AlfalfaGEDB | MS.gene37539

M. sativa cultivar XinJiangDaYe / MS.gene37539

KEGG: -
GO: -
PFAM: PF03634.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37539.t1	XP_013444971.1	88.4	337	29	2	1	331	1	333	3.50E-115	424.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37539.t1	O64647	46.3	294	109	9	72	330	73	352	1.3e-46	188.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37539.t1	A0A072TP77	88.4	337	29	2	1	331	1	333	2.5e-115	424.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene37539.t1	TF	TCP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37539.t1	MTR_8g033070	92.285	337	16	2	1	331	1	333	0.0	567
MS.gene37539.t1	MTR_1g101810	46.557	305	120	12	48	329	44	328	1.47e-68	218
MS.gene37539.t1	MTR_1g101810	46.557	305	120	12	48	329	74	358	3.18e-68	218
MS.gene37539.t1	MTR_7g028160	75.610	82	20	0	70	151	46	127	1.71e-38	138
MS.gene37539.t1	MTR_5g039600	79.221	77	16	0	70	146	63	139	2.08e-37	138
MS.gene37539.t1	MTR_4g108370	83.562	73	12	0	70	142	93	165	1.09e-36	137
MS.gene37539.t1	MTR_2g006150	78.947	76	16	0	71	146	127	202	4.83e-36	135
MS.gene37539.t1	MTR_2g006150	78.947	76	16	0	71	146	127	202	5.65e-36	135
MS.gene37539.t1	MTR_1g063870	87.500	64	8	0	73	136	48	111	1.28e-34	125
MS.gene37539.t1	MTR_1g114380	68.293	82	26	0	65	146	24	105	4.74e-32	120
MS.gene37539.t1	MTR_1g038650	77.612	67	15	0	70	136	28	94	1.65e-31	118

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37539.t1	AT2G45680	52.667	300	85	11	70	330	71	352	1.57e-79	246
MS.gene37539.t1	AT5G51910	51.504	266	79	10	70	324	53	279	4.58e-68	215
MS.gene37539.t1	AT5G51910	51.504	266	79	10	70	324	53	279	4.58e-68	215
MS.gene37539.t1	AT1G69690	83.562	73	12	0	70	142	48	120	1.86e-37	136
MS.gene37539.t1	AT3G47620	69.149	94	28	1	49	142	93	185	3.70e-36	136
MS.gene37539.t1	AT3G27010	87.879	66	8	0	70	135	74	139	1.77e-35	131
MS.gene37539.t1	AT3G27010	87.879	66	8	0	70	135	74	139	1.77e-35	131
MS.gene37539.t1	AT1G72010	78.082	73	16	0	74	146	63	135	1.31e-34	130
MS.gene37539.t1	AT1G58100	84.848	66	10	0	71	136	57	122	5.14e-34	129
MS.gene37539.t1	AT1G35560	75.342	73	18	0	74	146	55	127	8.82e-32	122
MS.gene37539.t1	AT5G23280	71.622	74	21	0	63	136	28	101	4.32e-31	118
MS.gene37539.t1	AT5G08330	77.612	67	15	0	70	136	27	93	4.60e-31	117
MS.gene37539.t1	AT5G41030	67.164	67	22	0	69	135	63	129	9.21e-28	108
MS.gene37539.t1	AT2G37000	78.333	60	13	0	74	133	43	102	1.38e-26	104
MS.gene37539.t1	AT3G45150	59.375	64	26	0	69	132	12	75	2.46e-21	89.7
MS.gene37539.t1	AT1G58100	86.111	36	5	0	71	106	57	92	1.49e-14	74.3

