTR_7g115530	55.556	81	34	2	27	105	220	300	1.47e-24	94.7
MS.gene37290.t1	MTR_7g115530	55.556	81	34	2	27	105	220	300	2.50e-24	95.5
MS.gene37290.t1	MTR_7g115530	58.571	70	29	0	27	96	220	289	7.53e-24	93.2
MS.gene37290.t1	MTR_7g088070	43.956	91	43	1	18	100	35	125	4.05e-23	90.1
MS.gene37290.t1	MTR_6g032990	58.730	63	26	0	21	83	38	100	3.14e-22	89.4
MS.gene37290.t1	MTR_7g088070	44.211	95	41	3	18	100	35	129	4.94e-22	87.4
MS.gene37290.t1	MTR_2g027860	52.239	67	32	0	27	93	51	117	1.35e-20	84.3
MS.gene37290.t1	MTR_2g086450	53.968	63	29	0	21	83	41	103	1.56e-20	84.7
MS.gene37290.t1	MTR_5g041350	40.964	83	49	0	21	103	11	93	3.82e-20	83.2
MS.gene37290.t1	MTR_7g068600	49.425	87	39	3	13	95	2	87	4.60e-19	79.0
MS.gene37290.t1	MTR_7g115530	66.000	50	17	0	27	76	220	269	6.00e-19	79.3
MS.gene37290.t1	MTR_2g027800	60.000	55	22	0	27	81	41	95	1.13e-18	79.0
MS.gene37290.t1	MTR_5g027440	53.571	56	26	0	27	82	27	82	1.35e-18	78.2
MS.gene37290.t1	MTR_2g027800	59.259	54	22	0	27	80	41	94	4.36e-18	77.0
MS.gene37290.t1	MTR_7g115530	65.306	49	17	0	27	75	220	268	5.09e-18	77.0
MS.gene37290.t1	MTR_4g081710	49.180	61	31	0	21	81	13	73	6.43e-18	77.0
MS.gene37290.t1	MTR_2g084230	50.667	75	36	1	27	101	99	172	1.07e-17	76.3
MS.gene37290.t1	MTR_2g084230	50.667	75	36	1	27	101	99	172	1.34e-17	76.6
MS.gene37290.t1	MTR_1g090670	56.364	55	24	0	27	81	46	100	1.47e-17	75.9
MS.gene37290.t1	MTR_2g023580	60.000	55	22	0	27	81	57	111	2.32e-17	74.3
MS.gene37290.t1	MTR_7g069660	49.315	73	36	1	27	99	73	144	3.46e-17	75.1
MS.gene37290.t1	MTR_8g086410	54.839	62	27	1	27	88	111	171	6.37e-17	74.7
MS.gene37290.t1	MTR_8g086410	54.839	62	27	1	27	88	113	173	6.65e-17	74.7
MS.gene37290.t1	MTR_6g444980	52.727	55	26	0	27	81	37	91	2.20e-16	73.2
MS.gene37290.t1	MTR_6g444980	52.727	55	26	0	27	81	37	91	2.40e-16	72.8
MS.gene37290.t1	MTR_0223s0040	48.000	75	32	1	27	101	20	87	3.92e-16	71.6
MS.gene37290.t1	MTR_1g053800	53.731	67	31	0	27	93	179	245	5.21e-16	71.6
MS.gene37290.t1	MTR_6g071625	52.459	61	29	0	27	87	204	264	1.25e-15	70.9
MS.gene37290.t1	MTR_2g016220	56.364	55	24	0	27	81	91	145	2.47e-15	70.1
MS.gene37290.t1	MTR_4g113140	41.379	87	51	0	1	87	211	297	2.47e-15	70.5
MS.gene37290.t1	MTR_2g016220	56.364	55	24	0	27	81	91	145	2.57e-15	70.1
MS.gene37290.t1	MTR_3g450310	52.542	59	28	0	23	81	17	75	4.56e-15	67.8
MS.gene37290.t1	MTR_8g086410	55.769	52	23	0	27	78	113	164	4.67e-15	69.7
MS.gene37290.t1	MTR_3g064840	52.459	61	29	0	27	87	276	336	5.20e-15	69.3
MS.gene37290.t1	MTR_8g066310	43.023	86	41	2	27	104	175	260	6.65e-15	68.9