Find 83 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGGGCCTGGGTTTGGGCT+TGG	0.109243	8.3:+60838820	None:intergenic
CTTGAGCTTGGGCCTGGGTT+TGG	0.124774	8.3:+60838814	None:intergenic
TTGAGCTTGGGCCTGGGTTT+GGG	0.152560	8.3:+60838815	None:intergenic
TTGGGCCTGGGTTTGGGCTT+GGG	0.181827	8.3:+60838821	None:intergenic
GTTGGGCTTGAGCTTGGGCC+TGG	0.187452	8.3:+60838808	None:intergenic
TTCTATCTCCGGTTCCTCTT+TGG	0.190495	8.3:+60838935	None:intergenic
TGTTGGTTTGGTTCTTGATT+AGG	0.203445	8.3:+60838516	None:intergenic
GTTGGTTTGGTTCTTGATTA+GGG	0.229302	8.3:+60838517	None:intergenic
TTGTGGGTTGTTGAGGAATT+AGG	0.287595	8.3:+60838346	None:intergenic
TCTATCTCCGGTTCCTCTTT+GGG	0.291488	8.3:+60838936	None:intergenic
CGGACTTATGTCCGAGTTCT+CGG	0.317153	8.3:+60838676	None:intergenic
GGCGGGGACTGTGCCGGTTC+CGG	0.330630	8.3:+60838596	None:intergenic
GCTTGTTGAACTTGAATAAC+TGG	0.332426	8.3:+60838171	None:intergenic
GTTGTTGAGGAATTAGGTTT+AGG	0.343171	8.3:+60838352	None:intergenic
ATCATTGCTGCCACCGGAAC+CGG	0.350131	8.3:-60838609	MS.gene37539:CDS
TTGGGCTTGAGCTTGGGCCT+GGG	0.356283	8.3:+60838809	None:intergenic
GAAGAAACAAAACCGGTTAC+TGG	0.365252	8.3:+60838204	None:intergenic
TGTTTGTTGGGCTTGAGCTT+GGG	0.377692	8.3:+60838803	None:intergenic
CAGGTGATTCATCGGATTGT+TGG	0.389458	8.3:+60838499	None:intergenic
GATTCATCGGATTGTTGGTT+TGG	0.389852	8.3:+60838504	None:intergenic
CACAAAACATGGTTCCTGTA+TGG	0.395588	8.3:-60838314	MS.gene37539:CDS
GTTTGAGGTTGTTATTAAAC+CGG	0.413851	8.3:+60838404	None:intergenic
TTGGGCTTGGGCTTGAACCA+AGG	0.418040	8.3:+60838833	None:intergenic
TGTGTTTGTGTTTATGTTTG+AGG	0.421063	8.3:+60838389	None:intergenic
AGAAACATTGATCTCACTCT+TGG	0.422119	8.3:-60838963	MS.gene37539:CDS
TAGCTGGCTCCGCGTGTTCG+AGG	0.423931	8.3:+60838631	None:intergenic
TTTGGTACAACAGCGTTTGA+TGG	0.425689	8.3:+60838285	None:intergenic
CAAGGCTTTGTTGACTTGCA+TGG	0.428361	8.3:+60838851	None:intergenic
TTGTTTGTTGGGCTTGAGCT+TGG	0.430146	8.3:+60838802	None:intergenic
GTACTTGCTGCAACTGTGCT+TGG	0.438849	8.3:+60838093	None:intergenic
CTGCACATGTGGCAGGCATT+CGG	0.442371	8.3:+60838718	None:intergenic
TTGACTGACATGGCGATGGC+GGG	0.451232	8.3:+60838579	None:intergenic
GCCGATACATCTTCTATCTC+CGG	0.452873	8.3:+60838924	None:intergenic
TGGAGAGCCCAAAGAGGAAC+CGG	0.453461	8.3:-60838943	MS.gene37539:CDS
TGGCAGGCATTCGGATCCTT+CGG	0.454844	8.3:+60838727	None:intergenic
GACGACCATGCACGTGCCAC+CGG	0.472437	8.3:-60838886	MS.gene37539:CDS
ACCACCGTTTCTGTTTCAAC+CGG	0.480270	8.3:-60838423	MS.gene37539:CDS
ACAAAACATGGTTCCTGTAT+GGG	0.488455	8.3:-60838313	MS.gene37539:CDS
TCTACGTAAGCACTGTTTGA+AGG	0.493291	8.3:+60838456	None:intergenic
ACGACCATGCACGTGCCACC+GGG	0.499574	8.3:-60838885	MS.gene37539:CDS
ACATTGGCTAGACCAGTAAC+CGG	0.505647	8.3:-60838216	MS.gene37539:CDS
GGACTTATGTCCGAGTTCTC+GGG	0.506633	8.3:+60838677	None:intergenic
ATCCGAGCTGCACATGTGGC+AGG	0.507450	8.3:+60838711	None:intergenic
GGCGATGGCGGGGACTGTGC+CGG	0.508002	8.3:+60838590	None:intergenic
GCCATCACTGTAGCTCTAGC+TGG	0.509355	8.3:+60838117	None:intergenic
TTGTTGACTTGCATGGACAT+AGG	0.520580	8.3:+60838858	None:intergenic
CCGGTGGCAGCAATGATAGC+TGG	0.522483	8.3:+60838615	None:intergenic
AACCATCGAAGAAACAAAAC+CGG	0.524083	8.3:+60838197	None:intergenic
AACTGAATTGTGGGTTGTTG+AGG	0.526600	8.3:+60838339	None:intergenic
TTTCAGCTGACCCGAGAACT+CGG	0.539737	8.3:-60838687	MS.gene37539:CDS
CCAGCTATCATTGCTGCCAC+CGG	0.541439	8.3:-60838615	MS.gene37539:CDS
GGGGACTGTGCCGGTTCCGG+TGG	0.542094	8.3:+60838599	None:intergenic
TCAAACGCTGTTGTACCAAA+CGG	0.547610	8.3:-60838282	MS.gene37539:CDS
CCAGCGAATTGTTTCGCCAT+CGG	0.548505	8.3:+60838656	None:intergenic
TATCCCCGGTGGCACGTGCA+TGG	0.548763	8.3:+60838881	None:intergenic
CACACAAAAGTCGAGGGTCG+AGG	0.552285	8.3:-60838750	MS.gene37539:CDS
TAAACCGGTTGAAACAGAAA+CGG	0.564370	8.3:+60838419	None:intergenic
TTTGATGGTATAGCCCATAC+AGG	0.566203	8.3:+60838300	None:intergenic
ACCGGAGATAGAAGATGTAT+CGG	0.574983	8.3:-60838925	MS.gene37539:CDS
AAGTCGAGGGTCGAGGCCGA+AGG	0.575723	8.3:-60838743	MS.gene37539:CDS
GGTGGCACGTGCATGGTCGT+CGG	0.576568	8.3:+60838888	None:intergenic
CATGCAAGTCAACAAAGCCT+TGG	0.580583	8.3:-60838850	MS.gene37539:CDS
TGCATGGACATAGGTATCCC+CGG	0.581741	8.3:+60838867	None:intergenic
TGACTGACATGGCGATGGCG+GGG	0.586914	8.3:+60838580	None:intergenic
AATTCAGTTACCACAAAACA+TGG	0.589831	8.3:-60838325	MS.gene37539:CDS
TGCCTGCCACATGTGCAGCT+CGG	0.589961	8.3:-60838713	MS.gene37539:CDS
AAAGATCCGAGCTGCACATG+TGG	0.591484	8.3:+60838707	None:intergenic
GTTGACTGACATGGCGATGG+CGG	0.598518	8.3:+60838578	None:intergenic
GAGTGTGCCGTTGACTGACA+TGG	0.602740	8.3:+60838569	None:intergenic
CCGATGGCGAAACAATTCGC+TGG	0.602854	8.3:-60838656	MS.gene37539:CDS
CACTCTTGGAGAGCCCAAAG+AGG	0.605171	8.3:-60838949	MS.gene37539:CDS
AAGAGCTTCAGTTATTATCA+CGG	0.616423	8.3:-60838026	MS.gene37539:CDS
GCCGTTGACTGACATGGCGA+TGG	0.617587	8.3:+60838575	None:intergenic
TCGCTGGCTCCTCGAACACG+CGG	0.627039	8.3:-60838640	MS.gene37539:CDS
TCAAGCCCAAGCCCAAACCC+AGG	0.628129	8.3:-60838826	MS.gene37539:CDS
GCCATCGCCATGTCAGTCAA+CGG	0.630285	8.3:-60838576	MS.gene37539:CDS
AGACCGTCACACAAAAGTCG+AGG	0.630312	8.3:-60838757	MS.gene37539:CDS
TCCAGCTAGAGCTACAGTGA+TGG	0.641074	8.3:-60838118	MS.gene37539:CDS