MS.gene37290.t1	MTR_7g093010	53.226	62	29	0	17	78	205	266	2.09e-14	67.4
MS.gene37290.t1	MTR_4g086835	39.535	86	48	1	4	89	257	338	2.61e-14	67.4
MS.gene37290.t1	MTR_1g112370	59.615	52	21	0	27	78	24	75	2.63e-14	67.0
MS.gene37290.t1	MTR_5g029470	54.545	55	25	0	27	81	221	275	6.20e-14	66.2
MS.gene37290.t1	MTR_2g450070	51.667	60	28	1	27	86	215	273	9.31e-14	65.9
MS.gene37290.t1	MTR_2g450070	51.667	60	28	1	27	86	215	273	1.07e-13	65.9
MS.gene37290.t1	MTR_2g016220	57.143	49	21	0	27	75	91	139	1.63e-13	65.1
MS.gene37290.t1	MTR_4g021855	46.377	69	34	2	13	79	154	221	1.93e-13	64.7
MS.gene37290.t1	MTR_4g021790	52.830	53	24	1	27	79	170	221	2.12e-13	64.3
MS.gene37290.t1	MTR_1g021520	43.243	74	42	0	27	100	128	201	2.18e-13	64.3
MS.gene37290.t1	MTR_4g086835	39.535	86	47	2	4	89	257	337	7.89e-13	63.2
MS.gene37290.t1	MTR_1g093080	49.057	53	27	0	27	79	213	265	3.00e-12	61.6
MS.gene37290.t1	MTR_7g117705	46.269	67	33	2	27	93	193	256	4.39e-12	61.2
MS.gene37290.t1	MTR_1g013180	44.872	78	38	2	20	93	337	413	4.75e-12	60.8
MS.gene37290.t1	MTR_7g089010	52.830	53	24	1	27	79	93	144	5.42e-12	60.5
MS.gene37290.t1	MTR_2g034960	37.647	85	49	3	21	105	207	287	6.30e-12	60.8
MS.gene37290.t1	MTR_5g017980	49.123	57	29	0	23	79	191	247	7.95e-12	60.1
MS.gene37290.t1	MTR_4g121020	48.333	60	30	1	20	79	106	164	9.07e-12	60.1
MS.gene37290.t1	MTR_4g064730	50.943	53	25	1	27	79	133	184	1.02e-11	59.7
MS.gene37290.t1	MTR_4g121020	48.333	60	30	1	20	79	210	268	1.10e-11	60.1
MS.gene37290.t1	MTR_4g121020	48.333	60	30	1	20	79	210	268	1.12e-11	60.1
MS.gene37290.t1	MTR_1g032570	47.458	59	30	1	21	79	127	184	1.93e-11	59.3
MS.gene37290.t1	MTR_1g013170	54.717	53	23	1	27	79	193	244	2.25e-11	58.9
MS.gene37290.t1	MTR_1g032570	47.458	59	30	1	21	79	196	253	2.44e-11	58.9
MS.gene37290.t1	MTR_4g131600	46.154	65	33	2	27	90	203	266	2.84e-11	58.9
MS.gene37290.t1	MTR_4g098870	46.774	62	32	1	27	88	312	372	2.99e-11	58.9
MS.gene37290.t1	MTR_4g098870	46.774	62	32	1	27	88	332	392	3.06e-11	58.5
MS.gene37290.t1	MTR_4g098870	46.774	62	32	1	27	88	351	411	3.35e-11	58.5
MS.gene37290.t1	MTR_4g098870	46.774	62	32	1	27	88	332	392	3.72e-11	58.5
MS.gene37290.t1	MTR_4g098870	46.774	62	32	1	27	88	312	372	3.74e-11	58.5
MS.gene37290.t1	MTR_5g014040	50.909	55	26	1	27	81	313	366	4.11e-11	58.2
MS.gene37290.t1	MTR_5g054300	47.170	53	28	0	27	79	200	252	4.37e-11	58.2
MS.gene37290.t1	MTR_4g021760	48.077	52	26	1	27	78	171	221	6.66e-11	57.4
MS.gene37290.t1	MTR_3g086100	38.824	85	49	2	20	104	123	204	9.41e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37290.t1	AT5G06800	59.091	110	40	2	1	105	164	273	1.61e-35	124
MS.gene37290.t1	AT5G06800	64.516	93	29	1	1	89	164	256	7.30e-34	118
MS.gene37290.t1	AT5G06800	56.522	115	40	3	1	105	164	278	3.80e-33	118
MS.gene37290.t1	AT3G13040	48.039	102	42	2	3	96	211	309	9.72e-26	99.4
MS.gene37290.t1	AT3G13040	48.039	102	42	2	3	96	211	309	9.72e-26	99.4
MS.gene37290.t1	AT3G13040	48.039	102	42	2	3	96	211	309	9.72e-26	99.4
MS.gene37290.t1	AT5G29000	46.364	110	53	4	1	105	165	273	1.66e-25	98.2
MS.gene37290.t1	AT5G29000	46.364	110	53	4	1	105	165	273	1.66e-25	98.2
MS.gene37290.t1	AT5G29000	46.364	110	53	4	1	105	208	316	2.36e-25	98.2
MS.gene37290.t1	AT3G04450	59.701	67	27	0	19	85	192	258	4.27e-25	97.4
MS.gene37290.t1	AT3G04450	59.701	67	27	0	19	85	192	258	4.27e-25	97.4
MS.gene37290.t1	AT3G04450	50.588	85	41	1	1	85	215	298	4.52e-25	95.9
MS.gene37290.t1	AT3G04450	59.701	67	27	0	19	85	232	298	6.71e-25	97.1
MS.gene37290.t1	AT4G28610	51.020	98	41	3	15	105	211	308	6.94e-25	96.7
MS.gene37290.t1	AT5G29000	45.192	104	54	2	1	102	208	310	1.34e-24	94.7
MS.gene37290.t1	AT2G20400	55.128	78	34	1	27	103	233	310	1.72e-23	92.8
MS.gene37290.t1	AT2G20400	54.430	79	34	2	27	103	233	311	8.37e-22	88.2
MS.gene37290.t1	AT2G01060	53.425	73	31	1	16	85	3	75	1.13e-21	86.7
MS.gene37290.t1	AT3G04030	51.316	76	34	2	11	83	28	103	2.29e-21	87.0
MS.gene37290.t1	AT3G04030	51.316	76	34	2	11	83	28	103	2.39e-21	87.0
MS.gene37290.t1	AT5G18240	55.556	63	28	0	21	83	41	103	6.29e-21	85.9
MS.gene37290.t1	AT5G18240	55.556	63	28	0	21	83	41	103	6.29e-21	85.9
MS.gene37290.t1	AT5G18240	55.556	63	28	0	21	83	41	103	6.35e-21	85.9
MS.gene37290.t1	AT5G18240	55.556	63	28	0	21	83	41	103	6.53e-21	85.9
MS.gene37290.t1	AT5G18240	55.556	63	28	0	21	83	41	103	6.53e-21	85.9
MS.gene37290.t1	AT5G45580	48.810	84	31	3	27	103	9	87	1.53e-20	83.2
MS.gene37290.t1	AT5G45580	48.810	84	31	3	27	103	25	103	1.90e-20	83.2
MS.gene37290.t1	AT1G69580	52.381	63	30	0	21	83	30	92	1.51e-18	79.0
MS.gene37290.t1	AT1G69580	52.381	63	30	0	21	83	30	92	1.59e-18	79.0
MS.gene37290.t1	AT3G04030	48.684	76	35	3	11	83	28	102	1.94e-18	79.0
MS.gene37290.t1	AT3G12730	54.545	55	25	0	27	81	25	79	3.26e-17	73.9
MS.gene37290.t1	AT2G40260	48.718	78	34	2	18	90	70	146	1.25e-16	73.9
MS.gene37290.t1	AT3G24120	50.909	55	27	0	27	81	43	97	1.71e-16	72.8
MS.gene37290.t1	AT3G24120	50.909	55	27	0	27	81	43	97	1.72e-16	72.8
MS.gene37290.t1	AT4G13640	50.909	55	27	0	27	81	39	93	1.73e-16	72.8
MS.gene37290.t1	AT4G13640	50.909	55	27	0	27	81	39	93	1.88e-16	72.8
MS.gene37290.t1	AT1G79430	52.727	55	26	0	27	81	36	90	2.14e-16	73.2