GACCGTCACACAAAAGTCGA+GGG	0.645442	8.3:-60838756	MS.gene37539:CDS
GAACTCGGACATAAGTCCGA+TGG	0.654955	8.3:-60838672	MS.gene37539:CDS
ACCGGTTGAAACAGAAACGG+TGG	0.684445	8.3:+60838422	None:intergenic
CGACCATGCACGTGCCACCG+GGG	0.715963	8.3:-60838884	MS.gene37539:CDS
ATGGACATAGGTATCCCCGG+TGG	0.809498	8.3:+60838870	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCTCTTTTGAATTGTTTGT+TGG	+	chr8.3:60838202-60838221	None:intergenic	25.0%
!!	TCTCTTTTGAATTGTTTGTT+GGG	+	chr8.3:60838201-60838220	None:intergenic	25.0%
	AAGAGCTTCAGTTATTATCA+CGG	-	chr8.3:60838963-60838982	MS.gene37539:CDS	30.0%
	AATTCAGTTACCACAAAACA+TGG	-	chr8.3:60838664-60838683	MS.gene37539:CDS	30.0%
	TGTGTTTGTGTTTATGTTTG+AGG	+	chr8.3:60838603-60838622	None:intergenic	30.0%
!	GATGTTGAGAGATTTTTCAT+TGG	-	chr8.3:60838925-60838944	MS.gene37539:CDS	30.0%
!	GTTTGAGGTTGTTATTAAAC+CGG	+	chr8.3:60838588-60838607	None:intergenic	30.0%
!	TTTTGTGGTAACTGAATTGT+GGG	+	chr8.3:60838662-60838681	None:intergenic	30.0%
!!	AAAAACTGTGGTTGATTTGT+TGG	+	chr8.3:60838752-60838771	None:intergenic	30.0%
!!	ACGAAAAAAGTATTTCCGTT+TGG	+	chr8.3:60838725-60838744	None:intergenic	30.0%
!!!	TCAACCACAGTTTTTTACAT+TGG	-	chr8.3:60838757-60838776	MS.gene37539:CDS	30.0%
	AACCATCGAAGAAACAAAAC+CGG	+	chr8.3:60838795-60838814	None:intergenic	35.0%
	ACAAAACATGGTTCCTGTAT+GGG	-	chr8.3:60838676-60838695	MS.gene37539:CDS	35.0%
	AGAAACATTGATCTCACTCT+TGG	-	chr8.3:60838026-60838045	MS.gene37539:CDS	35.0%
	CTAGCCAATGTAAAAAACTG+TGG	+	chr8.3:60838764-60838783	None:intergenic	35.0%
	GTTGTTGAGGAATTAGGTTT+AGG	+	chr8.3:60838640-60838659	None:intergenic	35.0%
	TAAACCGGTTGAAACAGAAA+CGG	+	chr8.3:60838573-60838592	None:intergenic	35.0%
!	CGTTTACGTTTCTTTTTCTC+AGG	+	chr8.3:60838512-60838531	None:intergenic	35.0%
!	CTTTTTCTCAGGTGATTCAT+CGG	+	chr8.3:60838501-60838520	None:intergenic	35.0%
!	GCTTGTTGAACTTGAATAAC+TGG	+	chr8.3:60838821-60838840	None:intergenic	35.0%
!	GTTTTGTGGTAACTGAATTG+TGG	+	chr8.3:60838663-60838682	None:intergenic	35.0%
!	TGGTTCTTGATTAGGGTTTT+TGG	+	chr8.3:60838468-60838487	None:intergenic	35.0%
!!	GTTGGTTTGGTTCTTGATTA+GGG	+	chr8.3:60838475-60838494	None:intergenic	35.0%
!!	TGTTGGTTTGGTTCTTGATT+AGG	+	chr8.3:60838476-60838495	None:intergenic	35.0%
!!!	TCTTGATTAGGGTTTTTGGT+TGG	+	chr8.3:60838464-60838483	None:intergenic	35.0%
	ACCGGAGATAGAAGATGTAT+CGG	-	chr8.3:60838064-60838083	MS.gene37539:CDS	40.0%
	CACAAAACATGGTTCCTGTA+TGG	-	chr8.3:60838675-60838694	MS.gene37539:CDS	40.0%
	GAAGAAACAAAACCGGTTAC+TGG	+	chr8.3:60838788-60838807	None:intergenic	40.0%