MS.gene37290.t1	AT4G04605	48.052	77	39	1	14	90	3	78	2.44e-16	71.2
MS.gene37290.t1	AT5G16560	47.500	80	37	1	27	101	221	300	3.71e-16	72.8
MS.gene37290.t1	AT2G38300	56.364	55	24	0	27	81	56	110	3.98e-16	72.4
MS.gene37290.t1	AT2G42660	54.098	61	26	1	27	87	52	110	6.27e-16	70.9
MS.gene37290.t1	AT1G14600	56.364	55	24	0	27	81	25	79	1.82e-15	69.7
MS.gene37290.t1	AT2G02060	59.615	52	21	0	27	78	31	82	2.43e-15	69.3
MS.gene37290.t1	AT2G02060	59.615	52	21	0	27	78	31	82	2.43e-15	69.3
MS.gene37290.t1	AT4G04580	47.059	68	36	0	14	81	3	70	1.22e-14	65.9
MS.gene37290.t1	AT4G17695	48.529	68	33	1	27	92	166	233	1.37e-14	67.8
MS.gene37290.t1	AT5G42630	47.826	69	34	1	27	93	107	175	2.53e-14	66.2
MS.gene37290.t1	AT5G42630	47.826	69	34	1	27	93	107	175	3.37e-14	66.6
MS.gene37290.t1	AT1G32240	48.529	68	33	1	27	92	215	282	4.24e-14	66.6
MS.gene37290.t1	AT1G32240	48.529	68	33	1	27	92	215	282	4.47e-14	66.6
MS.gene37290.t1	AT2G03500	49.180	61	31	0	27	87	235	295	4.79e-14	66.6
MS.gene37290.t1	AT2G06020	47.273	55	29	0	27	81	88	142	8.33e-14	65.5
MS.gene37290.t1	AT5G58080	42.308	78	42	2	18	95	187	261	5.70e-13	63.5
MS.gene37290.t1	AT3G16857	47.945	73	34	3	27	99	169	237	6.15e-13	63.5
MS.gene37290.t1	AT3G16857	47.945	73	34	3	27	99	239	307	6.83e-13	63.5
MS.gene37290.t1	AT3G16857	47.945	73	34	3	27	99	239	307	7.54e-13	63.5
MS.gene37290.t1	AT1G49560	40.541	74	44	0	6	79	173	246	8.38e-13	63.2
MS.gene37290.t1	AT4G37180	54.717	53	24	0	27	79	212	264	1.59e-12	62.4
MS.gene37290.t1	AT4G37180	54.717	53	24	0	27	79	219	271	1.94e-12	62.0
MS.gene37290.t1	AT5G59570	44.615	65	35	1	15	79	131	194	2.12e-12	61.6
MS.gene37290.t1	AT5G59570	44.615	65	35	1	15	79	131	194	2.12e-12	61.6
MS.gene37290.t1	AT5G05090	52.830	53	24	1	27	79	83	134	2.12e-12	61.6
MS.gene37290.t1	AT1G25550	50.943	53	26	0	27	79	211	263	2.46e-12	61.6
MS.gene37290.t1	AT3G46640	50.943	53	25	1	27	79	146	197	3.32e-12	61.2
MS.gene37290.t1	AT3G46640	50.943	53	25	1	27	79	146	197	3.32e-12	61.2
MS.gene37290.t1	AT3G46640	50.943	53	25	1	27	79	146	197	4.62e-12	60.8
MS.gene37290.t1	AT2G01760	38.710	93	45	4	12	101	130	213	6.08e-12	60.5
MS.gene37290.t1	AT2G40970	50.943	53	25	1	27	79	107	158	1.18e-11	59.3
MS.gene37290.t1	AT2G01760	38.710	93	45	4	12	101	223	306	1.51e-11	59.7
MS.gene37290.t1	AT4G04555	47.692	65	29	1	19	78	3	67	1.60e-11	56.6
MS.gene37290.t1	AT2G25180	54.717	53	23	1	27	79	197	248	1.69e-11	59.7
MS.gene37290.t1	AT1G68670	49.057	53	27	0	27	79	217	269	3.63e-11	58.5
MS.gene37290.t1	AT2G01760	38.710	93	45	4	12	101	195	278	3.70e-11	58.5
MS.gene37290.t1	AT4G31920	51.852	54	25	1	27	80	185	237	4.11e-11	58.5

Find 20 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAGCATTAATATAGCTTT+TGG	0.283859	1.2:+39696727	None:intergenic
CCAACAATGTCCACAATTCC+TGG	0.309255	1.2:-39697157	MS.gene37290:CDS
CCATTAGTAGCAGGGTTTCC+AGG	0.358671	1.2:+39697139	None:intergenic
CCAGGAATTGTGGACATTGT+TGG	0.385875	1.2:+39697157	None:intergenic
ATACATGGCTGAACCAGCTC+AGG	0.417044	1.2:-39696641	MS.gene37290:CDS
CCTGGAAACCCTGCTACTAA+TGG	0.418539	1.2:-39697139	MS.gene37290:CDS
ACAAACTTCTCATGAAGGTC+AGG	0.464082	1.2:+39697079	None:intergenic
AAAAGCTATATTAATGCTGA+TGG	0.488564	1.2:-39696725	MS.gene37290:CDS
ACTGATGAACCATTAGTAGC+AGG	0.494537	1.2:+39697130	None:intergenic
GTTGAGTGTGTGAATCGCCT+TGG	0.509079	1.2:-39697058	MS.gene37290:CDS
AGCAGGGTTTCCAGGAATTG+TGG	0.519005	1.2:+39697147	None:intergenic
CCTAGAGAATTACCCTGAGC+TGG	0.543208	1.2:+39696628	None:intergenic
CTGATGAACCATTAGTAGCA+GGG	0.553912	1.2:+39697131	None:intergenic
ATATAGAATTGCAAAATACA+TGG	0.592697	1.2:-39696656	MS.gene37290:CDS
GAGTGTGTGAATCGCCTTGG+TGG	0.595652	1.2:-39697055	MS.gene37290:CDS
ACTCAACAAACTTCTCATGA+AGG	0.598469	1.2:+39697074	None:intergenic
TTAATGCTGATGGATTCAGA+TGG	0.633783	1.2:-39696715	MS.gene37290:CDS
CAAGTAATACAAGAATAACA+TGG	0.643229	1.2:-39697105	MS.gene37290:CDS
TACATGGCTGAACCAGCTCA+GGG	0.652414	1.2:-39696640	MS.gene37290:intron
ACTAACTCTCGGCACCACCA+AGG	0.694145	1.2:+39697041	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATATTTACATTTTTTTGT+GGG	+	chr1.2:39696327-39696346	None:intergenic	10.0%
!!!	TAAATATTTACATTTTTTTG+TGG	+	chr1.2:39696328-39696347	None:intergenic	10.0%
!!	ATCTGTAAAAAAAATTATGA+AGG	+	chr1.2:39696803-39696822	None:intergenic	15.0%
!!	TATTTAATATATGATTGTCT+TGG	-	chr1.2:39696342-39696361	MS.gene37290:intron	15.0%
!!	AAATGATGTTAGAAAGTAAA+TGG	-	chr1.2:39696295-39696314	MS.gene37290:intron	20.0%
!!	ATATAGAATTGCAAAATACA+TGG	-	chr1.2:39696458-39696477	MS.gene37290:intron	20.0%
!!	TACCGATAAAATAAACATTA+GGG	-	chr1.2:39696137-39696156	MS.gene37290:intron	20.0%
!!	TTAAATTTCCATTGAAGTTT+AGG	+	chr1.2:39696845-39696864	None:intergenic	20.0%
!!	TTACCGATAAAATAAACATT+AGG	-	chr1.2:39696136-39696155	MS.gene37290:intron	20.0%
!!!	ATTTAATGTTTTAGGAAACT+CGG	-	chr1.2:39696859-39696878	MS.gene37290:intron	20.0%
!!!	CAATGGAAATTTAATGTTTT+AGG	-	chr1.2:39696851-39696870	MS.gene37290:intron	20.0%
!	AAAAGCTATATTAATGCTGA+TGG	-	chr1.2:39696389-39696408	MS.gene37290:intron	25.0%
!	AAGTTATGATTGAGAACTTA+TGG	-	chr1.2:39696663-39696682	MS.gene37290:CDS	25.0%
!	ATTCTTAACCTAAACTTCAA+TGG	-	chr1.2:39696834-39696853	MS.gene37290:intron	25.0%