	TCAAACGCTGTTGTACCAAA+CGG	-	chr8.3:60838707-60838726	MS.gene37539:CDS	40.0%
	TTTGGTACAACAGCGTTTGA+TGG	+	chr8.3:60838707-60838726	None:intergenic	40.0%
!	AACTGAATTGTGGGTTGTTG+AGG	+	chr8.3:60838653-60838672	None:intergenic	40.0%
!	CATACAGGAACCATGTTTTG+TGG	+	chr8.3:60838677-60838696	None:intergenic	40.0%
!	GATTCATCGGATTGTTGGTT+TGG	+	chr8.3:60838488-60838507	None:intergenic	40.0%
!	TCTACGTAAGCACTGTTTGA+AGG	+	chr8.3:60838536-60838555	None:intergenic	40.0%
!	TTGTGGGTTGTTGAGGAATT+AGG	+	chr8.3:60838646-60838665	None:intergenic	40.0%
!	TTTGATGGTATAGCCCATAC+AGG	+	chr8.3:60838692-60838711	None:intergenic	40.0%
!	TTTTGTGTGACGGTCTTTTG+TGG	+	chr8.3:60838228-60838247	None:intergenic	40.0%
!!	TTGTTGACTTGCATGGACAT+AGG	+	chr8.3:60838134-60838153	None:intergenic	40.0%
!!!	AACCGGTTTTGTTTCTTCGA+TGG	-	chr8.3:60838790-60838809	MS.gene37539:CDS	40.0%
!!!	ATTAGGGTTTTTGGTTGGTG+AGG	+	chr8.3:60838459-60838478	None:intergenic	40.0%
	ACCACCGTTTCTGTTTCAAC+CGG	-	chr8.3:60838566-60838585	MS.gene37539:CDS	45.0%
	CAGGTGATTCATCGGATTGT+TGG	+	chr8.3:60838493-60838512	None:intergenic	45.0%
	CATGCAAGTCAACAAAGCCT+TGG	-	chr8.3:60838139-60838158	MS.gene37539:CDS	45.0%
	GCCGATACATCTTCTATCTC+CGG	+	chr8.3:60838068-60838087	None:intergenic	45.0%
	TCTATCTCCGGTTCCTCTTT+GGG	+	chr8.3:60838056-60838075	None:intergenic	45.0%
	TTCTATCTCCGGTTCCTCTT+TGG	+	chr8.3:60838057-60838076	None:intergenic	45.0%
!	ACATTGGCTAGACCAGTAAC+CGG	-	chr8.3:60838773-60838792	MS.gene37539:CDS	45.0%
!	CTAGCTGGAGATTTTGTTGC+TGG	+	chr8.3:60838860-60838879	None:intergenic	45.0%
!	TGTTTGTTGGGCTTGAGCTT+GGG	+	chr8.3:60838189-60838208	None:intergenic	45.0%
!	TTGTTTGTTGGGCTTGAGCT+TGG	+	chr8.3:60838190-60838209	None:intergenic	45.0%
!!	CAAGGCTTTGTTGACTTGCA+TGG	+	chr8.3:60838141-60838160	None:intergenic	45.0%
!!!	TTTTGGTTGGTGAGGTGGTT+GGG	+	chr8.3:60838451-60838470	None:intergenic	45.0%
!!!	TTTTTGGTTGGTGAGGTGGT+TGG	+	chr8.3:60838452-60838471	None:intergenic	45.0%
	AAAGATCCGAGCTGCACATG+TGG	+	chr8.3:60838285-60838304	None:intergenic	50.0%
	ACCGGTTGAAACAGAAACGG+TGG	+	chr8.3:60838570-60838589	None:intergenic	50.0%
	AGACCGTCACACAAAAGTCG+AGG	-	chr8.3:60838232-60838251	MS.gene37539:CDS	50.0%
	CCAGCGAATTGTTTCGCCAT+CGG	+	chr8.3:60838336-60838355	None:intergenic	50.0%
	CGGACTTATGTCCGAGTTCT+CGG	+	chr8.3:60838316-60838335	None:intergenic	50.0%
	GAACTCGGACATAAGTCCGA+TGG	-	chr8.3:60838317-60838336	MS.gene37539:CDS	50.0%
	GACCGTCACACAAAAGTCGA+GGG	-	chr8.3:60838233-60838252	MS.gene37539:CDS	50.0%
	GGACTTATGTCCGAGTTCTC+GGG	+	chr8.3:60838315-60838334	None:intergenic	50.0%