!	ATTGAGAACTTATGGAAATA+AGG	-	chr1.2:39696671-39696690	MS.gene37290:CDS	25.0%
!	CAAGTAATACAAGAATAACA+TGG	-	chr1.2:39696009-39696028	MS.gene37290:intron	25.0%
!	GTTGTTTATCTAAATTACCA+AGG	+	chr1.2:39696548-39696567	None:intergenic	25.0%
!!	ATCAGCATTAATATAGCTTT+TGG	+	chr1.2:39696390-39696409	None:intergenic	25.0%
!!	TCTTCAAATGACTTTTAACA+TGG	+	chr1.2:39696437-39696456	None:intergenic	25.0%
!!	TTCTATAATGTAAAGTACCT+TGG	-	chr1.2:39696528-39696547	MS.gene37290:intron	25.0%
!!!	CTCCCTAATGTTTATTTTAT+CGG	+	chr1.2:39696142-39696161	None:intergenic	25.0%
	AAACTGTTATCATGTTTCAG+GGG	-	chr1.2:39697123-39697142	MS.gene37290:CDS	30.0%
	ACAAACTGTTATCATGTTTC+AGG	-	chr1.2:39697121-39697140	MS.gene37290:CDS	30.0%
	ATCAACTTTACTTCCTTTAG+TGG	-	chr1.2:39697086-39697105	MS.gene37290:CDS	30.0%
	CAAACTGTTATCATGTTTCA+GGG	-	chr1.2:39697122-39697141	MS.gene37290:CDS	30.0%
	TAAATGCATCCGTTTACTTT+CGG	-	chr1.2:39696095-39696114	MS.gene37290:intron	30.0%
	TAAATGCGTCCATTTACTTT+CGG	-	chr1.2:39696162-39696181	MS.gene37290:intron	30.0%
	TGAAAGTTCGTAATTTCCAT+TGG	+	chr1.2:39697062-39697081	None:intergenic	30.0%
	TTAGACTTTAGATCCACTAA+AGG	+	chr1.2:39697102-39697121	None:intergenic	30.0%
	ACTCAACAAACTTCTCATGA+AGG	+	chr1.2:39696043-39696062	None:intergenic	35.0%
	ATTATGAAGGCTGTTCTGAT+CGG	+	chr1.2:39696790-39696809	None:intergenic	35.0%
	CAGAAAACACCGAAAGTAAA+CGG	+	chr1.2:39696107-39696126	None:intergenic	35.0%
	CAGTTAACACCGAAAGTAAA+TGG	+	chr1.2:39696174-39696193	None:intergenic	35.0%
!	TTGTTGGAGACATTTTCTCT+TGG	+	chr1.2:39695944-39695963	None:intergenic	35.0%
!!	TTAATGCTGATGGATTCAGA+TGG	-	chr1.2:39696399-39696418	MS.gene37290:intron	35.0%
!!!	GTTTTAGGAAACTCGGAATA+TGG	-	chr1.2:39696866-39696885	MS.gene37290:intron	35.0%
!!!	TTACATTTTTTTGTGGGCTG+TGG	+	chr1.2:39696321-39696340	None:intergenic	35.0%
	ACAAACTTCTCATGAAGGTC+AGG	+	chr1.2:39696038-39696057	None:intergenic	40.0%
	ACGGTGAAAACTTAGAACCT+TGG	+	chr1.2:39697027-39697046	None:intergenic	40.0%
	ACTGATGAACCATTAGTAGC+AGG	+	chr1.2:39695987-39696006	None:intergenic	40.0%
	AGCCCACTGAAATTGACATA+GGG	-	chr1.2:39696965-39696984	MS.gene37290:intron	40.0%
	CGGATGCATTTACTAACTCT+CGG	+	chr1.2:39696087-39696106	None:intergenic	40.0%
	CGTGTTTCTCTTAAGGTTTC+GGG	+	chr1.2:39697002-39697021	None:intergenic	40.0%
	CTCCCTATGTCAATTTCAGT+GGG	+	chr1.2:39696970-39696989	None:intergenic	40.0%
	CTGATGAACCATTAGTAGCA+GGG	+	chr1.2:39695986-39696005	None:intergenic	40.0%
	GCGTGTTTCTCTTAAGGTTT+CGG	+	chr1.2:39697003-39697022	None:intergenic	40.0%
	GGAACTTATAGCTAGAGCTT+TGG	-	chr1.2:39696939-39696958	MS.gene37290:intron	40.0%