	TCCAGCTAGAGCTACAGTGA+TGG	-	chr8.3:60838871-60838890	MS.gene37539:CDS	50.0%
	TGCATGGACATAGGTATCCC+CGG	+	chr8.3:60838125-60838144	None:intergenic	50.0%
	TTTCAGCTGACCCGAGAACT+CGG	-	chr8.3:60838302-60838321	MS.gene37539:CDS	50.0%
!	GACCCTCGACTTTTGTGTGA+CGG	+	chr8.3:60838238-60838257	None:intergenic	50.0%
!	GTACTTGCTGCAACTGTGCT+TGG	+	chr8.3:60838899-60838918	None:intergenic	50.0%
!!!	AGGGTTTTTGGTTGGTGAGG+TGG	+	chr8.3:60838456-60838475	None:intergenic	50.0%
	ATCATTGCTGCCACCGGAAC+CGG	-	chr8.3:60838380-60838399	MS.gene37539:CDS	55.0%
	ATGGACATAGGTATCCCCGG+TGG	+	chr8.3:60838122-60838141	None:intergenic	55.0%
	CACACAAAAGTCGAGGGTCG+AGG	-	chr8.3:60838239-60838258	MS.gene37539:CDS	55.0%
	CACTCTTGGAGAGCCCAAAG+AGG	-	chr8.3:60838040-60838059	MS.gene37539:CDS	55.0%
	CCAGCTATCATTGCTGCCAC+CGG	-	chr8.3:60838374-60838393	MS.gene37539:CDS	55.0%
	CCGATGGCGAAACAATTCGC+TGG	-	chr8.3:60838333-60838352	MS.gene37539:CDS	55.0%
	CTGCACATGTGGCAGGCATT+CGG	+	chr8.3:60838274-60838293	None:intergenic	55.0%
	GCCATCGCCATGTCAGTCAA+CGG	-	chr8.3:60838413-60838432	MS.gene37539:CDS	55.0%
	GTTGACTGACATGGCGATGG+CGG	+	chr8.3:60838414-60838433	None:intergenic	55.0%
	TGGAGAGCCCAAAGAGGAAC+CGG	-	chr8.3:60838046-60838065	MS.gene37539:CDS	55.0%
	TGGCAGGCATTCGGATCCTT+CGG	+	chr8.3:60838265-60838284	None:intergenic	55.0%
	TTGACTGACATGGCGATGGC+GGG	+	chr8.3:60838413-60838432	None:intergenic	55.0%
	TTGAGCTTGGGCCTGGGTTT+GGG	+	chr8.3:60838177-60838196	None:intergenic	55.0%
	TTGGGCTTGGGCTTGAACCA+AGG	+	chr8.3:60838159-60838178	None:intergenic	55.0%
!	GAGTGTGCCGTTGACTGACA+TGG	+	chr8.3:60838423-60838442	None:intergenic	55.0%
!!	GCCATCACTGTAGCTCTAGC+TGG	+	chr8.3:60838875-60838894	None:intergenic	55.0%
	ATCCGAGCTGCACATGTGGC+AGG	+	chr8.3:60838281-60838300	None:intergenic	60.0%
	CCGGTGGCAGCAATGATAGC+TGG	+	chr8.3:60838377-60838396	None:intergenic	60.0%
	CTTGAGCTTGGGCCTGGGTT+TGG	+	chr8.3:60838178-60838197	None:intergenic	60.0%
	TCAAGCCCAAGCCCAAACCC+AGG	-	chr8.3:60838163-60838182	MS.gene37539:CDS	60.0%
	TGACTGACATGGCGATGGCG+GGG	+	chr8.3:60838412-60838431	None:intergenic	60.0%
	TGCCTGCCACATGTGCAGCT+CGG	-	chr8.3:60838276-60838295	MS.gene37539:CDS	60.0%
	TTGGGCCTGGGTTTGGGCTT+GGG	+	chr8.3:60838171-60838190	None:intergenic	60.0%
	TTGGGCTTGAGCTTGGGCCT+GGG	+	chr8.3:60838183-60838202	None:intergenic	60.0%
!	GCCGTTGACTGACATGGCGA+TGG	+	chr8.3:60838417-60838436	None:intergenic	60.0%
	AAGTCGAGGGTCGAGGCCGA+AGG	-	chr8.3:60838246-60838265	MS.gene37539:CDS	65.0%
	ACGACCATGCACGTGCCACC+GGG	-	chr8.3:60838104-60838123	MS.gene37539:CDS	65.0%