	TAGCCCACTGAAATTGACAT+AGG	-	chr1.2:39696964-39696983	MS.gene37290:intron	40.0%
	TCTCCCTATGTCAATTTCAG+TGG	+	chr1.2:39696971-39696990	None:intergenic	40.0%
!!!	GGTTCTAAGTTTTCACCGTT+AGG	-	chr1.2:39697028-39697047	MS.gene37290:intron	40.0%
	CCAACAATGTCCACAATTCC+TGG	-	chr1.2:39695957-39695976	MS.gene37290:CDS	45.0%
	CCAGGAATTGTGGACATTGT+TGG	+	chr1.2:39695960-39695979	None:intergenic	45.0%
	CTTAAGAGAAACACGCTCCA+AGG	-	chr1.2:39697007-39697026	MS.gene37290:intron	45.0%
	CTTGGAGCGTGTTTCTCTTA+AGG	+	chr1.2:39697009-39697028	None:intergenic	45.0%
	TCTTGGCTGCTTGATTGTAG+AGG	-	chr1.2:39696359-39696378	MS.gene37290:intron	45.0%
!!!	TTATAAATTTTCTTTTATAT+TGG	+	chr1.2:39696233-39696252	None:intergenic	5.0%
	AGCAGGGTTTCCAGGAATTG+TGG	+	chr1.2:39695970-39695989	None:intergenic	50.0%
	ATACATGGCTGAACCAGCTC+AGG	-	chr1.2:39696473-39696492	MS.gene37290:intron	50.0%
	CCAGCTCAGGGTAATTCTCT+AGG	-	chr1.2:39696486-39696505	MS.gene37290:intron	50.0%
	CCATTAGTAGCAGGGTTTCC+AGG	+	chr1.2:39695978-39695997	None:intergenic	50.0%
	CCATTGGAGTGTGCTCCTAA+CGG	+	chr1.2:39697046-39697065	None:intergenic	50.0%
	CCTAGAGAATTACCCTGAGC+TGG	+	chr1.2:39696489-39696508	None:intergenic	50.0%
	CCTGGAAACCCTGCTACTAA+TGG	-	chr1.2:39695975-39695994	MS.gene37290:intron	50.0%
	GTTGAGTGTGTGAATCGCCT+TGG	-	chr1.2:39696056-39696075	MS.gene37290:intron	50.0%
	TACATGGCTGAACCAGCTCA+GGG	-	chr1.2:39696474-39696493	MS.gene37290:intron	50.0%
	TATAAGTTCCCCCCTGCTAG+TGG	+	chr1.2:39696929-39696948	None:intergenic	50.0%
	TGGTCCAAGACCGAATAGTC+CGG	-	chr1.2:39696886-39696905	MS.gene37290:intron	50.0%
!	GATTAGTCCCCCGGACTATT+CGG	+	chr1.2:39696899-39696918	None:intergenic	50.0%
	AATCTCCCCGTCCACTAGCA+GGG	-	chr1.2:39696915-39696934	MS.gene37290:intron	55.0%
	ACTAACTCTCGGCACCACCA+AGG	+	chr1.2:39696076-39696095	None:intergenic	55.0%
	GAGTGTGTGAATCGCCTTGG+TGG	-	chr1.2:39696059-39696078	MS.gene37290:intron	55.0%
	GGTCCAAGACCGAATAGTCC+GGG	-	chr1.2:39696887-39696906	MS.gene37290:intron	55.0%
	GTCCAAGACCGAATAGTCCG+GGG	-	chr1.2:39696888-39696907	MS.gene37290:intron	55.0%
	TAATCTCCCCGTCCACTAGC+AGG	-	chr1.2:39696914-39696933	MS.gene37290:intron	55.0%
	TCCAAGACCGAATAGTCCGG+GGG	-	chr1.2:39696889-39696908	MS.gene37290:intron	55.0%
!	CCGTTAGGAGCACACTCCAA+TGG	-	chr1.2:39697043-39697062	MS.gene37290:intron	55.0%
	AGTTCCCCCCTGCTAGTGGA+CGG	+	chr1.2:39696925-39696944	None:intergenic	60.0%
	ATCTCCCCGTCCACTAGCAG+GGG	-	chr1.2:39696916-39696935	MS.gene37290:intron	60.0%
	TCCCCCGGACTATTCGGTCT+TGG	+	chr1.2:39696893-39696912	None:intergenic	60.0%
	TCTCCCCGTCCACTAGCAGG+GGG	-	chr1.2:39696917-39696936	MS.gene37290:intron	65.0%
!	GGACGGGGAGATTAGTCCCC+CGG	+	chr1.2:39696908-39696927	None:intergenic	65.0%
!	GTTCCCCCCTGCTAGTGGAC+GGG	+	chr1.2:39696924-39696943	None:intergenic	65.0%
!	TTCCCCCCTGCTAGTGGACG+GGG	+	chr1.2:39696923-39696942	None:intergenic	65.0%
	CTCCCCGTCCACTAGCAGGG+GGG	-	chr1.2:39696918-39696937	MS.gene37290:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	39695942	39697194	39695942	ID=MS.gene37290
chr1.2	mRNA	39695942	39697194	39695942	ID=MS.gene37290.t1;Parent=MS.gene37290
chr1.2	exon	39697047	39697194	39697047	ID=MS.gene37290.t1.exon1;Parent=MS.gene37290.t1
chr1.2	CDS	39697047	39697194	39697047	ID=cds.MS.gene37290.t1;Parent=MS.gene37290.t1
chr1.2	exon	39696641	39696757	39696641	ID=MS.gene37290.t1.exon2;Parent=MS.gene37290.t1
chr1.2	CDS	39696641	39696757	39696641	ID=cds.MS.gene37290.t1;Parent=MS.gene37290.t1
chr1.2	exon	39695942	39695993	39695942	ID=MS.gene37290.t1.exon3;Parent=MS.gene37290.t1
chr1.2	CDS	39695942	39695993	39695942	ID=cds.MS.gene37290.t1;Parent=MS.gene37290.t1

Gene Sequence

>MS.gene37290

CAAGAGAAAATGTCTCCAACAATGTCCACAATTCCTGGAAACCCTGCTACTAATGGTTCATCAGTTTCAAGTAATACAAGAATAACATGGACTCCTGACCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGTGGTGCCGAGAGTTAGTAAATGCATCCGTTTACTTTCGGTGTTTTCTGTTTCTATTTTTACCGATAAAATAAACATTAGGGAGTAAATGCGTCCATTTACTTTCGGTGTTAACTGTTTCTGAAAAATTTGCAAACATTGTTTGCAGTGTTTCCAATATAAAAGAAAATTTATAACTAAATGTCATTTTAGTCGCTCACGCACAAAGTAAAAATTGAAAATGATGTTAGAAAGTAAATGGCCACAGCCCACAAAAAAATGTAAATATTTAATATATGATTGTCTTGGCTGCTTGATTGTAGAGGCGTTACCAAAAGCTATATTAATGCTGATGGATTCAGATGGATTGACAATTTTCCATGTTAAAAGTCATTTGAAGAAATATAGAATTGCAAAATACATGGCTGAACCAGCTCAGGGTAATTCTCTAGGCATAGTTACAGTCTTGCTTTTCTATAATGTAAAGTACCTTGGTAATTTAGATAAACAACTTAATTAAGTGCTTGTAGCAAAAGCTATTATAGTATAAATGCTATGTTTAAGATAAAGTAAAACTGTATTCAAATTAGTTATAAGTTGTTTTCATAAGTTATGATTGAGAACTTATGGAAATAAGGTCAAAACAGCTTATAGACATATTATATATTGTTTGCATAAGCTCTTGCAAGCAGTGTCACTAGTAATTGTGTCAATAGATATGCTCAAATAATCCGATCAGAACAGCCTTCATAATTTTTTTTACAGATTATCATCAGTTATTCTTAACCTAAACTTCAATGGAAATTTAATGTTTTAGGAAACTCGGAATATGGTCCAAGACCGAATAGTCCGGGGGACTAATCTCCCCGTCCACTAGCAGGGGGGAACTTATAGCTAGAGCTTTGGATTAGCCCACTGAAATTGACATAGGGAGAGATTTGAACCCGAAACCTTAAGAGAAACACGCTCCAAGGTTCTAAGTTTTCACCGTTAGGAGCACACTCCAATGGAAATTACGAACTTTCACGTTATCAACTTTACTTCCTTTAGTGGATCTAAAGTCTAACAAACTGTTATCATGTTTCAGGGGAATCTGAGAAAAGAACAAATGTAGAGAATGTGCATCTTGATGTCAAATC

Protein sequence

>MS.gene37290.t1

QEKMSPTMSTIPGNPATNGSSVSSNTRITWTPDLHEKFVECVNRLGGAEKALPKAILMLMDSDGLTIFHVKSHLKKYRIAKYMAEPAQGESEKRTNVENVHLDVK