	CTTGGGCCTGGGTTTGGGCT+TGG	+	chr8.3:60838172-60838191	None:intergenic	65.0%
	GACGACCATGCACGTGCCAC+CGG	-	chr8.3:60838103-60838122	MS.gene37539:CDS	65.0%
	GGTGGCACGTGCATGGTCGT+CGG	+	chr8.3:60838104-60838123	None:intergenic	65.0%
	GTTGGGCTTGAGCTTGGGCC+TGG	+	chr8.3:60838184-60838203	None:intergenic	65.0%
	TATCCCCGGTGGCACGTGCA+TGG	+	chr8.3:60838111-60838130	None:intergenic	65.0%
!	TAGCTGGCTCCGCGTGTTCG+AGG	+	chr8.3:60838361-60838380	None:intergenic	65.0%
!!	TCGCTGGCTCCTCGAACACG+CGG	-	chr8.3:60838349-60838368	MS.gene37539:CDS	65.0%
	CGACCATGCACGTGCCACCG+GGG	-	chr8.3:60838105-60838124	MS.gene37539:CDS	70.0%
!!	GGCGATGGCGGGGACTGTGC+CGG	+	chr8.3:60838402-60838421	None:intergenic	75.0%
!!	GGCGGGGACTGTGCCGGTTC+CGG	+	chr8.3:60838396-60838415	None:intergenic	75.0%
!!	GGGGACTGTGCCGGTTCCGG+TGG	+	chr8.3:60838393-60838412	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	60838008	60839003	60838008	ID=MS.gene37539
chr8.3	mRNA	60838008	60839003	60838008	ID=MS.gene37539.t1;Parent=MS.gene37539
chr8.3	exon	60838008	60839003	60838008	ID=MS.gene37539.t1.exon1;Parent=MS.gene37539.t1
chr8.3	CDS	60838008	60839003	60838008	ID=cds.MS.gene37539.t1;Parent=MS.gene37539.t1

Gene Sequence

>MS.gene37539

ATGGCTGAAGAAAATTCAAGAAACATTGATCTCACTCTTGGAGAGCCCAAAGAGGAACCGGAGATAGAAGATGTATCGGCAATAAAAGTTATGCCGACGACCATGCACGTGCCACCGGGGATACCTATGTCCATGCAAGTCAACAAAGCCTTGGTTCAAGCCCAAGCCCAAACCCAGGCCCAAGCTCAAGCCCAACAAACAATTCAAAAGAGATCATCCACAAAAGACCGTCACACAAAAGTCGAGGGTCGAGGCCGAAGGATCCGAATGCCTGCCACATGTGCAGCTCGGATCTTTCAGCTGACCCGAGAACTCGGACATAAGTCCGATGGCGAAACAATTCGCTGGCTCCTCGAACACGCGGAGCCAGCTATCATTGCTGCCACCGGAACCGGCACAGTCCCCGCCATCGCCATGTCAGTCAACGGCACACTCAAAATCCCAACCACCTCACCAACCAAAAACCCTAATCAAGAACCAAACCAACAATCCGATGAATCACCTGAGAAAAAGAAACGTAAACGACCTTCAAACAGTGCTTACGTAGATATAAACGACACCACCGTTTCTGTTTCAACCGGTTTAATAACAACCTCAAACATAAACACAAACACAAACACAAACACAAACCTAAACCTAATTCCTCAACAACCCACAATTCAGTTACCACAAAACATGGTTCCTGTATGGGCTATACCATCAAACGCTGTTGTACCAAACGGAAATACTTTTTTCGTTGTTCCAACAAATCAACCACAGTTTTTTACATTGGCTAGACCAGTAACCGGTTTTGTTTCTTCGATGGTTACACCAGTTATTCAAGTTCAACAAGCTTCATGTTCATTATCTCCAGCAACAAAATCTCCAGCTAGAGCTACAGTGATGGCTCCAAGCACAGTTGCAGCAAGTACAACTCAGATGTTGAGAGATTTTTCATTGGAGATTTATGATAGACAAGAGCTTCAGTTATTATCACGGTCTTCTTCAAAGCATTGA

Protein sequence

>MS.gene37539.t1

MAEENSRNIDLTLGEPKEEPEIEDVSAIKVMPTTMHVPPGIPMSMQVNKALVQAQAQTQAQAQAQQTIQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPTKNPNQEPNQQSDESPEKKKRKRPSNSAYVDINDTTVSVSTGLITTSNINTNTNTNTNLNLIPQQPTIQLPQNMVPVWAIPSNAVVPNGNTFFVVPTNQPQFFTLARPVTGFVSSMVTPVIQVQQASCSLSPATKSPARATVMAPSTVAASTTQMLRDFSLEIYDRQELQLLSRSSSKH